UROGENDECARBOX-RXN

Reaction UROGENDECARBOX-RXN

• common-name:
  • uroporphyrinogen decarboxylase
• direction:
  • left-to-right
• ec-number:
  • ec-4.1.1.37

Reaction formula

• 4 PROTON[c] + 1 UROPORPHYRINOGEN-III[c] => 4 CARBON-DIOXIDE[c] + 1 COPROPORPHYRINOGEN_III[c]

Gene(s) associated with this reaction

• Gene: g13187.t1
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: g13190.t1
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: g11592.t1
  • Category: annotation
    • Source: cladosiphon_okamuranus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_saccharina_japonica, Tool: pantograph, Assignment: n.a, Comment: n.a

Pathway(s)

• HEMESYN2-PWY, heme b biosynthesis II (oxygen-independent):
  • 3 reactions found over 4 reactions in the full pathway
• PWY-7766, heme b biosynthesis IV (Gram-positive bacteria):
  • 3 reactions found over 5 reactions in the full pathway
• PWY0-1415, superpathway of heme b biosynthesis from uroporphyrinogen-III:
  • 5 reactions found over n.a reactions in the full pathway
• PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent):
  • 5 reactions found over 9 reactions in the full pathway
• CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent):
  • 6 reactions found over 9 reactions in the full pathway
• PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic):
  • 4 reactions found over 9 reactions in the full pathway
• HEME-BIOSYNTHESIS-II, heme b biosynthesis I (aerobic):
  • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

• category: orthology; source: output_pantograph_saccharina_japonica; tool: pantograph; comment: n.a
• category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
• category: annotation; source: cladosiphon_okamuranus; tool: pathwaytools; comment: n.a
• category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a

External links

• METANETX-RXN : MNXR105140
• RHEA:
  • 19866
• LIGAND-RXN:
  • R03197
• UNIPROT:
  • P06132
  • P16891
  • P32395
  • Q9PN54
  • Q9JV52
  • P29680
  • P32347
  • P32920
  • P54224
  • O81220
  • P70697