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            <gene reference="E_subulatus_00709"/>
            <gene reference="E_subulatus_11383"/>
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        </geneAssociation>
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          </or>
        </geneAssociation>
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          </or>
        </geneAssociation>
        <geneAssociation id="ga_8" reaction="R_1__46__1__46__1__46__8__45__RXN">
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        <geneAssociation id="ga_9" reaction="R_1__46__1__46__3__46__37__45__RXN">
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        </geneAssociation>
        <geneAssociation id="ga_10" reaction="R_1__46__10__46__2__46__2__45__RXN">
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        </geneAssociation>
        <geneAssociation id="ga_11" reaction="R_1__46__11__46__1__46__12__45__RXN">
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          </or>
        </geneAssociation>
        <geneAssociation id="ga_12" reaction="R_1__46__11__46__1__46__15__45__RXN">
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            <gene reference="E_subulatus_08800"/>
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        <geneAssociation id="ga_13" reaction="R_1__46__14__46__11__46__2__45__RXN">
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        <geneAssociation id="ga_14" reaction="R_1__46__14__46__13__46__79__45__RXN">
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        </geneAssociation>
        <geneAssociation id="ga_18" reaction="R_1__46__18__46__1__46__2__45__RXN">
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        <geneAssociation id="ga_19" reaction="R_1__46__2__46__1__46__18__45__RXN">
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        <geneAssociation id="ga_20" reaction="R_1__46__2__46__1__46__2__45__RXN">
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        <geneAssociation id="ga_24" reaction="R_1__46__2__46__4__46__4__45__RXN">
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        <geneAssociation id="ga_25" reaction="R_1__46__3__46__1__46__9__45__RXN">
          <or>
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        </geneAssociation>
        <geneAssociation id="ga_26" reaction="R_1__46__3__46__7__46__4__45__RXN">
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    <listOfSpecies>
      <species metaid="M_ASCORBATE_c" id="M_ASCORBATE_c" name="L-ascorbate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H7O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 175.1167</p>
            <p>smiles: [H][C@@]1(OC(=O)C(O)=C1[O-])[C@@H](O)CO</p>
            <p>inchikey: CIWBSHSKHKDKBQ-JLAZNSOCSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ASCORBATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H8O6/c7-1-2(8)5-3(9)4(10)6(11)12-5/h2,5,7-10H,1H2/p-1/t2-,5+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_HYDROGEN__45__PEROXIDE_c" id="M_HYDROGEN__45__PEROXIDE_c" name="hydrogen peroxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 34.0147</p>
            <p>smiles: [H]OO[H]</p>
            <p>inchikey: MHAJPDPJQMAIIY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HYDROGEN__45__PEROXIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O2/c1-2/h1-2H"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PROTON_c" id="M_PROTON_c" name="H+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="H">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1.00739</p>
            <p>smiles: [H+]</p>
            <p>inchikey: GPRLSGONYQIRFK-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PROTON_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__318_c" id="M_CPD__45__318_c" name="monodehydroascorbate radical" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H6O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.1088</p>
            <p>smiles: [H][C@@]1(OC(=O)C([O-])=C1[O])[C@@H](O)CO</p>
            <p>inchikey: LHFJOBMTAJJOTB-JLAZNSOCSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__318_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H7O6/c7-1-2(8)5-3(9)4(10)6(11)12-5/h2,5,7-8,10H,1H2/p-1/t2-,5+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_WATER_c" id="M_WATER_c" name="H2O" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 18.0153</p>
            <p>smiles: [H]O[H]</p>
            <p>inchikey: XLYOFNOQVPJJNP-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_WATER_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O/h1H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__DEHYDRO__45__ASCORBATE_c" id="M_L__45__DEHYDRO__45__ASCORBATE_c" name="L-dehydro-ascorbate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H5O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 173.1008</p>
            <p>smiles: OC[C@H](O)[C-]1OC(=O)C(=O)C1=O</p>
            <p>inchikey: OESHPIGALOBJLM-REOHCLBHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__DEHYDRO__45__ASCORBATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H5O6/c7-1-2(8)5-3(9)4(10)6(11)12-5/h2,7-8H,1H2/q-1/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_OXYGEN__45__MOLECULE_c" id="M_OXYGEN__45__MOLECULE_c" name="oxygen" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 31.9988</p>
            <p>smiles: O=O</p>
            <p>inchikey: MYMOFIZGZYHOMD-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OXYGEN__45__MOLECULE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/O2/c1-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NADH_c" id="M_NADH_c" name="NADH" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 663.4262</p>
            <p>smiles: NC(=O)C1=CN(C=CC1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: BOPGDPNILDQYTO-NNYOXOHSSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NADH_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C21H29N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1,3-4,7-8,10-11,13-16,20-21,29-32H,2,5-6H2,(H2,23,33)(H,34,35)(H,36,37)(H2,22,24,25)/p-2/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CATECHOL_c" id="M_CATECHOL_c" name="catechol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H6O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 110.1106</p>
            <p>smiles: Oc1ccccc1O</p>
            <p>inchikey: YCIMNLLNPGFGHC-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CATECHOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H6O2/c7-5-3-1-2-4-6(5)8/h1-4,7-8H"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NITRITE_c" id="M_NITRITE_c" name="nitrite" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 46.006</p>
            <p>smiles: [O-]N=O</p>
            <p>inchikey: IOVCWXUNBOPUCH-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NITRITE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/HNO2/c2-1-3/h(H,2,3)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NAD_c" id="M_NAD_c" name="NAD+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 662.4177</p>
            <p>smiles: NC(=O)c1ccc[n+](c1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: BAWFJGJZGIEFAR-NNYOXOHSSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NAD_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/p-1/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MALONYL__45__ACP_c" id="M_MALONYL__45__ACP_c" name="a malonyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H2O3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)CC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_BENZENE__45__NO2_c" id="M_BENZENE__45__NO2_c" name="nitrobenzene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 123.1094</p>
            <p>smiles: [O-][N+](=O)c1ccccc1</p>
            <p>inchikey: LQNUZADURLCDLV-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BENZENE__45__NO2_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H5NO2/c8-7(9)6-4-2-1-3-5-6/h1-5H"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__14553_c" id="M_CPD__45__14553_c" name="UDP-&amp;alpha;-D-galactose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 564.287</p>
            <p>smiles: OC[C@H]1O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2ccc(=O)[nH]c2=O)[C@H](O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: HSCJRCZFDFQWRP-ABVWGUQPSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__14553_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C15H24N2O17P2/c18-3-5-8(20)10(22)12(24)14(32-5)33-36(28,29)34-35(26,27)30-4-6-9(21)11(23)13(31-6)17-2-1-7(19)16-15(17)25/h1-2,5-6,8-14,18,20-24H,3-4H2,(H,26,27)(H,28,29)(H,16,19,25)/p-2/t5-,6-,8+,9-,10+,11-,12-,13-,14-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__16494_c" id="M_CPD__45__16494_c" name="a &amp;beta;-D-Gal-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;3)-[&amp;beta;-D-GlcNAc-(1&amp;rarr;6)]-&amp;beta;-D-Gal-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-R" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C36H60N3O26R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](NC(C)=O)[C@H](O[*])O[C@@H]2CO)[C@H](O)[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3O)[C@H](O)[C@H]2NC(C)=O)[C@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_UDP_c" id="M_UDP_c" name="UDP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H11N2O12P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 401.139</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP([O-])(=O)OP([O-])([O-])=O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: XCCTYIAWTASOJW-XVFCMESISA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_UDP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CARBON__45__DIOXIDE_c" id="M_CARBON__45__DIOXIDE_c" name="CO2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 44.0095</p>
            <p>smiles: O=C=O</p>
            <p>inchikey: CURLTUGMZLYLDI-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CARBON__45__DIOXIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CO2/c2-1-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_LUTEOLIN__45__7__45__O__45__BETA__45__D__45__DIGLUCURONIDE_c" id="M_LUTEOLIN__45__7__45__O__45__BETA__45__D__45__DIGLUCURONIDE_c" name="luteolin 7-O-&amp;beta;-D-diglucuronide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C27H23O18">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 635.4624</p>
            <p>smiles: O[C@@H]1[C@@H](O)[C@H](O[C@@H]2[C@@H](O)[C@H](O)[C@H](O[C@H]2Oc2cc([O-])c3c(c2)oc(cc3=O)-c2ccc(O)c(O)c2)C([O-])=O)O[C@@H]([C@H]1O)C([O-])=O</p>
            <p>inchikey: PBBVWJQPAZYQDB-DBFWEQBMSA-K</p>
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            <rdf:Description rdf:about="#M_LUTEOLIN__45__7__45__O__45__BETA__45__D__45__DIGLUCURONIDE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_a__45__radical__45__of__45__luteolin__45__7__45__iOi__45__diglucuronid_c" id="M_a__45__radical__45__of__45__luteolin__45__7__45__iOi__45__diglucuronid_c" name="a radical of luteolin-7-O-diglucuronide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C27H22O18">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 634.4544</p>
            <p>smiles: [O]c1ccc(cc1[O-])-c1cc(=O)c2c(O)cc(OC3O[C@@H]([C@@H](O)[C@H](O)[C@H]3O[C@@H]3O[C@@H]([C@@H](O)[C@H](O)[C@H]3O)C([O-])=O)C([O-])=O)cc2o1</p>
            <p>inchikey: GBZWMUPVORAWBY-HBUFFLJYSA-K</p>
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        <annotation>
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            <rdf:Description rdf:about="#M_a__45__radical__45__of__45__luteolin__45__7__45__iOi__45__diglucuronid_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C27H25O18/c28-9-2-1-7(3-10(9)29)13-6-12(31)15-11(30)4-8(5-14(15)42-13)41-27-23(19(35)18(34)22(44-27)25(39)40)45-26-20(36)16(32)17(33)21(43-26)24(37)38/h1-6,16-23,26-27,29-30,32-36H,(H,37,38)(H,39,40)/p-3/t16-,17-,18-,19-,20+,21-,22-,23+,26-,27?/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_CPD__45__15318_c" id="M_CPD__45__15318_c" name="CPD-15318" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.095</p>
            <p>smiles: O[C@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: KTVPXOYAKDPRHY-AIHAYLRMSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15318_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_CPD__45__16551_c" id="M_CPD__45__16551_c" name="CPD-16551" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.095</p>
            <p>smiles: O[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: KTVPXOYAKDPRHY-TXICZTDVSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__16551_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_O__45__SUCCINYL__45__L__45__HOMOSERINE_c" id="M_O__45__SUCCINYL__45__L__45__HOMOSERINE_c" name="O-succinyl-L-homoserine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H12NO6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 218.1845</p>
            <p>smiles: [NH3+][C@@H](CCOC(=O)CCC([O-])=O)C([O-])=O</p>
            <p>inchikey: GNISQJGXJIDKDJ-YFKPBYRVSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_O__45__SUCCINYL__45__L__45__HOMOSERINE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_2__45__OXOBUTANOATE_c" id="M_2__45__OXOBUTANOATE_c" name="2-oxobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 101.0812</p>
            <p>smiles: CCC(=O)C([O-])=O</p>
            <p>inchikey: TYEYBOSBBBHJIV-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2__45__OXOBUTANOATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H6O3/c1-2-3(5)4(6)7/h2H2,1H3,(H,6,7)/p-1"/>
                </rdf:Bag>
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            </rdf:Description>
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      </species>
      <species metaid="M_SUC_c" id="M_SUC_c" name="succinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 116.0733</p>
            <p>smiles: [O-]C(=O)CCC([O-])=O</p>
            <p>inchikey: KDYFGRWQOYBRFD-UHFFFAOYSA-L</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SUC_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H6O4/c5-3(6)1-2-4(7)8/h1-2H2,(H,5,6)(H,7,8)/p-2"/>
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      </species>
      <species metaid="M_AMMONIUM_c" id="M_AMMONIUM_c" name="ammonium" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="H4N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 18.0379</p>
            <p>smiles: [H][N+]([H])([H])[H]</p>
            <p>inchikey: QGZKDVFQNNGYKY-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_AMMONIUM_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H3N/h1H3/p+1"/>
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      <species metaid="M_Pi_c" id="M_Pi_c" name="phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="HO4P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 95.9804</p>
            <p>smiles: OP([O-])([O-])=O</p>
            <p>inchikey: NBIIXXVUZAFLBC-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_Pi_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Protein__45__Tyrosines_c" id="M_Protein__45__Tyrosines_c" name="a [protein]-L-tyrosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H10N2O3R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5__45__10__45__METHENYL__45__THF__45__GLU__45__N_c" id="M_5__45__10__45__METHENYL__45__THF__45__GLU__45__N_c" name="a 5,10-methenyltetrahydrofolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H20N7O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 454.4166</p>
            <p>smiles: [H][C@@]12CN(C=[N+]1c1c(NC2)nc(N)[nH]c1=O)c1ccc(cc1)C(=O)N[C@@H](CCC([O-])=O)C([O-])=O</p>
            <p>inchikey: MEANFMOQMXYMCT-OLZOCXBDSA-M</p>
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        <annotation>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_FORMYL__45__THF__45__GLU__45__N_c" id="M_FORMYL__45__THF__45__GLU__45__N_c" name="a 10-formyltetrahydrofolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Protein__45__tyrosine__45__phosphates_c" id="M_Protein__45__tyrosine__45__phosphates_c" name="a [protein]-L-tyrosine phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H10N2O6PR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Elongation__45__tRNAMet_c" id="M_Elongation__45__tRNAMet_c" name="elongator tRNAMet" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_MET_c" id="M_MET_c" name="L-methionine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 149.211</p>
            <p>smiles: CSCC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: FFEARJCKVFRZRR-BYPYZUCNSA-N</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_MET_c">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 503.1515</p>
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        <annotation>
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            <rdf:Description rdf:about="#M_ATP_c">
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      <species metaid="M_Charged__45__MET__45__tRNAs_c" id="M_Charged__45__MET__45__tRNAs_c" name="an L-methionyl-[elongator tRNAMet]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_PPI_c" id="M_PPI_c" name="diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="HO7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.9529</p>
            <p>smiles: OP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: XPPKVPWEQAFLFU-UHFFFAOYSA-K</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 345.2064</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: UDMBCSSLTHHNCD-KQYNXXCUSA-L</p>
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      <species metaid="M_PROTOHEME_c" id="M_PROTOHEME_c" name="protoheme" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C34H30FeN4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 614.472</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: OC1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H](O)[C@H]1O</p>
            <p>inchikey: NBSCHQHZLSJFNQ-GASJEMHNSA-L</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 256.1051</p>
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      <species metaid="M_NADP_c" id="M_NADP_c" name="NADP+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C21H25N7O17P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 740.3828</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 741.3913</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: OC[C@H]1O[C@H](OP([O-])([O-])=O)[C@H](O)[C@@H](O)[C@@H]1O</p>
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      <species metaid="M_ADP__45__D__45__GLUCOSE_c" id="M_ADP__45__D__45__GLUCOSE_c" name="ADP-&amp;alpha;-D-glucose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 587.3269</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@H]1O</p>
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      <species metaid="M_CPD__45__6701_c" id="M_CPD__45__6701_c" name="1D-myo-inositol 5-monophosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
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      </species>
      <species metaid="M_MYO__45__INOSITOL_c" id="M_MYO__45__INOSITOL_c" name="myo-inositol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: CDAISMWEOUEBRE-GPIVLXJGSA-N</p>
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            <rdf:Description rdf:about="#M_MYO__45__INOSITOL_c">
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      <species metaid="M_CPD__45__6702_c" id="M_CPD__45__6702_c" name="1D-myo-inositol 6-monophosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: O[C@@H]1[C@@H](O)[C@H](O)[C@@H](OP([O-])([O-])=O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: INAPMGSXUVUWAF-XCMZKKERSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__6702_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H13O9P/c7-1-2(8)4(10)6(5(11)3(1)9)15-16(12,13)14/h1-11H,(H2,12,13,14)/p-2/t1-,2-,3-,4+,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__1107_c" id="M_CPD__45__1107_c" name="D-myo-inositol 1,3,4,5,6-pentakisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-10" fbc:chemicalFormula="C6H7O21P5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 569.9815</p>
            <p>smiles: O[C@@H]1[C@H](OP([O-])([O-])=O)[C@@H](OP([O-])([O-])=O)[C@H](OP([O-])([O-])=O)[C@@H](OP([O-])([O-])=O)[C@@H]1OP([O-])([O-])=O</p>
            <p>inchikey: CTPQAXVNYGZUAJ-KXXVROSKSA-D</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__1107_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__178_c" id="M_CPD__45__178_c" name="D-myo-inositol (3,4,5,6)-tetrakisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-8" fbc:chemicalFormula="C6H8O18P4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 492.0164</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@H](OP([O-])([O-])=O)[C@@H](OP([O-])([O-])=O)[C@H](OP([O-])([O-])=O)[C@H]1OP([O-])([O-])=O</p>
            <p>inchikey: MRVYFOANPDTYBY-UZAAGFTCSA-F</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__178_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__35__45__BISPH_c" id="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__35__45__BISPH_c" name="1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C11H14O19P3R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@@](COC([*])=O)(COP([O-])(=O)O[C@H]1[C@H](O)[C@@H](OP([O-])([O-])=O)[C@H](O)[C@@H](OP([O-])([O-])=O)[C@H]1O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__5__45__PHOSPHA_c" id="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__5__45__PHOSPHA_c" name="a 1-phosphatidyl-1D-myo-inositol 5-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C11H15O16P2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@@](COC([*])=O)(COP([O-])(=O)O[C@@H]1[C@H](O)[C@H](O)[C@@H](O)[C@H](OP([O-])([O-])=O)[C@H]1O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD1F__45__90_c" id="M_CPD1F__45__90_c" name="kaempferol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H9O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 285.2289</p>
            <p>smiles: Oc1ccc(cc1)-c1oc2cc(O)cc(O)c2c(=O)c1[O-]</p>
            <p>inchikey: IYRMWMYZSQPJKC-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD1F__45__90_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_NITRATE_e" id="M_NITRATE_e" name="nitrate" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 62.0054</p>
            <p>smiles: [O-][N+]([O-])=O</p>
            <p>inchikey: NHNBFGGVMKEFGY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NITRATE_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/NO3/c2-1(3)4/q-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__12575_c" id="M_CPD__45__12575_c" name="UDP-&amp;alpha;-D-glucose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 564.287</p>
            <p>smiles: OC[C@H]1O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2ccc(=O)[nH]c2=O)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: HSCJRCZFDFQWRP-JZMIEXBBSA-L</p>
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        </notes>
        <annotation>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_OXYGEN__45__MOLECULE_e" id="M_OXYGEN__45__MOLECULE_e" name="oxygen" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 31.9988</p>
            <p>smiles: O=O</p>
            <p>inchikey: MYMOFIZGZYHOMD-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OXYGEN__45__MOLECULE_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/O2/c1-2"/>
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      </species>
      <species metaid="M_CPD__45__520_c" id="M_CPD__45__520_c" name="quercetin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H9O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 301.2283</p>
            <p>smiles: Oc1ccc(cc1O)-c1oc2cc([O-])cc(O)c2c(=O)c1O</p>
            <p>inchikey: REFJWTPEDVJJIY-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      </species>
      <species metaid="M_CPD1F__45__437_c" id="M_CPD1F__45__437_c" name="quercetin-3-glucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H19O12">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 463.3689</p>
            <p>smiles: OC[C@H]1O[C@@H](Oc2c(oc3cc([O-])cc(O)c3c2=O)-c2ccc(O)c(O)c2)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: OVSQVDMCBVZWGM-QSOFNFLRSA-M</p>
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        </notes>
        <annotation>
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      <species metaid="M_GALACTOSE_c" id="M_GALACTOSE_c" name="&amp;beta;-D-galactopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: WQZGKKKJIJFFOK-FPRJBGLDSA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_GALACTOSE_c">
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                <rdf:Bag>
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                </rdf:Bag>
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      </species>
      <species metaid="M_ALPHA__45__D__45__GALACTOSE_c" id="M_ALPHA__45__D__45__GALACTOSE_c" name="&amp;alpha;-D-galactopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: WQZGKKKJIJFFOK-PHYPRBDBSA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_ALPHA__45__D__45__GALACTOSE_c">
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        </annotation>
      </species>
      <species metaid="M_PHYTYL__45__PYROPHOSPHATE_c" id="M_PHYTYL__45__PYROPHOSPHATE_c" name="phytyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C20H39O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 453.4686</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC\C(C)=C\COP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: ITPLBNCCPZSWEU-PYDDKJGSSA-K</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_PHYTYL__45__PYROPHOSPHATE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__148_c" id="M_CPD__45__148_c" name="octane" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H18">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 114.2285</p>
            <p>smiles: CCCCCCCC</p>
            <p>inchikey: TVMXDCGIABBOFY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__148_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H18/c1-3-5-7-8-6-4-2/h3-8H2,1-2H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Reduced__45__Rubredoxins_c" id="M_Reduced__45__Rubredoxins_c" name="a reduced rubredoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_SULFATE_e" id="M_SULFATE_e" name="sulfate" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="O4S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 96.064</p>
            <p>smiles: [O-]S([O-])(=O)=O</p>
            <p>inchikey: QAOWNCQODCNURD-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SULFATE_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_OCTANOL_c" id="M_OCTANOL_c" name="1-octanol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H18O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 130.2279</p>
            <p>smiles: CCCCCCCCO</p>
            <p>inchikey: KBPLFHHGFOOTCA-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OCTANOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H18O/c1-2-3-4-5-6-7-8-9/h9H,2-8H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CHLOROPHYLLIDE__45__A_c" id="M_CHLOROPHYLLIDE__45__A_c" name="chlorophyllide a" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C35H32MgN4O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 612.958</p>
            <p>smiles: CCC1=C(C)C2=[N+]3C1=Cc1c(C)c4C(=O)[C-](C(=O)OC)C5=C6[C@@H](CCC([O-])=O)[C@H](C)C7=[N+]6[Mg--]3(n1c45)n1c(=C7)c(C)c(C=C)c1=C2</p>
            <p>inchikey: IZOAGQOHKWGYKF-PVMVIUQGSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CHLOROPHYLLIDE__45__A_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C35H35N4O5.Mg/c1-8-19-15(3)22-12-24-17(5)21(10-11-28(40)41)32(38-24)30-31(35(43)44-7)34(42)29-18(6)25(39-33(29)30)14-27-20(9-2)16(4)23(37-27)13-26(19)36-22;/h8,12-14,17,21H,1,9-11H2,2-7H3,(H3,36,37,38,39,40,41,42);/q-1;+2/p-3/t17-,21-;/m0./s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Oxidized__45__Rubredoxins_c" id="M_Oxidized__45__Rubredoxins_c" name="an oxidized rubredoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CHLOROPHYLL__45__A_c" id="M_CHLOROPHYLL__45__A_c" name="chlorophyll a" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C55H71MgN4O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 892.482</p>
            <p>smiles: CCC1=C(C)C2=Cc3c(C=C)c(C)c4C=C5[C@@H](C)[C@H](CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C6=[N+]5[Mg--]5(n34)n3c(=CC1=[N+]25)c(C)c1C(=O)[C-](C(=O)OC)C6=c31</p>
            <p>inchikey: VSRAJQZEEBBURZ-ONWAGYJKSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CHLOROPHYLL__45__A_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIVINYL__45__PROTOCHLOROPHYLLIDE__45__A_c" id="M_DIVINYL__45__PROTOCHLOROPHYLLIDE__45__A_c" name="3,8-divinyl protochlorophyllide a" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C35H28MgN4O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 608.927</p>
            <p>smiles: COC(=O)[C-]1C(=O)c2c(C)c3C=C4C(C=C)=C(C)C5=[N+]4[Mg--]46n3c2C1=C1C(CCC([O-])=O)=C(C)C(C=c2c(C)c(C=C)c(=C5)n42)=[N+]61</p>
            <p>inchikey: JUNIUPXPPBQKSQ-UAVVDGTISA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIVINYL__45__PROTOCHLOROPHYLLIDE__45__A_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C35H31N4O5.Mg/c1-8-19-15(3)22-12-24-17(5)21(10-11-28(40)41)32(38-24)30-31(35(43)44-7)34(42)29-18(6)25(39-33(29)30)14-27-20(9-2)16(4)23(37-27)13-26(19)36-22;/h8-9,12-14H,1-2,10-11H2,3-7H3,(H3,36,37,38,39,40,41,42);/q-1;+2/p-3/b22-12-,23-13-,24-12-,25-14-,26-13-,27-14-,32-30-;"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MONO__45__VINYL__45__PROTOCHLOROPHYLLIDE__45__A_c" id="M_MONO__45__VINYL__45__PROTOCHLOROPHYLLIDE__45__A_c" name="protochlorophyllide a" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C35H30MgN4O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 610.943</p>
            <p>smiles: CCC1=C(C)C2=[N+]3C1=Cc1c(C)c4C(=O)[C-](C(=O)OC)C5=C6C(CCC([O-])=O)=C(C)C7=[N+]6[Mg--]3(n1c45)n1c(=C7)c(C)c(C=C)c1=C2</p>
            <p>inchikey: SSIKFLKOTZKJAG-UAVVDGTISA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MONO__45__VINYL__45__PROTOCHLOROPHYLLIDE__45__A_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C35H33N4O5.Mg/c1-8-19-15(3)22-12-24-17(5)21(10-11-28(40)41)32(38-24)30-31(35(43)44-7)34(42)29-18(6)25(39-33(29)30)14-27-20(9-2)16(4)23(37-27)13-26(19)36-22;/h8,12-14H,1,9-11H2,2-7H3,(H3,36,37,38,39,40,41,42);/q-1;+2/p-3/b22-12-,23-13-,24-12-,25-14-,26-13-,27-14-,32-30-;"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_UDP_e" id="M_UDP_e" name="UDP" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H11N2O12P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 401.139</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP([O-])(=O)OP([O-])([O-])=O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: XCCTYIAWTASOJW-XVFCMESISA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_UDP_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/p-3/t4-,6-,7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__415_c" id="M_CPD__45__415_c" name="a 1-long-chain acyl-glycerone 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Long__45__chain__45__alcohols_c" id="M_Long__45__chain__45__alcohols_c" name="a long-chain alcohol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="HOR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_1__45__ALKYL__45__GLYCERONE__45__3__45__PHOSPHATE_c" id="M_1__45__ALKYL__45__GLYCERONE__45__3__45__PHOSPHATE_c" name="a 1-alkyl-glycerone 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H4O6PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]P([O-])(=O)OCC(=O)CO[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Long__45__Chain__45__Fatty__45__Acids_c" id="M_Long__45__Chain__45__Fatty__45__Acids_c" name="a long-chain fatty acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CO2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_2__45__KETOGLUTARATE_c" id="M_2__45__KETOGLUTARATE_c" name="2-oxoglutarate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H4O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 144.0834</p>
            <p>smiles: [O-]C(=O)CCC(=O)C([O-])=O</p>
            <p>inchikey: KPGXRSRHYNQIFN-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2__45__KETOGLUTARATE_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BIOMASS_c" id="M_BIOMASS_c" name="BIOMASS" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2__45__D__45__THREO__45__HYDROXY__45__3__45__CARBOXY__45__ISOCAPROATE_c" id="M_2__45__D__45__THREO__45__HYDROXY__45__3__45__CARBOXY__45__ISOCAPROATE_c" name="(2R,3S)-3-isopropylmalate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H10O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.1524</p>
            <p>smiles: CC(C)[C@@H]([C@@H](O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: RNQHMTFBUSSBJQ-CRCLSJGQSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2__45__D__45__THREO__45__HYDROXY__45__3__45__CARBOXY__45__ISOCAPROATE_c">
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H12O5/c1-3(2)4(6(9)10)5(8)7(11)12/h3-5,8H,1-2H3,(H,9,10)(H,11,12)/p-2/t4-,5+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2K__45__4CH3__45__PENTANOATE_c" id="M_2K__45__4CH3__45__PENTANOATE_c" name="4-methyl-2-oxopentanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H9O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 129.1344</p>
            <p>smiles: CC(C)CC(=O)C([O-])=O</p>
            <p>inchikey: BKAJNAXTPSGJCU-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2K__45__4CH3__45__PENTANOATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H10O3/c1-4(2)3-5(7)6(8)9/h4H,3H2,1-2H3,(H,8,9)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__11281_c" id="M_CPD__45__11281_c" name="S-sulfanylglutathione" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H16N3O6S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 338.381</p>
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CSS)C(=O)NCC([O-])=O)C([O-])=O</p>
            <p>inchikey: QBOLVLBSUGJHGB-WDSKDSINSA-M</p>
          </body>
        </notes>
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      <species metaid="M_GLUTATHIONE_c" id="M_GLUTATHIONE_c" name="glutathione" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H16N3O6S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 306.316</p>
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CS)C(=O)NCC([O-])=O)C([O-])=O</p>
            <p>inchikey: RWSXRVCMGQZWBV-WDSKDSINSA-M</p>
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      <species metaid="M_SO3_c" id="M_SO3_c" name="sulfite" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 80.064</p>
            <p>smiles: [O-]S([O-])=O</p>
            <p>inchikey: LSNNMFCWUKXFEE-UHFFFAOYSA-L</p>
          </body>
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      <species metaid="M_FARNESYL__45__PP_c" id="M_FARNESYL__45__PP_c" name="(2E,6E)-farnesyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C15H25O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 379.304</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\COP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: VWFJDQUYCIWHTN-YFVJMOTDSA-K</p>
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      <species metaid="M_NADH__45__P__45__OR__45__NOP_c" id="M_NADH__45__P__45__OR__45__NOP_c" name="NAD(P)H" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_SQUALENE_c" id="M_SQUALENE_c" name="squalene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H50">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 410.718</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_3__45__CARBOXY__45__3__45__HYDROXY__45__ISOCAPROATE_c" id="M_3__45__CARBOXY__45__3__45__HYDROXY__45__ISOCAPROATE_c" name="(2S)-2-isopropylmalate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H10O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.1524</p>
            <p>smiles: CC(C)[C@@](O)(CC([O-])=O)C([O-])=O</p>
            <p>inchikey: BITYXLXUCSKTJS-ZETCQYMHSA-L</p>
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            <rdf:Description rdf:about="#M_3__45__CARBOXY__45__3__45__HYDROXY__45__ISOCAPROATE_c">
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      <species metaid="M_CPD1F__45__130_c" id="M_CPD1F__45__130_c" name="zeaxanthin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 568.8714</p>
            <p>smiles: C\C(\C=C\C=C(/C)\C=C\C1=C(C)C[C@@H](O)CC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1=C(C)C[C@@H](O)CC1(C)C</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@@H](COC([*])=O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_D__45__Galactosyl__45__12__45__diacyl__45__glycerols_c" id="M_D__45__Galactosyl__45__12__45__diacyl__45__glycerols_c" name="a 1,2-diacyl-3-O-(&amp;beta;-D-galactopyranosyl)-sn-glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H16O10R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H](OC[C@@H](COC([*])=O)OC([*])=O)[C@H](O)[C@@H](O)[C@H]1O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 342.2965</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 504.4371</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 666.5777</p>
            <p>smiles: OC[C@H]1O[C@@](CO)(O[C@H]2O[C@H](CO[C@H]3O[C@H](CO[C@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)[C@H](O)[C@H](O)[C@H]3O)[C@@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@@H]1O</p>
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      <species metaid="M_GDP__45__MANNOSE_c" id="M_GDP__45__MANNOSE_c" name="GDP-&amp;alpha;-D-mannose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O16P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 603.3263</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]2O)[C@@H](O)[C@H]1O</p>
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      <species metaid="M_DOLICHOLP_c" id="M_DOLICHOLP_c" name="a dolichyl phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__171_c" id="M_CPD__45__171_c" name="a dolichyl &amp;beta;-D-mannosyl phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_GDP_c" id="M_GDP_c" name="GDP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 440.1783</p>
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            <p>inchikey: QGWNDRXFNXRZMB-UUOKFMHZSA-K</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GDP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/p-3/t3-,5-,6-,9-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" id="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" name="UDP-N-acetyl-&amp;alpha;-D-glucosamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C17H25N3O17P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 605.3389</p>
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1OP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: LFTYTUAZOPRMMI-CFRASDGPSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C17H27N3O17P2/c1-6(22)18-10-13(26)11(24)7(4-21)35-16(10)36-39(31,32)37-38(29,30)33-5-8-12(25)14(27)15(34-8)20-3-2-9(23)19-17(20)28/h2-3,7-8,10-16,21,24-27H,4-5H2,1H3,(H,18,22)(H,29,30)(H,31,32)(H,19,23,28)/p-2/t7-,8-,10-,11-,12-,13-,14-,15-,16-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Protein__45__L__45__Asparagine_c" id="M_Protein__45__L__45__Asparagine_c" name="a [protein]-L-asparagine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6N2O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: NC(=O)CC(N*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__8541_c" id="M_CPD__45__8541_c" name="a [protein]-N4-(N-acetyl-&amp;beta;-D-glucosaminyl)-L-asparagine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ACP_c" id="M_ACP_c" name="a soluble [acyl-carrier protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="HSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Dodecanoyl__45__ACPs_c" id="M_Dodecanoyl__45__ACPs_c" name="a dodecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C23H43N2O8PRS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_R__45__3__45__hydroxymyristoyl__45__ACPs_c" id="M_R__45__3__45__hydroxymyristoyl__45__ACPs_c" name="a (3R)-3-hydroxytetradecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C25H47N2O9PRS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3__45__oxo__45__myristoyl__45__ACPs_c" id="M_3__45__oxo__45__myristoyl__45__ACPs_c" name="a 3-oxotetradecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H25O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCC(=O)CC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Tetradec__45__2__45__enoyl__45__ACPs_c" id="M_Tetradec__45__2__45__enoyl__45__ACPs_c" name="a (2E)-tetradec-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H25OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCC\C=C\C(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_NITRATE_c" id="M_NITRATE_c" name="nitrate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 62.0054</p>
            <p>smiles: [O-][N+]([O-])=O</p>
            <p>inchikey: NHNBFGGVMKEFGY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NITRATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/NO3/c2-1(3)4/q-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Myristoyl__45__ACPs_c" id="M_Myristoyl__45__ACPs_c" name="a myristoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H27OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCCC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_3__45__oxo__45__palmitoyl__45__ACPs_c" id="M_3__45__oxo__45__palmitoyl__45__ACPs_c" name="a 3-oxohexadecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H29O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCCC(=O)CC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Beta__45__D__45__Mannosides_c" id="M_Beta__45__D__45__Mannosides_c" name="a &amp;beta;-D-mannoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__12601_c" id="M_CPD__45__12601_c" name="&amp;beta;-D-mannopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H]1O[C@@H](O)[C@@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: WQZGKKKJIJFFOK-RWOPYEJCSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__12601_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Non__45__Glycosylated__45__sugar__45__Acceptors_c" id="M_Non__45__Glycosylated__45__sugar__45__Acceptors_c" name="a non glycosylated sugar acceptor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="HOR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Beta__45__D__45__fucosides_c" id="M_Beta__45__D__45__fucosides_c" name="a &amp;beta;-D fucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O5R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[C@H]1O[C@@H](O[*])[C@H](O)[C@@H](O)[C@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__13293_c" id="M_CPD__45__13293_c" name="&amp;beta;-D-fucose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 164.1565</p>
            <p>smiles: C[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: SHZGCJCMOBCMKK-FPRJBGLDSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__13293_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Non__45__Fucosylated__45__Fucose__45__Acceptors_c" id="M_Non__45__Fucosylated__45__Fucose__45__Acceptors_c" name="a non fucosylated fucose acceptor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="HOR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_NITRATE_C_v" id="M_NITRATE_C_v" name="nitrate" compartment="C_v" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 62.0054</p>
            <p>smiles: [O-][N+]([O-])=O</p>
            <p>inchikey: NHNBFGGVMKEFGY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NITRATE_C_v">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/NO3/c2-1(3)4/q-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_1__45__3__45__beta__45__D__45__Glucans_c" id="M_1__45__3__45__beta__45__D__45__Glucans_c" name="a 1,3-&amp;beta;-D-glucan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Glucopyranose_c" id="M_Glucopyranose_c" name="D-glucopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PYRIDOXAMINE_c" id="M_PYRIDOXAMINE_c" name="pyridoxamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C8H13N2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 169.2005</p>
            <p>smiles: Cc1ncc(CO)c(C[NH3+])c1O</p>
            <p>inchikey: NHZMQXZHNVQTQA-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PYRIDOXAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H12N2O2/c1-5-8(12)7(2-9)6(4-11)3-10-5/h3,11-12H,2,4,9H2,1H3/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ADP_c" id="M_ADP_c" name="ADP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 424.1789</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XTWYTFMLZFPYCI-KQYNXXCUSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ADP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/p-3/t4-,6-,7-,10-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PYRIDOXAMINE__45__5P_c" id="M_PYRIDOXAMINE__45__5P_c" name="pyridoxamine 5&apos;-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H12N2O5P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 247.1656</p>
            <p>smiles: Cc1ncc(COP([O-])([O-])=O)c(C[NH3+])c1O</p>
            <p>inchikey: ZMJGSOSNSPKHNH-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PYRIDOXAMINE__45__5P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H13N2O5P/c1-5-8(11)7(2-9)6(3-10-5)4-15-16(12,13)14/h3,11H,2,4,9H2,1H3,(H2,12,13,14)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PPI_C_x" id="M_PPI_C_x" name="diphosphate" compartment="C_x" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="HO7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.9529</p>
            <p>smiles: OP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: XPPKVPWEQAFLFU-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PPI_C_x">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)/p-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__30_c" id="M_CPD__45__30_c" name="4-acetamidobutanal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 129.157</p>
            <p>smiles: [H]C(=O)CCCNC(C)=O</p>
            <p>inchikey: DDSLGZOYEPKPSJ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__30_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H11NO2/c1-6(9)7-4-2-3-5-8/h5H,2-4H2,1H3,(H,7,9)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__35_c" id="M_CPD__45__35_c" name="4-acetamidobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H10NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 144.149</p>
            <p>smiles: CC(=O)NCCCC([O-])=O</p>
            <p>inchikey: UZTFMUBKZQVKLK-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__35_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H11NO3/c1-5(8)7-4-2-3-6(9)10/h2-4H2,1H3,(H,7,8)(H,9,10)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GERANYLGERANYL__45__PP_c" id="M_GERANYLGERANYL__45__PP_c" name="geranylgeranyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C20H33O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 447.421</p>
            <p>smiles: CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: OINNEUNVOZHBOX-QIRCYJPOSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GERANYLGERANYL__45__PP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H36O7P2/c1-17(2)9-6-10-18(3)11-7-12-19(4)13-8-14-20(5)15-16-26-29(24,25)27-28(21,22)23/h9,11,13,15H,6-8,10,12,14,16H2,1-5H3,(H,24,25)(H2,21,22,23)/p-3/b18-11+,19-13+,20-15+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CAAL__45__proteins_c" id="M_CAAL__45__proteins_c" name="a protein that ends with a CaaL sequence" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Geranylgeranylated__45__CAAL__45__proteins_c" id="M_Geranylgeranylated__45__CAAL__45__proteins_c" name="a geranylgeranylated protein that ends with a CaaL sequence" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Nucleoside__45__Diphosphates_c" id="M_Nucleoside__45__Diphosphates_c" name="a nucleoside diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C5H8O10P2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@@H]1[C@H](O)[C@@H](COP([O-])(=O)OP([O-])([O-])=O)O[C@H]1[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Nucleoside__45__Monophosphates_c" id="M_Nucleoside__45__Monophosphates_c" name="a nucleoside 5&apos;-monophosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H8O7PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@@H]1[C@H](O)[C@@H](COP([O-])([O-])=O)O[C@H]1[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_General__45__Protein__45__Substrates_c" id="M_General__45__Protein__45__Substrates_c" name="a protein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ATP_C_x" id="M_ATP_C_x" name="ATP" compartment="C_x" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O13P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 503.1515</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: ZKHQWZAMYRWXGA-KQYNXXCUSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ATP_C_x">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/p-4/t4-,6-,7-,10-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__LACTATE_c" id="M_D__45__LACTATE_c" name="(R)-lactate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 89.0705</p>
            <p>smiles: C[C@@H](O)C([O-])=O</p>
            <p>inchikey: JVTAAEKCZFNVCJ-UWTATZPHSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_D__45__LACTATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H6O3/c1-2(4)3(5)6/h2,4H,1H3,(H,5,6)/p-1/t2-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PYRUVATE_c" id="M_PYRUVATE_c" name="pyruvate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H3O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 87.0547</p>
            <p>smiles: CC(=O)C([O-])=O</p>
            <p>inchikey: LCTONWCANYUPML-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PYRUVATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H4O3/c1-2(4)3(5)6/h1H3,(H,5,6)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15895_c" id="M_CPD__45__15895_c" name="CPD-15895" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.095</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@@H](O)C=O</p>
            <p>inchikey: PPQRONHOSHZGFQ-LMVFSUKVSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15895_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h1,3-5,7-9H,2H2,(H2,10,11,12)/p-2/t3-,4+,5-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_HS_c" id="M_HS_c" name="hydrogen sulfide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="HS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 33.073</p>
            <p>smiles: [S-][H]</p>
            <p>inchikey: RWSOTUBLDIXVET-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HS_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2S/h1H2/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_OXIDIZED__45__GLUTATHIONE_c" id="M_OXIDIZED__45__GLUTATHIONE_c" name="glutathione disulfide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C20H30N6O12S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 610.616</p>
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CSSC[C@H](NC(=O)CC[C@H]([NH3+])C([O-])=O)C(=O)NCC([O-])=O)C(=O)NCC([O-])=O)C([O-])=O</p>
            <p>inchikey: YPZRWBKMTBYPTK-BJDJZHNGSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OXIDIZED__45__GLUTATHIONE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H32N6O12S2/c21-9(19(35)36)1-3-13(27)25-11(17(33)23-5-15(29)30)7-39-40-8-12(18(34)24-6-16(31)32)26-14(28)4-2-10(22)20(37)38/h9-12H,1-8,21-22H2,(H,23,33)(H,24,34)(H,25,27)(H,26,28)(H,29,30)(H,31,32)(H,35,36)(H,37,38)/p-2/t9-,10-,11-,12-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__9612_c" id="M_CPD__45__9612_c" name="caldariellaquinone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H66O2S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 631.07</p>
            <p>smiles: CSC1=C(CCC(C)CCCC(C)CCCC(C)CCCC(C)CCCC(C)CCCC(C)C)C(=O)c2sccc2C1=O</p>
            <p>inchikey: GHRWXPXOBGRSHG-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__9612_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C39H66O2S2/c1-28(2)14-9-15-29(3)16-10-17-30(4)18-11-19-31(5)20-12-21-32(6)22-13-23-33(7)24-25-34-37(41)39-35(26-27-43-39)36(40)38(34)42-8/h26-33H,9-25H2,1-8H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_FUM_c" id="M_FUM_c" name="fumarate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H2O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 114.0574</p>
            <p>smiles: [O-]C(=O)\C=C\C([O-])=O</p>
            <p>inchikey: VZCYOOQTPOCHFL-OWOJBTEDSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FUM_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H4O4/c5-3(6)1-2-4(7)8/h1-2H,(H,5,6)(H,7,8)/p-2/b2-1+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15301_c" id="M_CPD__45__15301_c" name="caldariellaquinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H68O2S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 633.086</p>
            <p>smiles: CSc1c(CCC(C)CCCC(C)CCCC(C)CCCC(C)CCCC(C)CCCC(C)C)c(O)c2sccc2c1O</p>
            <p>inchikey: UVCQOKDZGIAHDG-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15301_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C39H68O2S2/c1-28(2)14-9-15-29(3)16-10-17-30(4)18-11-19-31(5)20-12-21-32(6)22-13-23-33(7)24-25-34-37(41)39-35(26-27-43-39)36(40)38(34)42-8/h26-33,40-41H,9-25H2,1-8H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PROTON_e" id="M_PROTON_e" name="H+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="H">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1.00739</p>
            <p>smiles: [H+]</p>
            <p>inchikey: GPRLSGONYQIRFK-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PROTON_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_E__45___c" id="M_E__45___c" name="E-" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*-]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Plastoquinols_c" id="M_Plastoquinols_c" name="a plastoquinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PLASTOQUINONE_c" id="M_PLASTOQUINONE_c" name="a plastoquinone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Oxidized__45__ferredoxins_e" id="M_Oxidized__45__ferredoxins_e" name="an oxidized ferredoxin [iron-sulfur] cluster" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Reduced__45__ferredoxins_e" id="M_Reduced__45__ferredoxins_e" name="a reduced ferredoxin [iron-sulfur] cluster" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Protein__45__Histidines_c" id="M_Protein__45__Histidines_c" name="a [protein]-L-histidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8N4O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_23__45__DIPHOSPHOGLYCERATE_c" id="M_23__45__DIPHOSPHOGLYCERATE_c" name="2,3-diphospho-D-glycerate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C3H3O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 261.0002</p>
            <p>smiles: [O-]C(=O)[C@@H](COP([O-])([O-])=O)OP([O-])([O-])=O</p>
            <p>inchikey: XOHUEYCVLUUEJJ-UWTATZPHSA-I</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_23__45__DIPHOSPHOGLYCERATE_c">
              <bqbiol:isVersionOf>
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      <species metaid="M_Protein__45__pi__45__phospho__45__L__45__histidines_c" id="M_Protein__45__pi__45__phospho__45__L__45__histidines_c" name="a [protein]-N&amp;pi;-phospho-L-histidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H6N3O4PR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]P([O-])(=O)n1cncc1C[C@H](N*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__16758_c" id="M_CPD__45__16758_c" name="2/3-phospho-D-glycerate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H3O4R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)[C@@H](CO*)O*</p>
          </body>
        </notes>
      </species>
      <species metaid="M_2__45__PG_c" id="M_2__45__PG_c" name="2-phospho-D-glycerate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C3H4O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 183.0351</p>
            <p>smiles: OC[C@@H](OP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: GXIURPTVHJPJLF-UWTATZPHSA-K</p>
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            <rdf:Description rdf:about="#M_2__45__PG_c">
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      <species metaid="M_S__45__ADENOSYLMETHIONINE_c" id="M_S__45__ADENOSYLMETHIONINE_c" name="S-adenosyl-L-methionine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C15H23N6O5S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 399.445</p>
            <p>smiles: C[S+](CC[C@H]([NH3+])C([O-])=O)C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cnc2c(N)ncnc12</p>
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      <species metaid="M_CAFFEOYL__45__COA_c" id="M_CAFFEOYL__45__COA_c" name="trans-caffeoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C30H38N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 925.647</p>
            <p>smiles: [H]C(=CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)c1ccc(O)c(O)c1</p>
            <p>inchikey: QHRGJMIMHCLHRG-ZSELIEHESA-J</p>
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        </notes>
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      <species metaid="M_FERULOYL__45__COA_c" id="M_FERULOYL__45__COA_c" name="trans-feruloyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C31H40N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 939.673</p>
            <p>smiles: COc1cc(C=CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2OP([O-])([O-])=O)n2cnc3c(N)ncnc23)ccc1O</p>
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      <species metaid="M_ADENOSYL__45__HOMO__45__CYS_c" id="M_ADENOSYL__45__HOMO__45__CYS_c" name="S-adenosyl-L-homocysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H20N6O5S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 384.411</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](CSCC[C@H]([NH3+])C([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: ZJUKTBDSGOFHSH-WFMPWKQPSA-N</p>
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            <rdf:Description rdf:about="#M_ADENOSYL__45__HOMO__45__CYS_c">
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                </rdf:Bag>
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      <species metaid="M_UTP_c" id="M_UTP_c" name="UTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H11N2O15P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 480.1115</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: PGAVKCOVUIYSFO-XVFCMESISA-J</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_UTP_c">
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      <species metaid="M_H2CO3_c" id="M_H2CO3_c" name="carbonic acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CH2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD__45__1108_c" id="M_CPD__45__1108_c" name="a 1-phosphatidyl-1D-myo-inositol 4-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C11H15O16P2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@@](COC([*])=O)(COP([O-])(=O)O[C@@H]1[C@H](O)[C@H](O)[C@@H](OP([O-])([O-])=O)[C@H](O)[C@H]1O)OC([*])=O</p>
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      </species>
      <species metaid="M_PROTOPORPHYRIN_IX_c" id="M_PROTOPORPHYRIN_IX_c" name="protoporphyrin IX" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C34H32N4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 560.6434</p>
            <p>smiles: Cc1c(CCC([O-])=O)c2cc3[nH]c(cc4nc(cc5[nH]c(cc1n2)c(C)c5C=C)c(C)c4C=C)c(C)c3CCC([O-])=O</p>
            <p>inchikey: KSFOVUSSGSKXFI-UJJXFSCMSA-L</p>
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            <rdf:Description rdf:about="#M_PROTOPORPHYRIN_IX_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
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      <species metaid="M_L__45__methionyl__45__tRNAfmet_c" id="M_L__45__methionyl__45__tRNAfmet_c" name="an L-methionyl-[initiator tRNAMet]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_THF__45__GLU__45__N_c" id="M_THF__45__GLU__45__N_c" name="a tetrahydrofolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_L__45__1__45__phosphatidyl__45__inositols_c" id="M_L__45__1__45__phosphatidyl__45__inositols_c" name="a 1-phosphatidyl-1D-myo-inositol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_N__45__formyl__45__L__45__methionyl__45__tRNAfmet_c" id="M_N__45__formyl__45__L__45__methionyl__45__tRNAfmet_c" name="an N-formyl-L-methionyl-[initiator tRNAmet]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_FE__43__2_c" id="M_FE__43__2_c" name="Fe2+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Fe">
        <notes>
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            <p>mass: 55.844</p>
            <p>smiles: [Fe++]</p>
            <p>inchikey: CWYNVVGOOAEACU-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_FE__43__2_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Fe/q+2"/>
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      </species>
      <species metaid="M_CPD__45__9925_c" id="M_CPD__45__9925_c" name="1,4-dihydroxy-2-naphthoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C32H38N7O19P3S">
        <notes>
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            <p>mass: 949.668</p>
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        <notes>
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            <p>mass: 805.541</p>
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            <p>mass: 566.691</p>
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        <notes>
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            <p>mass: 763.505</p>
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            <p>mass: 819.568</p>
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            <p>mass: 726.9191</p>
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            <p>mass: 228.1177</p>
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            <p>mass: 849.594</p>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_METHACRYLYL__45__COA_c" id="M_METHACRYLYL__45__COA_c" name="methylacrylyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H36N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 831.579</p>
            <p>smiles: CC(=C)C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: NPALUEYCDZWBOV-NDZSKPAWSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_METHACRYLYL__45__COA_c">
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        </annotation>
      </species>
      <species metaid="M_GLT_c" id="M_GLT_c" name="L-glutamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H8NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 146.1219</p>
            <p>smiles: [NH3+][C@@H](CCC([O-])=O)C([O-])=O</p>
            <p>inchikey: WHUUTDBJXJRKMK-VKHMYHEASA-M</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_GLT_c">
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      <species metaid="M_PRPP_c" id="M_PRPP_c" name="5-phospho-&amp;alpha;-D-ribose 1-diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C5H8O14P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 385.0326</p>
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            <p>inchikey: PQGCEDQWHSBAJP-TXICZTDVSA-I</p>
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        <annotation>
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            <rdf:Description rdf:about="#M_PRPP_c">
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        </annotation>
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      <species metaid="M_GLN_c" id="M_GLN_c" name="L-glutamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 146.1445</p>
            <p>smiles: NC(=O)CC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: ZDXPYRJPNDTMRX-VKHMYHEASA-N</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_GLN_c">
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      <species metaid="M_CPD__45__11939_c" id="M_CPD__45__11939_c" name="3,5-bisdiphosphoinositol-1D-myo-inositol 2,3,4,6-tetrakisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-13" fbc:chemicalFormula="C6H7O30P8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 806.899</p>
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        </notes>
        <annotation>
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              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_NARINGENIN__45__CMPD_c" id="M_NARINGENIN__45__CMPD_c" name="(2S)-naringenin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 272.2528</p>
            <p>smiles: Oc1ccc(cc1)[C@@H]1CC(=O)c2c(O)cc(O)cc2O1</p>
            <p>inchikey: FTVWIRXFELQLPI-ZDUSSCGKSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_NARINGENIN__45__CMPD_c">
              <bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_UREA_c" id="M_UREA_c" name="urea" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4N2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 60.0553</p>
            <p>smiles: NC(N)=O</p>
            <p>inchikey: XSQUKJJJFZCRTK-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_UREA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CH4N2O/c2-1(3)4/h(H4,2,3,4)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_ALLANTOATE_c" id="M_ALLANTOATE_c" name="allantoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H7N4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 175.1233</p>
            <p>smiles: NC(=O)NC(NC(N)=O)C([O-])=O</p>
            <p>inchikey: NUCLJNSWZCHRKL-UHFFFAOYSA-M</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_ALLANTOATE_c">
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                <rdf:Bag>
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      <species metaid="M_CPD__45__1091_c" id="M_CPD__45__1091_c" name="(S)-ureidoglycolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H5N2O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 133.0833</p>
            <p>smiles: NC(=O)N[C@@H](O)C([O-])=O</p>
            <p>inchikey: NWZYYCVIOKVTII-SFOWXEAESA-M</p>
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        </notes>
        <annotation>
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        </annotation>
      </species>
      <species metaid="M_S__45__ALLANTOIN_c" id="M_S__45__ALLANTOIN_c" name="(S)-(+)-allantoin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6N4O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 158.1154</p>
            <p>smiles: NC(=O)N[C@H]1NC(=O)NC1=O</p>
            <p>inchikey: POJWUDADGALRAB-SFOWXEAESA-N</p>
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        </notes>
        <annotation>
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      <species metaid="M_AN__45__ALPHA__45__L__45__FUCOSIDE_c" id="M_AN__45__ALPHA__45__L__45__FUCOSIDE_c" name="&amp;alpha;-L-fucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O5R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[C@@H]1O[C@@H](O[*])[C@@H](O)[C@H](O)[C@@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_cis__45__delta19__45__3__45__hydroxyC38__45__ACPs_c" id="M_cis__45__delta19__45__3__45__hydroxyC38__45__ACPs_c" name="a cis-delta19-3-hydroxyC38:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_cis__45__delta19__45__3__45__oxo__45__C38__45__ACPs_c" id="M_cis__45__delta19__45__3__45__oxo__45__C38__45__ACPs_c" name="a cis-delta19-3-oxo-C38:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_trans__45__D2__45__cis__45__D19__45__C38__45__ACPs_c" id="M_trans__45__D2__45__cis__45__D19__45__C38__45__ACPs_c" name="trans-D2-cis-D19-C38-ACPs" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD1G__45__768_c" id="M_CPD1G__45__768_c" name="6-O-&amp;alpha;-mycolyl-trehalose 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C90H171O16P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1540.286</p>
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            <p>inchikey: GXOBNDAJNVBERI-BGZCIIMLSA-L</p>
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        </notes>
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      <species metaid="M_CPD1G__45__1344_c" id="M_CPD1G__45__1344_c" name="&amp;alpha;, &amp;alpha;&apos;-trehalose 6-&amp;alpha;-mycolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C90H172O13">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1462.3209</p>
            <p>smiles: CCCCCCCCCCCCCCCCCCCCCCCCCCC([C@H](O)CCCCCCCCCCCCCCCC1CC1CCCCCCCCCCC1CC1CCCCCCCCCCCCCCCCCC)C(=O)OC[C@H]1O[C@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: HASPJLRXBAGTID-BGZCIIMLSA-N</p>
          </body>
        </notes>
        <annotation>
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              <bqbiol:isVersionOf>
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              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD1G__45__771_c" id="M_CPD1G__45__771_c" name="6-O-cis-methoxy-mycolyl-trehalose 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C97H187O17P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1656.4873</p>
            <p>smiles: [H]C(C)(CCCCCCCCCCCCCCCCCC)C([H])(CCCCCCCCCCCCCCCCC1([H])CC1([H])CCCCCCCCCCCCCCCCC[C@@]([H])(O)C([H])(CCCCCCCCCCCCCCCCCCCCCCCC)C(=O)OC[C@@]1([H])O[C@]([H])(O[C@@]2([H])O[C@]([H])(COP([O-])([O-])=O)[C@@]([H])(O)[C@]([H])(O)[C@@]2([H])O)[C@]([H])(O)[C@@]([H])(O)[C@]1([H])O)OC</p>
            <p>inchikey: NYSGJFYKJQFMRN-ZVNWTMLTSA-L</p>
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        </notes>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD1G__45__1345_c" id="M_CPD1G__45__1345_c" name="trehalose-cis-methoxy-mono-mycolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C97H188O14">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1578.5222</p>
            <p>smiles: [H]C(C)(CCCCCCCCCCCCCCCCCC)C([H])(CCCCCCCCCCCCCCCCC1([H])CC1([H])CCCCCCCCCCCCCCCCC[C@@]([H])(O)C([H])(CCCCCCCCCCCCCCCCCCCCCCCC)C(=O)OC[C@@]1([H])O[C@]([H])(O[C@@]2([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O)[C@@]2([H])O)[C@]([H])(O)[C@@]([H])(O)[C@]1([H])O)OC</p>
            <p>inchikey: BRQKYADGWZGFAR-ZVNWTMLTSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD1F__45__133_c" id="M_CPD1F__45__133_c" name="violaxanthin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 600.8702</p>
            <p>smiles: C\C(\C=C\C=C(/C)\C=C\[C@@]12O[C@]1(C)C[C@@H](O)CC2(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/[C@@]12O[C@]1(C)C[C@@H](O)CC2(C)C</p>
            <p>inchikey: SZCBXWMUOPQSOX-WVJDLNGLSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        </annotation>
      </species>
      <species metaid="M_CPD__45__8900_c" id="M_CPD__45__8900_c" name="a [protein] N6,N6-dimethyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C8H18N2OR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[NH+](C)CCCC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Protein__45__L__45__lysine_c" id="M_Protein__45__L__45__lysine_c" name="a [protein]-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C7H14N3O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]CCCC[C@H](NC(*)=O)C(=O)N*</p>
          </body>
        </notes>
      </species>
      <species metaid="M_FORMALDEHYDE_c" id="M_FORMALDEHYDE_c" name="formaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CH2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 30.026</p>
            <p>smiles: [H]C([H])=O</p>
            <p>inchikey: WSFSSNUMVMOOMR-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FORMALDEHYDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CH2O/c1-2/h1H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
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      <species metaid="M_HCO3_c" id="M_HCO3_c" name="hydrogencarbonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CHO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 61.0174</p>
            <p>smiles: OC([O-])=O</p>
            <p>inchikey: BVKZGUZCCUSVTD-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HCO3_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CARBAMOYL__45__P_c" id="M_CARBAMOYL__45__P_c" name="carbamoyl phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="CH2NO5P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 139.0051</p>
            <p>smiles: NC(=O)OP([O-])([O-])=O</p>
            <p>inchikey: FFQKYPRQEYGKAF-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CARBAMOYL__45__P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CH4NO5P/c2-1(3)7-8(4,5)6/h(H2,2,3)(H2,4,5,6)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_CPD__45__725_c" id="M_CPD__45__725_c" name="13(S)-HPOTE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H29O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 309.421</p>
            <p>smiles: CC\C=C/C[C@H](OO)\C=C\C=C/CCCCCCCC([O-])=O</p>
            <p>inchikey: UYQGVDXDXBAABN-FQSPHKRJSA-M</p>
          </body>
        </notes>
        <annotation>
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              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_LINOLENIC_ACID_c" id="M_LINOLENIC_ACID_c" name="&amp;alpha;-linolenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H29O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 277.4222</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/CCCCCCCC([O-])=O</p>
            <p>inchikey: DTOSIQBPPRVQHS-PDBXOOCHSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_LINOLENIC_ACID_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CYCLOARTENOL_c" id="M_CYCLOARTENOL_c" name="cycloartenol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H50O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 426.7174</p>
            <p>smiles: [H][C@@]12CC[C@]3([H])[C@]4(C[C@@]14CC[C@]1(C)[C@H](CC[C@@]21C)C(C)CCC=C(C)C)CC[C@H](O)C3(C)C</p>
            <p>inchikey: ONQRKEUAIJMULO-SPBTXPORSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CYCLOARTENOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__696_c" id="M_CPD__45__696_c" name="24-methylenecycloartanol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H52O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 440.744</p>
            <p>smiles: [H][C@@]1(CC[C@@]2(C)[C@]3([H])CC[C@]4([H])[C@]5(C[C@@]35CC[C@]12C)CC[C@H](O)C4(C)C)[C@H](C)CCC(=C)C(C)C</p>
            <p>inchikey: BDHQMRXFDYJGII-UEBIAWITSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_R__45__3__45__Hydroxypalmitoyl__45__ACPs_c" id="M_R__45__3__45__Hydroxypalmitoyl__45__ACPs_c" name="a (3R)-3-hydroxyhexadecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H31O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Fatty__45__Aldehydes_c" id="M_Fatty__45__Aldehydes_c" name="a fatty aldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CHOR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H]C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Fatty__45__Acids_c" id="M_Fatty__45__Acids_c" name="a fatty acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CO2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_2__45__Hexadecenoyl__45__ACPs_c" id="M_2__45__Hexadecenoyl__45__ACPs_c" name="a (2E)-hexadec-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H29OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCC\C=C\C(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Palmitoyl__45__ACPs_c" id="M_Palmitoyl__45__ACPs_c" name="a palmitoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H31OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCCCCC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__10261_c" id="M_CPD__45__10261_c" name="(3R)-3-hydroxyoctadecanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H66N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1045.966</p>
            <p>smiles: CCCCCCCCCCCCCCC[C@@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: WZMAIEGYXCOYSH-MKPUJKMASA-J</p>
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        </notes>
        <annotation>
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        </annotation>
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      <species metaid="M_CPD__45__10260_c" id="M_CPD__45__10260_c" name="3-oxooctadecanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H64N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1043.95</p>
            <p>smiles: CCCCCCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: LGOGWHDPDVAUNY-LFZQUHGESA-J</p>
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        </notes>
        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1027.951</p>
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            <p>inchikey: NBCCUIHOHUKBMK-ZDDAFBBHSA-J</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 412.6908</p>
            <p>smiles: [H][C@@](C)(CCC(=C)C(C)C)[C@@]1([H])CC[C@@]2([H])C3=C(CC[C@]12C)[C@@]1(C)CC[C@H](O)[C@@H](C)[C@]1([H])CC3</p>
            <p>inchikey: QLDNWJOJCDIMKK-XLFBYWHPSA-N</p>
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        </notes>
        <annotation>
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      <species metaid="M_ALPHA__45__METHYL__45__5__45__ALPHA__45__ERGOSTA_c" id="M_ALPHA__45__METHYL__45__5__45__ALPHA__45__ERGOSTA_c" name="4&amp;alpha;-methyl-5&amp;alpha;-ergosta-8,14,24(28)-trien-3&amp;beta;-ol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H46O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 410.6749</p>
            <p>smiles: [H][C@@]1(CC=C2C3=C(CC[C@]12C)[C@@]1(C)CC[C@H](O)[C@@H](C)[C@]1([H])CC3)[C@H](C)CCC(=C)C(C)C</p>
            <p>inchikey: HLAWVOWADPNAGN-BAHZUFOISA-N</p>
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        </notes>
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      <species metaid="M_STEAROYL__45__COA_c" id="M_STEAROYL__45__COA_c" name="stearoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H66N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1029.967</p>
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      <species metaid="M_CPD__45__4101_c" id="M_CPD__45__4101_c" name="24-methylidenelophenol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H48O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 412.6908</p>
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            <p>inchikey: RSMKYRDCCSNYFM-AAGDOFLISA-N</p>
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      <species metaid="M_STEARIC_ACID_c" id="M_STEARIC_ACID_c" name="stearate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H35O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 283.4698</p>
            <p>smiles: CCCCCCCCCCCCCCCCCC([O-])=O</p>
            <p>inchikey: QIQXTHQIDYTFRH-UHFFFAOYSA-M</p>
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      <species metaid="M_CPD__45__4126_c" id="M_CPD__45__4126_c" name="5-dehydroavenasterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H46O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 410.6749</p>
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            <p>inchikey: XPRWWANUPMYKMF-UUHDPGOWSA-N</p>
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      <species metaid="M_FERRICYTOCHROME__45__B5_c" id="M_FERRICYTOCHROME__45__B5_c" name="a ferricytochrome b5" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
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      <species metaid="M_Stearoyl__45__ACPs_c" id="M_Stearoyl__45__ACPs_c" name="a stearoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H35ORS">
        <notes>
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      </species>
      <species metaid="M_CPD__45__12646_c" id="M_CPD__45__12646_c" name="(11Z,14Z)-icosadienoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C41H66N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1053.988</p>
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            <p>inchikey: YCKYOUVXZZJCIU-YGYQDCEASA-J</p>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C41H70N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-32(50)69-25-24-43-31(49)22-23-44-39(53)36(52)41(2,3)27-62-68(59,60)65-67(57,58)61-26-30-35(64-66(54,55)56)34(51)40(63-30)48-29-47-33-37(42)45-28-46-38(33)48/h8-9,11-12,28-30,34-36,40,51-52H,4-7,10,13-27H2,1-3H3,(H,43,49)(H,44,53)(H,57,58)(H,59,60)(H2,42,45,46)(H2,54,55,56)/p-4/b9-8-,12-11-/t30-,34-,35-,36+,40-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_UDP__45__D__45__XYLOSE_c" id="M_UDP__45__D__45__XYLOSE_c" name="UDP-&amp;alpha;-D-xylose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C14H20N2O16P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 534.261</p>
            <p>smiles: O[C@@H]1[C@@H](COP([O-])(=O)OP([O-])(=O)O[C@H]2OC[C@@H](O)[C@H](O)[C@H]2O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: DQQDLYVHOTZLOR-OCIMBMBZSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_UDP__45__D__45__XYLOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C14H22N2O16P2/c17-5-3-28-13(11(22)8(5)19)31-34(26,27)32-33(24,25)29-4-6-9(20)10(21)12(30-6)16-2-1-7(18)15-14(16)23/h1-2,5-6,8-13,17,19-22H,3-4H2,(H,24,25)(H,26,27)(H,15,18,23)/p-2/t5-,6-,8+,9-,10-,11-,12-,13-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Protein__45__L__45__serines_c" id="M_Protein__45__L__45__serines_c" name="a [protein]-L-serine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6N2O3R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H](NC([*])=O)C(=O)N[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Core__45__Protein__45__L__45__Ser__45__Xyl_c" id="M_Core__45__Protein__45__L__45__Ser__45__Xyl_c" name="a 3-O-(&amp;beta;-D-xylosyl)-L-seryl-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H14N2O7R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__557_c" id="M_CPD__45__557_c" name="a protein-N&amp;omega;-(ADP-D-ribosyl)-L-arginine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C22H33N10O15P2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H](NC(=[NH2+])NCCC[C@H](NC([*])=O)C(=O)N[*])[C@H](O)[C@@H]2O)[C@@H](O)[C@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_NIACINAMIDE_c" id="M_NIACINAMIDE_c" name="nicotinamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H6N2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 122.1246</p>
            <p>smiles: NC(=O)c1cccnc1</p>
            <p>inchikey: DFPAKSUCGFBDDF-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NIACINAMIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H6N2O/c7-6(9)5-2-1-3-8-4-5/h1-4H,(H2,7,9)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Protein__45__L__45__Arginines_c" id="M_Protein__45__L__45__Arginines_c" name="a [protein]-L-arginine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C7H14N5O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: NC(=[NH2+])NCCC[C@H](NC(*)=O)C(=O)N*</p>
          </body>
        </notes>
      </species>
      <species metaid="M_PYRIDOXINE_c" id="M_PYRIDOXINE_c" name="pyridoxine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H11NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 169.1778</p>
            <p>smiles: Cc1ncc(CO)c(CO)c1O</p>
            <p>inchikey: LXNHXLLTXMVWPM-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PYRIDOXINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H11NO3/c1-5-8(12)7(4-11)6(3-10)2-9-5/h2,10-12H,3-4H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_B__45__Gal__45__14__45__NacGlc__45__R_c" id="M_B__45__Gal__45__14__45__NacGlc__45__R_c" name="a type 2 histo-blood group antigen precursor disaccharide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H24NO10R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@H]1[C@H](-*)O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_PYRIDOXAL_c" id="M_PYRIDOXAL_c" name="pyridoxal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H9NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 167.162</p>
            <p>smiles: [H]C(=O)c1c(CO)cnc(C)c1O</p>
            <p>inchikey: RADKZDMFGJYCBB-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PYRIDOXAL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H9NO3/c1-5-8(12)7(4-11)6(3-10)2-9-5/h2,4,10,12H,3H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CMP__45__N__45__ACETYL__45__NEURAMINATE_c" id="M_CMP__45__N__45__ACETYL__45__NEURAMINATE_c" name="CMP-N-acetyl-&amp;beta;-neuraminate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C20H29N4O16P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 612.4363</p>
            <p>smiles: [H][C@]1(O[C@](C[C@H](O)[C@H]1NC(C)=O)(OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1ccc(N)nc1=O)C([O-])=O)[C@H](O)[C@H](O)CO</p>
            <p>inchikey: TXCIAUNLDRJGJZ-BILDWYJOSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CMP__45__N__45__ACETYL__45__NEURAMINATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H31N4O16P/c1-7(26)22-12-8(27)4-20(18(32)33,39-16(12)13(29)9(28)5-25)40-41(35,36)37-6-10-14(30)15(31)17(38-10)24-3-2-11(21)23-19(24)34/h2-3,8-10,12-17,25,27-31H,4-6H2,1H3,(H,22,26)(H,32,33)(H,35,36)(H2,21,23,34)/p-2/t8-,9+,10+,12+,13+,14+,15+,16+,17+,20+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ALPHA__45__N__45__ACETYLNEURAMINYL__45__23__45__BETA__45__ETCETER_c" id="M_ALPHA__45__N__45__ACETYLNEURAMINYL__45__23__45__BETA__45__ETCETER_c" name="an N-acetyl-&amp;alpha;-neuraminyl-(2&amp;rarr;3)-&amp;beta;-D-galactosyl-(1&amp;rarr;4)-N-acetyl-&amp;beta;-D-glucosaminyl-R" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C25H40N2O19R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@]1(O[C@](C[C@H](O)[C@H]1NC(C)=O)(O[C@H]1[C@@H](O)[C@@H](CO)O[C@@H](O[C@H]2[C@H](O)[C@@H](NC(C)=O)[C@H](O[*])O[C@@H]2CO)[C@@H]1O)C([O-])=O)[C@H](O)[C@H](O)CO</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CMP_c" id="M_CMP_c" name="CMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 321.1817</p>
            <p>smiles: Nc1ccn([C@@H]2O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]2O)c(=O)n1</p>
            <p>inchikey: IERHLVCPSMICTF-XVFCMESISA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)/p-2/t4-,6-,7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PYRIDOXAL_PHOSPHATE_c" id="M_PYRIDOXAL_PHOSPHATE_c" name="pyridoxal 5&apos;-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C8H8NO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 245.1271</p>
            <p>smiles: [H]C(=O)c1c(COP([O-])([O-])=O)cnc(C)c1O</p>
            <p>inchikey: NGVDGCNFYWLIFO-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PYRIDOXAL_PHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" id="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" name="phosphoenolpyruvate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C3H2O6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 165.0198</p>
            <p>smiles: [O-]C(=O)C(=C)OP([O-])([O-])=O</p>
            <p>inchikey: DTBNBXWJWCWCIK-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PHOSPHO__45__ENOL__45__PYRUVATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H5O6P/c1-2(3(4)5)9-10(6,7)8/h1H2,(H,4,5)(H2,6,7,8)/p-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_SHIKIMATE__45__5P_c" id="M_SHIKIMATE__45__5P_c" name="shikimate 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C7H8O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 251.109</p>
            <p>smiles: O[C@@H]1CC(=C[C@@H](OP([O-])([O-])=O)[C@H]1O)C([O-])=O</p>
            <p>inchikey: QYOJSKGCWNAKGW-PBXRRBTRSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SHIKIMATE__45__5P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H11O8P/c8-4-1-3(7(10)11)2-5(6(4)9)15-16(12,13)14/h2,4-6,8-9H,1H2,(H,10,11)(H2,12,13,14)/p-3/t4-,5-,6+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__ENOLPYRUVYL__45__SHIKIMATE__45__5P_c" id="M_3__45__ENOLPYRUVYL__45__SHIKIMATE__45__5P_c" name="5-enolpyruvoyl-shikimate 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H9O10P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 320.1484</p>
            <p>smiles: O[C@H]1[C@@H](CC(=C[C@H]1OP([O-])([O-])=O)C([O-])=O)OC(=C)C([O-])=O</p>
            <p>inchikey: QUTYKIXIUDQOLK-PRJMDXOYSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__ENOLPYRUVYL__45__SHIKIMATE__45__5P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H13O10P/c1-4(9(12)13)19-6-2-5(10(14)15)3-7(8(6)11)20-21(16,17)18/h3,6-8,11H,1-2H2,(H,12,13)(H,14,15)(H2,16,17,18)/p-4/t6-,7-,8+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_AMINO__45__HYDROXYMETHYL__45__METHYL__45__PYR__45__P_c" id="M_AMINO__45__HYDROXYMETHYL__45__METHYL__45__PYR__45__P_c" name="4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H8N3O4P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 217.1203</p>
            <p>smiles: Cc1ncc(COP([O-])([O-])=O)c(N)n1</p>
            <p>inchikey: PKYFHKIYHBRTPI-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AMINO__45__HYDROXYMETHYL__45__METHYL__45__PYR__45__P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H10N3O4P/c1-4-8-2-5(6(7)9-4)3-13-14(10,11)12/h2H,3H2,1H3,(H2,7,8,9)(H2,10,11,12)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ALPHA__45__GLUCOSE_c" id="M_ALPHA__45__GLUCOSE_c" name="&amp;alpha;-D-glucopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: WQZGKKKJIJFFOK-DVKNGEFBSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ALPHA__45__GLUCOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Beta__45__D__45__glucan__45__w__45__C__45__3__45__substitution_c" id="M_Beta__45__D__45__glucan__45__w__45__C__45__3__45__substitution_c" name="a &amp;beta;-D-glucan with a C3-substituted glucose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Beta__45__D__45__Glucans_c" id="M_Beta__45__D__45__Glucans_c" name="a &amp;beta;-D glucan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_1__45__4__45__beta__45__Xylan_c" id="M_1__45__4__45__beta__45__Xylan_c" name="a (1&amp;rarr;4)-&amp;beta;-D-xylan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_1__45__4__45__D__45__xylooligosaccharides_c" id="M_1__45__4__45__D__45__xylooligosaccharides_c" name="a (1-&gt;4)-&amp;beta;-D-xylan oligosaccharide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H34O17">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 546</p>
          </body>
        </notes>
      </species>
      <species metaid="M_a__45__glycopeptide__45__D__45__mannosyl__45__Nsup4sup__45__N__45__ace_c" id="M_a__45__glycopeptide__45__D__45__mannosyl__45__Nsup4sup__45__N__45__ace_c" name="a glycopeptide-D-mannosyl-N4-(N-acetyl-D-glucosaminyl)2-asparagine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_N__45__acetyl__45__D__45__glucosamine__45__asparagine_c" id="M_N__45__acetyl__45__D__45__glucosamine__45__asparagine_c" name="N-acetyl-D-glucosamine-asparagine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__14375_c" id="M_CPD__45__14375_c" name="a glycopeptide-D-mannosyl-N4-N-acetyl-D-glucosamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_glycols_c" id="M_glycols_c" name="a glycol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_epoxides_c" id="M_epoxides_c" name="an epoxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2OR4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]C1([*])OC1([*])[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Tripeptidyl__45__Peptidase__45__II__45__Substrates_c" id="M_Tripeptidyl__45__Peptidase__45__II__45__Substrates_c" name="a tripeptidyl-peptidase II substrate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_TRIPEPTIDES_c" id="M_TRIPEPTIDES_c" name="a tripeptide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Peptides__45__holder_c" id="M_Peptides__45__holder_c" name="a peptide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Tripeptidyl__45__Peptidase__45__I__45__Substrates_c" id="M_Tripeptidyl__45__Peptidase__45__I__45__Substrates_c" name="a tripeptidyl-peptidase I substrate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Long__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" id="M_Long__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" name="a long-chain trans-2,3-dehydroacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD1F__45__96_c" id="M_CPD1F__45__96_c" name="gibberellin A19" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C20H24O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 360.4021</p>
            <p>smiles: [H][C@@]12CC[C@]3(O)C[C@]1(CC3=C)[C@@H](C([O-])=O)[C@@]1([H])[C@]2(CCC[C@@]1(C)C([O-])=O)C=O</p>
            <p>inchikey: VNCQCPQAMDQEBY-YTJHIPEWSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD1F__45__96_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H26O6/c1-11-8-19-9-20(11,26)7-4-12(19)18(10-21)6-3-5-17(2,16(24)25)14(18)13(19)15(22)23/h10,12-14,26H,1,3-9H2,2H3,(H,22,23)(H,24,25)/p-2/t12-,13+,14+,17+,18+,19-,20-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Long__45__Chain__45__Aldehydes_c" id="M_Long__45__Chain__45__Aldehydes_c" name="a long-chain aldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CHOR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H]C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Long__45__Chain__45__Acyl__45__CoAs_c" id="M_Long__45__Chain__45__Acyl__45__CoAs_c" name="a long-chain acyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C22H31N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_L__45__ALLO__45__THREONINE_c" id="M_L__45__ALLO__45__THREONINE_c" name="L-allo-threonine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 119.1192</p>
            <p>smiles: C[C@H](O)[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: AYFVYJQAPQTCCC-HRFVKAFMSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__ALLO__45__THREONINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H9NO3/c1-2(6)3(5)4(7)8/h2-3,6H,5H2,1H3,(H,7,8)/t2-,3-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GLY_c" id="M_GLY_c" name="glycine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 75.0666</p>
            <p>smiles: [NH3+]CC([O-])=O</p>
            <p>inchikey: DHMQDGOQFOQNFH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GLY_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ACETALD_c" id="M_ACETALD_c" name="acetaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 44.0526</p>
            <p>smiles: [H]C(C)=O</p>
            <p>inchikey: IKHGUXGNUITLKF-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ACETALD_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H4O/c1-2-3/h2H,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__9973_c" id="M_CPD__45__9973_c" name="an [eIF5A-precursor]-deoxyhypusine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H22N4O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Donor__45__H2_c" id="M_Donor__45__H2_c" name="a reduced electron acceptor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_EIF5A__45__HYPUSINE_c" id="M_EIF5A__45__HYPUSINE_c" name="an [eIF5A]-hypusine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Acceptor_c" id="M_Acceptor_c" name="an oxidized electron acceptor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DNA__45__deoxycytidine__45__thymidine__45__dimer_c" id="M_DNA__45__deoxycytidine__45__thymidine__45__dimer_c" name="a dimer of non-adjacent 2&apos;-deoxycytidine and thymidine in DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Light_c" id="M_Light_c" name="h&amp;nu;" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: *</p>
          </body>
        </notes>
      </species>
      <species metaid="M_DNA__45__Cytidines_c" id="M_DNA__45__Cytidines_c" name="a 2&apos;-deoxycytidine in DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_DNA__45__thymidines_c" id="M_DNA__45__thymidines_c" name="a thymidine in DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_DEPHOSPHO__45__COA_c" id="M_DEPHOSPHO__45__COA_c" name="3&apos;-dephospho-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H33N7O13P2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 685.539</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCS</p>
            <p>inchikey: KDTSHFARGAKYJN-IBOSZNHHSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DEPHOSPHO__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C21H35N7O13P2S/c1-21(2,16(32)19(33)24-4-3-12(29)23-5-6-44)8-39-43(36,37)41-42(34,35)38-7-11-14(30)15(31)20(40-11)28-10-27-13-17(22)25-9-26-18(13)28/h9-11,14-16,20,30-32,44H,3-8H2,1-2H3,(H,23,29)(H,24,33)(H,34,35)(H,36,37)(H2,22,25,26)/p-2/t11-,14-,15-,16+,20-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_FRUCTOSE__45__6P_c" id="M_FRUCTOSE__45__6P_c" name="&amp;beta;-D-fructofuranose 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: OC[C@@]1(O)O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: BGWGXPAPYGQALX-ARQDHWQXSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FRUCTOSE__45__6P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H13O9P/c7-2-6(10)5(9)4(8)3(15-6)1-14-16(11,12)13/h3-5,7-10H,1-2H2,(H2,11,12,13)/p-2/t3-,4-,5+,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_HOMO__45__CYS_c" id="M_HOMO__45__CYS_c" name="L-homocysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 135.185</p>
            <p>smiles: [NH3+][C@@H](CCS)C([O-])=O</p>
            <p>inchikey: FFFHZYDWPBMWHY-VKHMYHEASA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_HOMO__45__CYS_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ADENOSINE_c" id="M_ADENOSINE_c" name="adenosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 267.2413</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O</p>
            <p>inchikey: OIRDTQYFTABQOQ-KQYNXXCUSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_ADENOSINE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Cyclic__45__3__45__5__45__Nucleoside__45__Monophosphates_c" id="M_Cyclic__45__3__45__5__45__Nucleoside__45__Monophosphates_c" name="a nucleoside cyclic 3&apos;,5&apos;-monophosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H6O5PR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]P1(=O)OC[C@H]2OC(*)[C@H]([*])[C@@H]2O1</p>
          </body>
        </notes>
      </species>
      <species metaid="M_ADENINE_c" id="M_ADENINE_c" name="adenine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 135.1267</p>
            <p>smiles: Nc1ncnc2[nH]cnc12</p>
            <p>inchikey: GFFGJBXGBJISGV-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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              <bqbiol:isVersionOf>
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      <species metaid="M_GAP_c" id="M_GAP_c" name="D-glyceraldehyde 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H5O6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 168.0431</p>
            <p>smiles: [H]C(=O)[C@H](O)COP([O-])([O-])=O</p>
            <p>inchikey: LXJXRIRHZLFYRP-VKHMYHEASA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_GAP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7O6P/c4-1-3(5)2-9-10(6,7)8/h1,3,5H,2H2,(H2,6,7,8)/p-2/t3-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_ERYTHROSE__45__4P_c" id="M_ERYTHROSE__45__4P_c" name="D-erythrose 4-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H7O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 198.069</p>
            <p>smiles: [H]C(=O)[C@H](O)[C@H](O)COP([O-])([O-])=O</p>
            <p>inchikey: NGHMDNPXVRFFGS-IUYQGCFVSA-L</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_ERYTHROSE__45__4P_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_CHONDROITIN__45__4__45__SULFATE_c" id="M_CHONDROITIN__45__4__45__SULFATE_c" name="a [chondroitin-sulfate] containing 4-O-sulfo-N-acetylgalactosamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_INDOLE_ACETATE_AUXIN_c" id="M_INDOLE_ACETATE_AUXIN_c" name="(indol-3-yl)acetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H8NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.1766</p>
            <p>smiles: [O-]C(=O)Cc1c[nH]c2ccccc12</p>
            <p>inchikey: SEOVTRFCIGRIMH-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_INDOLE_ACETATE_AUXIN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H9NO2/c12-10(13)5-7-6-11-9-4-2-1-3-8(7)9/h1-4,6,11H,5H2,(H,12,13)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_TRANS__45__D2__45__ENOYL__45__COA_c" id="M_TRANS__45__D2__45__ENOYL__45__COA_c" name="a trans-2-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C24H33N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)\C=C\[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Chondroitin__45__N__45__acetyl__45__galactosamines_c" id="M_Chondroitin__45__N__45__acetyl__45__galactosamines_c" name="a [chondroitin] containing N-acetyl-galactosamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_SULFATE_c" id="M_SULFATE_c" name="sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="O4S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 96.064</p>
            <p>smiles: [O-]S([O-])(=O)=O</p>
            <p>inchikey: QAOWNCQODCNURD-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_SULFATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_Saturated__45__Fatty__45__Acyl__45__CoA_c" id="M_Saturated__45__Fatty__45__Acyl__45__CoA_c" name="a 2,3,4-saturated fatty acyl CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H37N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CCC[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__18077_c" id="M_CPD__45__18077_c" name="Glc3Man9GlcNAc2-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_TREHALOSE_c" id="M_TREHALOSE_c" name="&amp;alpha;,&amp;alpha;-trehalose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 342.2965</p>
            <p>smiles: OC[C@H]1O[C@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: HDTRYLNUVZCQOY-LIZSDCNHSA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_TREHALOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H22O11/c13-1-3-5(15)7(17)9(19)11(21-3)23-12-10(20)8(18)6(16)4(2-14)22-12/h3-20H,1-2H2/t3-,4-,5-,6-,7+,8+,9-,10-,11-,12-/m1/s1"/>
                </rdf:Bag>
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      <species metaid="M_Glc2Man9GlcNAc2__45__proteins_c" id="M_Glc2Man9GlcNAc2__45__proteins_c" name="Glc2Man9GlcNAc2-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_GLC_c" id="M_GLC_c" name="&amp;beta;-D-glucopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: WQZGKKKJIJFFOK-VFUOTHLCSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_GLC_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_INDOLE_ACETALDEHYDE_c" id="M_INDOLE_ACETALDEHYDE_c" name="(indol-3-yl)acetaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Mannosyl8__45__Nacetylglucosaminyl2_c" id="M_Mannosyl8__45__Nacetylglucosaminyl2_c" name="Mannosyl8-Nacetylglucosaminyl2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C64H108N2O51">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1721.5251</p>
            <p>smiles: CC(=O)N[C@H]1C(O)O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO[C@H]4O[C@H](CO[C@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]5O)[C@@H](O)[C@H](O[C@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]5O[C@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]5O)[C@@H]4O)[C@@H](O)[C@H](O[C@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]4O[C@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]4O[C@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]4O)[C@@H]3O)[C@H](O)[C@H]2NC(C)=O)[C@@H]1O</p>
            <p>inchikey: CRZADIKAMHTAGW-YGRQLCRJSA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_Mannosyl8__45__Nacetylglucosaminyl2_c">
              <bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_Sulfurated__45__Sulfur__45__Acceptors_c" id="M_Sulfurated__45__Sulfur__45__Acceptors_c" name="a sulfurated [sulfur carrier]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Reduced__45__2Fe__45__2S__45__Ferredoxins_c" id="M_Reduced__45__2Fe__45__2S__45__Ferredoxins_c" name="a reduced [2Fe-2S] ferredoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PROTEIN__45__LIPOYLLYSINE_c" id="M_PROTEIN__45__LIPOYLLYSINE_c" name="a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CH33ADO_c" id="M_CH33ADO_c" name="5&apos;-deoxyadenosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 251.2419</p>
            <p>smiles: C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: XGYIMTFOTBMPFP-KQYNXXCUSA-N</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_CH33ADO_c">
              <bqbiol:isVersionOf>
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              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_SUCC__45__S__45__ALD_c" id="M_SUCC__45__S__45__ALD_c" name="succinate semialdehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 101.0812</p>
            <p>smiles: [O-]C(=O)CCC=O</p>
            <p>inchikey: UIUJIQZEACWQSV-UHFFFAOYSA-M</p>
          </body>
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      <species metaid="M_Unsulfurated__45__Sulfur__45__Acceptors_c" id="M_Unsulfurated__45__Sulfur__45__Acceptors_c" name="an unsulfurated [sulfur carrier]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Oxidized__45__2Fe__45__2S__45__Ferredoxins_c" id="M_Oxidized__45__2Fe__45__2S__45__Ferredoxins_c" name="an oxidized [2Fe-2S] ferredoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_Octanoylated__45__Gcv__45__H_c" id="M_Octanoylated__45__Gcv__45__H_c" name="a [glycine-cleavage complex H protein] N6-octanoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PROTEIN__45__C__45__TERMINAL__45__S__45__ETC__45__CYSTEINE_c" id="M_PROTEIN__45__C__45__TERMINAL__45__S__45__ETC__45__CYSTEINE_c" name="a [protein] C-terminal S-farnesyl-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_a__45__pyruvate__45__dehydrogenase__45__E2__45__protein__45__Nsup_c" id="M_a__45__pyruvate__45__dehydrogenase__45__E2__45__protein__45__Nsup_c" name="a [pyruvate dehydrogenase E2 protein] N6-octanoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PROTEIN__45__C__45__TERMINAL__45__S__45__FARNESYL__45__L__45__CYSTEINE_c" id="M_PROTEIN__45__C__45__TERMINAL__45__S__45__FARNESYL__45__L__45__CYSTEINE_c" name="a [protein] C-terminal S-farnesyl-L-cysteine methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Histone__45__N__45__o__45__methyl__45__arginines_c" id="M_Histone__45__N__45__o__45__methyl__45__arginines_c" name="Histone-N-o-methyl-arginines" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_Histone__45__L__45__arginines_c" id="M_Histone__45__L__45__arginines_c" name="Histone-L-arginines" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Pyruvate__45__dehydrogenase__45__lipoate_c" id="M_Pyruvate__45__dehydrogenase__45__lipoate_c" name="a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14OS2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_a__45__2__45__oxoglutarate__45__dehydrogenase__45__E2__45__protei_c" id="M_a__45__2__45__oxoglutarate__45__dehydrogenase__45__E2__45__protei_c" name="a [2-oxoglutarate-dehydrogenase E2 protein] N6-octanoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Oxo__45__glutarate__45__dehydrogenase__45__lipoyl_c" id="M_Oxo__45__glutarate__45__dehydrogenase__45__lipoyl_c" name="a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13OS2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Myelin__45__N__45__o__45__methyl__45__arginines_c" id="M_Myelin__45__N__45__o__45__methyl__45__arginines_c" name="Myelin-N-o-methyl-arginines" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C8H16N5O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CNC(=[NH2+])NCCC[C@H](NC([*])=O)C(=O)N[*]</p>
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        </notes>
      </species>
      <species metaid="M_Sugar__45__Phosphate_c" id="M_Sugar__45__Phosphate_c" name="a sugar phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H22O14P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 421</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Myelin__45__L__45__arginines_c" id="M_Myelin__45__L__45__arginines_c" name="Myelin-L-arginines" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Sugar_c" id="M_Sugar_c" name="a sugar" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_METHIONINE__45__SYNTHASE__45__METHYLCOBALAMIN_c" id="M_METHIONINE__45__SYNTHASE__45__METHYLCOBALAMIN_c" name="methylcob(III)alamin-[methionine synthase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ETR__45__Quinones_c" id="M_ETR__45__Quinones_c" name="an electron-transfer quinone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Methionine__45__synthase__45__cob__45__II__45__alamins_c" id="M_Methionine__45__synthase__45__cob__45__II__45__alamins_c" name="cob(II)alamin-[methionine synthase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ETR__45__Quinols_c" id="M_ETR__45__Quinols_c" name="an electron-transfer quinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__763_c" id="M_CPD__45__763_c" name="arsenite" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="AsH2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 124.9362</p>
            <p>smiles: O[As](O)[O-]</p>
            <p>inchikey: AQLMHYSWFMLWBS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_METHYLARSONATE_c" id="M_METHYLARSONATE_c" name="methylarsonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CH4AsO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 138.9628</p>
            <p>smiles: C[As](O)([O-])=O</p>
            <p>inchikey: QYPPRTNMGCREIM-UHFFFAOYSA-M</p>
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        </notes>
        <annotation>
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      <species metaid="M_INOSITOL__45__1__45__3__45__4__45__TRIPHOSPHATE_c" id="M_INOSITOL__45__1__45__3__45__4__45__TRIPHOSPHATE_c" name="D-myo-inositol (1,3,4)-trisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-6" fbc:chemicalFormula="C6H9O15P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 414.0512</p>
            <p>smiles: O[C@@H]1[C@@H](O)[C@H](OP([O-])([O-])=O)[C@@H](OP([O-])([O-])=O)[C@@H](O)[C@H]1OP([O-])([O-])=O</p>
            <p>inchikey: MMWCIQZXVOZEGG-MLQGYMEPSA-H</p>
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      <species metaid="M_CPD__45__9040_c" id="M_CPD__45__9040_c" name="cobalt-precorrin-3" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-8" fbc:chemicalFormula="C43H40CoN4O16">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 927.7325</p>
            <p>smiles: CC1=C2[N+]3=C(C=C4N5C(=CC6=[N+]7C(Cc8c(CCC([O-])=O)c(CC([O-])=O)c1n8[Co--]357)=C(CCC([O-])=O)C6CC([O-])=O)[C@@H](CCC([O-])=O)[C@]4(C)CC([O-])=O)[C@@H](CCC([O-])=O)[C@]2(C)CC([O-])=O</p>
            <p>inchikey: FKTVLCPLZMVWHD-LPFAUARPSA-E</p>
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      <species metaid="M_CPD__45__9041_c" id="M_CPD__45__9041_c" name="cobalt-precorrin-4" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-7" fbc:chemicalFormula="C44H43CoN4O16">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 942.7665</p>
            <p>smiles: CC1OC(=O)C[C@@]2(C)[C@H](CCC([O-])=O)C3=CC4=[N+]5C(=Cc6c(CC([O-])=O)c(CCC([O-])=O)c7CC8=[N+]9C(=C(CC([O-])=O)[C@@]8(C)CCC([O-])=O)C12N3[Co--]59n67)[C@@H](CCC([O-])=O)[C@]4(C)CC([O-])=O</p>
            <p>inchikey: VHHGJROBFDFFAE-QTESGACZSA-F</p>
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      <species metaid="M_CPD__45__9047_c" id="M_CPD__45__9047_c" name="cobalt-precorrin-5B" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-8" fbc:chemicalFormula="C43H42CoN4O16">
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 929.7484</p>
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        <notes>
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            <p>mass: 944.7823</p>
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        <notes>
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            <p>mass: 946.7982</p>
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        <notes>
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            <p>mass: 190.241</p>
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            <p>mass: 112.1072</p>
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            <p>mass: 1041.934</p>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PRO_c" id="M_PRO_c" name="L-proline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 115.1305</p>
            <p>smiles: [O-]C(=O)[C@@H]1CCC[NH2+]1</p>
            <p>inchikey: ONIBWKKTOPOVIA-BYPYZUCNSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PRO_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H9NO2/c7-5(8)4-2-1-3-6-4/h4,6H,1-3H2,(H,7,8)/t4-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Ubiquinols_c" id="M_Ubiquinols_c" name="an ubiquinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Ubiquinones_c" id="M_Ubiquinones_c" name="a ubiquinone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5__45__HYDROXY__45__CTP_c" id="M_5__45__HYDROXY__45__CTP_c" name="5-hydroxy-CTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H12N3O15P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 495.1262</p>
            <p>smiles: [H][C@]1(COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)O[C@@]([H])(n2cc(O)c(=N)[nH+]c2[O-])[C@]([H])(O)[C@]1([H])O</p>
            <p>inchikey: DMFODUNDODUQKK-UAKXSSHOSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__HYDROXY__45__CTP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H16N3O15P3/c10-7-3(13)1-12(9(16)11-7)8-6(15)5(14)4(25-8)2-24-29(20,21)27-30(22,23)26-28(17,18)19/h1,4-6,8,13-15H,2H2,(H,20,21)(H,22,23)(H2,10,11,16)(H2,17,18,19)/p-4/t4-,5-,6-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__10269_c" id="M_CPD__45__10269_c" name="palmitoleoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H60N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 999.897</p>
            <p>smiles: CCCCCC\C=C/CCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: QBYOCCWNZAOZTL-MDMKAECGSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__10269_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C37H64N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-28(46)65-21-20-39-27(45)18-19-40-35(49)32(48)37(2,3)23-58-64(55,56)61-63(53,54)57-22-26-31(60-62(50,51)52)30(47)36(59-26)44-25-43-29-33(38)41-24-42-34(29)44/h9-10,24-26,30-32,36,47-48H,4-8,11-23H2,1-3H3,(H,39,45)(H,40,49)(H,53,54)(H,55,56)(H2,38,41,42)(H2,50,51,52)/p-4/b10-9-/t26-,30-,31-,32+,36-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__12377_c" id="M_CPD__45__12377_c" name="hydroxyl radical" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="HO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 17.0073</p>
            <p>smiles: [O][H]</p>
            <p>inchikey: TUJKJAMUKRIRHC-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__12377_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/HO/h1H"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CTP_c" id="M_CTP_c" name="CTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H12N3O14P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 479.1268</p>
            <p>smiles: Nc1ccn([C@@H]2O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]2O)c(=O)n1</p>
            <p>inchikey: PCDQPRRSZKQHHS-XVFCMESISA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CTP_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H16N3O14P3/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H2,10,11,15)(H2,16,17,18)/p-4/t4-,6-,7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BIOTIN_c" id="M_BIOTIN_c" name="biotin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H15N2O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 243.303</p>
            <p>smiles: [H][C@]12CS[C@@H](CCCCC([O-])=O)[C@@]1([H])NC(=O)N2</p>
            <p>inchikey: YBJHBAHKTGYVGT-ZKWXMUAHSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BIOTIN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N2O3S/c13-8(14)4-2-1-3-7-9-6(5-16-7)11-10(15)12-9/h6-7,9H,1-5H2,(H,13,14)(H2,11,12,15)/p-1/t6-,7-,9-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BIO__45__5__45__AMP_c" id="M_BIO__45__5__45__AMP_c" name="biotinyl-5&apos;-adenylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H27N7O9PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 572.509</p>
            <p>smiles: [H][C@]12CS[C@@H](CCCCC(=O)OP([O-])(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n3cnc4c(N)ncnc34)[C@@]1([H])NC(=O)N2</p>
            <p>inchikey: UTQCSTJVMLODHM-RHCAYAJFSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BIO__45__5__45__AMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H28N7O9PS/c21-17-14-18(23-7-22-17)27(8-24-14)19-16(30)15(29)10(35-19)5-34-37(32,33)36-12(28)4-2-1-3-11-13-9(6-38-11)25-20(31)26-13/h7-11,13,15-16,19,29-30H,1-6H2,(H,32,33)(H2,21,22,23)(H2,25,26,31)/p-1/t9-,10+,11-,13-,15+,16+,19+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__19155_c" id="M_CPD__45__19155_c" name="(S)-3-hydroxy-(9Z)-hexadecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H60N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1015.897</p>
            <p>smiles: CCCCCC\C=C/CCCCC[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: ZIRSQPAPHGZDIL-VSCXGISKSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C37H64N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-25(45)20-28(47)66-19-18-39-27(46)16-17-40-35(50)32(49)37(2,3)22-59-65(56,57)62-64(54,55)58-21-26-31(61-63(51,52)53)30(48)36(60-26)44-24-43-29-33(38)41-23-42-34(29)44/h9-10,23-26,30-32,36,45,48-49H,4-8,11-22H2,1-3H3,(H,39,46)(H,40,50)(H,54,55)(H,56,57)(H2,38,41,42)(H2,51,52,53)/p-4/b10-9-/t25-,26+,30+,31+,32-,36+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DUDP_c" id="M_DUDP_c" name="dUDP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H11N2O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 385.1396</p>
            <p>smiles: O[C@H]1C[C@@H](O[C@@H]1COP([O-])(=O)OP([O-])([O-])=O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: QHWZTVCCBMIIKE-SHYZEUOFSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DUDP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H14N2O11P2/c12-5-3-8(11-2-1-7(13)10-9(11)14)21-6(5)4-20-24(18,19)22-23(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,18,19)(H,10,13,14)(H2,15,16,17)/p-3/t5-,6+,8+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__19162_c" id="M_CPD__45__19162_c" name="(2E,9Z)-hexadecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H58N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 997.882</p>
            <p>smiles: CCCCCC\C=C/CCCCC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: BEQWCBBSKHMRCA-HENMZMGOSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__19162_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C37H62N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-28(46)65-21-20-39-27(45)18-19-40-35(49)32(48)37(2,3)23-58-64(55,56)61-63(53,54)57-22-26-31(60-62(50,51)52)30(47)36(59-26)44-25-43-29-33(38)41-24-42-34(29)44/h9-10,16-17,24-26,30-32,36,47-48H,4-8,11-15,18-23H2,1-3H3,(H,39,45)(H,40,49)(H,53,54)(H,55,56)(H2,38,41,42)(H2,50,51,52)/p-4/b10-9-,17-16+/t26-,30-,31-,32+,36-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Oxidized__45__NrdH__45__Proteins_c" id="M_Oxidized__45__NrdH__45__Proteins_c" name="an oxidized NrdH glutaredoxin-like protein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PROTEIN__45__L__45__CITRULLINE_c" id="M_PROTEIN__45__L__45__CITRULLINE_c" name="a [protein]-L-citrulline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12N4O3R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_SER_c" id="M_SER_c" name="L-serine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 105.0926</p>
            <p>smiles: [NH3+][C@@H](CO)C([O-])=O</p>
            <p>inchikey: MTCFGRXMJLQNBG-REOHCLBHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SER_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ADP__45__D__45__Ribosyl__45__Acceptors_c" id="M_ADP__45__D__45__Ribosyl__45__Acceptors_c" name="an ADP-D-ribosyl acceptor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_HOMO__45__SER_c" id="M_HOMO__45__SER_c" name="L-homoserine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 119.1192</p>
            <p>smiles: [NH3+][C@@H](CCO)C([O-])=O</p>
            <p>inchikey: UKAUYVFTDYCKQA-VKHMYHEASA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HOMO__45__SER_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H9NO3/c5-3(1-2-6)4(7)8/h3,6H,1-2,5H2,(H,7,8)/t3-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_SUC__45__COA_c" id="M_SUC__45__COA_c" name="succinyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C25H35N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 862.57</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CCC([O-])=O</p>
            <p>inchikey: VNOYUJKHFWYWIR-ITIYDSSPSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__17388_c" id="M_CPD__45__17388_c" name="(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H64N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1116.014</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: DNHDPAXPQGYGIJ-KWFBMMABSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_CRPB__45__all__45__trans__45__Retinal_c" id="M_CRPB__45__all__45__trans__45__Retinal_c" name="an all-trans retinal-[cellular-retinol-binding-protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CRPB__45__all__45__trans__45__Retinol_c" id="M_CRPB__45__all__45__trans__45__Retinol_c" name="an all-trans retinol-[cellular-retinol-binding-protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_THIAMINE__45__PYROPHOSPHATE_c" id="M_THIAMINE__45__PYROPHOSPHATE_c" name="thiamine diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C12H16N4O7P2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 422.292</p>
            <p>smiles: Cc1c(CCOP([O-])(=O)OP([O-])([O-])=O)sc[n+]1Cc1cnc(C)nc1N</p>
            <p>inchikey: AYEKOFBPNLCAJY-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_THIAMINE__45__PYROPHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H18N4O7P2S/c1-8-11(3-4-22-25(20,21)23-24(17,18)19)26-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H4-,13,14,15,17,18,19,20,21)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2__45__ALPHA__45__HYDROXYETHYL__45__THPP_c" id="M_2__45__ALPHA__45__HYDROXYETHYL__45__THPP_c" name="2-(&amp;alpha;-hydroxyethyl)thiamine diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C14H20N4O8P2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 466.344</p>
            <p>smiles: CC(O)c1sc(CCOP([O-])(=O)OP([O-])([O-])=O)c(C)[n+]1Cc1cnc(C)nc1N</p>
            <p>inchikey: RRUVJGASJONMDY-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2__45__ALPHA__45__HYDROXYETHYL__45__THPP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C14H22N4O8P2S/c1-8-12(4-5-25-28(23,24)26-27(20,21)22)29-14(9(2)19)18(8)7-11-6-16-10(3)17-13(11)15/h6,9,19H,4-5,7H2,1-3H3,(H4-,15,16,17,20,21,22,23,24)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_DEAMIDO__45__NAD_c" id="M_DEAMIDO__45__NAD_c" name="nicotinate adenine dinucleotide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H24N6O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 662.3951</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)[n+]2cccc(c2)C([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: SENPVEZBRZQVST-HISDBWNOSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DEAMIDO__45__NAD_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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        </annotation>
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      <species metaid="M_CPD__45__17312_c" id="M_CPD__45__17312_c" name="(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C43H62N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1073.978</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: MENFZXMQSYYVRK-CRCGJGBYSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_LYS_c" id="M_LYS_c" name="L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C6H15N2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 147.195</p>
            <p>smiles: [NH3+]CCCC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: KDXKERNSBIXSRK-YFKPBYRVSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_LYS_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H14N2O2/c7-4-2-1-3-5(8)6(9)10/h5H,1-4,7-8H2,(H,9,10)/p+1/t5-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_LYS__45__tRNAs_c" id="M_LYS__45__tRNAs_c" name="a tRNALys" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Charged__45__LYS__45__tRNAs_c" id="M_Charged__45__LYS__45__tRNAs_c" name="an L-lysyl-[tRNALys]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ACETYL__45__P_c" id="M_ACETYL__45__P_c" name="acetyl phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C2H3O5P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 138.0171</p>
            <p>smiles: CC(=O)OP([O-])([O-])=O</p>
            <p>inchikey: LIPOUNRJVLNBCD-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ACETYL__45__P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H5O5P/c1-2(3)7-8(4,5)6/h1H3,(H2,4,5,6)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__567_c" id="M_CPD__45__567_c" name="N6-acetyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H16N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 188.2242</p>
            <p>smiles: CC(=O)NCCCC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: DTERQYGMUDWYAZ-ZETCQYMHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_2__45__Lysophosphatidylcholines_c" id="M_2__45__Lysophosphatidylcholines_c" name="a 1-acyl-sn-glycero-3-phosphocholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H19NO7PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[N+](C)(C)CCOP([O-])(=O)OC[C@H](O)COC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Carboxylates_c" id="M_Carboxylates_c" name="a carboxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CO2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_L__45__1__45__GLYCERO__45__PHOSPHORYLCHOLINE_c" id="M_L__45__1__45__GLYCERO__45__PHOSPHORYLCHOLINE_c" name="sn-glycero-3-phosphocholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 257.2213</p>
            <p>smiles: C[N+](C)(C)CCOP([O-])(=O)OC[C@H](O)CO</p>
            <p>inchikey: SUHOQUVVVLNYQR-MRVPVSSYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__1__45__GLYCERO__45__PHOSPHORYLCHOLINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H20NO6P/c1-9(2,3)4-5-14-16(12,13)15-7-8(11)6-10/h8,10-11H,4-7H2,1-3H3/t8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_SHIKIMATE_c" id="M_SHIKIMATE_c" name="shikimate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H9O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 173.1439</p>
            <p>smiles: O[C@@H]1CC(=C[C@@H](O)[C@H]1O)C([O-])=O</p>
            <p>inchikey: JXOHGGNKMLTUBP-HSUXUTPPSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SHIKIMATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H10O5/c8-4-1-3(7(11)12)2-5(9)6(4)10/h1,4-6,8-10H,2H2,(H,11,12)/p-1/t4-,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIAMINONONANOATE_c" id="M_DIAMINONONANOATE_c" name="7,8-diaminopelargonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C9H21N2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 189.2747</p>
            <p>smiles: CC([NH3+])C([NH3+])CCCCCC([O-])=O</p>
            <p>inchikey: KCEGBPIYGIWCDH-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIAMINONONANOATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H20N2O2/c1-7(10)8(11)5-3-2-4-6-9(12)13/h7-8H,2-6,10-11H2,1H3,(H,12,13)/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DETHIOBIOTIN_c" id="M_DETHIOBIOTIN_c" name="dethiobiotin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H17N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 213.2541</p>
            <p>smiles: CC1NC(=O)NC1CCCCCC([O-])=O</p>
            <p>inchikey: AUTOLBMXDDTRRT-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DETHIOBIOTIN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H18N2O3/c1-7-8(12-10(15)11-7)5-3-2-4-6-9(13)14/h7-8H,2-6H2,1H3,(H,13,14)(H2,11,12,15)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BETAINE_ALDEHYDE_c" id="M_BETAINE_ALDEHYDE_c" name="betaine aldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H12NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 102.1543</p>
            <p>smiles: [H]C(=O)C[N+](C)(C)C</p>
            <p>inchikey: SXKNCCSPZDCRFD-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BETAINE_ALDEHYDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H12NO/c1-6(2,3)4-5-7/h5H,4H2,1-3H3/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BETAINE_c" id="M_BETAINE_c" name="glycine betaine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 117.1463</p>
            <p>smiles: C[N+](C)(C)CC([O-])=O</p>
            <p>inchikey: KWIUHFFTVRNATP-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BETAINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H11NO2/c1-6(2,3)4-5(7)8/h4H2,1-3H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DGDP_c" id="M_DGDP_c" name="dGDP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 424.1789</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@H]1C[C@H](O)[C@@H](COP([O-])(=O)OP([O-])([O-])=O)O1</p>
            <p>inchikey: CIKGWCTVFSRMJU-KVQBGUIXSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DGDP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H15N5O10P2/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(24-6)2-23-27(21,22)25-26(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H2,18,19,20)(H3,11,13,14,17)/p-3/t4-,5+,6+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DGTP_c" id="M_DGTP_c" name="dGTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O13P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 503.1515</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@H]1C[C@H](O)[C@@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)O1</p>
            <p>inchikey: HAAZLUGHYHWQIW-KVQBGUIXSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DGTP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N5O13P3/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(26-6)2-25-30(21,22)28-31(23,24)27-29(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H,23,24)(H2,18,19,20)(H3,11,13,14,17)/p-4/t4-,5+,6+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GALACTOSE__45__1P_c" id="M_GALACTOSE__45__1P_c" name="&amp;alpha;-D-galactose 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: OC[C@H]1O[C@H](OP([O-])([O-])=O)[C@H](O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: HXXFSFRBOHSIMQ-FPRJBGLDSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GALACTOSE__45__1P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H13O9P/c7-1-2-3(8)4(9)5(10)6(14-2)15-16(11,12)13/h2-10H,1H2,(H2,11,12,13)/p-2/t2-,3+,4+,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__L__45__GLUTAMYL__45__PEPTIDE_c" id="M_5__45__L__45__GLUTAMYL__45__PEPTIDE_c" name="a 5-L-glutamyl-[peptide]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H11N3O6R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Amino__45__Acids_c" id="M_Amino__45__Acids_c" name="an amino acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5__45__L__45__GLUTAMYL__45__AMINO__45__ACID_c" id="M_5__45__L__45__GLUTAMYL__45__AMINO__45__ACID_c" name="an &amp;alpha;-(5-L-glutamyl)-amino acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H10N2O5R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+][C@@H](CCC(=O)NC([*])C([O-])=O)C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_DPG_c" id="M_DPG_c" name="3-phospho-D-glyceroyl-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C3H4O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 262.0076</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)C(=O)OP([O-])([O-])=O</p>
            <p>inchikey: LJQLQCAXBUHEAZ-UWTATZPHSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DPG_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H8O10P2/c4-2(1-12-14(6,7)8)3(5)13-15(9,10)11/h2,4H,1H2,(H2,6,7,8)(H2,9,10,11)/p-4/t2-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__12653_c" id="M_CPD__45__12653_c" name="stearidonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H27O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 275.4063</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/CCCCC([O-])=O</p>
            <p>inchikey: JIWBIWFOSCKQMA-LTKCOYKYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__12653_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C18H28O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h3-4,6-7,9-10,12-13H,2,5,8,11,14-17H2,1H3,(H,19,20)/p-1/b4-3-,7-6-,10-9-,13-12-"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__OXO__45__EICOSAPENTAENOYL__45__ACP_c" id="M_3__45__OXO__45__EICOSAPENTAENOYL__45__ACP_c" name="a (7Z,10Z,13Z,16Z,19Z)-3-oxodocosa-7,10,13,16,19-pentaenoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__8121_c" id="M_CPD__45__8121_c" name="icosatetraenoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CO2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_APS_c" id="M_APS_c" name="adenosine 5&apos;-phosphosulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O10PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 425.27</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OS([O-])(=O)=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: IRLPACMLTUPBCL-KQYNXXCUSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_APS_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H14N5O10PS/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-26(18,19)25-27(20,21)22/h2-4,6-7,10,16-17H,1H2,(H,18,19)(H2,11,12,13)(H,20,21,22)/p-2/t4-,6-,7-,10-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_TREHALOSE__45__6P_c" id="M_TREHALOSE__45__6P_c" name="&amp;alpha;,&amp;alpha;-trehalose 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C12H21O14P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 420.2616</p>
            <p>smiles: OC[C@H]1O[C@H](O[C@H]2O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: LABSPYBHMPDTEL-LIZSDCNHSA-L</p>
          </body>
        </notes>
        <annotation>
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              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Reduced__45__ferredoxins_c" id="M_Reduced__45__ferredoxins_c" name="a reduced ferredoxin [iron-sulfur] cluster" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Oxidized__45__ferredoxins_c" id="M_Oxidized__45__ferredoxins_c" name="an oxidized ferredoxin [iron-sulfur] cluster" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Menaquinols_c" id="M_Menaquinols_c" name="a menaquinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_L__45__ASPARTATE_c" id="M_L__45__ASPARTATE_c" name="L-aspartate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H6NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 132.0953</p>
            <p>smiles: [NH3+][C@@H](CC([O-])=O)C([O-])=O</p>
            <p>inchikey: CKLJMWTZIZZHCS-REOHCLBHSA-M</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_L__45__ASPARTATE_c">
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      <species metaid="M_IMP_c" id="M_IMP_c" name="IMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H11N4O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 346.1912</p>
            <p>smiles: O[C@@H]1[C@@H](COP([O-])([O-])=O)O[C@H]([C@@H]1O)n1cnc2c1nc[nH]c2=O</p>
            <p>inchikey: GRSZFWQUAKGDAV-KQYNXXCUSA-L</p>
          </body>
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            <rdf:Description rdf:about="#M_IMP_c">
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      <species metaid="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" id="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" name="glycerone phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H5O6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 168.0431</p>
            <p>smiles: OCC(=O)COP([O-])([O-])=O</p>
            <p>inchikey: GNGACRATGGDKBX-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
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      <species metaid="M_GTP_c" id="M_GTP_c" name="GTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O14P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 519.1509</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XKMLYUALXHKNFT-UUOKFMHZSA-J</p>
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        <annotation>
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            <rdf:Description rdf:about="#M_GTP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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              </bqbiol:isVersionOf>
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      <species metaid="M_ADENYLOSUCC_c" id="M_ADENYLOSUCC_c" name="adenylo-succinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C14H14N5O11P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 459.2638</p>
            <p>smiles: [H][C@@](CC([O-])=O)(Nc1ncnc2n(cnc12)[C@]1([H])O[C@]([H])(COP([O-])([O-])=O)[C@@]([H])(O)[C@@]1([H])O)C([O-])=O</p>
            <p>inchikey: OFBHPPMPBOJXRT-VWJPMABRSA-J</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_ADENYLOSUCC_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_GLYCEROL__45__3P_c" id="M_GLYCEROL__45__3P_c" name="sn-glycerol 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H7O6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 170.0589</p>
            <p>smiles: OC[C@@H](O)COP([O-])([O-])=O</p>
            <p>inchikey: AWUCVROLDVIAJX-GSVOUGTGSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_GLYCEROL__45__3P_c">
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                </rdf:Bag>
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      <species metaid="M_PAPS_c" id="M_PAPS_c" name="3&apos;-phosphoadenylyl-sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H11N5O13P2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 503.235</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OS([O-])(=O)=O)[C@@H](OP([O-])([O-])=O)[C@H]1O</p>
            <p>inchikey: GACDQMDRPRGCTN-KQYNXXCUSA-J</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_PAPS_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_Mannosyl9__45__Nacetylglucosaminyl2_c" id="M_Mannosyl9__45__Nacetylglucosaminyl2_c" name="Mannosyl9-Nacetylglucosaminyl2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C70H118N2O56">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1883.6657</p>
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            <p>inchikey: DINOPBPYOCMGGD-VEDJBHDQSA-N</p>
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        </notes>
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            <rdf:Description rdf:about="#M_Mannosyl9__45__Nacetylglucosaminyl2_c">
              <bqbiol:isVersionOf>
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      <species metaid="M_CPD__45__341_c" id="M_CPD__45__341_c" name="indole-3-ethanol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 161.2004</p>
            <p>smiles: OCCc1c[nH]c2ccccc12</p>
            <p>inchikey: MBBOMCVGYCRMEA-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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                </rdf:Bag>
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      </species>
      <species metaid="M_3__45__oxo__45__hexanoyl__45__ACPs_c" id="M_3__45__oxo__45__hexanoyl__45__ACPs_c" name="a 3-oxohexanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCC(=O)CC(=O)S[*]</p>
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        </notes>
      </species>
      <species metaid="M_3__45__Oxo__45__octanoyl__45__ACPs_c" id="M_3__45__Oxo__45__octanoyl__45__ACPs_c" name="a 3-oxooctanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCC(=O)CC(=O)S[*]</p>
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        </notes>
      </species>
      <species metaid="M_KYNURENATE_c" id="M_KYNURENATE_c" name="kynurenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H6NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 188.1601</p>
            <p>smiles: Oc1cc(nc2ccccc12)C([O-])=O</p>
            <p>inchikey: HCZHHEIFKROPDY-UHFFFAOYSA-M</p>
          </body>
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        <annotation>
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        </annotation>
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      <species metaid="M_CPD__45__476_c" id="M_CPD__45__476_c" name="4-(2-aminophenyl)-2,4-dioxobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H8NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 206.1754</p>
            <p>smiles: Nc1ccccc1C(=O)CC(=O)C([O-])=O</p>
            <p>inchikey: CAOVWYZQMPNAFJ-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__476_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H9NO4/c11-7-4-2-1-3-6(7)8(12)5-9(13)10(14)15/h1-4H,5,11H2,(H,14,15)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__11552_c" id="M_CPD__45__11552_c" name="4-(2-amino-3-hydroxyphenyl)-2,4-dioxobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H8NO5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 222.1748</p>
            <p>smiles: Nc1c(O)cccc1C(=O)CC(=O)C([O-])=O</p>
            <p>inchikey: YCJNYHCCOXVYAF-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__11552_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H9NO5/c11-9-5(2-1-3-6(9)12)7(13)4-8(14)10(15)16/h1-3,12H,4,11H2,(H,15,16)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Octanoyl__45__ACPs_c" id="M_Octanoyl__45__ACPs_c" name="an octanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_3__45__HYDROXY__45__L__45__KYNURENINE_c" id="M_3__45__HYDROXY__45__L__45__KYNURENINE_c" name="3-hydroxy-L-kynurenine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N2O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 224.2133</p>
            <p>smiles: Nc1c(O)cccc1C(=O)C[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: VCKPUUFAIGNJHC-LURJTMIESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__HYDROXY__45__L__45__KYNURENINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__14042_c" id="M_CPD__45__14042_c" name="(2R)-naringenin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 272.2528</p>
            <p>smiles: Oc1ccc(cc1)[C@H]1CC(=O)c2c(O)cc(O)cc2O1</p>
            <p>inchikey: FTVWIRXFELQLPI-CYBMUJFWSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__14042_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C15H12O5/c16-9-3-1-8(2-4-9)13-7-12(19)15-11(18)5-10(17)6-14(15)20-13/h1-6,13,16-18H,7H2/t13-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_XANTHURENATE_c" id="M_XANTHURENATE_c" name="xanthurenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H6NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 204.1595</p>
            <p>smiles: Oc1cccc2c(O)cc(nc12)C([O-])=O</p>
            <p>inchikey: FBZONXHGGPHHIY-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_XANTHURENATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H7NO4/c12-7-3-1-2-5-8(13)4-6(10(14)15)11-9(5)7/h1-4,12H,(H,11,13)(H,14,15)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15886_c" id="M_CPD__45__15886_c" name="(-)-dihydrokaempferol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 288.2522</p>
            <p>smiles: O[C@H]1[C@@H](Oc2cc(O)cc(O)c2C1=O)c1ccc(O)cc1</p>
            <p>inchikey: PADQINQHPQKXNL-CABCVRRESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15886_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__8259_c" id="M_CPD__45__8259_c" name="&amp;beta;-D-ribosylnicotinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H13NO6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 255.224</p>
            <p>smiles: OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n+]1cccc(c1)C([O-])=O</p>
            <p>inchikey: PUEDDPCUCPRQNY-ZYUZMQFOSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__8259_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__3618_c" id="M_CPD__45__3618_c" name="2-oxovalerate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H7O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 115.1078</p>
            <p>smiles: CCCC(=O)C([O-])=O</p>
            <p>inchikey: KDVFRMMRZOCFLS-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__3618_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H8O3/c1-2-3-4(6)5(7)8/h2-3H2,1H3,(H,7,8)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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      </species>
      <species metaid="M_CPD__45__7836_c" id="M_CPD__45__7836_c" name="CPD-7836" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C14H27O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 227.3635</p>
            <p>smiles: CCCCCCCCCCCCCC([O-])=O</p>
            <p>inchikey: TUNFSRHWOTWDNC-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__7836_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C14H28O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14(15)16/h2-13H2,1H3,(H,15,16)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__1130_c" id="M_CPD__45__1130_c" name="3-ethylmalate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H8O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 160.1258</p>
            <p>smiles: CCC(C(O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: JUCRENBZZQKFGK-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__1130_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NICOTINATE_NUCLEOTIDE_c" id="M_NICOTINATE_NUCLEOTIDE_c" name="&amp;beta;-nicotinate D-ribonucleotide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C11H12NO9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 333.1891</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP([O-])([O-])=O)[n+]1cccc(c1)C([O-])=O</p>
            <p>inchikey: JOUIQRNQJGXQDC-ZYUZMQFOSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_NICOTINATE_NUCLEOTIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C11H14NO9P/c13-8-7(5-20-22(17,18)19)21-10(9(8)14)12-3-1-2-6(4-12)11(15)16/h1-4,7-10,13-14H,5H2,(H2-,15,16,17,18,19)/p-2/t7-,8-,9-,10-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_XYLITOL_c" id="M_XYLITOL_c" name="xylitol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H12O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 152.1458</p>
            <p>smiles: OC[C@H](O)[C@@H](O)[C@H](O)CO</p>
            <p>inchikey: HEBKCHPVOIAQTA-SCDXWVJYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_XYLITOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__Xylopyranose_c" id="M_D__45__Xylopyranose_c" name="D-xylopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.1299</p>
            <p>smiles: O[C@@H]1COC(O)[C@H](O)[C@H]1O</p>
            <p>inchikey: SRBFZHDQGSBBOR-IOVATXLUSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_D__45__Xylopyranose_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_METHYLARSONITE_c" id="M_METHYLARSONITE_c" name="methylarsonite" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CH5AsO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 123.9708</p>
            <p>smiles: C[As](O)O</p>
            <p>inchikey: OXBIRPQQKCQWGV-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_METHYLARSONITE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CH5AsO2/c1-2(3)4/h3-4H,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIMETHYLARSINATE_c" id="M_DIMETHYLARSINATE_c" name="cacodylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2H6AsO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 136.99</p>
            <p>smiles: C[As](C)([O-])=O</p>
            <p>inchikey: OGGXGZAMXPVRFZ-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_DIMETHYLARSINATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H7AsO2/c1-3(2,4)5/h1-2H3,(H,4,5)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2__45__AMINOACRYLATE_c" id="M_2__45__AMINOACRYLATE_c" name="2-aminoprop-2-enoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 87.0773</p>
            <p>smiles: [NH3+]C(=C)C([O-])=O</p>
            <p>inchikey: UQBOJOOOTLPNST-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2__45__AMINOACRYLATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H5NO2/c1-2(4)3(5)6/h1,4H2,(H,5,6)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__7670_c" id="M_CPD__45__7670_c" name="dimethyl sulfide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H6S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 62.134</p>
            <p>smiles: CSC</p>
            <p>inchikey: QMMFVYPAHWMCMS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__7670_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H6S/c1-3-2/h1-2H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_TRIMETHYLSULFONIUM_c" id="M_TRIMETHYLSULFONIUM_c" name="trimethyl sulfonium" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H9S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 77.168</p>
            <p>smiles: C[S+](C)C</p>
            <p>inchikey: NRZWQKGABZFFKE-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_TRIMETHYLSULFONIUM_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H9S/c1-4(2)3/h1-3H3/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__METHYL__45__THF__45__GLU__45__N_c" id="M_5__45__METHYL__45__THF__45__GLU__45__N_c" name="a 5-methyltetrahydrofolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H23N7O5R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@]1(CNc2ccc(cc2)C(=O)N[C@@H](CCC([*])=O)C([O-])=O)CNc2nc(N)[nH]c(=O)c2N1C</p>
          </body>
        </notes>
      </species>
      <species metaid="M_tRNA__45__guanosine18_c" id="M_tRNA__45__guanosine18_c" name="a guanosine18 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2__45__O__45__Methylguanosine18_c" id="M_2__45__O__45__Methylguanosine18_c" name="a 2&apos;-O-methylguanosine18 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_C3_c" id="M_C3_c" name="UDP-N-acetyl-&amp;alpha;-D-muramoyl-L-alanyl-&amp;gamma;-D-glutamyl-L-lysyl-D-alanyl-D-alanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C40H62N9O26P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1146.9141</p>
            <p>smiles: C[C@@H](NC(=O)[C@@H](C)NC(=O)[C@H](CCCC[NH3+])NC(=O)CC[C@@H](NC(=O)[C@H](C)NC(=O)[C@@H](C)O[C@H]1[C@H](O)[C@@H](CO)O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2ccc(=O)[nH]c2=O)[C@@H]1NC(C)=O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: PFMVORMCVGOQKR-XNCOKRRHSA-K</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_C3_c">
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              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__9646_c" id="M_CPD__45__9646_c" name="di-trans,octa-cis-undecaprenyl phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C55H89O4P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 845.2676</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/COP([O-])([O-])=O</p>
            <p>inchikey: UFPHFKCTOZIAFY-NTDVEAECSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__9646_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_C4_c" id="M_C4_c" name="undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-&amp;gamma;-D-glutamyl-L-lysyl- D-alanyl-D-alanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C86H140N7O21P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1670.0153</p>
            <p>smiles: C[C@@H](NC(=O)[C@@H](C)NC(=O)[C@H](CCCC[NH3+])NC(=O)CC[C@@H](NC(=O)[C@H](C)NC(=O)[C@@H](C)O[C@H]1[C@H](O)[C@@H](CO)O[C@H](OP([O-])(=O)OP([O-])(=O)OC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C)[C@@H]1NC(C)=O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: SULOOAFLXMQJSF-OGDYFQGPSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_UMP_c" id="M_UMP_c" name="UMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H11N2O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 322.1665</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP([O-])([O-])=O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: DJJCXFVJDGTHFX-XVFCMESISA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_UMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H13N2O9P/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,10,12,15)(H2,16,17,18)/p-2/t4-,6-,7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_m7G5__45__pppR__45__mRNAs_c" id="M_m7G5__45__pppR__45__mRNAs_c" name="a 5&apos;-(N7-methyl 5&apos;-triphosphoguanosine)-(purine-ribonucleotide)-[mRNA]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_m7G5__45__pppRm__45__mRNAs_c" id="M_m7G5__45__pppRm__45__mRNAs_c" name="a 5&apos;-(N7-methyl 5&apos;-triphosphoguanosine)-(2&apos;-O-methyl-purine-ribonucleotide)-[mRNA]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DNA__45__6__45__O__45__Methyl__45__Guanines_c" id="M_DNA__45__6__45__O__45__Methyl__45__Guanines_c" name="an O6-methylguanine in DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PROT__45__CYS_c" id="M_PROT__45__CYS_c" name="a [protein]-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DNA__45__Guanines_c" id="M_DNA__45__Guanines_c" name="a guanine in DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Protein__45__S__45__methyl__45__L__45__cysteine_c" id="M_Protein__45__S__45__methyl__45__L__45__cysteine_c" name="a [protein]-S-methyl-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8N2O2R2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Uracil__45__54__45__in__45__tRNA_c" id="M_Uracil__45__54__45__in__45__tRNA_c" name="a uracil54 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H10N2O12P2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@@H]1[C@H](OP([O-])(=O)O*)[C@@H](COP([O-])(=O)O*)O[C@H]1n1ccc(=O)[nH]c1=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_FADH2_c" id="M_FADH2_c" name="FADH2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C27H33N9O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 785.5508</p>
            <p>smiles: Cc1cc2Nc3c([nH]c(=O)[nH]c3=O)N(C[C@H](O)[C@H](O)[C@H](O)COP([O-])(=O)OP([O-])(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n3cnc4c(N)ncnc34)c2cc1C</p>
            <p>inchikey: YPZRHBJKEMOYQH-UYBVJOGSSA-L</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FADH2_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__1137_c" id="M_CPD__45__1137_c" name="itaconyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C26H35N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 874.581</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CC(=C)C([O-])=O</p>
            <p>inchikey: NFVGYLGSSJPRKW-CITAKDKDSA-I</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__1137_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_tRNA__45__containing__45__5Me__45__uridine54_c" id="M_tRNA__45__containing__45__5Me__45__uridine54_c" name="a 5-methyluracil54 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ITACONATE_c" id="M_ITACONATE_c" name="itaconate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 128.084</p>
            <p>smiles: [O-]C(=O)CC(=C)C([O-])=O</p>
            <p>inchikey: LVHBHZANLOWSRM-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ITACONATE_c">
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      <species metaid="M_FAD_c" id="M_FAD_c" name="FAD" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C27H30N9O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 782.5276</p>
            <p>smiles: Cc1cc2nc3c(nc(=O)[n-]c3=O)n(C[C@H](O)[C@H](O)[C@H](O)COP([O-])(=O)OP([O-])(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n3cnc4c(N)ncnc34)c2cc1C</p>
            <p>inchikey: IMGVNJNCCGXBHD-UYBVJOGSSA-K</p>
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        <annotation>
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            <rdf:Description rdf:about="#M_FAD_c">
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        </annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1013.881</p>
            <p>smiles: CCCCCC\C=C/CCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: JDNARGYWMLYADA-MDMKAECGSA-J</p>
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        </notes>
        <annotation>
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      <species metaid="M_Reduced__45__NrdH__45__Proteins_c" id="M_Reduced__45__NrdH__45__Proteins_c" name="a reduced NrdH glutaredoxin-like protein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__19147_c" id="M_CPD__45__19147_c" name="(7Z)-tetradecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H56N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 971.844</p>
            <p>smiles: CCCCCC\C=C/CCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: JPIHVKICKVPFFY-TWAFKMGKSA-J</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        </annotation>
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      <species metaid="M_CPD__45__19154_c" id="M_CPD__45__19154_c" name="(S)-3-hydroxy-(7Z)-tetradecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H56N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 987.844</p>
            <p>smiles: CCCCCC\C=C/CCC[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: WGCARZJTIJIWSL-JCJYIPITSA-J</p>
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        </notes>
        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 969.828</p>
            <p>smiles: CCCCCC\C=C/CCC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: MWKSUVQQMPJTPP-DTPVMWFYSA-J</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CHOLINE_c" id="M_CHOLINE_c" name="choline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H14NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 104.1702</p>
            <p>smiles: C[N+](C)(C)CCO</p>
            <p>inchikey: OEYIOHPDSNJKLS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CHOLINE_c">
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      <species metaid="M_CPD__45__19157_c" id="M_CPD__45__19157_c" name="3-oxo-(7Z)-tetradecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H54N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 985.828</p>
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            <p>inchikey: BEPLLRGJVXAEJI-TWAFKMGKSA-J</p>
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        <annotation>
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      <species metaid="M_CPD__45__9247_e" id="M_CPD__45__9247_e" name="cis-vaccenate" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H33O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 281.454</p>
            <p>smiles: CCCCCC\C=C/CCCCCCCCCC([O-])=O</p>
            <p>inchikey: UWHZIFQPPBDJPM-FPLPWBNLSA-M</p>
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      </species>
      <species metaid="M_CPD__45__18346_c" id="M_CPD__45__18346_c" name="cis-vaccenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H64N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1027.951</p>
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            <p>inchikey: HEJOXXLSCAQQGQ-SAIINBSPSA-J</p>
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        </notes>
        <annotation>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__19148_c" id="M_CPD__45__19148_c" name="(5Z)-dodecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C33H52N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 943.791</p>
            <p>smiles: CCCCCC\C=C/CCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: RCVJZGBRLGUTKT-CGGPSVLLSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__19148_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C33H56N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-24(42)61-17-16-35-23(41)14-15-36-31(45)28(44)33(2,3)19-54-60(51,52)57-59(49,50)53-18-22-27(56-58(46,47)48)26(43)32(55-22)40-21-39-25-29(34)37-20-38-30(25)40/h9-10,20-22,26-28,32,43-44H,4-8,11-19H2,1-3H3,(H,35,41)(H,36,45)(H,49,50)(H,51,52)(H2,34,37,38)(H2,46,47,48)/p-4/b10-9-/t22-,26-,27-,28+,32-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_OLEOYL__45__COA_c" id="M_OLEOYL__45__COA_c" name="oleoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H64N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1027.951</p>
            <p>smiles: CCCCCCCC\C=C/CCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: XDUHQPOXLUAVEE-BPMMELMSSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OLEOYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C39H68N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-30(48)67-23-22-41-29(47)20-21-42-37(51)34(50)39(2,3)25-60-66(57,58)63-65(55,56)59-24-28-33(62-64(52,53)54)32(49)38(61-28)46-27-45-31-35(40)43-26-44-36(31)46/h11-12,26-28,32-34,38,49-50H,4-10,13-25H2,1-3H3,(H,41,47)(H,42,51)(H,55,56)(H,57,58)(H2,40,43,44)(H2,52,53,54)/p-4/b12-11-/t28-,32-,33-,34+,38-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Cellular__45__Retinol__45__Binding__45__Proteins_c" id="M_Cellular__45__Retinol__45__Binding__45__Proteins_c" name="a cellular-retinol-binding protein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_RETINOATE_c" id="M_RETINOATE_c" name="all-trans-retinoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H27O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 299.4277</p>
            <p>smiles: C\C(\C=C\C1=C(C)CCCC1(C)C)=C/C=C/C(/C)=C/C([O-])=O</p>
            <p>inchikey: SHGAZHPCJJPHSC-YCNIQYBTSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_RETINOATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/p-1/b9-6+,12-11+,15-8+,16-14+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__Cysteine__45__Desulfurase__45__persulfide_c" id="M_L__45__Cysteine__45__Desulfurase__45__persulfide_c" name="an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H6NOS2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: SSC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Cysteine__45__Desulfurase__45__L__45__cysteine_c" id="M_Cysteine__45__Desulfurase__45__L__45__cysteine_c" name="an [L-cysteine desulfurase]-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H6NOSR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: SC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CYS_c" id="M_CYS_c" name="L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 121.158</p>
            <p>smiles: [NH3+][C@@H](CS)C([O-])=O</p>
            <p>inchikey: XUJNEKJLAYXESH-REOHCLBHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CYS_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__ALPHA__45__ALANINE_c" id="M_L__45__ALPHA__45__ALANINE_c" name="L-alanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 89.0932</p>
            <p>smiles: C[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: QNAYBMKLOCPYGJ-REOHCLBHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__ALPHA__45__ALANINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO2/c1-2(4)3(5)6/h2H,4H2,1H3,(H,5,6)/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_THIAMINE__45__P_c" id="M_THIAMINE__45__P_c" name="thiamine phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H16N4O4PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 343.319</p>
            <p>smiles: Cc1c(CCOP([O-])([O-])=O)sc[n+]1Cc1cnc(C)nc1N</p>
            <p>inchikey: HZSAJDVWZRBGIF-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_THIAMINE__45__P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H17N4O4PS/c1-8-11(3-4-20-21(17,18)19)22-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H3-,13,14,15,17,18,19)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__13576_c" id="M_CPD__45__13576_c" name="2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C7H7NO6PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 264.174</p>
            <p>smiles: Cc1nc(sc1CCOP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: XWECMAHAKFWYNV-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__13576_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H10NO6PS/c1-4-5(2-3-14-15(11,12)13)16-6(8-4)7(9)10/h2-3H2,1H3,(H,9,10)(H2,11,12,13)/p-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_AMINO__45__HYDROXYMETHYL__45__METHYLPYRIMIDINE__45__PP_c" id="M_AMINO__45__HYDROXYMETHYL__45__METHYLPYRIMIDINE__45__PP_c" name="4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H8N3O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 296.0928</p>
            <p>smiles: Cc1ncc(COP([O-])(=O)OP([O-])([O-])=O)c(N)n1</p>
            <p>inchikey: AGQJQCFEPUVXNK-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AMINO__45__HYDROXYMETHYL__45__METHYLPYRIMIDINE__45__PP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H11N3O7P2/c1-4-8-2-5(6(7)9-4)3-15-18(13,14)16-17(10,11)12/h2H,3H2,1H3,(H,13,14)(H2,7,8,9)(H2,10,11,12)/p-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ACYL__45__COA_c" id="M_ACYL__45__COA_c" name="an acyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C22H31N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Triacylglycerols_c" id="M_Triacylglycerols_c" name="a triacyl-sn-glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O6R3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]C(=O)OCC(COC([*])=O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_5__45__PHOSPHO__45__RIBOSYL__45__GLYCINEAMIDE_c" id="M_5__45__PHOSPHO__45__RIBOSYL__45__GLYCINEAMIDE_c" name="N1-(5-phospho-&amp;beta;-D-ribosyl)glycinamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H14N2O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 285.169</p>
            <p>smiles: [NH3+]CC(=O)NC1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: OBQMLSFOUZUIOB-HJZCUYRDSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__PHOSPHO__45__RIBOSYL__45__GLYCINEAMIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H15N2O8P/c8-1-4(10)9-7-6(12)5(11)3(17-7)2-16-18(13,14)15/h3,5-7,11-12H,1-2,8H2,(H,9,10)(H2,13,14,15)/p-1/t3-,5-,6-,7?/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__P__45__RIBOSYL__45__N__45__FORMYLGLYCINEAMIDE_c" id="M_5__45__P__45__RIBOSYL__45__N__45__FORMYLGLYCINEAMIDE_c" name="N2-formyl-N1-(5-phospho-&amp;beta;-D-ribosyl)glycinamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C8H13N2O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 312.1717</p>
            <p>smiles: O[C@H]1[C@@H](O)C(NC(=O)CNC=O)O[C@@H]1COP([O-])([O-])=O</p>
            <p>inchikey: VDXLUNDMVKSKHO-ZRTZXPPTSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__P__45__RIBOSYL__45__N__45__FORMYLGLYCINEAMIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H15N2O9P/c11-3-9-1-5(12)10-8-7(14)6(13)4(19-8)2-18-20(15,16)17/h3-4,6-8,13-14H,1-2H2,(H,9,11)(H,10,12)(H2,15,16,17)/p-2/t4-,6-,7-,8?/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_METHYLENE__45__THF__45__GLU__45__N_c" id="M_METHYLENE__45__THF__45__GLU__45__N_c" name="a 5,10-methylenetetrahydrofolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_L__45__PHOSPHATIDATE_c" id="M_L__45__PHOSPHATIDATE_c" name="a 1,2-diacyl-sn-glycerol 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H16N3O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 286.2618</p>
            <p>smiles: [NH3+][C@@H](CC([O-])=O)C(=O)NCC(=O)N1CCC[C@H]1C([O-])=O</p>
            <p>inchikey: POTCZYQVVNXUIG-BQBZGAKWSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__PHOSPHATIDATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C11H17N3O6/c12-6(4-9(16)17)10(18)13-5-8(15)14-3-1-2-7(14)11(19)20/h6-7H,1-5,12H2,(H,13,18)(H,16,17)(H,19,20)/p-1/t6-,7-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Beta__45__Lactams_c" id="M_Beta__45__Lactams_c" name="a &amp;beta;-lactam" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__8550_c" id="M_CPD__45__8550_c" name="a substituted &amp;beta;-amino acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_B__45__ALANINE_c" id="M_B__45__ALANINE_c" name="&amp;beta;-alanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 89.0932</p>
            <p>smiles: [NH3+]CCC([O-])=O</p>
            <p>inchikey: UCMIRNVEIXFBKS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_B__45__ALANINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO2/c4-2-1-3(5)6/h1-2,4H2,(H,5,6)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__UREIDO__45__PROPIONATE_c" id="M_3__45__UREIDO__45__PROPIONATE_c" name="3-ureidopropanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H7N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 131.1105</p>
            <p>smiles: NC(=O)NCCC([O-])=O</p>
            <p>inchikey: JSJWCHRYRHKBBW-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__UREIDO__45__PROPIONATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H8N2O3/c5-4(9)6-2-1-3(7)8/h1-2H2,(H,7,8)(H3,5,6,9)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15972_c" id="M_CPD__45__15972_c" name="CPD-15972" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 342.2965</p>
            <p>smiles: OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)C(O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: GUBGYTABKSRVRQ-QKKXKWKRSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15972_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H22O11/c13-1-3-5(15)6(16)9(19)12(22-3)23-10-4(2-14)21-11(20)8(18)7(10)17/h3-20H,1-2H2/t3-,4-,5+,6+,7-,8-,9-,10-,11?,12+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DsrC__45__L__45__Cysteine_c" id="M_DsrC__45__L__45__Cysteine_c" name="DsrC-L-Cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C6H11N2O2S2R3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: SC[C@H](N*)C(=O)[*][NH2+][C@@H](CS)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_DsrC__45__disulfide__45__form_c" id="M_DsrC__45__disulfide__45__form_c" name="DsrC-disulfide-form" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ACETYLSERINE_c" id="M_ACETYLSERINE_c" name="O-acetyl-L-serine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 147.1293</p>
            <p>smiles: CC(=O)OC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: VZXPDPZARILFQX-BYPYZUCNSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ACETYLSERINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H9NO4/c1-3(7)10-2-4(6)5(8)9/h4H,2,6H2,1H3,(H,8,9)/t4-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_S2O3_c" id="M_S2O3_c" name="thiosulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="HO3S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 113.137</p>
            <p>smiles: [H]SS([O-])(=O)=O</p>
            <p>inchikey: DHCDFWKWKRSZHF-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_S2O3_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O3S2/c1-5(2,3)4/h(H2,1,2,3,4)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_SULFO__45__CYSTEINE_c" id="M_SULFO__45__CYSTEINE_c" name="S-sulfo-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H6NO5S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 200.214</p>
            <p>smiles: [NH3+][C@@H](CSS([O-])(=O)=O)C([O-])=O</p>
            <p>inchikey: NOKPBJYHPHHWAN-REOHCLBHSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SULFO__45__CYSTEINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO5S2/c4-2(3(5)6)1-10-11(7,8)9/h2H,1,4H2,(H,5,6)(H,7,8,9)/p-1/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ACET_c" id="M_ACET_c" name="acetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2H3O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 59.0446</p>
            <p>smiles: CC([O-])=O</p>
            <p>inchikey: QTBSBXVTEAMEQO-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ACET_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H4O2/c1-2(3)4/h1H3,(H,3,4)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DADP_c" id="M_DADP_c" name="dADP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O9P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 408.1795</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@H]1C[C@H](O)[C@@H](COP([O-])(=O)OP([O-])([O-])=O)O1</p>
            <p>inchikey: DAEAPNUQQAICNR-RRKCRQDMSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DADP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H15N5O9P2/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(23-7)2-22-26(20,21)24-25(17,18)19/h3-7,16H,1-2H2,(H,20,21)(H2,11,12,13)(H2,17,18,19)/p-3/t5-,6+,7+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Ox__45__Thioredoxin_c" id="M_Ox__45__Thioredoxin_c" name="an oxidized thioredoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C6H9N2O2S2R4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]N[C@@H](CSSC[C@H]([NH2+][*])C([*])=O)C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Red__45__Thioredoxin_c" id="M_Red__45__Thioredoxin_c" name="a reduced thioredoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10N2O2S2R4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5__45__HYDROXYINDOLE_ACETATE_c" id="M_5__45__HYDROXYINDOLE_ACETATE_c" name="5-hydroxyindole acetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H8NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 190.176</p>
            <p>smiles: Oc1ccc2[nH]cc(CC([O-])=O)c2c1</p>
            <p>inchikey: DUUGKQCEGZLZNO-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__HYDROXYINDOLE_ACETATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H9NO3/c12-7-1-2-9-8(4-7)6(5-11-9)3-10(13)14/h1-2,4-5,11-12H,3H2,(H,13,14)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ADP__45__SUGARS_c" id="M_ADP__45__SUGARS_c" name="an ADP-sugar" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__11555_c" id="M_CPD__45__11555_c" name="CPD-11555" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C16H13O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 317.2708</p>
            <p>smiles: CC1(O)CC(=O)c2c(Cc3cc([O-])cc(=O)o3)cc(O)cc2O1</p>
            <p>inchikey: WFNZGUNBSCUXFX-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__11555_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C16H14O7/c1-16(21)7-12(19)15-8(2-9(17)5-13(15)23-16)3-11-4-10(18)6-14(20)22-11/h2,4-6,17-18,21H,3,7H2,1H3/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MALONYL__45__COA_c" id="M_MALONYL__45__COA_c" name="malonyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C24H33N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 848.543</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CC([O-])=O</p>
            <p>inchikey: LTYOQGRJFJAKNA-DVVLENMVSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MALONYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C24H38N7O19P3S/c1-24(2,19(37)22(38)27-4-3-13(32)26-5-6-54-15(35)7-14(33)34)9-47-53(44,45)50-52(42,43)46-8-12-18(49-51(39,40)41)17(36)23(48-12)31-11-30-16-20(25)28-10-29-21(16)31/h10-12,17-19,23,36-37H,3-9H2,1-2H3,(H,26,32)(H,27,38)(H,33,34)(H,42,43)(H,44,45)(H2,25,28,29)(H2,39,40,41)/p-5/t12-,17-,18-,19+,23-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_LysW__45__L__45__glutamate_c" id="M_LysW__45__L__45__glutamate_c" name="a [lysine-biosynthesis-protein LysW]-C-terminal-&amp;gamma;-(L-glutamyl)-L-glutamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H13N2O7R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)CC[C@H](NC(=O)CC[C@H]([NH2+]*)C([O-])=O)C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__734_c" id="M_CPD__45__734_c" name="(-)-jasmonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H17O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 209.2621</p>
            <p>smiles: CC\C=C/C[C@@H]1[C@@H](CC([O-])=O)CCC1=O</p>
            <p>inchikey: ZNJFBWYDHIGLCU-HWKXXFMVSA-M</p>
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      <species metaid="M_LysW__45__L__45__glutamate__45__5__45__phosphate_c" id="M_LysW__45__L__45__glutamate__45__5__45__phosphate_c" name="a [lysine-biosynthesis-protein LysW]-C-terminal-&amp;gamma;-(5-phospho-L-glutamyl)-L-glutamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H13N2O10PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)[C@H](CCC(=O)OP([O-])([O-])=O)NC(=O)CC[C@H]([NH2+]*)C([O-])=O</p>
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        </notes>
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      <species metaid="M_CPD__45__9451_c" id="M_CPD__45__9451_c" name="2-isopropylmaleate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H8O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 156.1371</p>
            <p>smiles: CC(C)C(=C\C([O-])=O)\C([O-])=O</p>
            <p>inchikey: NJMGRJLQRLFQQX-HYXAFXHYSA-L</p>
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      <species metaid="M_METOH_c" id="M_METOH_c" name="methanol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 32.0419</p>
            <p>smiles: CO</p>
            <p>inchikey: OKKJLVBELUTLKV-UHFFFAOYSA-N</p>
          </body>
        </notes>
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      <species metaid="M_UNDECAPRENYL__45__DIPHOSPHATE_c" id="M_UNDECAPRENYL__45__DIPHOSPHATE_c" name="di-trans,octa-cis-undecaprenyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C55H89O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 924.2401</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/COP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: NTXGVHCCXVHYCL-NTDVEAECSA-K</p>
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      <species metaid="M_LysW__45__L__45__glutamate__45__5__45__semialdehyde_c" id="M_LysW__45__L__45__glutamate__45__5__45__semialdehyde_c" name="a [lysine-biosynthesis-protein LysW]-C-terminal-&amp;gamma;-(L-glutamate 5-semialdehyde-2-yl)-L-glutamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H14N2O6R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H]C(=O)CC[C@H](NC(=O)CC[C@H]([NH2+]*)C([O-])=O)C([O-])=O</p>
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        </notes>
      </species>
      <species metaid="M_DELTA3__45__ISOPENTENYL__45__PP_c" id="M_DELTA3__45__ISOPENTENYL__45__PP_c" name="isopentenyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C5H9O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 243.0699</p>
            <p>smiles: CC(=C)CCOP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: NUHSROFQTUXZQQ-UHFFFAOYSA-K</p>
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            <rdf:Description rdf:about="#M_DELTA3__45__ISOPENTENYL__45__PP_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_UDP__45__GLUCURONATE_c" id="M_UDP__45__GLUCURONATE_c" name="UDP-&amp;alpha;-D-glucuronate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C15H19N2O18P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 577.2631</p>
            <p>smiles: O[C@@H]1[C@@H](COP([O-])(=O)OP([O-])(=O)O[C@H]2O[C@@H]([C@@H](O)[C@H](O)[C@H]2O)C([O-])=O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: HDYANYHVCAPMJV-LXQIFKJMSA-K</p>
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        </notes>
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                </rdf:Bag>
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      </species>
      <species metaid="M_CPD__45__9460_c" id="M_CPD__45__9460_c" name="oleanolate 3 &amp;beta;-D-glucuronoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C36H54O9">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 630.8097</p>
            <p>smiles: [H][C@@]12CC(C)(C)CC[C@@]1(CC[C@]1(C)C2=CC[C@]2([H])[C@@]3(C)CC[C@H](O[C@@H]4O[C@@H]([C@@H](O)[C@H](O)[C@H]4O)C([O-])=O)C(C)(C)[C@]3([H])CC[C@@]12C)C([O-])=O</p>
            <p>inchikey: IUCHKMAZAWJNBJ-RCYXVVTDSA-L</p>
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      <species metaid="M_tRNA__45__precursors_c" id="M_tRNA__45__precursors_c" name="a tRNA precursor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_LysW__45__L__45__ornithine_c" id="M_LysW__45__L__45__ornithine_c" name="a [lysine-biosynthesis-protein LysW]-C-terminal-&amp;gamma;-(L-ornithyl)-L-glutamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H18N3O5R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]CCC[C@H](NC(=O)CC[C@H]([NH2+]*)C([O-])=O)C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__9459_c" id="M_CPD__45__9459_c" name="oleanolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C30H47O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 455.6929</p>
            <p>smiles: [H][C@@]12CC(C)(C)CC[C@@]1(CC[C@]1(C)C2=CC[C@]2([H])[C@@]3(C)CC[C@H](O)C(C)(C)[C@]3([H])CC[C@@]12C)C([O-])=O</p>
            <p>inchikey: MIJYXULNPSFWEK-GTOFXWBISA-M</p>
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      <species metaid="M_tRNAs__45__with__45__CCA_c" id="M_tRNAs__45__with__45__CCA_c" name="a tRNA containing a 3&apos; CCA end" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_3__45__HEXAPRENYL__45__4__45__HYDROXYBENZOATE_c" id="M_3__45__HEXAPRENYL__45__4__45__HYDROXYBENZOATE_c" name="3-hexaprenyl-4-hydroxybenzoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C37H53O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 545.8155</p>
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      <species metaid="M_PHOSPHATIDYLCHOLINE_c" id="M_PHOSPHATIDYLCHOLINE_c" name="a phosphatidylcholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_ALL__45__TRANS__45__HEXAPRENYL__45__DIPHOSPHATE_c" id="M_ALL__45__TRANS__45__HEXAPRENYL__45__DIPHOSPHATE_c" name="all-trans-hexaprenyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C30H49O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 583.655</p>
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      <species metaid="M_4__45__hydroxybenzoate_c" id="M_4__45__hydroxybenzoate_c" name="4-hydroxybenzoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 137.1133</p>
            <p>smiles: Oc1ccc(cc1)C([O-])=O</p>
            <p>inchikey: FJKROLUGYXJWQN-UHFFFAOYSA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 281.454</p>
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            <p>inchikey: ZQPPMHVWECSIRJ-KTKRTIGZSA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 479.5876</p>
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        <notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 959.791</p>
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        <notes>
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            <p>mass: 941.775</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 281.454</p>
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      <species metaid="M_PROTEIN__45__L__45__BETA__45__ISOASPARTATES_c" id="M_PROTEIN__45__L__45__BETA__45__ISOASPARTATES_c" name="a [protein]-L-&amp;beta;-isoaspartate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_PROTEIN__45__L__45__BETA__45__ISOSPARTATE__45__METHYL__45__ESTERS_c" id="M_PROTEIN__45__L__45__BETA__45__ISOSPARTATE__45__METHYL__45__ESTERS_c" name="a protein L-&amp;beta;-isoaspartate &amp;alpha;-methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 957.775</p>
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        <annotation>
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      <species metaid="M_3__45__OXOPALMITOYL__45__COA_c" id="M_3__45__OXOPALMITOYL__45__COA_c" name="3-oxo-palmitoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H60N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1015.897</p>
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            <p>inchikey: NQMPLXPCRJOSHL-BBECNAHFSA-J</p>
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        </notes>
        <annotation>
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      <species metaid="M_TETRADECANOYL__45__COA_c" id="M_TETRADECANOYL__45__COA_c" name="myristoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H58N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 973.86</p>
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        </notes>
        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 915.738</p>
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        <annotation>
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      <species metaid="M_ISOBUTYRYL__45__COA_c" id="M_ISOBUTYRYL__45__COA_c" name="isobutanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H38N7O17P3S">
        <notes>
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            <p>mass: 833.594</p>
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            <p>inchikey: AEWHYWSPVRZHCT-NDZSKPAWSA-J</p>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BCAA__45__dehydrogenase__45__DH__45__lipoyl_c" id="M_BCAA__45__dehydrogenase__45__DH__45__lipoyl_c" name="an [apo BCAA dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15OS2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_BCAA__45__dehydrogenase__45__2MP__45__DH__45__lipoyl_c" id="M_BCAA__45__dehydrogenase__45__2MP__45__DH__45__lipoyl_c" name="an [apo BCAA dehydrogenase E2 protein] N6-S-[2-methylpropanoyl]dihydrolipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H21O2S2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__9245_e" id="M_CPD__45__9245_e" name="palmitoleate" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C16H29O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 253.4008</p>
            <p>smiles: CCCCCC\C=C/CCCCCCCC([O-])=O</p>
            <p>inchikey: SECPZKHBENQXJG-FPLPWBNLSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__9245_e">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C16H30O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16(17)18/h7-8H,2-6,9-15H2,1H3,(H,17,18)/p-1/b8-7-"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Long__45__linear__45__glucans_c" id="M_Long__45__linear__45__glucans_c" name="a long-linear &amp;alpha;-D-glucan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__202_c" id="M_CPD__45__202_c" name="choloyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H70N7O20P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1154.061</p>
            <p>smiles: [H][C@@](C)(CCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@H](O)C[C@]4([H])C[C@H](O)CC[C@]4(C)[C@@]3([H])C[C@H](O)[C@]12C</p>
            <p>inchikey: ZKWNOTQHFKYUNU-JGCIYWTLSA-J</p>
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        </notes>
        <annotation>
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                </rdf:Bag>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__7257_c" id="M_CPD__45__7257_c" name="3&amp;alpha;,7&amp;alpha;,12&amp;alpha;-trihydroxy-24-oxo-5-&amp;beta;-cholestanoyl CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C48H74N7O21P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1210.124</p>
            <p>smiles: [H][C@@](C)(CCC(=O)C(C)C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@H](O)C[C@]4([H])C[C@H](O)CC[C@]4(C)[C@@]3([H])C[C@H](O)[C@]12C</p>
            <p>inchikey: AWLXQJGPNLCTLM-YFXOTMPNSA-J</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__7257_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__Galactopyranose_c" id="M_L__45__Galactopyranose_c" name="L-galactopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@@H]1OC(O)[C@@H](O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: WQZGKKKJIJFFOK-DHVFOXMCSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__Galactopyranose_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
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        </annotation>
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      <species metaid="M_CPD__45__330_c" id="M_CPD__45__330_c" name="L-galactono-1,4-lactone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 178.14</p>
            <p>smiles: [H][C@@]1(OC(=O)[C@@H](O)[C@@H]1O)[C@@H](O)CO</p>
            <p>inchikey: SXZYCXMUPBBULW-NEEWWZBLSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__330_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
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      </species>
      <species metaid="M_3__45__oxo__45__cis__45__vaccenoyl__45__ACPs_c" id="M_3__45__oxo__45__cis__45__vaccenoyl__45__ACPs_c" name="an (11Z)-3-oxooctadec-11-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H31O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Palmitoleoyl__45__ACPs_c" id="M_Palmitoleoyl__45__ACPs_c" name="a palmitoleoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H29OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Pi_e" id="M_Pi_e" name="phosphate" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="HO4P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 95.9804</p>
            <p>smiles: OP([O-])([O-])=O</p>
            <p>inchikey: NBIIXXVUZAFLBC-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_Pi_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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      </species>
      <species metaid="M_2__45__KETO__45__6__45__AMINO__45__CAPROATE_c" id="M_2__45__KETO__45__6__45__AMINO__45__CAPROATE_c" name="6-amino-2-oxohexanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 145.1564</p>
            <p>smiles: [NH3+]CCCCC(=O)C([O-])=O</p>
            <p>inchikey: GWENQMVPLJAMAE-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_2__45__KETO__45__6__45__AMINO__45__CAPROATE_c">
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      </species>
      <species metaid="M_THIAMINE_e" id="M_THIAMINE_e" name="thiamine" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C12H17N4OS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 265.354</p>
            <p>smiles: Cc1c(CCO)sc[n+]1Cc1cnc(C)nc1N</p>
            <p>inchikey: JZRWCGZRTZMZEH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_THIAMINE_e">
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                </rdf:Bag>
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      <species metaid="M_THIAMINE_c" id="M_THIAMINE_c" name="thiamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C12H17N4OS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 265.354</p>
            <p>smiles: Cc1c(CCO)sc[n+]1Cc1cnc(C)nc1N</p>
            <p>inchikey: JZRWCGZRTZMZEH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      </species>
      <species metaid="M_WATER_e" id="M_WATER_e" name="H2O" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 18.0153</p>
            <p>smiles: [H]O[H]</p>
            <p>inchikey: XLYOFNOQVPJJNP-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_WATER_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O/h1H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_THF_c" id="M_THF_c" name="5,6,7,8-tetrahydrofolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C19H21N7O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 443.4144</p>
            <p>smiles: Nc1nc2NC[C@H](CNc3ccc(cc3)C(=O)N[C@@H](CCC([O-])=O)C([O-])=O)Nc2c(=O)[nH]1</p>
            <p>inchikey: MSTNYGQPCMXVAQ-RYUDHWBXSA-L</p>
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        </notes>
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            <rdf:Description rdf:about="#M_THF_c">
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C19H23N7O6/c20-19-25-15-14(17(30)26-19)23-11(8-22-15)7-21-10-3-1-9(2-4-10)16(29)24-12(18(31)32)5-6-13(27)28/h1-4,11-12,21,23H,5-8H2,(H,24,29)(H,27,28)(H,31,32)(H4,20,22,25,26,30)/p-2/t11-,12-/m0/s1"/>
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      </species>
      <species metaid="M_CPD__45__13575_c" id="M_CPD__45__13575_c" name="2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C7H7NO6PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 264.174</p>
            <p>smiles: CC1=N[C@H](S\C1=C/COP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: PQMCQNOVNFNPFJ-HYIMLASBSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__13575_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H10NO6PS/c1-4-5(2-3-14-15(11,12)13)16-6(8-4)7(9)10/h2,6H,3H2,1H3,(H,9,10)(H2,11,12,13)/p-3/b5-2-/t6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_RH__45__Group_c" id="M_RH__45__Group_c" name="an organic molecule" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_METHYLENE__45__THF_c" id="M_METHYLENE__45__THF_c" name="METHYLENE-THF" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C20H21N7O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 455.4251</p>
            <p>smiles: [H][C@@]12CN(CN1c1c(NC2)nc(N)[nH]c1=O)c1ccc(cc1)C(=O)N[C@@H](CCC([O-])=O)C([O-])=O</p>
            <p>inchikey: QYNUQALWYRSVHF-OLZOCXBDSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_METHYLENE__45__THF_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H23N7O6/c21-20-24-16-15(18(31)25-20)27-9-26(8-12(27)7-22-16)11-3-1-10(2-4-11)17(30)23-13(19(32)33)5-6-14(28)29/h1-4,12-13H,5-9H2,(H,23,30)(H,28,29)(H,32,33)(H4,21,22,24,25,31)/p-2/t12-,13+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Alcohols_c" id="M_Alcohols_c" name="an alcohol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="HOR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_ZN__43__2_c" id="M_ZN__43__2_c" name="ZN+2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Zn">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 65.408</p>
            <p>smiles: [Zn++]</p>
            <p>inchikey: PTFCDOFLOPIGGS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ZN__43__2_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Zn/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_SUPER__45__OXIDE_c" id="M_SUPER__45__OXIDE_c" name="superoxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 31.9993</p>
            <p>smiles: [O][O-]</p>
            <p>inchikey: OUUQCZGPVNCOIJ-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SUPER__45__OXIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/HO2/c1-2/h1H/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_AMINOMETHYLDIHYDROLIPOYL__45__GCVH_c" id="M_AMINOMETHYLDIHYDROLIPOYL__45__GCVH_c" name="a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CHITOBIOSE_c" id="M_CHITOBIOSE_c" name="CHITOBIOSE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H28N2O11">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 424.4003</p>
            <p>smiles: CC(=O)N[C@H]1C(O)O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2NC(C)=O)[C@@H]1O</p>
            <p>inchikey: CDOJPCSDOXYJJF-CBTAGEKQSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CHITOBIOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C16H28N2O11/c1-5(21)17-9-13(25)14(8(4-20)27-15(9)26)29-16-10(18-6(2)22)12(24)11(23)7(3-19)28-16/h7-16,19-20,23-26H,3-4H2,1-2H3,(H,17,21)(H,18,22)/t7-,8-,9-,10-,11-,12-,13-,14-,15?,16+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Chitodextrins_c" id="M_Chitodextrins_c" name="a chitodextrin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DIHYDROLIPOYL__45__GCVH_c" id="M_DIHYDROLIPOYL__45__GCVH_c" name="a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__13227_c" id="M_CPD__45__13227_c" name="CPD-13227" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="3" fbc:chemicalFormula="C18H38N3O13">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 504.505</p>
            <p>smiles: [NH3+][C@H]1C(O)O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3[NH3+])[C@H](O)[C@H]2[NH3+])[C@@H]1O</p>
            <p>inchikey: RQFQJYYMBWVMQG-NLJWRWSBSA-Q</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__13227_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C18H35N3O13/c19-7-12(27)14(5(2-23)30-16(7)29)33-18-9(21)13(28)15(6(3-24)32-18)34-17-8(20)11(26)10(25)4(1-22)31-17/h4-18,22-29H,1-3,19-21H2/p+3/t4-,5-,6-,7-,8-,9-,10-,11-,12-,13-,14-,15-,16?,17+,18+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ZN__43__2_e" id="M_ZN__43__2_e" name="ZN+2" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Zn">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 65.408</p>
            <p>smiles: [Zn++]</p>
            <p>inchikey: PTFCDOFLOPIGGS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ZN__43__2_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Zn/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MAL_c" id="M_MAL_c" name="(S)-malate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H4O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 132.0727</p>
            <p>smiles: O[C@@H](CC([O-])=O)C([O-])=O</p>
            <p>inchikey: BJEPYKJPYRNKOW-REOHCLBHSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MAL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H6O5/c5-2(4(8)9)1-3(6)7/h2,5H,1H2,(H,6,7)(H,8,9)/p-2/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_OXALACETIC_ACID_c" id="M_OXALACETIC_ACID_c" name="oxaloacetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H2O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 130.0568</p>
            <p>smiles: [O-]C(=O)CC(=O)C([O-])=O</p>
            <p>inchikey: KHPXUQMNIQBQEV-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OXALACETIC_ACID_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H4O5/c5-2(4(8)9)1-3(6)7/h1H2,(H,6,7)(H,8,9)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Oxidized__45__Plastocyanins_c" id="M_Oxidized__45__Plastocyanins_c" name="an oxidized plastocyanin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="CuR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__7993_c" id="M_CPD__45__7993_c" name="N-methylaminobutanal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H12NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 102.1543</p>
            <p>smiles: C[NH2+]CCCC=O</p>
            <p>inchikey: PJZBKCVVFPTFAW-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__7993_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H11NO/c1-6-4-2-3-5-7/h5-6H,2-4H2,1H3/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Plastocyanin__45__Reduced_c" id="M_Plastocyanin__45__Reduced_c" name="a reduced plastocyanin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="CuR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__196_c" id="M_CPD__45__196_c" name="octanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C29H46N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 889.701</p>
            <p>smiles: CCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: KQMZYOXOBSXMII-CECATXLMSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__196_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD0__45__2108_c" id="M_CPD0__45__2108_c" name="(2E)-oct-2-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C29H44N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 887.685</p>
            <p>smiles: CCCCC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: CPSDNAXXKWVYIY-NTLMCJQISA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD0__45__2108_c">
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BIOMASS_e" id="M_BIOMASS_e" name="BIOMASS" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__353_c" id="M_CPD__45__353_c" name="GDP-&amp;alpha;-D-rhamnose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 587.3269</p>
            <p>smiles: C[C@H]1O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c2nc(N)[nH]c3=O)[C@@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: LQEBEXMHBLQMDB-GDJBGNAASA-L</p>
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      <species metaid="M_CPD__45__13684_c" id="M_CPD__45__13684_c" name="cholest-5-en-3-one" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H44O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 384.6377</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])[C@]3([H])CC=C4CC(=O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CCCC(C)C</p>
            <p>inchikey: GGCLNOIGPMGLDB-GYKMGIIDSA-N</p>
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        <annotation>
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      <species metaid="M_MESO__45__DIAMINOPIMELATE_c" id="M_MESO__45__DIAMINOPIMELATE_c" name="meso-diaminopimelate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 190.1971</p>
            <p>smiles: [NH3+][C@@H](CCC[C@@H]([NH3+])C([O-])=O)C([O-])=O</p>
            <p>inchikey: GMKMEZVLHJARHF-SYDPRGILSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MESO__45__DIAMINOPIMELATE_c">
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      <species metaid="M_LL__45__DIAMINOPIMELATE_c" id="M_LL__45__DIAMINOPIMELATE_c" name="L,L-diaminopimelate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 190.1971</p>
            <p>smiles: [NH3+][C@@H](CCC[C@H]([NH3+])C([O-])=O)C([O-])=O</p>
            <p>inchikey: GMKMEZVLHJARHF-WHFBIAKZSA-N</p>
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        </notes>
        <annotation>
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      <species metaid="M_Aliphatic__45__Alpha__45__Omega__45__Diamines_c" id="M_Aliphatic__45__Alpha__45__Omega__45__Diamines_c" name="an aliphatic &amp;alpha;,&amp;omega;-diamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_Aliphatic__45__Omega__45__Amino__45__Aldehydes_c" id="M_Aliphatic__45__Omega__45__Amino__45__Aldehydes_c" name="Aliphatic-Omega-Amino-Aldehydes" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_T2__45__DECENOYL__45__COA_c" id="M_T2__45__DECENOYL__45__COA_c" name="(2E)-dec-2-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C31H48N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 915.738</p>
            <p>smiles: CCCCCCC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: MGNBGCRQQFMNBM-YJHHLLFWSA-J</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_T2__45__DECENOYL__45__COA_c">
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      <species metaid="M_T2__45__C4__45__DECADIENYL__45__COA_c" id="M_T2__45__C4__45__DECADIENYL__45__COA_c" name="trans-&amp;Delta;2, cis-&amp;Delta;4-decadienoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C31H46N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 913.722</p>
            <p>smiles: CCCCC\C=C/C=C/C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: FASAKYLWSRDQOH-IMVFQKDNSA-J</p>
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        </notes>
        <annotation>
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      <species metaid="M_DIHYDROLIPOAMIDE_c" id="M_DIHYDROLIPOAMIDE_c" name="dihydrolipoamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H17NOS2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 207.357</p>
            <p>smiles: NC(=O)CCCC[C@@H](S)CCS</p>
            <p>inchikey: VLYUGYAKYZETRF-SSDOTTSWSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIHYDROLIPOAMIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H17NOS2/c9-8(10)4-2-1-3-7(12)5-6-11/h7,11-12H,1-6H2,(H2,9,10)/t7-/m1/s1"/>
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      <species metaid="M_S__45__ACETYLDIHYDROLIPOAMIDE_c" id="M_S__45__ACETYLDIHYDROLIPOAMIDE_c" name="S-acetyldihydrolipoamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H19NO2S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 249.393</p>
            <p>smiles: CC(=O)SC(CCS)CCCCC(N)=O</p>
            <p>inchikey: ARGXEXVCHMNAQU-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_S__45__ACETYLDIHYDROLIPOAMIDE_c">
              <bqbiol:isVersionOf>
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      <species metaid="M_BILIRUBIN_c" id="M_BILIRUBIN_c" name="(Z,Z)-bilirubin-IX &amp;alpha;" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C33H34N4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 582.6474</p>
            <p>smiles: CC1=C(C=C)\C(NC1=O)=C\c1[nH]c(Cc2[nH]c(\C=C3/NC(=O)C(C=C)=C3C)c(C)c2CCC([O-])=O)c(CCC([O-])=O)c1C</p>
            <p>inchikey: BPYKTIZUTYGOLE-IFADSCNNSA-L</p>
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        <annotation>
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            <rdf:Description rdf:about="#M_BILIRUBIN_c">
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                </rdf:Bag>
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        </annotation>
      </species>
      <species metaid="M_BILIVERDINE_c" id="M_BILIVERDINE_c" name="(Z,Z)-biliverdin-IX &amp;alpha;" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C33H32N4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 580.6315</p>
            <p>smiles: CC1=C(C=C)\C(NC1=O)=C\c1[nH]c(\C=C2/N=C(/C=C3\NC(=O)C(C=C)=C3C)C(C)=C2CCC([O-])=O)c(CCC([O-])=O)c1C</p>
            <p>inchikey: QBUVFDKTZJNUPP-BBROENKCSA-L</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_BILIVERDINE_c">
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                </rdf:Bag>
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      <species metaid="M_Alpha__45__D__45__aldose__45__1__45__phosphates_c" id="M_Alpha__45__D__45__aldose__45__1__45__phosphates_c" name="an &amp;alpha;-D-aldose 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: [H]C1(O)C([H])(O)[C@@]([H])(CO)O[C@]([H])(OP([O-])([O-])=O)C1([H])O</p>
            <p>inchikey: HXXFSFRBOHSIMQ-ZOSDKUOISA-L</p>
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            <rdf:Description rdf:about="#M_Alpha__45__D__45__aldose__45__1__45__phosphates_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_AGMATHINE_c" id="M_AGMATHINE_c" name="agmatine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C5H16N4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 132.2062</p>
            <p>smiles: NC(=[NH2+])NCCCC[NH3+]</p>
            <p>inchikey: QYPPJABKJHAVHS-UHFFFAOYSA-P</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AGMATHINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H14N4/c6-3-1-2-4-9-5(7)8/h1-4,6H2,(H4,7,8,9)/p+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__597_c" id="M_CPD__45__597_c" name="N-carbamoylputrescine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H14N3O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 132.1836</p>
            <p>smiles: NC(=O)NCCCC[NH3+]</p>
            <p>inchikey: YANFYYGANIYHGI-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_P__45__RIBOSYL__45__4__45__SUCCCARB__45__AMINOIMIDAZOLE_c" id="M_P__45__RIBOSYL__45__4__45__SUCCCARB__45__AMINOIMIDAZOLE_c" name="5&apos;-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C13H15N4O12P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 450.2538</p>
            <p>smiles: [H][C@]1(COP([O-])([O-])=O)O[C@]([H])([C@H](O)[C@@H]1O)n1cnc(C(=O)N[C@@H](CC([O-])=O)C([O-])=O)c1N</p>
            <p>inchikey: NAQGHJTUZRHGAC-ZZZDFHIKSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_P__45__RIBOSYL__45__4__45__SUCCCARB__45__AMINOIMIDAZOLE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_AICAR_c" id="M_AICAR_c" name="5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H13N4O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 336.1964</p>
            <p>smiles: [H][C@]1(COP([O-])([O-])=O)O[C@]([H])([C@H](O)[C@@H]1O)n1cnc(C(N)=O)c1N</p>
            <p>inchikey: NOTGFIUVDGNKRI-UUOKFMHZSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_AICAR_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PHOSPHORIBOSYL__45__FORMAMIDO__45__CARBOXAMIDE_c" id="M_PHOSPHORIBOSYL__45__FORMAMIDO__45__CARBOXAMIDE_c" name="5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H13N4O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 364.2065</p>
            <p>smiles: [H]C(=O)Nc1c(ncn1[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O)C(N)=O</p>
            <p>inchikey: ABCOOORLYAOBOZ-KQYNXXCUSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_PHOSPHORIBOSYL__45__FORMAMIDO__45__CARBOXAMIDE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
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            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_L__45__1__45__GLYCEROPHOSPHORYLETHANOL__45__AMINE_c" id="M_L__45__1__45__GLYCEROPHOSPHORYLETHANOL__45__AMINE_c" name="sn-glycero-3-phosphoethanolamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H14NO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 215.1415</p>
            <p>smiles: [H][C@](O)(CO)COP([O-])(=O)OCC[NH3+]</p>
            <p>inchikey: JZNWSCPGTDBMEW-YFKPBYRVSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_L__45__1__45__GLYCEROPHOSPHORYLETHANOL__45__AMINE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__8291_c" id="M_CPD__45__8291_c" name="1-18:1-2-18:1-phosphatidylethanolamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H78NO8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 744.0337</p>
            <p>smiles: CCCCCCCC\C=C/CCCCCCCC(=O)OC[C@H](COP([O-])(=O)OCC[NH3+])OC(=O)CCCCCCC\C=C/CCCCCCCC</p>
            <p>inchikey: MWRBNPKJOOWZPW-NYVOMTAGSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_tRNA__45__pseudouridine__45__38__45__40_c" id="M_tRNA__45__pseudouridine__45__38__45__40_c" name="a pseudouridine38-40 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_L__45__1__45__LYSOPHOSPHATIDATE_c" id="M_L__45__1__45__LYSOPHOSPHATIDATE_c" name="1-oleoyl-sn-glycerol 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H39O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 434.505</p>
            <p>smiles: CCCCCCCC\C=C/CCCCCCCC(=O)OC[C@@H](O)COP([O-])([O-])=O</p>
            <p>inchikey: WRGQSWVCFNIUNZ-GDCKJWNLSA-L</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_L__45__1__45__LYSOPHOSPHATIDATE_c">
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        </annotation>
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      <species metaid="M_CPD__45__8268_c" id="M_CPD__45__8268_c" name="dioleoyl phosphatidate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C39H71O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 698.9511</p>
            <p>smiles: CCCCCCCC\C=C/CCCCCCCC(=O)OCC(COP([O-])([O-])=O)OC(=O)CCCCCCC\C=C/CCCCCCCC</p>
            <p>inchikey: MHUWZNTUIIFHAS-CLFAGFIQSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      </species>
      <species metaid="M_tRNA__45__uridine__45__38__45__40_c" id="M_tRNA__45__uridine__45__38__45__40_c" name="a uridine38-40 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__15924_c" id="M_CPD__45__15924_c" name="CPD-15924" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H37O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 432.4891</p>
            <p>smiles: CCCCCCCC\C=C/CCCCCCCC(=O)OCC(=O)COP([O-])([O-])=O</p>
            <p>inchikey: YZKFNNQAEBNCEN-KTKRTIGZSA-L</p>
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        <annotation>
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                </rdf:Bag>
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        </annotation>
      </species>
      <species metaid="M_TRP_c" id="M_TRP_c" name="L-tryptophan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12N2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 204.2252</p>
            <p>smiles: [NH3+][C@@H](Cc1c[nH]c2ccccc12)C([O-])=O</p>
            <p>inchikey: QIVBCDIJIAJPQS-VIFPVBQESA-N</p>
          </body>
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        <annotation>
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            <rdf:Description rdf:about="#M_TRP_c">
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                </rdf:Bag>
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        </annotation>
      </species>
      <species metaid="M_PALMITATE_c" id="M_PALMITATE_c" name="palmitate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C16H31O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 255.4167</p>
            <p>smiles: CCCCCCCCCCCCCCCC([O-])=O</p>
            <p>inchikey: IPCSVZSSVZVIGE-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_PALMITATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
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      </species>
      <species metaid="M_INDOLE__45__3__45__GLYCEROL__45__P_c" id="M_INDOLE__45__3__45__GLYCEROL__45__P_c" name="(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C11H12NO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 285.1909</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)[C@@H](O)c1c[nH]c2ccccc12</p>
            <p>inchikey: NQEQTYPJSIEPHW-MNOVXSKESA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_INDOLE__45__3__45__GLYCEROL__45__P_c">
              <bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_1__45__2__45__DIPALMITOYLPHOSPHATIDYLCHOLINE_c" id="M_1__45__2__45__DIPALMITOYLPHOSPHATIDYLCHOLINE_c" name="1,2-dipalmitoyl-sn-glycero-3-phosphocholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H80NO8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 734.0389</p>
            <p>smiles: CCCCCCCCCCCCCCCC(=O)OC[C@H](COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCCCCCCCC</p>
            <p>inchikey: KILNVBDSWZSGLL-KXQOOQHDSA-N</p>
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        </notes>
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            <rdf:Description rdf:about="#M_1__45__2__45__DIPALMITOYLPHOSPHATIDYLCHOLINE_c">
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        </annotation>
      </species>
      <species metaid="M_CPD__45__8343_c" id="M_CPD__45__8343_c" name="1-palmitoyl-sn-glycero-3-phosphocholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C24H50NO7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 495.6301</p>
            <p>smiles: CCCCCCCCCCCCCCCC(=O)OC[C@@H](O)COP([O-])(=O)OCC[N+](C)(C)C</p>
            <p>inchikey: ASWBNKHCZGQVJV-HSZRJFAPSA-N</p>
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      <species metaid="M_SPERMINE_c" id="M_SPERMINE_c" name="spermine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="4" fbc:chemicalFormula="C10H30N4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 206.3698</p>
            <p>smiles: [NH3+]CCC[NH2+]CCCC[NH2+]CCC[NH3+]</p>
            <p>inchikey: PFNFFQXMRSDOHW-UHFFFAOYSA-R</p>
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        </notes>
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      <species metaid="M_SPERMIDINE_c" id="M_SPERMIDINE_c" name="spermidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="3" fbc:chemicalFormula="C7H22N3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 148.268</p>
            <p>smiles: [NH3+]CCCC[NH2+]CCC[NH3+]</p>
            <p>inchikey: ATHGHQPFGPMSJY-UHFFFAOYSA-Q</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_SPERMIDINE_c">
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      <species metaid="M_CPD__45__6082_c" id="M_CPD__45__6082_c" name="3-aminopropanal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H8NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 74.1012</p>
            <p>smiles: [H]C(=O)CC[NH3+]</p>
            <p>inchikey: PCXDJQZLDDHMGX-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_CPD1F__45__2_c" id="M_CPD1F__45__2_c" name="(-)-methyl jasmonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H20O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 224.2961</p>
            <p>smiles: CC\C=C/C[C@@H]1[C@@H](CC(=O)OC)CCC1=O</p>
            <p>inchikey: GEWDNTWNSAZUDX-WQMVXFAESA-N</p>
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        </notes>
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      <species metaid="M_CARBOXYMETHYL__45__HYDROXYPHENYLPROPCOA_c" id="M_CARBOXYMETHYL__45__HYDROXYPHENYLPROPCOA_c" name="CARBOXYMETHYL-HYDROXYPHENYLPROPCOA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C32H41N7O20P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 968.692</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C(CC([O-])=O)[C@H](O)c1ccccc1</p>
            <p>inchikey: DVSQFPLMOLPRDU-ACXVELPGSA-I</p>
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        </notes>
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      <species metaid="M_CELLOBIOSE_c" id="M_CELLOBIOSE_c" name="&amp;beta;-D-cellobiose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 342.2965</p>
            <p>smiles: OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)[C@H](O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@@H]1O</p>
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      <species metaid="M_E__45__PHENYLITACONYL__45__COA_c" id="M_E__45__PHENYLITACONYL__45__COA_c" name="E-PHENYLITACONYL-COA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C32H39N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 950.677</p>
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      <species metaid="M_SEROTONIN_c" id="M_SEROTONIN_c" name="serotonin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C10H13N2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 177.2225</p>
            <p>smiles: [NH3+]CCc1c[nH]c2ccc(O)cc12</p>
            <p>inchikey: QZAYGJVTTNCVMB-UHFFFAOYSA-O</p>
          </body>
        </notes>
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      <species metaid="M_CPD0__45__1027_c" id="M_CPD0__45__1027_c" name="a debranched &amp;alpha;-limit dextrin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_3__45__5__45__ADP_c" id="M_3__45__5__45__ADP_c" name="adenosine 3&apos;,5&apos;-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H11N5O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 423.1716</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](OP([O-])([O-])=O)[C@H]1O</p>
            <p>inchikey: WHTCPDAXWFLDIH-KQYNXXCUSA-J</p>
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      </species>
      <species metaid="M_CPD__45__11665_c" id="M_CPD__45__11665_c" name="serotonin O-sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N2O4S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 256.278</p>
            <p>smiles: [NH3+]CCc1c[nH]c2ccc(OS([O-])(=O)=O)cc12</p>
            <p>inchikey: JFWYSGGSCOOBGK-UHFFFAOYSA-N</p>
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      <species metaid="M_5__45__HYDROXYINDOLE_ACETALDEHYDE_c" id="M_5__45__HYDROXYINDOLE_ACETALDEHYDE_c" name="5-hydroxyindole acetaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H9NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 175.184</p>
            <p>smiles: Oc1ccc2[nH]cc(CC=O)c2c1</p>
            <p>inchikey: OBFAPCIUSYHFIE-UHFFFAOYSA-N</p>
          </body>
        </notes>
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      <species metaid="M_BENZOYLSUCCINYL__45__COA_c" id="M_BENZOYLSUCCINYL__45__COA_c" name="BENZOYLSUCCINYL-COA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C32H39N7O20P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 966.676</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C(CC([O-])=O)C(=O)c1ccccc1</p>
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      <species metaid="M_CPD__45__674_c" id="M_CPD__45__674_c" name="trans-cinnamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H7O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 147.1512</p>
            <p>smiles: [O-]C(=O)\C=C\c1ccccc1</p>
            <p>inchikey: WBYWAXJHAXSJNI-VOTSOKGWSA-M</p>
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      <species metaid="M_CINNAMOYL__45__COA_c" id="M_CINNAMOYL__45__COA_c" name="(E)-cinnamoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C30H38N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 893.648</p>
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      <species metaid="M_ACYL__45__ACP_c" id="M_ACYL__45__ACP_c" name="an acyl-[acyl-carrier protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_B__45__KETOACYL__45__ACP_c" id="M_B__45__KETOACYL__45__ACP_c" name="a 3-oxoacyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_BENZOYLCOA_c" id="M_BENZOYLCOA_c" name="benzoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C28H36N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 867.611</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)c1ccccc1</p>
            <p>inchikey: VEVJTUNLALKRNO-TYHXJLICSA-J</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_BENZOYLCOA_c">
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      <species metaid="M_1__45__Alkyl__45__sn__45__glycero__45__3__45__phosphocholines_c" id="M_1__45__Alkyl__45__sn__45__glycero__45__3__45__phosphocholines_c" name="a 1-alkyl-2-lyso-sn-glycero-3-phosphocholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H19NO6PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[N+](C)(C)CCOP([O-])(=O)OC[C@H](O)CO[*]</p>
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        </notes>
      </species>
      <species metaid="M_Alkyl__45__acetyl__45__glycero__45__phosphocholines_c" id="M_Alkyl__45__acetyl__45__glycero__45__phosphocholines_c" name="a 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H21NO7PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)O[C@H](CO[*])COP([O-])(=O)OCC[N+](C)(C)C</p>
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        </notes>
      </species>
      <species metaid="M_CPD__45__514_c" id="M_CPD__45__514_c" name="3-oxo-3-phenylpropanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C30H38N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 909.647</p>
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      <species metaid="M_FERROCYTOCHROME__45__B5_c" id="M_FERROCYTOCHROME__45__B5_c" name="a ferrocytochrome b5" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Protein__45__L__45__glutamine_c" id="M_Protein__45__L__45__glutamine_c" name="a [protein]-L-glutamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_Protein__45__N6__45__5__45__glutamyl__45__lysine__45__crosslinks_c" id="M_Protein__45__N6__45__5__45__glutamyl__45__lysine__45__crosslinks_c" name="a protein with an N6-(&amp;gamma;-glutamyl)-L-lysine crosslink" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_CPD__45__23708_c" id="M_CPD__45__23708_c" name="(3&amp;beta;,9&amp;beta;)-4&amp;alpha;-demethyl-4&amp;alpha;-carboxy-9,19-cyclolanost-24-en-3-ol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Poly__45__Gamma__45__Glutamylcysteine__45__Glycines_c" id="M_Poly__45__Gamma__45__Glutamylcysteine__45__Glycines_c" name="a phytochelatin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_2C__45__METH__45__D__45__ERYTHRITOL__45__CYCLODIPHOSPHATE_c" id="M_2C__45__METH__45__D__45__ERYTHRITOL__45__CYCLODIPHOSPHATE_c" name="2-C-methyl-D-erythritol-2,4-cyclodiphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H10O9P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 276.0761</p>
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            <p>inchikey: SFRQRNJMIIUYDI-UHNVWZDZSA-L</p>
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      <species metaid="M_Mannosyl5__45__N__45__Glycans_c" id="M_Mannosyl5__45__N__45__Glycans_c" name="Man5GlcNAc2-[protein] (isomer 5A1,2)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C50H82N4O38R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO[C@H]4O[C@H](CO[C@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]5O)[C@@H](O)[C@H](O[C@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]5O)[C@@H]4O)[C@@H](O)[C@H](O[C@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]4O)[C@@H]3O)[C@H](O)[C@H]2NC(C)=O)[C@@H](CO)O[C@H]1NC(=O)C[C@H](N*)C(=O)O*</p>
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      <species metaid="M_CPD__45__23709_c" id="M_CPD__45__23709_c" name="31-norcycloartenone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_CPD__45__4211_c" id="M_CPD__45__4211_c" name="prenyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C5H9O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 243.0699</p>
            <p>smiles: CC(C)=CCOP([O-])(=O)OP([O-])([O-])=O</p>
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      <species metaid="M_Mannosyl5__45__N__45__acetyl__45__glucosamine2__45__R_c" id="M_Mannosyl5__45__N__45__acetyl__45__glucosamine2__45__R_c" name="Man5GlcNAc3-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_HYDROXY__45__METHYL__45__BUTENYL__45__DIP_c" id="M_HYDROXY__45__METHYL__45__BUTENYL__45__DIP_c" name="(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C5H9O8P2">
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            <p>mass: 259.0693</p>
            <p>smiles: C\C(CO)=C/COP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: MDSIZRKJVDMQOQ-GORDUTHDSA-K</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 412.6908</p>
            <p>smiles: [H][C@@]1(CC[C@@]2(C)[C@]3([H])CC[C@@]4([H])[C@H](C)[C@@H](O)CCC44CC34CC[C@]12C)[C@H](C)CCC=C(C)C</p>
            <p>inchikey: XZEUYTKSAYNYPK-YETBRXCGSA-N</p>
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      <species metaid="M_GDP__45__4__45__DEHYDRO__45__6__45__DEOXY__45__D__45__MANNOSE_c" id="M_GDP__45__4__45__DEHYDRO__45__6__45__DEOXY__45__D__45__MANNOSE_c" name="GDP-4-dehydro-&amp;alpha;-D-rhamnose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H21N5O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 585.3111</p>
            <p>smiles: C[C@H]1O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c2nc(N)[nH]c3=O)[C@@H](O)[C@@H](O)C1=O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 587.3269</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Reduced__45__hemoproteins_c" id="M_Reduced__45__hemoproteins_c" name="a reduced hemoprotein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__1828_c" id="M_CPD__45__1828_c" name="GDP-&amp;alpha;-D-mannuronate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C16H20N5O17P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 616.3025</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 378.3798</p>
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            <p>inchikey: SGSVWAYHEWEQET-SCRDCRAPSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 375.3565</p>
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            <p>inchikey: AUNGANRZJHBGPY-SCRDCRAPSA-M</p>
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      <species metaid="M_CHOLESTEROL_c" id="M_CHOLESTEROL_c" name="cholesterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H46O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 386.6535</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1176.109</p>
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        <notes>
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            <p>mass: 1174.093</p>
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        <notes>
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            <p>mass: 1089.977</p>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__13699_c" id="M_CPD__45__13699_c" name="3,22-dioxochol-4-en-24-oyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H64N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1132.014</p>
            <p>smiles: [H][C@@](C)(C(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@]1([H])CC[C@@]2([H])[C@]3([H])CCC4=CC(=O)CC[C@]4(C)[C@@]3([H])CC[C@]12C</p>
            <p>inchikey: MUOUYOUSQGFFIP-GDRSPGQTSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_SELENATE_c" id="M_SELENATE_c" name="selenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="O4Se">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 142.96</p>
            <p>smiles: [O-][Se]([O-])(=O)=O</p>
            <p>inchikey: QYHFIVBSNOWOCQ-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SELENATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O4Se/c1-5(2,3)4/h(H2,1,2,3,4)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__13713_c" id="M_CPD__45__13713_c" name="adenosine 5&apos;-phosphoselenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O10PSe">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 472.16</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)O[Se]([O-])(=O)=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XCADVMZZFPIERR-KQYNXXCUSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__678_c" id="M_CPD__45__678_c" name="hydrogen selenide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="HSe">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 79.97</p>
            <p>smiles: [Se-][H]</p>
            <p>inchikey: SPVXKVOXSXTJOY-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__678_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2Se/h1H2/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__SELENOCYSTEINE_c" id="M_L__45__SELENOCYSTEINE_c" name="L-selenocysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2Se">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 168.05</p>
            <p>smiles: [NH3+][C@@H](C[SeH])C([O-])=O</p>
            <p>inchikey: ZKZBPNGNEQAJSX-REOHCLBHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__SELENOCYSTEINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO2Se/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_biotin__45__L__45__lysine__45__in__45__BCCP__45__dimers_c" id="M_biotin__45__L__45__lysine__45__in__45__BCCP__45__dimers_c" name="a [biotin carboxyl-carrier-protein dimer]-N6-biotinyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_carboxybiotin__45__L__45__lysine__45__in__45__BCCP__45__dimers_c" id="M_carboxybiotin__45__L__45__lysine__45__in__45__BCCP__45__dimers_c" name="a [carboxyl-carrier protein dimer]-N6-carboxybiotinyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_BCCP__45__L__45__lysine_c" id="M_BCCP__45__L__45__lysine_c" name="a [biotin carboxyl-carrier protein]-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_BCCP__45__biotin__45__L__45__lysine_c" id="M_BCCP__45__biotin__45__L__45__lysine_c" name="a [biotin carboxyl-carrier protein]-N6-biotinyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_L__45__ASPARTATE__45__SEMIALDEHYDE_c" id="M_L__45__ASPARTATE__45__SEMIALDEHYDE_c" name="L-aspartate 4-semialdehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 117.1033</p>
            <p>smiles: [H]C(=O)C[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: HOSWPDPVFBCLSY-VKHMYHEASA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__ASPARTATE__45__SEMIALDEHYDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H7NO3/c5-3(1-2-6)4(7)8/h2-3H,1,5H2,(H,7,8)/t3-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__14443_c" id="M_CPD__45__14443_c" name="(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H7NO5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 185.1353</p>
            <p>smiles: O[C@H]1C[C@H](N=C(C1)C([O-])=O)C([O-])=O</p>
            <p>inchikey: DVTPRYHENFBCII-IMJSIDKUSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H9NO5/c9-3-1-4(6(10)11)8-5(2-3)7(12)13/h3-4,9H,1-2H2,(H,10,11)(H,12,13)/p-2/t3-,4-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIHYDROFOLATE__45__GLU__45__N_c" id="M_DIHYDROFOLATE__45__GLU__45__N_c" name="a 7,8-dihydrofolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C19H19N7O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 441.3986</p>
            <p>smiles: Nc1nc2NCC(CNc3ccc(cc3)C(=O)N[C@@H](CCC([O-])=O)C([O-])=O)=Nc2c(=O)[nH]1</p>
            <p>inchikey: OZRNSSUDZOLUSN-LBPRGKRZSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIHYDROFOLATE__45__GLU__45__N_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIHYDROFOLATE_c" id="M_DIHYDROFOLATE_c" name="7,8-dihydrofolate monoglutamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C19H19N7O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 441.3986</p>
            <p>smiles: Nc1nc2NCC(CNc3ccc(cc3)C(=O)N[C@@H](CCC([O-])=O)C([O-])=O)=Nc2c(=O)[nH]1</p>
            <p>inchikey: OZRNSSUDZOLUSN-LBPRGKRZSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIHYDROFOLATE_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C19H21N7O6/c20-19-25-15-14(17(30)26-19)23-11(8-22-15)7-21-10-3-1-9(2-4-10)16(29)24-12(18(31)32)5-6-13(27)28/h1-4,12,21H,5-8H2,(H,24,29)(H,27,28)(H,31,32)(H4,20,22,25,26,30)/p-2/t12-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PHOSPHORIBOSYL__45__CARBOXY__45__AMINOIMIDAZOLE_c" id="M_PHOSPHORIBOSYL__45__CARBOXY__45__AMINOIMIDAZOLE_c" name="5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 337.1811</p>
            <p>smiles: Nc1c([nH+]cn1[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O)C([O-])=O</p>
            <p>inchikey: XFVULMDJZXYMSG-ZIYNGMLESA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PHOSPHORIBOSYL__45__CARBOXY__45__AMINOIMIDAZOLE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H14N3O9P/c10-7-4(9(15)16)11-2-12(7)8-6(14)5(13)3(21-8)1-20-22(17,18)19/h2-3,5-6,8,13-14H,1,10H2,(H,15,16)(H2,17,18,19)/p-2/t3-,5-,6-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__PHOSPHORIBOSYL__45__5__45__AMINOIMIDAZOLE_c" id="M_5__45__PHOSPHORIBOSYL__45__5__45__AMINOIMIDAZOLE_c" name="5-amino-1-(5-phospho-&amp;beta;-D-ribosyl)imidazole" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H13N3O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 294.179</p>
            <p>smiles: [H][C@]1(COP([O-])([O-])=O)O[C@@]([H])(n2c[nH+]cc2N)[C@]([H])(O)[C@]1([H])O</p>
            <p>inchikey: PDACUKOKVHBVHJ-XVFCMESISA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__PHOSPHORIBOSYL__45__5__45__AMINOIMIDAZOLE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H14N3O7P/c9-5-1-10-3-11(5)8-7(13)6(12)4(18-8)2-17-19(14,15)16/h1,3-4,6-8,12-13H,2,9H2,(H2,14,15,16)/p-1/t4-,6-,7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__PHOSPHORIBOSYL__45__N__45__FORMYLGLYCINEAMIDINE_c" id="M_5__45__PHOSPHORIBOSYL__45__N__45__FORMYLGLYCINEAMIDINE_c" name="2-(formamido)-N1-(5-phospho-&amp;beta;-D-ribosyl)acetamidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H15N3O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 312.1943</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@H](NC(=[NH2+])CNC=O)O[C@@H]1COP([O-])([O-])=O</p>
            <p>inchikey: PMCOGCVKOAOZQM-XVFCMESISA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_5__45__PHOSPHORIBOSYL__45__N__45__FORMYLGLYCINEAMIDINE_c">
              <bqbiol:isVersionOf>
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            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_GLYOX_c" id="M_GLYOX_c" name="glyoxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2HO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 73.0281</p>
            <p>smiles: [H]C(=O)C([O-])=O</p>
            <p>inchikey: HHLFWLYXYJOTON-UHFFFAOYSA-M</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_GLYOX_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H2O3/c3-1-2(4)5/h1H,(H,4,5)/p-1"/>
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              </bqbiol:isVersionOf>
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      <species metaid="M_ALA__45__tRNAs_c" id="M_ALA__45__tRNAs_c" name="a tRNAAla" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Charged__45__ALA__45__tRNAs_c" id="M_Charged__45__ALA__45__tRNAs_c" name="an L-alanyl-[tRNAAla]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PALMITYL__45__COA_c" id="M_PALMITYL__45__COA_c" name="palmitoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H62N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1001.913</p>
            <p>smiles: CCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: MNBKLUUYKPBKDU-BBECNAHFSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        </annotation>
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      <species metaid="M_D__45__Glucosyl__45__12__45__diacyl__45__glycerols_c" id="M_D__45__Glucosyl__45__12__45__diacyl__45__glycerols_c" name="a 1,2-diacyl-3-O-(&amp;beta;-D-glucopyranosyl)-sn-glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H16O10R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H](OC[C@@H](COC([*])=O)OC([*])=O)[C@H](O)[C@@H](O)[C@@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_diacyl__45__3__45__O__45__glucl__45__1__45__6__45__gluc__45__sn__45__glycerol_c" id="M_diacyl__45__3__45__O__45__glucl__45__1__45__6__45__gluc__45__sn__45__glycerol_c" name="a 1,2-diacyl-3-O-(&amp;beta;-D-glucopyranosyl-(1-&gt;6)-O-&amp;beta;-D-glucopyranosyl)-sn-glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H26O15R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H](OC[C@H]2O[C@@H](OC[C@@H](COC([*])=O)OC([*])=O)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@@H](O)[C@@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__15056_c" id="M_CPD__45__15056_c" name="(2Z)-2-aminobut-2-enoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 101.1039</p>
            <p>smiles: [H]C(C)=C([NH3+])C([O-])=O</p>
            <p>inchikey: PAWSVPVNIXFKOS-IHWYPQMZSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15056_c">
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                </rdf:Bag>
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      <species metaid="M_CPD__45__16013_c" id="M_CPD__45__16013_c" name="2-iminobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 101.1039</p>
            <p>smiles: CCC(=[NH2+])C([O-])=O</p>
            <p>inchikey: WRBRCYPPGUCRHW-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_Charged__45__TRP__45__tRNAs_c" id="M_Charged__45__TRP__45__tRNAs_c" name="an L-tryptophanyl-[tRNATrp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__9699_c" id="M_CPD__45__9699_c" name="hypoglycin A" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H11NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 141.1677</p>
            <p>smiles: [H]C1(C[C@H]([NH3+])C([O-])=O)CC1=C</p>
            <p>inchikey: OOJZCXFXPZGUBJ-GDVGLLTNSA-N</p>
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        </notes>
        <annotation>
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      <species metaid="M_CPD__45__9700_c" id="M_CPD__45__9700_c" name="hypoglycin B" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H17N2O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 269.2743</p>
            <p>smiles: [H]C1(C[C@H](NC(=O)CC[C@H]([NH3+])C([O-])=O)C([O-])=O)CC1=C</p>
            <p>inchikey: UYDZYCPIQSRXKU-NPPUSCPJSA-M</p>
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        <annotation>
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      <species metaid="M_CYS__45__GLY_c" id="M_CYS__45__GLY_c" name="L-cysteinylglycine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 178.21</p>
            <p>smiles: [NH3+][C@@H](CS)C(=O)NCC([O-])=O</p>
            <p>inchikey: ZUKPVRWZDMRIEO-VKHMYHEASA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CYS__45__GLY_c">
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      <species metaid="M_TRP__45__tRNAs_c" id="M_TRP__45__tRNAs_c" name="a tRNATrp" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ALL__45__TRANS__45__HEPTAPRENYL__45__DIPHOSPHATE_c" id="M_ALL__45__TRANS__45__HEPTAPRENYL__45__DIPHOSPHATE_c" name="all-trans-heptaprenyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C35H57O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 651.772</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\COP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: LSJLEXWXRKTZAJ-YUIIPXGZSA-K</p>
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      <species metaid="M_CPD__45__9852_c" id="M_CPD__45__9852_c" name="3-heptaprenyl-4-hydroxybenzoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C42H61O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 613.9325</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\Cc1cc(ccc1O)C([O-])=O</p>
            <p>inchikey: PEMFGDIFKKXFRG-PYHSYOTJSA-M</p>
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        <annotation>
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      <species metaid="M_CPD__45__9610_c" id="M_CPD__45__9610_c" name="all-trans-decaprenyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C50H81O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 856.1231</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\COP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: FSCYHDCTHRVSKN-CMVHWAPMSA-K</p>
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      </species>
      <species metaid="M_CPD__45__9864_c" id="M_CPD__45__9864_c" name="3-decaprenyl-4-hydroxybenzoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C57H85O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 818.2835</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\Cc1cc(ccc1O)C([O-])=O</p>
            <p>inchikey: CMPNJZREBHCPHN-LTNIBBDRSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__9864_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C57H86O3/c1-44(2)21-12-22-45(3)23-13-24-46(4)25-14-26-47(5)27-15-28-48(6)29-16-30-49(7)31-17-32-50(8)33-18-34-51(9)35-19-36-52(10)37-20-38-53(11)39-40-54-43-55(57(59)60)41-42-56(54)58/h21,23,25,27,29,31,33,35,37,39,41-43,58H,12-20,22,24,26,28,30,32,34,36,38,40H2,1-11H3,(H,59,60)/p-1/b45-23+,46-25+,47-27+,48-29+,49-31+,50-33+,51-35+,52-37+,53-39+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Protein__45__L__45__serine__45__or__45__L__45__threonine_c" id="M_Protein__45__L__45__serine__45__or__45__L__45__threonine_c" name="a [protein] Ser/Thr" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H5NO2R3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC([*])[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Protein__45__Ser__45__or__45__Thr__45__phosphate_c" id="M_Protein__45__Ser__45__or__45__Thr__45__phosphate_c" name="a [protein] (L-serine/L-threonine) phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H4NO5PR3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]P([O-])(=O)OC([*])[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CANAVANINOSUCCINATE_c" id="M_CANAVANINOSUCCINATE_c" name="canavaninosuccinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H15N4O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 291.2385</p>
            <p>smiles: [NH3+]C(CCONC(=[NH2+])NC(CC([O-])=O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: SGYMGUGIGTWWLU-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CANAVANINOSUCCINATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H16N4O7/c10-4(7(16)17)1-2-20-13-9(11)12-5(8(18)19)3-6(14)15/h4-5H,1-3,10H2,(H,14,15)(H,16,17)(H,18,19)(H3,11,12,13)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CANAVANINE_c" id="M_CANAVANINE_c" name="L-canavanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H13N4O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 177.1812</p>
            <p>smiles: NC(=[NH2+])NOCC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: FSBIGDSBMBYOPN-VKHMYHEASA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CANAVANINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H12N4O3/c6-3(4(10)11)1-2-12-9-5(7)8/h3H,1-2,6H2,(H,10,11)(H4,7,8,9)/p+1/t3-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NICOTINAMIDE_NUCLEOTIDE_c" id="M_NICOTINAMIDE_NUCLEOTIDE_c" name="&amp;beta;-nicotinamide D-ribonucleotide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H14N2O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 333.2118</p>
            <p>smiles: NC(=O)c1ccc[n+](c1)[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: DAYLJWODMCOQEW-TURQNECASA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NICOTINAMIDE_NUCLEOTIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C11H15N2O8P/c12-10(16)6-2-1-3-13(4-6)11-9(15)8(14)7(21-11)5-20-22(17,18)19/h1-4,7-9,11,14-15H,5H2,(H3-,12,16,17,18,19)/p-1/t7-,8-,9-,11-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__24185_c" id="M_CPD__45__24185_c" name="CPD-24185" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_CPD__45__22095_c" id="M_CPD__45__22095_c" name="fucosterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_CPD__45__24184_c" id="M_CPD__45__24184_c" name="CPD-24184" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_3__45__METHYLSULFINYLPROPYL__45__GLUCOSINOLATE_c" id="M_3__45__METHYLSULFINYLPROPYL__45__GLUCOSINOLATE_c" name="glucoiberin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H20NO10S3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 422.473</p>
            <p>smiles: CS(=O)CCCC(S[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)=NOS([O-])(=O)=O</p>
            <p>inchikey: PHYYADMVYQURSX-WWFIZPDBSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__METHYLSULFINYLPROPYL__45__GLUCOSINOLATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C11H21NO10S3/c1-24(17)4-2-3-7(12-22-25(18,19)20)23-11-10(16)9(15)8(14)6(5-13)21-11/h6,8-11,13-16H,2-5H2,1H3,(H,18,19,20)/p-1/b12-7+/t6-,8-,9+,10-,11+,24?/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__METHYLTHIOPROPYL__45__GLUCOSINOLATE_c" id="M_3__45__METHYLTHIOPROPYL__45__GLUCOSINOLATE_c" name="glucoiberverin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H20NO9S3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 406.473</p>
            <p>smiles: CSCCC\C(S[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)=N\OS([O-])(=O)=O</p>
            <p>inchikey: ZCZCVJVUJGULMO-IIPHORNXSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__METHYLTHIOPROPYL__45__GLUCOSINOLATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C11H21NO9S3/c1-22-4-2-3-7(12-21-24(17,18)19)23-11-10(16)9(15)8(14)6(5-13)20-11/h6,8-11,13-16H,2-5H2,1H3,(H,17,18,19)/p-1/b12-7-/t6-,8-,9+,10-,11+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__1__45__P_c" id="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__1__45__P_c" name="N-acetyl-&amp;alpha;-D-glucosamine 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C8H14NO9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 299.1729</p>
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1OP([O-])([O-])=O</p>
            <p>inchikey: FZLJPEPAYPUMMR-FMDGEEDCSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__1__45__P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H16NO9P/c1-3(11)9-5-7(13)6(12)4(2-10)17-8(5)18-19(14,15)16/h4-8,10,12-13H,2H2,1H3,(H,9,11)(H2,14,15,16)/p-2/t4-,5-,6-,7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MANNITOL__45__1P_c" id="M_MANNITOL__45__1P_c" name="D-mannitol 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H13O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 260.1369</p>
            <p>smiles: OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)COP([O-])([O-])=O</p>
            <p>inchikey: GACTWZZMVMUKNG-KVTDHHQDSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MANNITOL__45__1P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H15O9P/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14/h3-11H,1-2H2,(H2,12,13,14)/p-2/t3-,4-,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MANNITOL_c" id="M_MANNITOL_c" name="D-mannitol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 182.1718</p>
            <p>smiles: OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO</p>
            <p>inchikey: FBPFZTCFMRRESA-KVTDHHQDSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MANNITOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4-,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__HYDROXYADIPYL__45__COA_c" id="M_3__45__HYDROXYADIPYL__45__COA_c" name="(3S)-hydroxyadipyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C27H39N7O20P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 906.622</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C[C@@H](O)CCC([O-])=O</p>
            <p>inchikey: OTEACGAEDCIMBS-NOTSHUFBSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__HYDROXYADIPYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_XANTHINE_c" id="M_XANTHINE_c" name="xanthine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 152.1109</p>
            <p>smiles: O=c1[nH]c2[nH]cnc2c(=O)[nH]1</p>
            <p>inchikey: LRFVTYWOQMYALW-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_XANTHINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H4N4O2/c10-4-2-3(7-1-6-2)8-5(11)9-4/h1H,(H3,6,7,8,9,10,11)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_URATE_c" id="M_URATE_c" name="urate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 168.1103</p>
            <p>smiles: O=c1[nH]c2[nH]c(=O)[nH]c(=O)c2[nH]1</p>
            <p>inchikey: LEHOTFFKMJEONL-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_URATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H4N4O3/c10-3-1-2(7-4(11)6-1)8-5(12)9-3/h(H4,6,7,8,9,10,11,12)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Octanoylated__45__domains_c" id="M_Octanoylated__45__domains_c" name="a [lipoyl-carrier protein] N6-octanoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Lipoyl__45__Protein__45__L__45__Lysine_c" id="M_Lipoyl__45__Protein__45__L__45__Lysine_c" name="a [lipoyl-carrier protein]-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C6H14N2OR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]CCCC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Dihydro__45__Lipoyl__45__Proteins_c" id="M_Dihydro__45__Lipoyl__45__Proteins_c" name="a [lipoyl-carrier protein] N6-[(R)-dihydrolipoyl]-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__7046_c" id="M_CPD__45__7046_c" name="sulfide(2-)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="HS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 33.073</p>
            <p>smiles: [S-][H]</p>
            <p>inchikey: RWSOTUBLDIXVET-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__7046_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2S/h1H2/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Iron__45__Sulfur__45__Cluster__45__Scaffold__45__Proteins_c" id="M_Iron__45__Sulfur__45__Cluster__45__Scaffold__45__Proteins_c" name="an [Fe-S] cluster scaffold protein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Fe4S4__45__Cluster__45__Protein_c" id="M_Fe4S4__45__Cluster__45__Protein_c" name="an [Fe-S] cluster scaffold protein carrying a [4Fe-4S]+2 cluster" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_CPD__45__11671_c" id="M_CPD__45__11671_c" name="5-hydroxytryptophol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 177.1998</p>
            <p>smiles: OCCc1c[nH]c2ccc(O)cc12</p>
            <p>inchikey: KQROHCSYOGBQGJ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__11671_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H11NO2/c12-4-3-7-6-11-10-2-1-8(13)5-9(7)10/h1-2,5-6,11-13H,3-4H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__11674_c" id="M_CPD__45__11674_c" name="5-hydroxytryptophol sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H10NO5S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 257</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__11674_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H11NO5S/c12-4-3-7-6-11-10-2-1-8(5-9(7)10)16-17(13,14)15/h1-2,5-6,11-12H,3-4H2,(H,13,14,15)/CRV:17.6"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__166_c" id="M_CPD__45__166_c" name="a dolichyl &amp;beta;-D-glucosyl phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__18076_c" id="M_CPD__45__18076_c" name="&amp;alpha;-D-Glc-(1&amp;rarr;2)-&amp;alpha;-D-Glc-(1&amp;rarr;3)-&amp;alpha;-D-Glc-(1&amp;rarr;3)-&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;3)-[&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;3)-[&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;6)]-&amp;alpha;-D-Man-(1&amp;rarr;6)]-&amp;beta;-D-Man-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;4)-&amp;alpha;-D-GlcNAc-diphosphodolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__11673_c" id="M_CPD__45__11673_c" name="5-hydroxytryptophol glucuronide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C16H18NO8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 352.3166</p>
            <p>smiles: OCCc1c[nH]c2ccc(OC3OC(C(O)C(O)C3O)C([O-])=O)cc12</p>
            <p>inchikey: NFLHLWRXDOXSCF-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__11673_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C16H19NO8/c18-4-3-7-6-17-10-2-1-8(5-9(7)10)24-16-13(21)11(19)12(20)14(25-16)15(22)23/h1-2,5-6,11-14,16-21H,3-4H2,(H,22,23)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__224_c" id="M_CPD__45__224_c" name="a dolichyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_GUANOSINE__45__5DP__45__3DP_c" id="M_GUANOSINE__45__5DP__45__3DP_c" name="ppGpp" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C10H12N5O17P4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 598.1234</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP(O)([O-])=O)[C@@H](OP([O-])(=O)OP([O-])([O-])=O)[C@H]1O</p>
            <p>inchikey: BUFLLCUFNHESEH-UUOKFMHZSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GUANOSINE__45__5DP__45__3DP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H17N5O17P4/c11-10-13-7-4(8(17)14-10)12-2-15(7)9-5(16)6(30-36(26,27)32-34(21,22)23)3(29-9)1-28-35(24,25)31-33(18,19)20/h2-3,5-6,9,16H,1H2,(H,24,25)(H,26,27)(H2,18,19,20)(H2,21,22,23)(H3,11,13,14,17)/p-5/t3-,5-,6-,9-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NN__45__DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO_c" id="M_NN__45__DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO_c" name="N-acetyl-&amp;beta;-D-glucosaminyl-(1&amp;rarr;4)-N-acetyl-&amp;alpha;-D-glucosaminyl-diphosphodolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C96H158N2O17P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1674.2335</p>
            <p>smiles: CC(CCOP([O-])(=O)OP([O-])(=O)O[C@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2NC(C)=O)[C@H](O)[C@H]1NC(C)=O)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C</p>
            <p>inchikey: AGKFOAYTTMSUFA-OXWYXBBUSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NN__45__DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PHE_c" id="M_PHE_c" name="L-phenylalanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 165.1891</p>
            <p>smiles: [NH3+][C@@H](Cc1ccccc1)C([O-])=O</p>
            <p>inchikey: COLNVLDHVKWLRT-QMMMGPOBSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PHE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H11NO2/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-5,8H,6,10H2,(H,11,12)/t8-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_CPD__45__190_c" id="M_CPD__45__190_c" name="N-acetyl-&amp;alpha;-D-glucosaminyl-diphosphodolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(CCOP([O-])(=O)OP([O-])(=O)O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1NC(C)=O)CC\C=C(\C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C</p>
            <p>inchikey: NSVKTXNITHYTDN-QQFUYBAXSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__190_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C33H59NO12P2/c1-23(2)12-8-13-24(3)14-9-15-25(4)16-10-17-26(5)18-11-19-27(6)20-21-43-47(39,40)46-48(41,42)45-33-30(34-28(7)36)32(38)31(37)29(22-35)44-33/h12,14,16,18,27,29-33,35,37-38H,8-11,13,15,17,19-22H2,1-7H3,(H,34,36)(H,39,40)(H,41,42)/p-2/b24-14+,25-16+,26-18-/t27?,29-,30-,31-,32-,33-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PHENYL__45__PYRUVATE_c" id="M_PHENYL__45__PYRUVATE_c" name="3-phenyl-2-oxopropanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H7O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 163.1506</p>
            <p>smiles: [O-]C(=O)C(=O)Cc1ccccc1</p>
            <p>inchikey: BTNMPGBKDVTSJY-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PHENYL__45__PYRUVATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H8O3/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-5H,6H2,(H,11,12)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ALPHA__45__D__45__MANNOSYLCHITOBIO_c" id="M_ALPHA__45__D__45__MANNOSYLCHITOBIO_c" name="&amp;beta;-D-Man-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;4)-&amp;alpha;-D-GlcNAc-diphosphodolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_7__45__8__45__DIHYDROPTEROATE_c" id="M_7__45__8__45__DIHYDROPTEROATE_c" name="7,8-dihydropteroate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C14H13N6O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 313.292</p>
            <p>smiles: Nc1nc2NCC(CNc3ccc(cc3)C([O-])=O)=Nc2c(=O)[nH]1</p>
            <p>inchikey: WBFYVDCHGVNRBH-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_7__45__8__45__DIHYDROPTEROATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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            <p>mass: 269.16</p>
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            <p>mass: 290.2681</p>
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        <notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 699.6276</p>
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            <p>mass: 985.785</p>
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            <p>mass: 983.769</p>
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            <p>mass: 333.1957</p>
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            <p>mass: 255.2306</p>
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C40H44N4O16/c45-33(46)5-1-17-21(9-37(53)54)29-14-26-19(3-7-35(49)50)23(11-39(57)58)31(43-26)16-28-20(4-8-36(51)52)24(12-40(59)60)32(44-28)15-27-18(2-6-34(47)48)22(10-38(55)56)30(42-27)13-25(17)41-29/h41-44H,1-16H2,(H,45,46)(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)/p-8"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__galactopyranose_c" id="M_D__45__galactopyranose_c" name="D-galactopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: WQZGKKKJIJFFOK-PHYPRBDBSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_D__45__galactopyranose_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4+,5-,6+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15590_c" id="M_CPD__45__15590_c" name="aldehydo-D-galactose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: [H]C(=O)[C@H](O)[C@@H](O)[C@@H](O)[C@H](O)CO</p>
            <p>inchikey: GZCGUPFRVQAUEE-KCDKBNATSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15590_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O6/c7-1-3(9)5(11)6(12)4(10)2-8/h1,3-6,8-12H,2H2/t3-,4+,5+,6-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15322_c" id="M_CPD__45__15322_c" name="L-homophenylalanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 179.2157</p>
            <p>smiles: [NH3+][C@@H](CCc1ccccc1)C([O-])=O</p>
            <p>inchikey: JTTHKOPSMAVJFE-VIFPVBQESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15322_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H13NO2/c11-9(10(12)13)7-6-8-4-2-1-3-5-8/h1-5,9H,6-7,11H2,(H,12,13)/t9-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15326_c" id="M_CPD__45__15326_c" name="2-oxo-4-phenylbutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H9O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 177.1772</p>
            <p>smiles: [O-]C(=O)C(=O)CCc1ccccc1</p>
            <p>inchikey: PPKAIMDMNWBOKN-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15326_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H10O3/c11-9(10(12)13)7-6-8-4-2-1-3-5-8/h1-5H,6-7H2,(H,12,13)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15373_c" id="M_CPD__45__15373_c" name="aldehydo-D-mannose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: [H]C(=O)[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO</p>
            <p>inchikey: GZCGUPFRVQAUEE-KVTDHHQDSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15373_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O6/c7-1-3(9)5(11)6(12)4(10)2-8/h1,3-6,8-12H,2H2/t3-,4-,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__mannopyranose_c" id="M_D__45__mannopyranose_c" name="D-mannopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H]1OC(O)[C@@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: WQZGKKKJIJFFOK-QTVWNMPRSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_D__45__mannopyranose_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15377_c" id="M_CPD__45__15377_c" name="aldehydo-D-xylose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.1299</p>
            <p>smiles: OC[C@@H](O)[C@H](O)[C@@H](O)C=O</p>
            <p>inchikey: PYMYPHUHKUWMLA-VPENINKCSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__15377_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15382_c" id="M_CPD__45__15382_c" name="keto-D-fructose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@@H](O)[C@@H](O)[C@H](O)C(=O)CO</p>
            <p>inchikey: BJHIKXHVCXFQLS-UYFOZJQFSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15382_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BETA__45__D__45__FRUCTOSE_c" id="M_BETA__45__D__45__FRUCTOSE_c" name="&amp;beta;-D-fructofuranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H]1O[C@](O)(CO)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: RFSUNEUAIZKAJO-ARQDHWQXSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BETA__45__D__45__FRUCTOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O6/c7-1-3-4(9)5(10)6(11,2-8)12-3/h3-5,7-11H,1-2H2/t3-,4-,5+,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_S__45__palmitoyl__45__L__45__cysteine__45__in__45__proteins_c" id="M_S__45__palmitoyl__45__L__45__cysteine__45__in__45__proteins_c" name="a [protein]-S-palmitoyl-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H35NO2SR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCCCCC(=O)SC[C@H](N*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Protein__45__L__45__methionine__45__R__45__S__45__oxides_c" id="M_Protein__45__L__45__methionine__45__R__45__S__45__oxides_c" name="a protein-L-methionine-(R)-S-oxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10N2O3SR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[S@@](=O)CC[C@H](NC([*])=O)C(=O)N[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Protein__45__L__45__methionine_c" id="M_Protein__45__L__45__methionine_c" name="a [protein]-L-methionine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NOSR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CSCC[C@H](N-*)C(-*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__8989_c" id="M_CPD__45__8989_c" name="L-methionine-(S)-S-oxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 165.211</p>
            <p>smiles: C[S@](=O)CC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: QEFRNWWLZKMPFJ-MFXDVPHUSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__8989_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__XYLULOSE_c" id="M_L__45__XYLULOSE_c" name="L-xylulose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.1299</p>
            <p>smiles: OC[C@H](O)[C@@H](O)C(=O)CO</p>
            <p>inchikey: ZAQJHHRNXZUBTE-WVZVXSGGSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__XYLULOSE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__8198_c" id="M_CPD__45__8198_c" name="methyl-2-&amp;alpha;-L-fucopyranosyl-&amp;beta;-D-galactoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H24O10">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 340.3237</p>
            <p>smiles: CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O[C@@H]1O[C@@H](C)[C@@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: ZUPSABSQBFCIOU-IBVRSMRASA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__8198_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C13H24O10/c1-4-6(15)8(17)10(19)12(21-4)23-11-9(18)7(16)5(3-14)22-13(11)20-2/h4-19H,3H2,1-2H3/t4-,5+,6+,7-,8+,9-,10-,11+,12-,13+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__Fucopyranoses_c" id="M_L__45__Fucopyranoses_c" name="L-fucopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 164.1565</p>
            <p>smiles: C[C@@H]1OC(O)[C@@H](O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: SHZGCJCMOBCMKK-DHVFOXMCSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_L__45__Fucopyranoses_c">
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        </annotation>
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      <species metaid="M_METHYL__45__BETA__45__D__45__GALACTOSIDE_c" id="M_METHYL__45__BETA__45__D__45__GALACTOSIDE_c" name="methyl-&amp;beta;-D-galactoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 194.1825</p>
            <p>smiles: CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O</p>
            <p>inchikey: HOVAGTYPODGVJG-VOQCIKJUSA-N</p>
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      <species metaid="M_CPD0__45__1163_c" id="M_CPD0__45__1163_c" name="(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H56N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 987.844</p>
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        <notes>
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            <p>mass: 969.828</p>
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      <species metaid="M_URACIL_c" id="M_URACIL_c" name="uracil" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4N2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 112.0868</p>
            <p>smiles: O=c1cc[nH]c(=O)[nH]1</p>
            <p>inchikey: ISAKRJDGNUQOIC-UHFFFAOYSA-N</p>
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        </notes>
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            <rdf:Description rdf:about="#M_URACIL_c">
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      <species metaid="M_PSEUDOURIDINE__45__5__45__P_c" id="M_PSEUDOURIDINE__45__5__45__P_c" name="pseudouridine 5&apos;-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H11N2O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 322.1665</p>
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            <p>inchikey: MOBMOJGXNHLLIR-GBNDHIKLSA-L</p>
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        </notes>
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            <rdf:Description rdf:about="#M_PSEUDOURIDINE__45__5__45__P_c">
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              </bqbiol:isVersionOf>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.095</p>
            <p>smiles: OC1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: KTVPXOYAKDPRHY-SOOFDHNKSA-L</p>
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      <species metaid="M_D__45__MYO__45__INOSITOL__45__1__45__MONOPHOSPHATE_c" id="M_D__45__MYO__45__INOSITOL__45__1__45__MONOPHOSPHATE_c" name="1D-myo-inositol 1-monophosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: O[C@H]1[C@H](O)[C@@H](O)[C@H](OP([O-])([O-])=O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: INAPMGSXUVUWAF-UOTPTPDRSA-L</p>
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      <species metaid="M_CONIFERYL__45__ALCOHOL_c" id="M_CONIFERYL__45__ALCOHOL_c" name="coniferyl alcohol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.2005</p>
            <p>smiles: COc1cc(\C=C\CO)ccc1O</p>
            <p>inchikey: JMFRWRFFLBVWSI-NSCUHMNNSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 179.1925</p>
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            <p>inchikey: ORAJWSYKRGVTDP-UHFFFAOYSA-N</p>
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      <species metaid="M_CPD__45__5662_c" id="M_CPD__45__5662_c" name="9-mercaptodethiobiotin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H17N2O3S">
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            <p>mass: 245.319</p>
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        <notes>
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            <p>mass: 1225.0621</p>
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        <notes>
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            <p>mass: 1062.9215</p>
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            <p>inchikey: PZUPAGRIHCRVKN-SPHBQONKSA-N</p>
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        </notes>
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          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__13375_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__13378_c" id="M_CPD__45__13378_c" name="XLLG xyloglucan oligosaccharide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C51H86O43">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1387.2027</p>
            <p>smiles: [H]C1(O)COC([H])(OC[C@@]2([H])O[C@@]([H])(O[C@]3([H])[C@@]([H])(COC4([H])OCC([H])(O)[C@]([H])(O)C4([H])O[C@]4([H])O[C@]([H])(CO)[C@]([H])(O)[C@]([H])(O)[C@@]4([H])O)O[C@@]([H])(O[C@]4([H])[C@@]([H])(COC5([H])OCC([H])(O)[C@]([H])(O)C5([H])O[C@]5([H])O[C@]([H])(CO)[C@]([H])(O)[C@]([H])(O)[C@@]5([H])O)O[C@@]([H])(O[C@]5([H])[C@@]([H])(CO)O[C@@]([H])(O)[C@]([H])(O)[C@@]5([H])O)[C@]([H])(O)[C@@]4([H])O)[C@]([H])(O)[C@@]3([H])O)[C@]([H])(O)[C@@]([H])(O)[C@]2([H])O)C([H])(O)[C@@]1([H])O</p>
            <p>inchikey: GSCHIGXDTVYEEM-MIGIYTHBSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Orthophosphoric__45__Monoesters_c" id="M_Orthophosphoric__45__Monoesters_c" name="a phosphate monoester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="O4PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]P([O-])(=O)O[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CIT_c" id="M_CIT_c" name="citrate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H5O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 189.1013</p>
            <p>smiles: OC(CC([O-])=O)(CC([O-])=O)C([O-])=O</p>
            <p>inchikey: KRKNYBCHXYNGOX-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CIT_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CIS__45__ACONITATE_c" id="M_CIS__45__ACONITATE_c" name="cis-aconitate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H3O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 171.0861</p>
            <p>smiles: [O-]C(=O)C\C(=C\C([O-])=O)C([O-])=O</p>
            <p>inchikey: GTZCVFVGUGFEME-IWQZZHSRSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CIS__45__ACONITATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H6O6/c7-4(8)1-3(6(11)12)2-5(9)10/h1H,2H2,(H,7,8)(H,9,10)(H,11,12)/p-3/b3-1-"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DEOXY__45__D__45__RIBOSE__45__1__45__PHOSPHATE_c" id="M_DEOXY__45__D__45__RIBOSE__45__1__45__PHOSPHATE_c" name="2-deoxy-&amp;alpha;-D-ribose 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 212.0956</p>
            <p>smiles: OC[C@H]1O[C@@H](C[C@@H]1O)OP([O-])([O-])=O</p>
            <p>inchikey: KBDKAJNTYKVSEK-VPENINKCSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DEOXY__45__D__45__RIBOSE__45__1__45__PHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DEOXY__45__RIBOSE__45__5P_c" id="M_DEOXY__45__RIBOSE__45__5P_c" name="2-deoxy-D-ribose 5-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 212.0956</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)[C@@H](O)CC=O</p>
            <p>inchikey: ALQNUOMIEBHXQG-CRCLSJGQSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DEOXY__45__RIBOSE__45__5P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__DEHYDRO__45__SHIKIMATE_c" id="M_3__45__DEHYDRO__45__SHIKIMATE_c" name="3-dehydroshikimate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H7O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 171.128</p>
            <p>smiles: O[C@@H]1CC(=CC(=O)[C@H]1O)C([O-])=O</p>
            <p>inchikey: SLWWJZMPHJJOPH-PHDIDXHHSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__DEHYDRO__45__SHIKIMATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PYRIDOXINE__45__5P_c" id="M_PYRIDOXINE__45__5P_c" name="pyridoxine 5&apos;-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C8H10NO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 247.143</p>
            <p>smiles: Cc1ncc(COP([O-])([O-])=O)c(CO)c1O</p>
            <p>inchikey: WHOMFKWHIQZTHY-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PYRIDOXINE__45__5P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H12NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2,10-11H,3-4H2,1H3,(H2,12,13,14)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PPI_e" id="M_PPI_e" name="diphosphate" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="HO7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.9529</p>
            <p>smiles: OP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: XPPKVPWEQAFLFU-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PPI_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)/p-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Histone__45__L__45__lysine_c" id="M_Histone__45__L__45__lysine_c" name="a [histone]-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C7H14N3O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]CCCC[C@H](NC([*])=O)C(=O)N[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Histone__45__Acetyl__45__Lysine_c" id="M_Histone__45__Acetyl__45__Lysine_c" name="a [histone]-N6-acetyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C8H15N2O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)NCCCC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__8579_c" id="M_CPD__45__8579_c" name="a [histone] N6-methyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C7H16N2OR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[NH2+]CCCC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_HSCN_c" id="M_HSCN_c" name="thiocyanate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CNS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 58.083</p>
            <p>smiles: [S-]C#N</p>
            <p>inchikey: ZMZDMBWJUHKJPS-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HSCN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CHNS/c2-1-3/h3H/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_THR_c" id="M_THR_c" name="L-threonine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 119.1192</p>
            <p>smiles: C[C@@H](O)[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: AYFVYJQAPQTCCC-GBXIJSLDSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_THR_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H9NO3/c1-2(6)3(5)4(7)8/h2-3,6H,5H2,1H3,(H,7,8)/t2-,3+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15436_c" id="M_CPD__45__15436_c" name="(5Z)-tetradecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H56N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 971.844</p>
            <p>smiles: CCCCCCCC\C=C/CCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: MRVDZOHJMLTLHJ-STFCKWFXSA-J</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__15436_c">
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            <p>mass: 193.132</p>
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            <p>mass: 955.802</p>
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            <p>mass: 929.765</p>
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            <p>mass: 971.801</p>
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            <p>mass: 927.749</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 74.0785</p>
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            <p>inchikey: BSABBBMNWQWLLU-VKHMYHEASA-N</p>
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        <notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 89.0705</p>
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 74.0785</p>
            <p>smiles: [H]C(=O)[C@@H](C)O</p>
            <p>inchikey: BSABBBMNWQWLLU-GSVOUGTGSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
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            <p>inchikey: KJXSIXMJHKAJOD-LSDHHAIUSA-N</p>
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      <species metaid="M_MYRICETIN_c" id="M_MYRICETIN_c" name="myricetin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H9O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 317.2277</p>
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            <p>inchikey: IKMDFBPHZNJCSN-UHFFFAOYSA-M</p>
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      <species metaid="M_DOPAQUINONE_c" id="M_DOPAQUINONE_c" name="dopaquinone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H9NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 195.1721</p>
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            <p>inchikey: AHMIDUVKSGCHAU-LURJTMIESA-N</p>
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      <species metaid="M_CPD__45__8652_c" id="M_CPD__45__8652_c" name="leucodopachrome" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H8NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 194.1647</p>
            <p>smiles: Oc1cc2C[C@H](Nc2cc1O)C([O-])=O</p>
            <p>inchikey: JDWYRSDDJVCWPB-LURJTMIESA-M</p>
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      <species metaid="M_CPD__45__8678_c" id="M_CPD__45__8678_c" name="9(S)-HPOTE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H29O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 309.421</p>
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      <species metaid="M_FRU1P_c" id="M_FRU1P_c" name="&amp;beta;-D-fructofuranose 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_3__45__hydroxy__45__cis__45__D9__45__hexaecenoyl__45__ACPs_c" id="M_3__45__hydroxy__45__cis__45__D9__45__hexaecenoyl__45__ACPs_c" name="a (3R,9Z)-3-hydroxyhexadec-9-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Trans__45__D3__45__cis__45__D9__45__hexadecenoyl__45__ACPs_c" id="M_Trans__45__D3__45__cis__45__D9__45__hexadecenoyl__45__ACPs_c" name="a (2E,9Z)-hexadeca-2,9-dienoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__730_c" id="M_CPD__45__730_c" name="8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
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      <species metaid="M_CPD__45__729_c" id="M_CPD__45__729_c" name="dinor-12-oxo-phytodienoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H27O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 291.4057</p>
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            <p>inchikey: PMTMAFAPLCGXGK-CLTKARDFSA-M</p>
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        <notes>
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            <p>mass: 1039.918</p>
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            <p>mass: 1037.902</p>
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            <p>inchikey: WDBPMRZYBZCIQE-WCBSGRPJSA-J</p>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PHOSPHORIBOSYL__45__ATP_c" id="M_PHOSPHORIBOSYL__45__ATP_c" name="1-(5-phospho-&amp;beta;-D-ribosyl)-ATP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-6" fbc:chemicalFormula="C15H19N5O20P4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 713.2312</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)n1cnc2c1ncn([C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O)c2=N</p>
            <p>inchikey: RKNHJBVBFHDXGR-KEOHHSTQSA-H</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        </annotation>
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      <species metaid="M_CPD__45__11519_c" id="M_CPD__45__11519_c" name="3-oxo-2-(cis-2&apos;-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H60N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1055.918</p>
            <p>smiles: [H]\C(CC)=C(/[H])CC1([H])C(=O)CCC1([H])CCCCCC([H])(O)CC(=O)SCC[NH+]=C([O-])CC[NH+]=C([O-])[C@]([H])(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@@]1([H])O[C@@]([H])(n2cnc3c(N)ncnc23)[C@]([H])(O)[C@]1([H])OP([O-])([O-])=O</p>
            <p>inchikey: PDDHCVXPABQISO-MFYIAUATSA-J</p>
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        </notes>
        <annotation>
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                </rdf:Bag>
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        </annotation>
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      <species metaid="M_CPD__45__11520_c" id="M_CPD__45__11520_c" name="3-oxo-2-(cis-2&apos;-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H58N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1053.902</p>
            <p>smiles: [H]\C(CC)=C(/[H])CC1([H])C(=O)CCC1([H])CCCCCC(=O)CC(=O)SCC[NH+]=C([O-])CC[NH+]=C([O-])[C@]([H])(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@@]1([H])O[C@@]([H])(n2cnc3c(N)ncnc23)[C@]([H])(O)[C@]1([H])OP([O-])([O-])=O</p>
            <p>inchikey: YYCCMACTOAJGGW-LHVXMLCWSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_RIBOSE__45__5P_c" id="M_RIBOSE__45__5P_c" name="D-ribose 5-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.095</p>
            <p>smiles: OC1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: KTVPXOYAKDPRHY-SOOFDHNKSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_RIBOSE__45__5P_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_XYLULOSE__45__5__45__PHOSPHATE_c" id="M_XYLULOSE__45__5__45__PHOSPHATE_c" name="D-xylulose 5-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.095</p>
            <p>smiles: OCC(=O)[C@@H](O)[C@H](O)COP([O-])([O-])=O</p>
            <p>inchikey: FNZLKVNUWIIPSJ-RFZPGFLSSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_XYLULOSE__45__5__45__PHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__SEDOHEPTULOSE__45__7__45__P_c" id="M_D__45__SEDOHEPTULOSE__45__7__45__P_c" name="D-sedoheptulose 7-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H13O10P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 288.147</p>
            <p>smiles: OCC(=O)[C@@H](O)[C@H](O)[C@H](O)[C@H](O)COP([O-])([O-])=O</p>
            <p>inchikey: JDTUMPKOJBQPKX-GBNDHIKLSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_D__45__SEDOHEPTULOSE__45__7__45__P_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_CPD__45__9245_c" id="M_CPD__45__9245_c" name="palmitoleate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C16H29O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 253.4008</p>
            <p>smiles: CCCCCC\C=C/CCCCCCCC([O-])=O</p>
            <p>inchikey: SECPZKHBENQXJG-FPLPWBNLSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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      </species>
      <species metaid="M_THREO__45__DS__45__ISO__45__CITRATE_c" id="M_THREO__45__DS__45__ISO__45__CITRATE_c" name="D-threo-isocitrate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H5O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 189.1013</p>
            <p>smiles: O[C@H]([C@H](CC([O-])=O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: ODBLHEXUDAPZAU-ZAFYKAAXSA-K</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_THREO__45__DS__45__ISO__45__CITRATE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_SORBITOL_c" id="M_SORBITOL_c" name="D-sorbitol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 182.1718</p>
            <p>smiles: OC[C@H](O)[C@@H](O)[C@H](O)[C@H](O)CO</p>
            <p>inchikey: FBPFZTCFMRRESA-JGWLITMVSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SORBITOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4+,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_D__45__SORBITOL__45__6__45__P_c" id="M_D__45__SORBITOL__45__6__45__P_c" name="D-sorbitol 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H13O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 260.1369</p>
            <p>smiles: OC[C@H](O)[C@@H](O)[C@H](O)[C@H](O)COP([O-])([O-])=O</p>
            <p>inchikey: GACTWZZMVMUKNG-SLPGGIOYSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_D__45__SORBITOL__45__6__45__P_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ACETYL__45__ACP_c" id="M_ACETYL__45__ACP_c" name="an acetyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_PUTRESCINE_c" id="M_PUTRESCINE_c" name="putrescine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C4H14N2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 90.1663</p>
            <p>smiles: [NH3+]CCCC[NH3+]</p>
            <p>inchikey: KIDHWZJUCRJVML-UHFFFAOYSA-P</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PUTRESCINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H12N2/c5-3-1-2-4-6/h1-6H2/p+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_S__45__ADENOSYLMETHIONINAMINE_c" id="M_S__45__ADENOSYLMETHIONINAMINE_c" name="S-adenosyl 3-(methylsulfanyl)propylamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C14H24N6O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 356.443</p>
            <p>smiles: C[S+](CCC[NH3+])C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: ZUNBITIXDCPNSD-LSRJEVITSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_S__45__ADENOSYLMETHIONINAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C14H23N6O3S/c1-24(4-2-3-15)5-8-10(21)11(22)14(23-8)20-7-19-9-12(16)17-6-18-13(9)20/h6-8,10-11,14,21-22H,2-5,15H2,1H3,(H2,16,17,18)/q+1/p+1/t8-,10-,11-,14-,24?/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__METHYLTHIOADENOSINE_c" id="M_5__45__METHYLTHIOADENOSINE_c" name="S-methyl-5&apos;-thioadenosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H15N5O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 297.334</p>
            <p>smiles: CSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: WUUGFSXJNOTRMR-IOSLPCCCSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__METHYLTHIOADENOSINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PHOSPHORYL__45__ETHANOLAMINE_c" id="M_PHOSPHORYL__45__ETHANOLAMINE_c" name="O-phosphoethanolamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2H7NO4P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 140.0556</p>
            <p>smiles: [NH3+]CCOP([O-])([O-])=O</p>
            <p>inchikey: SUHOOTKUPISOBE-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PHOSPHORYL__45__ETHANOLAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PALMITALDEHYDE_c" id="M_PALMITALDEHYDE_c" name="palmitaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H32O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 240.4247</p>
            <p>smiles: [H]C(=O)CCCCCCCCCCCCCCC</p>
            <p>inchikey: NIOYUNMRJMEDGI-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PALMITALDEHYDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C16H32O/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17/h16H,2-15H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__649_c" id="M_CPD__45__649_c" name="sphinganine 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H39NO5P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 380.4803</p>
            <p>smiles: CCCCCCCCCCCCCCC[C@@H](O)[C@@H]([NH3+])COP([O-])([O-])=O</p>
            <p>inchikey: YHEDRJPUIRMZMP-ZWKOTPCHSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__649_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C18H40NO5P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(20)17(19)16-24-25(21,22)23/h17-18,20H,2-16,19H2,1H3,(H2,21,22,23)/p-1/t17-,18+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ASN_c" id="M_ASN_c" name="L-asparagine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 132.1179</p>
            <p>smiles: NC(=O)C[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: DCXYFEDJOCDNAF-REOHCLBHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ASN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H8N2O3/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H2,6,7)(H,8,9)/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ASN__45__tRNAs_c" id="M_ASN__45__tRNAs_c" name="tRNAAsn" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Charged__45__ASN__45__tRNAs_c" id="M_Charged__45__ASN__45__tRNAs_c" name="an L-asparaginyl-[tRNAAsn]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Carboxyadenylated__45__MPT__45__synthases_c" id="M_Carboxyadenylated__45__MPT__45__synthases_c" name="a carboxy-adenylated [small subunit of molybdopterin synthase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Thiocarboxylated__45__MPT__45__synthases_c" id="M_Thiocarboxylated__45__MPT__45__synthases_c" name="a thiocarboxylated [small subunit of molybdopterin synthase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_N__45__ACETYL__45__GLUTAMYL__45__P_c" id="M_N__45__ACETYL__45__GLUTAMYL__45__P_c" name="N-acetylglutamyl-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C7H9NO8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 266.1237</p>
            <p>smiles: CC(=O)N[C@@H](CCC(=O)OP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: FCVIHFVSXHOPSW-YFKPBYRVSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_N__45__ACETYL__45__GLUTAMYL__45__P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H12NO8P/c1-4(9)8-5(7(11)12)2-3-6(10)16-17(13,14)15/h5H,2-3H2,1H3,(H,8,9)(H,11,12)(H2,13,14,15)/p-3/t5-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__3__45__HYDROXYACYL__45__COA_c" id="M_D__45__3__45__HYDROXYACYL__45__COA_c" name="a (3R)-3-hydroxyacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C24H35N7O18P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C[C@H](O)[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_ETOH_c" id="M_ETOH_c" name="ethanol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H6O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 46.0684</p>
            <p>smiles: CCO</p>
            <p>inchikey: LFQSCWFLJHTTHZ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ETOH_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H6O/c1-2-3/h3H,2H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Cis__45__2__45__enoyl__45__CoAs_c" id="M_Cis__45__2__45__enoyl__45__CoAs_c" name="a cis-2-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_DATP_c" id="M_DATP_c" name="dATP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O12P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 487.1521</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@H]1C[C@H](O)[C@@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)O1</p>
            <p>inchikey: SUYVUBYJARFZHO-RRKCRQDMSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DATP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N5O12P3/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(25-7)2-24-29(20,21)27-30(22,23)26-28(17,18)19/h3-7,16H,1-2H2,(H,20,21)(H,22,23)(H2,11,12,13)(H2,17,18,19)/p-4/t5-,6+,7+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__469_c" id="M_CPD__45__469_c" name="N-acetyl-L-glutamate 5-semialdehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H10NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 172.1591</p>
            <p>smiles: CC(=O)N[C@@H](CCC=O)C([O-])=O</p>
            <p>inchikey: BCPSFKBPHHBDAI-LURJTMIESA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__469_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H11NO4/c1-5(10)8-6(7(11)12)3-2-4-9/h4,6H,2-3H2,1H3,(H,8,10)(H,11,12)/p-1/t6-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CAAX__45__proteins_c" id="M_CAAX__45__proteins_c" name="a protein that ends with a CaaX sequence" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ACETYL__45__GLU_c" id="M_ACETYL__45__GLU_c" name="N-acetyl-L-glutamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H9NO5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 187.1512</p>
            <p>smiles: CC(=O)N[C@@H](CCC([O-])=O)C([O-])=O</p>
            <p>inchikey: RFMMMVDNIPUKGG-YFKPBYRVSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ACETYL__45__GLU_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD0__45__2244_c" id="M_CPD0__45__2244_c" name="(S)-3-hydroxydecanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C31H50N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 933.753</p>
            <p>smiles: CCCCCCC[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: HIVSMYZAMUNFKZ-PNPVFPMQSA-J</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD0__45__2244_c">
              <bqbiol:isVersionOf>
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      <species metaid="M_CPD0__45__2123_c" id="M_CPD0__45__2123_c" name="3-oxodecanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C31H48N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 931.737</p>
            <p>smiles: CCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: AZCVXMAPLHSIKY-HSJNEKGZSA-J</p>
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        </notes>
        <annotation>
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              <bqbiol:isVersionOf>
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      </species>
      <species metaid="M_3__45__DEOXY__45__D__45__ARABINO__45__HEPTULOSONATE__45__7__45__P_c" id="M_3__45__DEOXY__45__D__45__ARABINO__45__HEPTULOSONATE__45__7__45__P_c" name="3-deoxy-D-arabino-heptulosonate 7-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C7H10O10P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 285.1237</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H](O)CC(=O)C([O-])=O</p>
            <p>inchikey: PJWIPEXIFFQAQZ-PUFIMZNGSA-K</p>
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        </notes>
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            <rdf:Description rdf:about="#M_3__45__DEOXY__45__D__45__ARABINO__45__HEPTULOSONATE__45__7__45__P_c">
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                </rdf:Bag>
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      <species metaid="M_CPD__45__19010_c" id="M_CPD__45__19010_c" name="1,2-epoxy-2-methylpropane" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 72.1057</p>
            <p>smiles: CC1(C)CO1</p>
            <p>inchikey: GELKGHVAFRCJNA-UHFFFAOYSA-N</p>
          </body>
        </notes>
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      <species metaid="M_CPD__45__19013_c" id="M_CPD__45__19013_c" name="2-methylpropane-1,2-diol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H10O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 90.121</p>
            <p>smiles: CC(C)(O)CO</p>
            <p>inchikey: BTVWZWFKMIUSGS-UHFFFAOYSA-N</p>
          </body>
        </notes>
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      <species metaid="M_N1__45__ACETYLSPERMINE_c" id="M_N1__45__ACETYLSPERMINE_c" name="N1-acetylspermine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="3" fbc:chemicalFormula="C12H31N4O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 247.3991</p>
            <p>smiles: CC(=O)NCCC[NH2+]CCCC[NH2+]CCC[NH3+]</p>
            <p>inchikey: GUNURVWAJRRUAV-UHFFFAOYSA-Q</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_N1__45__ACETYLSPERMINE_c">
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      </species>
      <species metaid="M_Charged__45__THR__45__tRNAs_c" id="M_Charged__45__THR__45__tRNAs_c" name="an L-threonyl-[tRNAThr]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__568_c" id="M_CPD__45__568_c" name="N1-acetylspermidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C9H23N3O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 189.2973</p>
            <p>smiles: CC(=O)NCCC[NH2+]CCCC[NH3+]</p>
            <p>inchikey: MQTAVJHICJWXBR-UHFFFAOYSA-P</p>
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        </notes>
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      <species metaid="M_THR__45__tRNAs_c" id="M_THR__45__tRNAs_c" name="a tRNAThr" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_D__45__THREONINE_c" id="M_D__45__THREONINE_c" name="D-threonine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 119.1192</p>
            <p>smiles: C[C@H](O)[C@@H]([NH3+])C([O-])=O</p>
            <p>inchikey: AYFVYJQAPQTCCC-STHAYSLISA-N</p>
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      <species metaid="M_5__45__ppp__45__Pur__45__mRNA_c" id="M_5__45__ppp__45__Pur__45__mRNA_c" name="a 5&apos;-triphospho-purine-[mRNA]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__8630_c" id="M_CPD__45__8630_c" name="a diphospho-5&apos;-purine-3&apos;-[mRNA]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_PHOSPHORIBOSYL__45__AMP_c" id="M_PHOSPHORIBOSYL__45__AMP_c" name="1-(5-phospho-&amp;beta;-D-ribosyl)-AMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C15H19N5O14P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 555.2862</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP([O-])([O-])=O)n1cnc2c1ncn([C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O)c2=N</p>
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      <species metaid="M_All__45__apo__45__ACPs_c" id="M_All__45__apo__45__ACPs_c" name="all apo-acyl carrier proteins" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_All__45__holo__45__ACPs_c" id="M_All__45__holo__45__ACPs_c" name="all holo-acyl carrier proteins" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Cytochromes__45__c_c" id="M_Cytochromes__45__c_c" name="a c-type cytochrome" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_HEME_C_c" id="M_HEME_C_c" name="heme c" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H36FeN4O4S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 684.649</p>
            <p>smiles: CC(S)C1=C(C)C2=Cc3c(C(C)S)c(C)c4C=C5C(C)=C(CCC(O)=O)C6=[N+]5[Fe--]5(n34)n3c(=CC1=[N+]25)c(C)c(CCC(O)=O)c3=C6</p>
            <p>inchikey: XSWPXBWSKQRBRZ-IDTMDVKXSA-L</p>
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            <rdf:Description rdf:about="#M_HEME_C_c">
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      <species metaid="M_Apocytochromes__45__c_c" id="M_Apocytochromes__45__c_c" name="an apo-[c-type cytochrome]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD__45__12483_c" id="M_CPD__45__12483_c" name="1,7-dimethylurate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8N4O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 196.1634</p>
            <p>smiles: Cn1c2c([nH]c1=O)[nH]c(=O)n(C)c2=O</p>
            <p>inchikey: NOFNCLGCUJJPKU-UHFFFAOYSA-N</p>
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        <annotation>
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      <species metaid="M_CPD__45__12481_c" id="M_CPD__45__12481_c" name="7-methylurate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H6N4O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 182.1368</p>
            <p>smiles: Cn1c2c([nH]c1=O)[nH]c(=O)[nH]c2=O</p>
            <p>inchikey: YHNNPKUFPWLTOP-UHFFFAOYSA-N</p>
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      <species metaid="M_CPD__45__10494_c" id="M_CPD__45__10494_c" name="ferrileghemoglobin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__10495_c" id="M_CPD__45__10495_c" name="ferroleghemoglobin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD__45__11521_c" id="M_CPD__45__11521_c" name="3-oxo-2-(cis-2&apos;-pentenyl)-cyclopentane-1-hexanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H56N7O18P3S">
        <notes>
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            <p>mass: 1011.865</p>
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        <notes>
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            <p>mass: 929.765</p>
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        <notes>
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            <p>mass: 955.802</p>
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            <p>mass: 971.801</p>
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        </annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 927.749</p>
            <p>smiles: CCCCCC\C=C\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1027.865</p>
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            <p>inchikey: OMDQVIUYDJAWHX-QUEZHLOUSA-J</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 336.0861</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 901.711</p>
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        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 943.748</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 999.811</p>
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      <species metaid="M_GLYCERALD_c" id="M_GLYCERALD_c" name="D-glyceraldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 90.0779</p>
            <p>smiles: [H]C(=O)[C@H](O)CO</p>
            <p>inchikey: MNQZXJOMYWMBOU-VKHMYHEASA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 386.3135</p>
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      <species metaid="M_CPD__45__8890_c" id="M_CPD__45__8890_c" name="betanidin quinone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C18H12N2O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 384.2976</p>
            <p>smiles: [O-]C(=O)[C@@H]1CC2=CC(=O)C(=O)C=C2N1C=CC1=CC(=[NH+][C@@H](C1)C([O-])=O)C([O-])=O</p>
            <p>inchikey: WAVPHGICHZOYMQ-AAEUAGOBSA-L</p>
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      <species metaid="M_Sphingoids_c" id="M_Sphingoids_c" name="a sphingoid base" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H9NO2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+][C@@H](CO)[C@H](O)[*]</p>
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        </notes>
      </species>
      <species metaid="M_Ceramides_c" id="M_Ceramides_c" name="a ceramide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO2R3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@H]([*])[C@H](C[*])NC([*])=O</p>
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        </notes>
      </species>
      <species metaid="M_L__45__GLUTAMATE_GAMMA__45__SEMIALDEHYDE_c" id="M_L__45__GLUTAMATE_GAMMA__45__SEMIALDEHYDE_c" name="L-glutamate-5-semialdehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO3">
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 131.1299</p>
            <p>smiles: [H]C(=O)CC[C@H]([NH3+])C([O-])=O</p>
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      <species metaid="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" id="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" name="an oxidized [NADPH-hemoprotein reductase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" id="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" name="a reduced [NADPH-hemoprotein reductase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_EPOXYSQUALENE_c" id="M_EPOXYSQUALENE_c" name="(3S)-2,3-epoxy-2,3-dihydrosqualene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H50O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 426.7174</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C=C(/C)CC\C=C(/C)CC[C@@H]1OC1(C)C</p>
            <p>inchikey: QYIMSPSDBYKPPY-RSKUXYSASA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_EPOXYSQUALENE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C30H50O/c1-24(2)14-11-17-27(5)20-12-18-25(3)15-9-10-16-26(4)19-13-21-28(6)22-23-29-30(7,8)31-29/h14-16,20-21,29H,9-13,17-19,22-23H2,1-8H3/b25-15+,26-16+,27-20+,28-21+/t29-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_S__45__ADENOSYL__45__4__45__METHYLTHIO__45__2__45__OXOBUTANOATE_c" id="M_S__45__ADENOSYL__45__4__45__METHYLTHIO__45__2__45__OXOBUTANOATE_c" name="S-adenosyl-4-methylsulfanyl-2-oxobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N5O6S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 397.406</p>
            <p>smiles: C[S+](CCC(=O)C([O-])=O)C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: UOKVQQMBGVMXPU-CJPDYEHRSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C15H19N5O6S/c1-27(3-2-7(21)15(24)25)4-8-10(22)11(23)14(26-8)20-6-19-9-12(16)17-5-18-13(9)20/h5-6,8,10-11,14,22-23H,2-4H2,1H3,(H2-,16,17,18,24,25)/t8-,10-,11-,14-,27?/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_8__45__AMINO__45__7__45__OXONONANOATE_c" id="M_8__45__AMINO__45__7__45__OXONONANOATE_c" name="8-amino-7-oxononanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H17NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 187.2362</p>
            <p>smiles: CC([NH3+])C(=O)CCCCCC([O-])=O</p>
            <p>inchikey: GUAHPAJOXVYFON-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_8__45__AMINO__45__7__45__OXONONANOATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H17NO3/c1-7(10)8(11)5-3-2-4-6-9(12)13/h7H,2-6,10H2,1H3,(H,12,13)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DCTP_c" id="M_DCTP_c" name="dCTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H12N3O13P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 463.1274</p>
            <p>smiles: Nc1ccn([C@H]2C[C@H](O)[C@@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)O2)c(=O)n1</p>
            <p>inchikey: RGWHQCVHVJXOKC-SHYZEUOFSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DCTP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H16N3O13P3/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(23-8)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,13H,3-4H2,(H,18,19)(H,20,21)(H2,10,11,14)(H2,15,16,17)/p-4/t5-,6+,8+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD0__45__2171_c" id="M_CPD0__45__2171_c" name="(S)-3-hydroxytetradecanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H58N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 989.86</p>
            <p>smiles: CCCCCCCCCCC[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: OXBHKMHNDGRDCZ-STLSENOWSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD0__45__2171_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C35H62N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-23(43)18-26(45)64-17-16-37-25(44)14-15-38-33(48)30(47)35(2,3)20-57-63(54,55)60-62(52,53)56-19-24-29(59-61(49,50)51)28(46)34(58-24)42-22-41-27-31(36)39-21-40-32(27)42/h21-24,28-30,34,43,46-47H,4-20H2,1-3H3,(H,37,44)(H,38,48)(H,52,53)(H,54,55)(H2,36,39,40)(H2,49,50,51)/p-4/t23-,24+,28+,29+,30-,34+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_O__45__PHOSPHO__45__L__45__HOMOSERINE_c" id="M_O__45__PHOSPHO__45__L__45__HOMOSERINE_c" name="O-phospho-L-homoserine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H8NO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 197.0843</p>
            <p>smiles: [NH3+][C@@H](CCOP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: FXDNYOANAXWZHG-VKHMYHEASA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_O__45__PHOSPHO__45__L__45__HOMOSERINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H10NO6P/c5-3(4(6)7)1-2-11-12(8,9)10/h3H,1-2,5H2,(H,6,7)(H2,8,9,10)/p-2/t3-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__10284_c" id="M_CPD__45__10284_c" name="3-oxo-myristoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H56N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 987.844</p>
            <p>smiles: CCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: IQNFBGHLIVBNOU-QSGBVPJFSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__10284_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C35H60N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-23(43)18-26(45)64-17-16-37-25(44)14-15-38-33(48)30(47)35(2,3)20-57-63(54,55)60-62(52,53)56-19-24-29(59-61(49,50)51)28(46)34(58-24)42-22-41-27-31(36)39-21-40-32(27)42/h21-22,24,28-30,34,46-47H,4-20H2,1-3H3,(H,37,44)(H,38,48)(H,52,53)(H,54,55)(H2,36,39,40)(H2,49,50,51)/p-4/t24-,28-,29-,30+,34-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Pyruvate__45__dehydrogenase__45__acetylDHlipoyl_c" id="M_Pyruvate__45__dehydrogenase__45__acetylDHlipoyl_c" name="a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H18O2S2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_trans__45__2__45__cis__45__5__45__dienoyl__45__CoA_c" id="M_trans__45__2__45__cis__45__5__45__dienoyl__45__CoA_c" name="a (2E,5Z)-alka-2,5-dienoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DUMP_c" id="M_DUMP_c" name="dUMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H11N2O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 306.1671</p>
            <p>smiles: O[C@H]1C[C@@H](O[C@@H]1COP([O-])([O-])=O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: JSRLJPSBLDHEIO-SHYZEUOFSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DUMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H13N2O8P/c12-5-3-8(11-2-1-7(13)10-9(11)14)19-6(5)4-18-20(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,10,13,14)(H2,15,16,17)/p-2/t5-,6+,8+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_cis__45__5__45__enoyl__45__CoA_c" id="M_cis__45__5__45__enoyl__45__CoA_c" name="a (5Z)-alkan-5-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_TMP_c" id="M_TMP_c" name="dTMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H13N2O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 320.1937</p>
            <p>smiles: Cc1cn([C@H]2C[C@H](O)[C@@H](COP([O-])([O-])=O)O2)c(=O)[nH]c1=O</p>
            <p>inchikey: GYOZYWVXFNDGLU-XLPZGREQSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_TMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H15N2O8P/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(20-8)4-19-21(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,11,14,15)(H2,16,17,18)/p-2/t6-,7+,8+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_TETRADEHYDROACYL__45__COA_c" id="M_TETRADEHYDROACYL__45__COA_c" name="a (2E,4E)-alka-2,4-dienoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H35N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)\C=C\C=C\[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Trans__45__3__45__enoyl__45__CoAs_c" id="M_Trans__45__3__45__enoyl__45__CoAs_c" name="a (3E)-alk-3-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H35N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C\C=C\[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__479_c" id="M_CPD__45__479_c" name="4-(methylsulfanyl)-2-oxobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H7O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 147.173</p>
            <p>smiles: CSCCC(=O)C([O-])=O</p>
            <p>inchikey: SXFSQZDSUWACKX-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__479_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H8O3S/c1-9-3-2-4(6)5(7)8/h2-3H2,1H3,(H,7,8)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ETHYLENE__45__CMPD_c" id="M_ETHYLENE__45__CMPD_c" name="ethene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 28.0532</p>
            <p>smiles: C=C</p>
            <p>inchikey: VGGSQFUCUMXWEO-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ETHYLENE__45__CMPD_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H4/c1-2/h1-2H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__7671_c" id="M_CPD__45__7671_c" name="methanethiol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 48.107</p>
            <p>smiles: CS</p>
            <p>inchikey: LSDPWZHWYPCBBB-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__7671_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CH4S/c1-2/h2H,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__1083_c" id="M_CPD__45__1083_c" name="(E)-2-methylcrotonoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H38N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 845.605</p>
            <p>smiles: CC=C(C)C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: PMWATMXOQQZNBX-DKBZLLMOSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__1083_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C26H42N7O17P3S/c1-5-14(2)25(38)54-9-8-28-16(34)6-7-29-23(37)20(36)26(3,4)11-47-53(44,45)50-52(42,43)46-10-15-19(49-51(39,40)41)18(35)24(48-15)33-13-32-17-21(27)30-12-31-22(17)33/h5,12-13,15,18-20,24,35-36H,6-11H2,1-4H3,(H,28,34)(H,29,37)(H,42,43)(H,44,45)(H2,27,30,31)(H2,39,40,41)/p-4/b14-5+/t15-,18-,19-,20+,24-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_FE__43__3_c" id="M_FE__43__3_c" name="Fe3+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="3" fbc:chemicalFormula="Fe">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 55.843</p>
            <p>smiles: [Fe+3]</p>
            <p>inchikey: VTLYFUHAOXGGBS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FE__43__3_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Fe/q+3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DL__45__12__45__Propanediol_c" id="M_DL__45__12__45__Propanediol_c" name="propane-1,2-diol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 76.0944</p>
            <p>smiles: CC(O)CO</p>
            <p>inchikey: DNIAPMSPPWPWGF-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DL__45__12__45__Propanediol_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H8O2/c1-3(5)2-4/h3-5H,2H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_12__45__EPOXYPROPANE_c" id="M_12__45__EPOXYPROPANE_c" name="1,2-epoxypropane" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 58.0791</p>
            <p>smiles: [H]C1(C)CO1</p>
            <p>inchikey: GOOHAUXETOMSMM-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_12__45__EPOXYPROPANE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H6O/c1-3-2-4-3/h3H,2H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__AMINO__45__LEVULINATE_c" id="M_5__45__AMINO__45__LEVULINATE_c" name="5-aminolevulinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 131.1299</p>
            <p>smiles: [NH3+]CC(=O)CCC([O-])=O</p>
            <p>inchikey: ZGXJTSGNIOSYLO-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__AMINO__45__LEVULINATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H9NO3/c6-3-4(7)1-2-5(8)9/h1-3,6H2,(H,8,9)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PORPHOBILINOGEN_c" id="M_PORPHOBILINOGEN_c" name="porphobilinogen" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H13N2O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 225.2218</p>
            <p>smiles: [NH3+]Cc1[nH]cc(CCC([O-])=O)c1CC([O-])=O</p>
            <p>inchikey: QSHWIQZFGQKFMA-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PORPHOBILINOGEN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H14N2O4/c11-4-8-7(3-10(15)16)6(5-12-8)1-2-9(13)14/h5,12H,1-4,11H2,(H,13,14)(H,15,16)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Protein__45__Lysine__45__Aminocarbinol_c" id="M_Protein__45__Lysine__45__Aminocarbinol_c" name="an N6-(1-hydroxy-2-oxopropyl)-[protein]-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C9H18N2O3R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)C(O)[NH2+]CCCC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_RIBOSE__45__1P_c" id="M_RIBOSE__45__1P_c" name="&amp;alpha;-D-ribose-1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.095</p>
            <p>smiles: OC[C@H]1O[C@H](OP([O-])([O-])=O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: YXJDFQJKERBOBM-TXICZTDVSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_RIBOSE__45__1P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H11O8P/c6-1-2-3(7)4(8)5(12-2)13-14(9,10)11/h2-8H,1H2,(H2,9,10,11)/p-2/t2-,3-,4-,5-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_METHYL__45__GLYOXAL_c" id="M_METHYL__45__GLYOXAL_c" name="methylglyoxal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H4O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 72.0627</p>
            <p>smiles: [H]C(=O)C(C)=O</p>
            <p>inchikey: AIJULSRZWUXGPQ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_METHYL__45__GLYOXAL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H4O2/c1-3(5)2-4/h2H,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2R__45__3R__45__Dihydroflavonols_c" id="M_2R__45__3R__45__Dihydroflavonols_c" name="a (2R,3R)-dihydroflavonol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H3O3R9">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@@H]1[C@H](Oc2c(*)c(*)c(*)c(*)c2C1=O)c1c(*)c(*)c(*)c(*)c1*</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Flavonols_c" id="M_Flavonols_c" name="a flavonol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H4O3R5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]c1c(oc2cc([*])cc([*])c2c1=O)-c1cc([*])c([*])c([*])c1</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__17282_c" id="M_CPD__45__17282_c" name="a [glycerolipid]-(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H29OR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCC(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__14018_c" id="M_CPD__45__14018_c" name="(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C41H60N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1047.94</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: JWZLRYCDDXHXDL-LCMHIRPZSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__14018_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C41H64N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-32(50)69-25-24-43-31(49)22-23-44-39(53)36(52)41(2,3)27-62-68(59,60)65-67(57,58)61-26-30-35(64-66(54,55)56)34(51)40(63-30)48-29-47-33-37(42)45-28-46-38(33)48/h5-6,8-9,11-12,14-15,17-18,28-30,34-36,40,51-52H,4,7,10,13,16,19-27H2,1-3H3,(H,43,49)(H,44,53)(H,57,58)(H,59,60)(H2,42,45,46)(H2,54,55,56)/p-4/b6-5-,9-8-,12-11-,15-14-,18-17-/t30-,34-,35-,36+,40-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_N__45__5__45__PHOSPHORIBOSYL__45__ANTHRANILATE_c" id="M_N__45__5__45__PHOSPHORIBOSYL__45__ANTHRANILATE_c" name="N-(5-phosphoribosyl)-anthranilate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C12H13NO9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 346.2083</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@H](Nc2ccccc2C([O-])=O)O[C@@H]1COP([O-])([O-])=O</p>
            <p>inchikey: PMFMJXPRNJUYMB-GWOFURMSSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_N__45__5__45__PHOSPHORIBOSYL__45__ANTHRANILATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H16NO9P/c14-9-8(5-21-23(18,19)20)22-11(10(9)15)13-7-4-2-1-3-6(7)12(16)17/h1-4,8-11,13-15H,5H2,(H,16,17)(H2,18,19,20)/p-3/t8-,9-,10-,11-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Glycerolipids_c" id="M_Glycerolipids_c" name="a glycerolipid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CARBOXYPHENYLAMINO__45__DEOXYRIBULOSE__45__P_c" id="M_CARBOXYPHENYLAMINO__45__DEOXYRIBULOSE__45__P_c" name="1-(o-carboxyphenylamino)-1&apos;-deoxyribulose 5&apos;-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C12H13NO9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 346.2083</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)[C@@H](O)C(=O)CNc1ccccc1C([O-])=O</p>
            <p>inchikey: QKMBYNRMPRKVTO-MNOVXSKESA-K</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_1__45__Alkyl__45__2__45__acyl__45__glycerol__45__3__45__phosphate_c" id="M_1__45__Alkyl__45__2__45__acyl__45__glycerol__45__3__45__phosphate_c" name="a 2-acyl-1-alkyl-sn-glycerol 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O6PRR2CO">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 226.2065</p>
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            <p>inchikey: MIEILDYWGANZNH-DSQUFTABSA-M</p>
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            <p>smiles: OC[C@@H](CO[*])OC([*])=O</p>
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      <species metaid="M_PREPHENATE_c" id="M_PREPHENATE_c" name="prephenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H8O6">
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            <p>mass: 224.168</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_LEU__45__tRNAs_c" id="M_LEU__45__tRNAs_c" name="a tRNALeu" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 317.443</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 335.4583</p>
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      <species metaid="M_LINOLENOYL__45__COA_c" id="M_LINOLENOYL__45__COA_c" name="&amp;alpha;-linolenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H60N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1023.919</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 969.828</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 967.813</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 941.775</p>
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        </notes>
        <annotation>
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      <species metaid="M_CPD__45__15687_c" id="M_CPD__45__15687_c" name="5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H52N7O18P3S">
        <notes>
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            <p>mass: 983.812</p>
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        </notes>
        <annotation>
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      <species metaid="M_CPD__45__15692_c" id="M_CPD__45__15692_c" name="(3E)-dec-3-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C31H48N7O17P3S">
        <notes>
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            <p>mass: 915.738</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 957.775</p>
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            <p>inchikey: VKLHSLOWDWGVGP-WOABMHMMSA-J</p>
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      <species metaid="M_HOMO__45__I__45__CIT_c" id="M_HOMO__45__I__45__CIT_c" name="HOMO-I-CIT" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C7H7O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 203.1279</p>
            <p>smiles: O[C@H]([C@H](CCC([O-])=O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: OEJZZCGRGVFWHK-WVZVXSGGSA-K</p>
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      <species metaid="M_HOMO__45__CIS__45__ACONITATE_c" id="M_HOMO__45__CIS__45__ACONITATE_c" name="HOMO-CIS-ACONITATE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C7H5O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 185.1126</p>
            <p>smiles: [O-]C(=O)CC\C(=C\C([O-])=O)C([O-])=O</p>
            <p>inchikey: BJYPZFUWWJSAKC-ARJAWSKDSA-K</p>
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      <species metaid="M_CPD__45__15699_c" id="M_CPD__45__15699_c" name="aldehydo-L-arabinose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.1299</p>
            <p>smiles: [H]C(=O)[C@H](O)[C@@H](O)[C@@H](O)CO</p>
            <p>inchikey: PYMYPHUHKUWMLA-VAYJURFESA-N</p>
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        </notes>
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              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_L__45__arabinofuranose_c" id="M_L__45__arabinofuranose_c" name="L-arabinofuranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.1299</p>
            <p>smiles: OC[C@@H]1OC(O)[C@H](O)[C@H]1O</p>
            <p>inchikey: HMFHBZSHGGEWLO-HWQSCIPKSA-N</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_L__45__arabinofuranose_c">
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      <species metaid="M_CPD__45__9569_c" id="M_CPD__45__9569_c" name="L-sorbopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OCC1(O)OC[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: LKDRXBCSQODPBY-AMVSKUEXSA-N</p>
          </body>
        </notes>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__15616_c" id="M_CPD__45__15616_c" name="keto-L-sorbose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H](O)[C@@H](O)[C@H](O)C(=O)CO</p>
            <p>inchikey: BJHIKXHVCXFQLS-OTWZMJIISA-N</p>
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        </notes>
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      </species>
      <species metaid="M_CPD__45__15709_c" id="M_CPD__45__15709_c" name="keto-D-fructose 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__15619_c" id="M_CPD__45__15619_c" name="aldehydo-L-fucose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 164.1565</p>
            <p>smiles: C[C@@H]1OC(O)[C@@H](O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: SHZGCJCMOBCMKK-DHVFOXMCSA-N</p>
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        </notes>
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      <species metaid="M_CPD__45__11522_c" id="M_CPD__45__11522_c" name="3-oxo-2-(cis-2&apos;-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H54N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1009.849</p>
            <p>smiles: [H]\C(CC)=C(/[H])CC1([H])C(=O)CCC1([H])CCC\C([H])=C(/[H])C(=O)SCC[NH+]=C([O-])CC[NH+]=C([O-])[C@]([H])(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@@]1([H])O[C@@]([H])(n2cnc3c(N)ncnc23)[C@]([H])(O)[C@]1([H])OP([O-])([O-])=O</p>
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      <species metaid="M_CPD__45__11526_c" id="M_CPD__45__11526_c" name="3-oxo-2-(cis-2&apos;-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H50N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 981.796</p>
            <p>smiles: [H]\C(CC)=C(/[H])CC1([H])C(=O)CCC1([H])C\C([H])=C(/[H])C(=O)SCC[NH+]=C([O-])CC[NH+]=C([O-])[C@]([H])(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@@]1([H])O[C@@]([H])(n2cnc3c(N)ncnc23)[C@]([H])(O)[C@]1([H])OP([O-])([O-])=O</p>
            <p>inchikey: QSAQFDYWYNLXEC-RBHATRMTSA-J</p>
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      <species metaid="M_DCDP_c" id="M_DCDP_c" name="dCDP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H12N3O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 384.1548</p>
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            <p>inchikey: FTDHDKPUHBLBTL-SHYZEUOFSA-K</p>
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            <rdf:Description rdf:about="#M_DCDP_c">
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        </annotation>
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      <species metaid="M_DCMP_c" id="M_DCMP_c" name="dCMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H12N3O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 305.1823</p>
            <p>smiles: Nc1ccn([C@H]2C[C@H](O)[C@@H](COP([O-])([O-])=O)O2)c(=O)n1</p>
            <p>inchikey: NCMVOABPESMRCP-SHYZEUOFSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DCMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H14N3O7P/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(19-8)4-18-20(15,16)17/h1-2,5-6,8,13H,3-4H2,(H2,10,11,14)(H2,15,16,17)/p-2/t5-,6+,8+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_INOSITOL__45__1__45__4__45__BISPHOSPHATE_c" id="M_INOSITOL__45__1__45__4__45__BISPHOSPHATE_c" name="D-myo-inositol (1,4)-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 336.0861</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](OP([O-])([O-])=O)[C@H](O)[C@@H](O)[C@@H]1OP([O-])([O-])=O</p>
            <p>inchikey: PELZSPZCXGTUMR-RTPHHQFDSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_INOSITOL__45__1__45__4__45__BISPHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H14O12P2/c7-1-2(8)6(18-20(14,15)16)4(10)3(9)5(1)17-19(11,12)13/h1-10H,(H2,11,12,13)(H2,14,15,16)/p-4/t1-,2-,3-,4+,5+,6+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__8891_c" id="M_CPD__45__8891_c" name="(R)-propane-1,2-diol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 76.0944</p>
            <p>smiles: C[C@@H](O)CO</p>
            <p>inchikey: DNIAPMSPPWPWGF-GSVOUGTGSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__8891_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H8O2/c1-3(5)2-4/h3-5H,2H2,1H3/t3-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_INOSITOL__45__1__45__4__45__5__45__TRISPHOSPHATE_c" id="M_INOSITOL__45__1__45__4__45__5__45__TRISPHOSPHATE_c" name="D-myo-inositol (1,4,5)-trisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-6" fbc:chemicalFormula="C6H9O15P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 414.0512</p>
            <p>smiles: O[C@@H]1[C@H](O)[C@@H](OP([O-])([O-])=O)[C@H](OP([O-])([O-])=O)[C@@H](O)[C@@H]1OP([O-])([O-])=O</p>
            <p>inchikey: MMWCIQZXVOZEGG-XJTPDSDZSA-H</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_INOSITOL__45__1__45__4__45__5__45__TRISPHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H15O15P3/c7-1-2(8)5(20-23(13,14)15)6(21-24(16,17)18)3(9)4(1)19-22(10,11)12/h1-9H,(H2,10,11,12)(H2,13,14,15)(H2,16,17,18)/p-6/t1-,2+,3+,4-,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_OXALO__45__SUCCINATE_c" id="M_OXALO__45__SUCCINATE_c" name="oxalosuccinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H3O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 187.0855</p>
            <p>smiles: [O-]C(=O)CC(C([O-])=O)C(=O)C([O-])=O</p>
            <p>inchikey: UFSCUAXLTRFIDC-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OXALO__45__SUCCINATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H6O7/c7-3(8)1-2(5(10)11)4(9)6(12)13/h2H,1H2,(H,7,8)(H,10,11)(H,12,13)/p-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_6E8Z11Z14Z__45__5S__45__5__45__HYDROPEROXYCOSA__45__6_c" id="M_6E8Z11Z14Z__45__5S__45__5__45__HYDROPEROXYCOSA__45__6_c" name="(5S)-HPETE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H31O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 335.4583</p>
            <p>smiles: CCCCC\C=C/C\C=C/C\C=C/C=C/[C@H](CCCC([O-])=O)OO</p>
            <p>inchikey: JNUUNUQHXIOFDA-JGKLHWIESA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_6E8Z11Z14Z__45__5S__45__5__45__HYDROPEROXYCOSA__45__6_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H32O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-16-19(24-23)17-15-18-20(21)22/h6-7,9-10,12-14,16,19,23H,2-5,8,11,15,17-18H2,1H3,(H,21,22)/p-1/b7-6-,10-9-,13-12-,16-14+/t19-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__MYO__45__INOSITOL__45__4__45__PHOSPHATE_c" id="M_D__45__MYO__45__INOSITOL__45__4__45__PHOSPHATE_c" name="1D-myo-inositol 4-monophosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: O[C@@H]1[C@H](O)[C@H](O)[C@@H](OP([O-])([O-])=O)[C@H](O)[C@H]1O</p>
            <p>inchikey: INAPMGSXUVUWAF-CNWJWELYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_D__45__MYO__45__INOSITOL__45__4__45__PHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H13O9P/c7-1-2(8)4(10)6(5(11)3(1)9)15-16(12,13)14/h1-11H,(H2,12,13,14)/p-2/t1-,2-,3-,4+,5-,6-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__506_c" id="M_CPD__45__506_c" name="D-myo-inositol (1,3,4,5)-tetrakisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-8" fbc:chemicalFormula="C6H8O18P4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 492.0164</p>
            <p>smiles: O[C@H]1[C@@H](OP([O-])([O-])=O)[C@H](O)[C@@H](OP([O-])([O-])=O)[C@H](OP([O-])([O-])=O)[C@H]1OP([O-])([O-])=O</p>
            <p>inchikey: CIPFCGZLFXVXBG-CNWJWELYSA-F</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__506_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H16O18P4/c7-1-3(21-25(9,10)11)2(8)5(23-27(15,16)17)6(24-28(18,19)20)4(1)22-26(12,13)14/h1-8H,(H2,9,10,11)(H2,12,13,14)(H2,15,16,17)(H2,18,19,20)/p-8/t1-,2-,3-,4+,5-,6-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__8901_c" id="M_CPD__45__8901_c" name="a [protein] N6-methyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C7H16N2OR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[NH2+]CCCC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__177_c" id="M_CPD__45__177_c" name="a 1-phosphatidyl-1D-myo-inositol 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C11H15O16P2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@@](COC([*])=O)(COP([O-])(=O)O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](OP([O-])([O-])=O)[C@H]1O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__34__45__BISPH_c" id="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__34__45__BISPH_c" name="a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C11H14O19P3R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@@](COC([*])=O)(COP([O-])(=O)O[C@H]1[C@H](O)[C@@H](O)[C@H](OP([O-])([O-])=O)[C@@H](OP([O-])([O-])=O)[C@H]1O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_PHOSPHATIDYLINOSITOL__45__345__45__TRIPHOSPHATE_c" id="M_PHOSPHATIDYLINOSITOL__45__345__45__TRIPHOSPHATE_c" name="1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-7" fbc:chemicalFormula="C11H13O22P4R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@@](COC([*])=O)(COP([O-])(=O)O[C@@H]1[C@H](O)[C@H](OP([O-])([O-])=O)[C@@H](OP([O-])([O-])=O)[C@H](OP([O-])([O-])=O)[C@H]1O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_PHOSPHATIDYL__45__MYO__45__INOSITOL__45__45__45__BISPHOSPHA_c" id="M_PHOSPHATIDYL__45__MYO__45__INOSITOL__45__45__45__BISPHOSPHA_c" name="a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C11H14O19P3R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@@](COC([*])=O)(COP([O-])(=O)O[C@@H]1[C@H](O)[C@H](O)[C@@H](OP([O-])([O-])=O)[C@H](OP([O-])([O-])=O)[C@H]1O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_ETF__45__Reduced_c" id="M_ETF__45__Reduced_c" name="a reduced electron-transfer flavoprotein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2__45__KETO__45__ISOVALERATE_c" id="M_2__45__KETO__45__ISOVALERATE_c" name="3-methyl-2-oxobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H7O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 115.1078</p>
            <p>smiles: CC(C)C(=O)C([O-])=O</p>
            <p>inchikey: QHKABHOOEWYVLI-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2__45__KETO__45__ISOVALERATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H8O3/c1-3(2)4(6)5(7)8/h3H,1-2H3,(H,7,8)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ETF__45__Oxidized_c" id="M_ETF__45__Oxidized_c" name="an oxidized electron-transfer flavoprotein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD66__45__39_c" id="M_CPD66__45__39_c" name="a 2,3,4-saturated fatty acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H6O2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)CCC[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_GLUTARYL__45__COA_c" id="M_GLUTARYL__45__COA_c" name="glutaryl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C26H37N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 876.597</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CCCC([O-])=O</p>
            <p>inchikey: SYKWLIJQEHRDNH-CKRMAKSASA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GLUTARYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C26H42N7O19P3S/c1-26(2,21(39)24(40)29-7-6-15(34)28-8-9-56-17(37)5-3-4-16(35)36)11-49-55(46,47)52-54(44,45)48-10-14-20(51-53(41,42)43)19(38)25(50-14)33-13-32-18-22(27)30-12-31-23(18)33/h12-14,19-21,25,38-39H,3-11H2,1-2H3,(H,28,34)(H,29,40)(H,35,36)(H,44,45)(H,46,47)(H2,27,30,31)(H2,41,42,43)/p-5/t14-,19-,20-,21+,25-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2K__45__ADIPATE_c" id="M_2K__45__ADIPATE_c" name="2-oxoadipate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H6O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 158.1099</p>
            <p>smiles: [O-]C(=O)CCCC(=O)C([O-])=O</p>
            <p>inchikey: FGSBNBBHOZHUBO-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2K__45__ADIPATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H8O5/c7-4(6(10)11)2-1-3-5(8)9/h1-3H2,(H,8,9)(H,10,11)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_P__45__AMINO__45__BENZOATE_c" id="M_P__45__AMINO__45__BENZOATE_c" name="4-aminobenzoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H6NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 136.1286</p>
            <p>smiles: Nc1ccc(cc1)C([O-])=O</p>
            <p>inchikey: ALYNCZNDIQEVRV-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_P__45__AMINO__45__BENZOATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H7NO2/c8-6-3-1-5(2-4-6)7(9)10/h1-4H,8H2,(H,9,10)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_4__45__AMINO__45__4__45__DEOXYCHORISMATE_c" id="M_4__45__AMINO__45__4__45__DEOXYCHORISMATE_c" name="4-amino-4-deoxychorismate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H10NO5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 224.1906</p>
            <p>smiles: [NH3+][C@@H]1C=CC(=C[C@H]1OC(=C)C([O-])=O)C([O-])=O</p>
            <p>inchikey: OIUJHGOLFKDBSU-HTQZYQBOSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_4__45__AMINO__45__4__45__DEOXYCHORISMATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H11NO5/c1-5(9(12)13)16-8-4-6(10(14)15)2-3-7(8)11/h2-4,7-8H,1,11H2,(H,12,13)(H,14,15)/p-1/t7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DEOXYADENOSINE_c" id="M_DEOXYADENOSINE_c" name="2&apos;-deoxyadenosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 251.2419</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@H]1C[C@H](O)[C@@H](CO)O1</p>
            <p>inchikey: OLXZPDWKRNYJJZ-RRKCRQDMSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DEOXYADENOSINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H13N5O3/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(17)6(2-16)18-7/h3-7,16-17H,1-2H2,(H2,11,12,13)/t5-,6+,7+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DEOXYINOSINE_c" id="M_DEOXYINOSINE_c" name="2&apos;-deoxyinosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 252.2267</p>
            <p>smiles: OC[C@H]1O[C@H](C[C@@H]1O)n1cnc2c1nc[nH]c2=O</p>
            <p>inchikey: VGONTNSXDCQUGY-RRKCRQDMSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DEOXYINOSINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H12N4O4/c15-2-6-5(16)1-7(18-6)14-4-13-8-9(14)11-3-12-10(8)17/h3-7,15-16H,1-2H2,(H,11,12,17)/t5-,6+,7+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Sterols_c" id="M_Sterols_c" name="a sterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Cys2__45__Peroxiredoxin__45__Disulfide_c" id="M_Cys2__45__Peroxiredoxin__45__Disulfide_c" name="a [2-Cys peroxiredoxin] with a disulfide bond" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Sterol__45__3__45__beta__45__D__45__glucosides_c" id="M_Sterol__45__3__45__beta__45__D__45__glucosides_c" name="a sterol 3-&amp;beta;-D-glucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Reduced__45__Cys2__45__Peroxiredoxins_c" id="M_Reduced__45__Cys2__45__Peroxiredoxins_c" name="a [2-Cys peroxiredoxin] with reduced L-cysteine residues" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_OH_c" id="M_OH_c" name="OH-" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 18.0153</p>
            <p>smiles: [H]O[H]</p>
            <p>inchikey: XLYOFNOQVPJJNP-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OH_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O/h1H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2__45__3__45__4__45__Saturated__45__L__45__Phosphatidates_c" id="M_2__45__3__45__4__45__Saturated__45__L__45__Phosphatidates_c" name="a 2,3,4-saturated 1,2-diacyl-sn-glycerol 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H16N3O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 286.2618</p>
            <p>smiles: [NH3+][C@@H](CC([O-])=O)C(=O)NCC(=O)N1CCC[C@H]1C([O-])=O</p>
            <p>inchikey: POTCZYQVVNXUIG-BQBZGAKWSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2__45__3__45__4__45__Saturated__45__L__45__Phosphatidates_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C11H17N3O6/c12-6(4-9(16)17)10(18)13-5-8(15)14-3-1-2-7(14)11(19)20/h6-7H,1-5,12H2,(H,13,18)(H,16,17)(H,19,20)/p-1/t6-,7-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Alkyl__45__enyl__45__acyl__45__gly__45__P__45__EtOH__45__amines_c" id="M_Alkyl__45__enyl__45__acyl__45__gly__45__P__45__EtOH__45__amines_c" name="a plasmenylethanolamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14NO7PR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]CCOP([O-])(=O)OC[C@@H](COC=C*)OC(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_1__45__Alkenylglycerophosphoethanolamines_c" id="M_1__45__Alkenylglycerophosphoethanolamines_c" name="a 1-O-(alk-1-enyl)-sn-glycero-3-phosphoethanolamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H15NO6PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@](O)(COC=C[*])COP([O-])(=O)OCC[NH3+]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_TRYPTAMINE_c" id="M_TRYPTAMINE_c" name="tryptamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C10H13N2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 161.2231</p>
            <p>smiles: [NH3+]CCc1c[nH]c2ccccc12</p>
            <p>inchikey: APJYDQYYACXCRM-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_TRYPTAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H12N2/c11-6-5-8-7-12-10-4-2-1-3-9(8)10/h1-4,7,12H,5-6,11H2/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PLASMENYLCHOLINE_c" id="M_PLASMENYLCHOLINE_c" name="a plasmenylcholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H20NO7PR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[N+](C)(C)CCOP([O-])(=O)OC[C@@H](CO\C=C\[*])OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CDP__45__2__45__3__45__4__45__Saturated__45__Diacylglycerols_c" id="M_CDP__45__2__45__3__45__4__45__Saturated__45__Diacylglycerols_c" name="a CDP-2,3,4-saturated-diacylglycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_SECOLOGANIN__45__CPD_c" id="M_SECOLOGANIN__45__CPD_c" name="secologanin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H24O10">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 388.3665</p>
            <p>smiles: COC(=O)C1=CO[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](C=C)[C@@H]1CC=O</p>
            <p>inchikey: CSKKDSFETGLMSB-NRZPKYKESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SECOLOGANIN__45__CPD_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C17H24O10/c1-3-8-9(4-5-18)10(15(23)24-2)7-25-16(8)27-17-14(22)13(21)12(20)11(6-19)26-17/h3,5,7-9,11-14,16-17,19-22H,1,4,6H2,2H3/t8-,9+,11-,12-,13+,14-,16+,17+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_STRICTOSIDINE_c" id="M_STRICTOSIDINE_c" name="3-&amp;alpha;(S)-strictosidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C27H35N2O9">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 531.5743</p>
            <p>smiles: [H][C@@]1(C[C@H]2[C@@H](C=C)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)OC=C2C(=O)OC)[NH2+]CCc2c1[nH]c1ccccc21</p>
            <p>inchikey: XBAMJZTXGWPTRM-NTXHKPOFSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_STRICTOSIDINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C27H34N2O9/c1-3-13-16(10-19-21-15(8-9-28-19)14-6-4-5-7-18(14)29-21)17(25(34)35-2)12-36-26(13)38-27-24(33)23(32)22(31)20(11-30)37-27/h3-7,12-13,16,19-20,22-24,26-33H,1,8-11H2,2H3/p+1/t13-,16+,19+,20-,22-,23+,24-,26+,27+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__563_c" id="M_CPD__45__563_c" name="a 1-(1-alkenyl)-sn-glycero-3-phosphocholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H21NO6PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[N+](C)(C)CCOP([O-])(=O)OC[C@H](O)CO\C=C\[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__13534_c" id="M_CPD__45__13534_c" name="3-oxopentanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H38N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 861.605</p>
            <p>smiles: CCC(=O)CC(=O)SCC[NH+]=C([O-])CC[NH+]=C([O-])C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1OC(C(O)C1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: WIOQNWTZBOQTEU-UHFFFAOYSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__13534_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C26H42N7O18P3S/c1-4-14(34)9-17(36)55-8-7-28-16(35)5-6-29-24(39)21(38)26(2,3)11-48-54(45,46)51-53(43,44)47-10-15-20(50-52(40,41)42)19(37)25(49-15)33-13-32-18-22(27)30-12-31-23(18)33/h12-13,15,19-21,25,37-38H,4-11H2,1-3H3,(H,28,35)(H,29,39)(H,43,44)(H,45,46)(H2,27,30,31)(H2,40,41,42)/p-4"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
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      <species metaid="M_ALPHA__45__TOCOPHEROL_c" id="M_ALPHA__45__TOCOPHEROL_c" name="&amp;alpha;-tocopherol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H50O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 430.7061</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC[C@]1(C)CCc2c(C)c(O)c(C)c(C)c2O1</p>
            <p>inchikey: GVJHHUAWPYXKBD-IEOSBIPESA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_ALPHA__45__TOCOPHEROL_c">
              <bqbiol:isVersionOf>
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            </rdf:Description>
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        </annotation>
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      <species metaid="M_HCN_c" id="M_HCN_c" name="hydrogen cyanide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CHN">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 27.0253</p>
            <p>smiles: C#N</p>
            <p>inchikey: LELOWRISYMNNSU-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HCN_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CHN/c1-2/h1H"/>
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      <species metaid="M_CPD__45__13533_c" id="M_CPD__45__13533_c" name="(3R)-3-hydroxypentanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H40N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 863.62</p>
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            <p>inchikey: YYGYPCRWZMLSGK-ORUMCERNSA-J</p>
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        <annotation>
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      <species metaid="M_CPD__45__69_c" id="M_CPD__45__69_c" name="cyanate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CNO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 42.0173</p>
            <p>smiles: [O-]C#N</p>
            <p>inchikey: XLJMAIOERFSOGZ-UHFFFAOYSA-M</p>
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        </notes>
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      <species metaid="M_BUTYRYL__45__COA_c" id="M_BUTYRYL__45__COA_c" name="butanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H38N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 833.594</p>
            <p>smiles: CCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: CRFNGMNYKDXRTN-CITAKDKDSA-J</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BUTYRYL__45__COA_c">
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      <species metaid="M_K__45__HEXANOYL__45__COA_c" id="M_K__45__HEXANOYL__45__COA_c" name="3-oxohexanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C27H40N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 875.631</p>
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        </notes>
        <annotation>
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      <species metaid="M_CPD__45__19171_c" id="M_CPD__45__19171_c" name="(S)-3-hydroxy-(9Z)-octadecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H64N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1043.95</p>
            <p>smiles: CCCCCCCC\C=C/CCCCC[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: LHAYYTCFPMUQNR-DFXYPYGHSA-J</p>
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        </notes>
        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1025.935</p>
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      <species metaid="M_ITP_c" id="M_ITP_c" name="ITP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O14P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 504.1362</p>
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            <p>inchikey: HAEJPQIATWHALX-KQYNXXCUSA-J</p>
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            <rdf:Description rdf:about="#M_ITP_c">
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      <species metaid="M_P__45__HYDROXY__45__PHENYLPYRUVATE_c" id="M_P__45__HYDROXY__45__PHENYLPYRUVATE_c" name="3-(4-hydroxyphenyl)pyruvate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H7O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 179.15</p>
            <p>smiles: Oc1ccc(CC(=O)C([O-])=O)cc1</p>
            <p>inchikey: KKADPXVIOXHVKN-UHFFFAOYSA-M</p>
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            <rdf:Description rdf:about="#M_P__45__HYDROXY__45__PHENYLPYRUVATE_c">
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      <species metaid="M_PHOSPHORIBOSYL__45__FORMIMINO__45__AICAR__45__P_c" id="M_PHOSPHORIBOSYL__45__FORMIMINO__45__AICAR__45__P_c" name="1-(5-phospho-&amp;beta;-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C15H21N5O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 573.3015</p>
            <p>smiles: NC(=O)c1ncn([C@@H]2O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]2O)c1\N=C\N[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: QOUSHGMTBIIAHR-KEOHHSTQSA-J</p>
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        </annotation>
      </species>
      <species metaid="M_LINOLEIC_ACID_c" id="M_LINOLEIC_ACID_c" name="linoleate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H31O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 279.4381</p>
            <p>smiles: CCCCC\C=C/C\C=C/CCCCCCCC([O-])=O</p>
            <p>inchikey: OYHQOLUKZRVURQ-HZJYTTRNSA-M</p>
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            <rdf:Description rdf:about="#M_LINOLEIC_ACID_c">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1025.935</p>
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      <species metaid="M_5__45__METHYL__45__THF_c" id="M_5__45__METHYL__45__THF_c" name="5-METHYL-THF" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C20H23N7O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 457.441</p>
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            <p>inchikey: ZNOVTXRBGFNYRX-STQMWFEESA-L</p>
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      <species metaid="M_Long__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" id="M_Long__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" name="a long-chain 2,3,4-saturated fatty acyl CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_HOMOGENTISATE_c" id="M_HOMOGENTISATE_c" name="homogentisate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 167.1393</p>
            <p>smiles: Oc1ccc(O)c(CC([O-])=O)c1</p>
            <p>inchikey: IGMNYECMUMZDDF-UHFFFAOYSA-M</p>
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        </notes>
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            <rdf:Description rdf:about="#M_HOMOGENTISATE_c">
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      <species metaid="M_4__45__MALEYL__45__ACETOACETATE_c" id="M_4__45__MALEYL__45__ACETOACETATE_c" name="4-maleyl-acetoacetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C8H6O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 198.1307</p>
            <p>smiles: [O-]C(=O)CC(=O)CC(=O)\C=C/C([O-])=O</p>
            <p>inchikey: GACSIVHAIFQKTC-UPHRSURJSA-L</p>
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        </notes>
        <annotation>
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              <bqbiol:isVersionOf>
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      <species metaid="M_Long__45__Chain__45__3S__45__Hydroxyacyl__45__CoAs_c" id="M_Long__45__Chain__45__3S__45__Hydroxyacyl__45__CoAs_c" name="a long-chain (3S)-3-hydroxyacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H37N7O18P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C[C@@H](O)C[*]</p>
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        </notes>
      </species>
      <species metaid="M_Proteins__45__L__45__Threonines_c" id="M_Proteins__45__L__45__Threonines_c" name="a [protein]-L-threonine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8N2O3R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DAMP_c" id="M_DAMP_c" name="dAMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 329.207</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@H]1C[C@H](O)[C@@H](COP([O-])([O-])=O)O1</p>
            <p>inchikey: KHWCHTKSEGGWEX-RRKCRQDMSA-L</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_DAMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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      <species metaid="M_Protein__45__Phosphothreonines_c" id="M_Protein__45__Phosphothreonines_c" name="a [protein] L-threonine phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__731_c" id="M_CPD__45__731_c" name="(+)-7-epi-jasmonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H17O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 209.2621</p>
            <p>smiles: CC\C=C/C[C@H]1[C@@H](CC([O-])=O)CCC1=O</p>
            <p>inchikey: ZNJFBWYDHIGLCU-QKMQQOOLSA-M</p>
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      <species metaid="M_CPD__45__10546_c" id="M_CPD__45__10546_c" name="methyl (indol-3-yl)acetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H11NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 189.2105</p>
            <p>smiles: COC(=O)Cc1c[nH]c2ccccc12</p>
            <p>inchikey: KTHADMDGDNYQRX-UHFFFAOYSA-N</p>
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        </notes>
        <annotation>
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      <species metaid="M_Farnesylated__45__CAAX__45__proteins_c" id="M_Farnesylated__45__CAAX__45__proteins_c" name="a farnesylated protein that ends with a CaaX sequence" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__21340_c" id="M_CPD__45__21340_c" name="all-trans-nonaprenyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_2__45__METHYL__45__BUTYRYL__45__COA_c" id="M_2__45__METHYL__45__BUTYRYL__45__COA_c" name="2-methylbutanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H40N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 847.621</p>
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            <p>inchikey: LYNVNYDEQMMNMZ-XGXNYEOVSA-J</p>
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      <species metaid="M_GERANYL__45__PP_c" id="M_GERANYL__45__PP_c" name="geranyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H17O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 311.1869</p>
            <p>smiles: CC(C)=CCC\C(C)=C\COP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: GVVPGTZRZFNKDS-JXMROGBWSA-K</p>
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            <rdf:Description rdf:about="#M_GERANYL__45__PP_c">
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      <species metaid="M_PROTOHEME_e" id="M_PROTOHEME_e" name="protoheme" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C34H30FeN4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 614.472</p>
            <p>smiles: CC1=C(CCC([O-])=O)C2=[N+]3C1=Cc1c(C)c(C=C)c4C=C5C(C)=C(C=C)C6=[N+]5[Fe--]3(n14)n1c(=C6)c(C)c(CCC([O-])=O)c1=C2</p>
            <p>inchikey: KABFMIBPWCXCRK-RGGAHWMASA-J</p>
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      <species metaid="M_Unspecified__45__Degradation__45__Products_c" id="M_Unspecified__45__Degradation__45__Products_c" name="[unspecified degradation products]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Protein__45__L__45__methionine__45__S__45__S__45__oxides_c" id="M_Protein__45__L__45__methionine__45__S__45__S__45__oxides_c" name="a protein-L-methionine-(S)-S-oxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10N2O3R2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__320_c" id="M_CPD__45__320_c" name="aci-nitroethane" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 75.0666</p>
            <p>smiles: CC[N+]([O-])=O</p>
            <p>inchikey: MCSAJNNLRCFZED-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_DIHYDROSIROHYDROCHLORIN_c" id="M_DIHYDROSIROHYDROCHLORIN_c" name="precorrin-2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-7" fbc:chemicalFormula="C42H41N4O16">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 857.796</p>
            <p>smiles: C[C@]1(CC([O-])=O)[C@H](CCC([O-])=O)\C2=C\c3[nH]c(Cc4[nH]c(\C=C5/N=C(/C=C1\[NH2+]2)[C@@H](CCC([O-])=O)[C@]5(C)CC([O-])=O)c(CC([O-])=O)c4CCC([O-])=O)c(CCC([O-])=O)c3CC([O-])=O</p>
            <p>inchikey: OQIIYZQTTMKFAU-ZNLOQLQNSA-G</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)CCC[*]</p>
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        </notes>
      </species>
      <species metaid="M_CPD__45__9038_c" id="M_CPD__45__9038_c" name="precorrin-1" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-8" fbc:chemicalFormula="C41H38N4O16">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 842.762</p>
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            <p>inchikey: CJLVUWULFKHGFB-NZCAJUPMSA-F</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 393.4338</p>
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            <p>inchikey: UELBXEKQONEDKM-IRXDYDNUSA-K</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 315.4686</p>
            <p>smiles: CCCCCCCC[C@H](O)[C@@H](O)CCCCCCCC([O-])=O</p>
            <p>inchikey: VACHUYIREGFMSP-IRXDYDNUSA-M</p>
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        </notes>
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      <species metaid="M_CPD__45__8999_c" id="M_CPD__45__8999_c" name="5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H9O6PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 240.172</p>
            <p>smiles: CSCCC(=O)C(=O)COP([O-])([O-])=O</p>
            <p>inchikey: HKEAOVFNWRDVAJ-UHFFFAOYSA-L</p>
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      <species metaid="M_CPD__45__85_c" id="M_CPD__45__85_c" name="1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 162.207</p>
            <p>smiles: CSCCC(=O)C(\O)=C\O</p>
            <p>inchikey: CILXJJLQPTUUSS-XQRVVYSFSA-N</p>
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        </notes>
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      <species metaid="M_INOSINE_c" id="M_INOSINE_c" name="inosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 268.2261</p>
            <p>smiles: OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cnc2c(O)ncnc12</p>
            <p>inchikey: UGQMRVRMYYASKQ-KQYNXXCUSA-N</p>
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            <rdf:Description rdf:about="#M_INOSINE_c">
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      <species metaid="M_Oligonucleotides_c" id="M_Oligonucleotides_c" name="a double-stranded oligonucleotide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_PANTETHEINE__45__P_c" id="M_PANTETHEINE__45__P_c" name="4&apos;-phosphopantetheine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C11H21N2O7PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 356.333</p>
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      <species metaid="M_apo__45__ACP_c" id="M_apo__45__ACP_c" name="apo-ACP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_OH__45__HEXANOYL__45__COA_c" id="M_OH__45__HEXANOYL__45__COA_c" name="(S)-3-hydroxyhexanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C27H42N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 877.647</p>
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      <species metaid="M_CPD__45__19169_c" id="M_CPD__45__19169_c" name="3-oxo-(9Z)-octadecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H62N7O18P3S">
        <notes>
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            <p>mass: 1041.934</p>
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            <p>inchikey: AVEYYKDEKGJVBU-BPMMELMSSA-J</p>
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      <species metaid="M_CPD0__45__2121_c" id="M_CPD0__45__2121_c" name="trans-hex-2-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C27H40N7O17P3S">
        <notes>
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            <p>mass: 859.632</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 999.897</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 997.882</p>
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        <notes>
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            <p>mass: 1015.897</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 157.1047</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 155.0889</p>
            <p>smiles: [O-]C(=O)c1cc(=O)[nH]c(=O)[nH]1</p>
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      <species metaid="M_All__45__trans__45__Retinyl__45__Esters_c" id="M_All__45__trans__45__Retinyl__45__Esters_c" name="an all-trans-retinyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H29O2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C\C(=C/COC([*])=O)\C=C\C=C(/C)\C=C\C1=C(C)CCCC1(C)C</p>
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        </notes>
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      <species metaid="M_CPD__45__13524_c" id="M_CPD__45__13524_c" name="all-trans-retinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 286.4516</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__19167_c" id="M_CPD__45__19167_c" name="3-oxo-(7Z)-hexadecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H58N7O18P3S">
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            <p>mass: 1013.881</p>
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      <species metaid="M_Menaquinones_c" id="M_Menaquinones_c" name="a menaquinone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_2__45__LYSOPHOSPHATIDYLETHANOLAMINES_c" id="M_2__45__LYSOPHOSPHATIDYLETHANOLAMINES_c" name="a 1-acyl,2-lyso-phosphatidylethanolamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_PHOSPHORIBULOSYL__45__FORMIMINO__45__AICAR__45__P_c" id="M_PHOSPHORIBULOSYL__45__FORMIMINO__45__AICAR__45__P_c" name="phosphoribulosylformimino-AICAR-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C15H21N5O15P2">
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 573.3015</p>
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      <species metaid="M_Ox__45__Glutaredoxins_c" id="M_Ox__45__Glutaredoxins_c" name="an oxidized glutaredoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
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      <species metaid="M_Red__45__Glutaredoxins_c" id="M_Red__45__Glutaredoxins_c" name="a reduced glutaredoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Charged__45__PRO__45__tRNAs_c" id="M_Charged__45__PRO__45__tRNAs_c" name="an L-prolyl-[tRNAPro]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_PRO__45__tRNAs_c" id="M_PRO__45__tRNAs_c" name="a tRNAPro" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="RH">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_D__45__METHYL__45__MALONYL__45__COA_c" id="M_D__45__METHYL__45__MALONYL__45__COA_c" name="(S)-methylmalonyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C25H35N7O19P3S">
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            <p>mass: 862.57</p>
            <p>smiles: C[C@@H](C([O-])=O)C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: MZFOKIKEPGUZEN-IBNUZSNCSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_D__45__METHYL__45__MALONYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__13118_c" id="M_CPD__45__13118_c" name="GDP-&amp;beta;-L-fucose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 587.3269</p>
            <p>smiles: C[C@@H]1O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c2nc(N)[nH]c3=O)[C@@H](O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: LQEBEXMHBLQMDB-JGQUBWHWSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__13118_c">
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                </rdf:Bag>
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            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__8594_c" id="M_CPD__45__8594_c" name="a Lewis x epitope" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H34NO14R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[C@@H]1O[C@@H](O[C@@H]2[C@@H](NC(C)=O)C(-*)O[C@H](CO)[C@H]2O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@H](O)[C@@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Cerebrosides_c" id="M_Cerebrosides_c" name="a cerebroside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_GALACTOSYLCERAMIDE__45__SULFATE_c" id="M_GALACTOSYLCERAMIDE__45__SULFATE_c" name="a sulfatide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C25H45NO11SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCC\C=C\[C@@H](O)[C@H](CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](OS([O-])(=O)=O)[C@H]1O)NC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_R2__45__2OH__45__Straight__45__Chain__45__234__45__Sat__45__FA__45__CoA_c" id="M_R2__45__2OH__45__Straight__45__Chain__45__234__45__Sat__45__FA__45__CoA_c" name="a (R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acyl CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H37N7O18P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)[C@H](O)CC[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_DGMP_c" id="M_DGMP_c" name="dGMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 345.2064</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@H]1C[C@H](O)[C@@H](COP([O-])([O-])=O)O1</p>
            <p>inchikey: LTFMZDNNPPEQNG-KVQBGUIXSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DGMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/p-2/t4-,5+,6+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NMNH_c" id="M_NMNH_c" name="reduced &amp;beta;-nicotinamide D-ribonucleotide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C11H15N2O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 334.2203</p>
            <p>smiles: NC(=O)C1=CN(C=CC1)[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XQHMUSRSLNRVGA-TURQNECASA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NMNH_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C11H17N2O8P/c12-10(16)6-2-1-3-13(4-6)11-9(15)8(14)7(21-11)5-20-22(17,18)19/h1,3-4,7-9,11,14-15H,2,5H2,(H2,12,16)(H2,17,18,19)/p-2/t7-,8-,9-,11-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ENOL__45__PHENYLPYRUVATE_c" id="M_ENOL__45__PHENYLPYRUVATE_c" name="enol-phenylpyruvate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H7O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 163.1506</p>
            <p>smiles: OC(=Cc1ccccc1)C([O-])=O</p>
            <p>inchikey: DEDGUGJNLNLJSR-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ENOL__45__PHENYLPYRUVATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H8O3/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-6,10H,(H,11,12)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__644_c" id="M_CPD__45__644_c" name="L-threo-3-phenylserine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 181.1885</p>
            <p>smiles: [NH3+][C@@H]([C@@H](O)c1ccccc1)C([O-])=O</p>
            <p>inchikey: VHVGNTVUSQUXPS-YUMQZZPRSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__644_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H11NO3/c10-7(9(12)13)8(11)6-4-2-1-3-5-6/h1-5,7-8,11H,10H2,(H,12,13)/t7-,8-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BENZALDEHYDE_c" id="M_BENZALDEHYDE_c" name="benzaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H6O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 106.1219</p>
            <p>smiles: [H]C(=O)c1ccccc1</p>
            <p>inchikey: HUMNYLRZRPPJDN-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BENZALDEHYDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H6O/c8-6-7-4-2-1-3-5-7/h1-6H"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__6__45__P_c" id="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__6__45__P_c" name="N-acetyl-D-glucosamine 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C8H14NO9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 299.1729</p>
            <p>smiles: CC(=O)N[C@H]1C(O)O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: BRGMHAYQAZFZDJ-RTRLPJTCSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__6__45__P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H16NO9P/c1-3(10)9-5-7(12)6(11)4(18-8(5)13)2-17-19(14,15)16/h4-8,11-13H,2H2,1H3,(H,9,10)(H2,14,15,16)/p-2/t4-,5-,6-,7-,8?/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD0__45__2232_c" id="M_CPD0__45__2232_c" name="(S)-3-hydroxyhexadecanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H62N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1017.913</p>
            <p>smiles: CCCCCCCCCCCCC[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: DEHLMTDDPWDRDR-BCIKBWLNSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD0__45__2232_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C37H66N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-25(45)20-28(47)66-19-18-39-27(46)16-17-40-35(50)32(49)37(2,3)22-59-65(56,57)62-64(54,55)58-21-26-31(61-63(51,52)53)30(48)36(60-26)44-24-43-29-33(38)41-23-42-34(29)44/h23-26,30-32,36,45,48-49H,4-22H2,1-3H3,(H,39,46)(H,40,50)(H,54,55)(H,56,57)(H2,38,41,42)(H2,51,52,53)/p-4/t25-,26+,30+,31+,32-,36+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DEOXYCYTIDINE_c" id="M_DEOXYCYTIDINE_c" name="2&apos;-deoxycytidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N3O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 227.2172</p>
            <p>smiles: Nc1ccn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1</p>
            <p>inchikey: CKTSBUTUHBMZGZ-SHYZEUOFSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DEOXYCYTIDINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DEOXYURIDINE_c" id="M_DEOXYURIDINE_c" name="2&apos;-deoxyuridine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N2O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.202</p>
            <p>smiles: OC[C@H]1O[C@H](C[C@@H]1O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: MXHRCPNRJAMMIM-SHYZEUOFSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DEOXYURIDINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H12N2O5/c12-4-6-5(13)3-8(16-6)11-2-1-7(14)10-9(11)15/h1-2,5-6,8,12-13H,3-4H2,(H,10,14,15)/t5-,6+,8+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD0__45__2117_c" id="M_CPD0__45__2117_c" name="(2E)-hexadecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H60N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 999.897</p>
            <p>smiles: CCCCCCCCCCCCC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: JUPAQFRKPHPXLD-MSHHSVQMSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD0__45__2117_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C37H64N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-28(46)65-21-20-39-27(45)18-19-40-35(49)32(48)37(2,3)23-58-64(55,56)61-63(53,54)57-22-26-31(60-62(50,51)52)30(47)36(59-26)44-25-43-29-33(38)41-24-42-34(29)44/h16-17,24-26,30-32,36,47-48H,4-15,18-23H2,1-3H3,(H,39,45)(H,40,49)(H,53,54)(H,55,56)(H2,38,41,42)(H2,50,51,52)/p-4/b17-16+/t26-,30-,31-,32+,36-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CYTIDINE_c" id="M_CYTIDINE_c" name="cytidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N3O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 243.2166</p>
            <p>smiles: Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1</p>
            <p>inchikey: UHDGCWIWMRVCDJ-XVFCMESISA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CYTIDINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)/t4-,6-,7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_URIDINE_c" id="M_URIDINE_c" name="uridine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N2O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 244.2014</p>
            <p>smiles: OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: DRTQHJPVMGBUCF-XVFCMESISA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_URIDINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H12N2O6/c12-3-4-6(14)7(15)8(17-4)11-2-1-5(13)10-9(11)16/h1-2,4,6-8,12,14-15H,3H2,(H,10,13,16)/t4-,6-,7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15568_c" id="M_CPD__45__15568_c" name="2E)-tetradec-2-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H56N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 971.844</p>
            <p>smiles: CCCCCCCCCCC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: MBCVYCOKMMMWLX-YYMFEJJQSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15568_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C35H60N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-26(44)63-19-18-37-25(43)16-17-38-33(47)30(46)35(2,3)21-56-62(53,54)59-61(51,52)55-20-24-29(58-60(48,49)50)28(45)34(57-24)42-23-41-27-31(36)39-22-40-32(27)42/h14-15,22-24,28-30,34,45-46H,4-13,16-21H2,1-3H3,(H,37,43)(H,38,47)(H,51,52)(H,53,54)(H2,36,39,40)(H2,48,49,50)/p-4/b15-14+/t24-,28-,29-,30+,34-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD1G__45__1354_c" id="M_CPD1G__45__1354_c" name="trehalose-trans-keto-mono-mycolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C98H188O14">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1590.5329</p>
            <p>smiles: [H]C(C)(CCCCCCCCCCCCCCCCC)C(=O)CCCCCCCCCCCCCCCCC([H])(C)C1([H])CC1([H])CCCCCCCCCCCCCCCC[C@@]([H])(O)C([H])(CCCCCCCCCCCCCCCCCCCCCCCCCC)C(=O)OC[C@@]1([H])O[C@]([H])(O[C@@]2([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O)[C@@]2([H])O)[C@]([H])(O)[C@@]([H])(O)[C@]1([H])O</p>
            <p>inchikey: ZHIKIEYTXXJMOG-UQWWGAJESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD1G__45__1354_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C98H188O14/c1-5-7-9-11-13-15-17-19-21-22-23-24-25-26-27-28-29-31-39-45-51-57-63-69-75-84(96(108)109-80-89-91(103)93(105)95(107)98(111-89)112-97-94(106)92(104)90(102)88(79-99)110-97)87(101)77-71-65-59-53-47-41-35-33-38-44-50-56-62-68-74-83-78-85(83)81(3)72-66-60-54-48-42-36-32-34-40-46-52-58-64-70-76-86(100)82(4)73-67-61-55-49-43-37-30-20-18-16-14-12-10-8-6-2/h81-85,87-95,97-99,101-107H,5-80H2,1-4H3/t81?,82?,83?,84?,85?,87-,88-,89-,90-,91-,92+,93+,94-,95-,97-,98-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Odd__45__Saturated__45__Fatty__45__Acyl__45__CoA_c" id="M_Odd__45__Saturated__45__Fatty__45__Acyl__45__CoA_c" name="an odd numbered straight chain 2,3,4-saturated fatty acyl CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C24H35N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CC[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_R__45__3__45__hydroxybehenoyl__45__ACPs_c" id="M_R__45__3__45__hydroxybehenoyl__45__ACPs_c" name="a (3R)-3-hydroxydocosanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__10809_c" id="M_CPD__45__10809_c" name="2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H16N5O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 353.2269</p>
            <p>smiles: Nc1nc(NC[C@H](O)[C@H](O)[C@H](O)COP([O-])([O-])=O)c(N)c(=O)[nH]1</p>
            <p>inchikey: ACIVVGBVOVHFPQ-RPDRRWSUSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__10809_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H18N5O8P/c10-5-7(13-9(11)14-8(5)18)12-1-3(15)6(17)4(16)2-22-23(19,20)21/h3-4,6,15-17H,1-2,10H2,(H2,19,20,21)(H4,11,12,13,14,18)/p-2/t3-,4+,6-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__1086_c" id="M_CPD__45__1086_c" name="5-amino-6-(5-phospho-D-ribitylamino)uracil" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H15N4O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 354.2117</p>
            <p>smiles: Nc1c(NC[C@H](O)[C@H](O)[C@H](O)COP([O-])([O-])=O)[nH]c(=O)[nH]c1=O</p>
            <p>inchikey: RQRINYISXYAZKL-RPDRRWSUSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__1086_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H17N4O9P/c10-5-7(12-9(18)13-8(5)17)11-1-3(14)6(16)4(15)2-22-23(19,20)21/h3-4,6,14-16H,1-2,10H2,(H2,19,20,21)(H3,11,12,13,17,18)/p-2/t3-,4+,6-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Lignoceroyl__45__ACPs_c" id="M_Lignoceroyl__45__ACPs_c" name="a lignoceroyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3__45__oxo__45__cerotoyl__45__ACPs_c" id="M_3__45__oxo__45__cerotoyl__45__ACPs_c" name="a 3-oxohexacosanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_GLYCEROL_c" id="M_GLYCEROL_c" name="glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 92.0938</p>
            <p>smiles: OCC(O)CO</p>
            <p>inchikey: PEDCQBHIVMGVHV-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GLYCEROL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GLYCOLLATE_c" id="M_GLYCOLLATE_c" name="glycolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2H3O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 75.044</p>
            <p>smiles: OCC([O-])=O</p>
            <p>inchikey: AEMRFAOFKBGASW-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GLYCOLLATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H4O3/c3-1-2(4)5/h3H,1H2,(H,4,5)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_R__45__3__45__hydroxycerotoyl__45__ACPs_c" id="M_R__45__3__45__hydroxycerotoyl__45__ACPs_c" name="a (3R)-3-hydroxyhexacosanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ARG_c" id="M_ARG_c" name="L-arginine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C6H15N4O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 175.2084</p>
            <p>smiles: NC(=[NH2+])NCCC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: ODKSFYDXXFIFQN-BYPYZUCNSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ARG_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)/p+1/t4-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Trans__45__D2__45__hexacos__45__2__45__enoyl__45__ACPs_c" id="M_Trans__45__D2__45__hexacos__45__2__45__enoyl__45__ACPs_c" name="a trans-hexacos-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_TYR_c" id="M_TYR_c" name="L-tyrosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 181.1885</p>
            <p>smiles: [NH3+][C@@H](Cc1ccc(O)cc1)C([O-])=O</p>
            <p>inchikey: OUYCCCASQSFEME-QMMMGPOBSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_TYR_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H11NO3/c10-8(9(12)13)5-6-1-3-7(11)4-2-6/h1-4,8,11H,5,10H2,(H,12,13)/t8-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GLYCERATE_c" id="M_GLYCERATE_c" name="GLYCERATE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H5O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 105.0699</p>
            <p>smiles: OC[C@@H](O)C([O-])=O</p>
            <p>inchikey: RBNPOMFGQQGHHO-UWTATZPHSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GLYCERATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H6O4/c4-1-2(5)3(6)7/h2,4-5H,1H2,(H,6,7)/p-1/t2-/m1/s1"/>
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              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_HIS_c" id="M_HIS_c" name="L-histidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 155.1546</p>
            <p>smiles: [NH3+][C@@H](Cc1c[nH]cn1)C([O-])=O</p>
            <p>inchikey: HNDVDQJCIGZPNO-YFKPBYRVSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HIS_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H9N3O2/c7-5(6(10)11)1-4-2-8-3-9-4/h2-3,5H,1,7H2,(H,8,9)(H,10,11)/t5-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__KETOACYL__45__COA_c" id="M_3__45__KETOACYL__45__COA_c" name="a 2,3,4-saturated 3-oxoacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C24H33N7O18P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_FORMATE_c" id="M_FORMATE_c" name="formate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CHO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 45.018</p>
            <p>smiles: [H]C([O-])=O</p>
            <p>inchikey: BDAGIHXWWSANSR-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_FORMATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CH2O2/c2-1-3/h1H,(H,2,3)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD1F__45__131_c" id="M_CPD1F__45__131_c" name="antheraxanthin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 584.8708</p>
            <p>smiles: C\C(\C=C\C=C(/C)\C=C\C1=C(C)C[C@@H](O)CC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/[C@@]12O[C@]1(C)C[C@@H](O)CC2(C)C</p>
            <p>inchikey: OFNSUWBAQRCHAV-OYQUVCAXSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD1F__45__131_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_HISTIDINOL_c" id="M_HISTIDINOL_c" name="histidinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C6H12N3O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 142.1784</p>
            <p>smiles: [NH3+][C@H](CO)Cc1c[nH]cn1</p>
            <p>inchikey: ZQISRDCJNBUVMM-YFKPBYRVSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HISTIDINOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H11N3O/c7-5(3-10)1-6-2-8-4-9-6/h2,4-5,10H,1,3,7H2,(H,8,9)/p+1/t5-/m0/s1"/>
                </rdf:Bag>
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            </rdf:Description>
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      </species>
      <species metaid="M_CPD__45__7414_c" id="M_CPD__45__7414_c" name="&amp;epsilon;-carotene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 536.8726</p>
            <p>smiles: C\C(\C=C\C=C(/C)\C=C\C1C(C)=CCCC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1C(C)=CCCC1(C)C</p>
            <p>inchikey: QABFXOMOOYWZLZ-JLTXGRSLSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__7414_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
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        </annotation>
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      <species metaid="M_CPD1F__45__115_c" id="M_CPD1F__45__115_c" name="&amp;delta;-carotene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 536.8726</p>
            <p>smiles: CC(C)=CCC\C(C)=C\C=C\C(\C)=C\C=C\C(\C)=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\C1C(C)=CCCC1(C)C</p>
            <p>inchikey: WGIYGODPCLMGQH-BXOLYSJBSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD1F__45__115_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C40H56/c1-32(2)18-13-21-35(5)24-15-26-36(6)25-14-22-33(3)19-11-12-20-34(4)23-16-27-37(7)29-30-39-38(8)28-17-31-40(39,9)10/h11-12,14-16,18-20,22-30,39H,13,17,21,31H2,1-10H3/b12-11+,22-14+,23-16+,26-15+,30-29+,33-19+,34-20+,35-24+,36-25+,37-27+"/>
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              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_3__45__OXOPIMELOYL__45__COA_c" id="M_3__45__OXOPIMELOYL__45__COA_c" name="3-oxopimeloyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C28H39N7O20P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 918.633</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CC(=O)CCCC([O-])=O</p>
            <p>inchikey: KJXFOFKTZDJLMQ-UYRKPTJQSA-I</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__OXOPIMELOYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
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      </species>
      <species metaid="M_G3P_c" id="M_G3P_c" name="3-phospho-D-glycerate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C3H4O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 183.0351</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: OSJPPGNTCRNQQC-UWTATZPHSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_G3P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7O7P/c4-2(3(5)6)1-10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9)/p-3/t2-/m1/s1"/>
                </rdf:Bag>
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      </species>
      <species metaid="M_CPD__45__292_c" id="M_CPD__45__292_c" name="(2E)-hexadecenal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H30O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 238.4088</p>
            <p>smiles: [H]C(=O)\C=C\CCCCCCCCCCCCC</p>
            <p>inchikey: KLJFYXOVGVXZKT-CCEZHUSRSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__292_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_LYS2__45__peptidyl__45__carrier__45__protein_c" id="M_LYS2__45__peptidyl__45__carrier__45__protein_c" name="an apo-[LYS2 L-2-aminoadipyl-carrier-protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3__45__SULFINOALANINE_c" id="M_3__45__SULFINOALANINE_c" name="3-sulfino-L-alanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H6NO4S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 152.15</p>
            <p>smiles: [NH3+][C@@H](CS([O-])=O)C([O-])=O</p>
            <p>inchikey: ADVPTQAUNPRNPO-REOHCLBHSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__SULFINOALANINE_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO4S/c4-2(3(5)6)1-9(7)8/h2H,1,4H2,(H,5,6)(H,7,8)/p-1/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__SULFINYL__45__PYRUVATE_c" id="M_3__45__SULFINYL__45__PYRUVATE_c" name="3-sulfinopyruvate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H2O5S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.111</p>
            <p>smiles: [O-]C(=O)C(=O)CS([O-])=O</p>
            <p>inchikey: JXYLQEMXCAAMOL-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__SULFINYL__45__PYRUVATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Holo__45__LYS2__45__peptidyl__45__carrier__45__protein_c" id="M_Holo__45__LYS2__45__peptidyl__45__carrier__45__protein_c" name="a holo-[LYS2 L-2-aminoadipyl-carrier-protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__18085_c" id="M_CPD__45__18085_c" name="1,2-dihydro-&amp;beta;-NADP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C21H26N7O17P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 741.3913</p>
            <p>smiles: NC(=O)C1=CC=CN(C1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](OP([O-])([O-])=O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: SNZSFAQYVLPEBZ-NNYOXOHSSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              <bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_CPD__45__18238_c" id="M_CPD__45__18238_c" name="carboxyphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="CHO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 139.9899</p>
            <p>smiles: OP([O-])(=O)OC([O-])=O</p>
            <p>inchikey: LQQCGEGRINLHDP-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD1F__45__132_c" id="M_CPD1F__45__132_c" name="ent-kaur-16-en-19-oate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H29O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 301.4436</p>
            <p>smiles: [H][C@@]12CC[C@@H]3C[C@]1(CC3=C)CC[C@]1([H])[C@@](C)(CCC[C@@]21C)C([O-])=O</p>
            <p>inchikey: NIKHGUQULKYIGE-OTCXFQBHSA-M</p>
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        </notes>
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      <species metaid="M_CPD1F__45__136_c" id="M_CPD1F__45__136_c" name="ent-7&amp;alpha;-hydroxykaur-16-en-19-oate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H29O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 317.443</p>
            <p>smiles: [H][C@@]12CC[C@@H]3C[C@]1(CC3=C)[C@@H](O)C[C@]1([H])[C@@](C)(CCC[C@@]21C)C([O-])=O</p>
            <p>inchikey: KMLXVEXJZSTMBV-YDIYEOSVSA-M</p>
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        </notes>
        <annotation>
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      <species metaid="M_CAMP_c" id="M_CAMP_c" name="cyclic-AMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H11N5O6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 328.1986</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@@H]2COP([O-])(=O)O[C@H]2[C@H]1O</p>
            <p>inchikey: IVOMOUWHDPKRLL-KQYNXXCUSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CAMP_c">
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      <species metaid="M_BCCP__45__dimers_c" id="M_BCCP__45__dimers_c" name="BCCP-dimers" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_NN__45__DIMETHYLANILINE_c" id="M_NN__45__DIMETHYLANILINE_c" name="N,N-dimethylaniline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H11N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 121.1796</p>
            <p>smiles: CN(C)c1ccccc1</p>
            <p>inchikey: JLTDJTHDQAWBAV-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NN__45__DIMETHYLANILINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_NN__45__DIMETHYLANILINE__45__N__45__OXIDE_c" id="M_NN__45__DIMETHYLANILINE__45__N__45__OXIDE_c" name="N,N-dimethylaniline-N-oxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H11NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 137.179</p>
            <p>smiles: CN(C)(=O)c1ccccc1</p>
            <p>inchikey: LKQUDAOAMBKKQW-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_NN__45__DIMETHYLANILINE__45__N__45__OXIDE_c">
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        </annotation>
      </species>
      <species metaid="M_Carboxybiotin__45__BCCP_c" id="M_Carboxybiotin__45__BCCP_c" name="Carboxybiotin-BCCP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_IDP_c" id="M_IDP_c" name="IDP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H11N4O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 425.1637</p>
            <p>smiles: O[C@@H]1[C@@H](COP([O-])(=O)OP([O-])([O-])=O)O[C@H]([C@@H]1O)n1cnc2c1nc[nH]c2=O</p>
            <p>inchikey: JPXZQMKKFWMMGK-KQYNXXCUSA-K</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_IDP_c">
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                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD0__45__903_c" id="M_CPD0__45__903_c" name="N-ethylsuccinimide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 127.1412</p>
            <p>smiles: CCN1C(=O)CCC1=O</p>
            <p>inchikey: GHAZCVNUKKZTLG-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_N__45__ETHYLMALEIMIDE_c" id="M_N__45__ETHYLMALEIMIDE_c" name="N-ethylmaleimide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H7NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 125.1253</p>
            <p>smiles: CCN1C(=O)C=CC1=O</p>
            <p>inchikey: HDFGOPSGAURCEO-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_N__45__ETHYLMALEIMIDE_c">
              <bqbiol:isVersionOf>
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      <species metaid="M_TTP_c" id="M_TTP_c" name="dTTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H13N2O14P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 478.1387</p>
            <p>smiles: Cc1cn([C@H]2C[C@H](O)[C@@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)O2)c(=O)[nH]c1=O</p>
            <p>inchikey: NHVNXKFIZYSCEB-XLPZGREQSA-J</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_TTP_c">
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        </annotation>
      </species>
      <species metaid="M_Cytochromes__45__C__45__Reduced_e" id="M_Cytochromes__45__C__45__Reduced_e" name="a reduced c-type cytochrome" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Cytochromes__45__C__45__Oxidized_e" id="M_Cytochromes__45__C__45__Oxidized_e" name="an oxidized c-type cytochrome" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2__45__ACETO__45__LACTATE_c" id="M_2__45__ACETO__45__LACTATE_c" name="(S)-2-acetolactate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H7O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 131.1072</p>
            <p>smiles: CC(=O)[C@](C)(O)C([O-])=O</p>
            <p>inchikey: NMDWGEGFJUBKLB-YFKPBYRVSA-M</p>
          </body>
        </notes>
        <annotation>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__13357_c" id="M_CPD__45__13357_c" name="(2R)-2,3-dihydroxy-3-methylbutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H9O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 133.1231</p>
            <p>smiles: CC(C)(O)[C@@H](O)C([O-])=O</p>
            <p>inchikey: JTEYKUFKXGDTEU-VKHMYHEASA-M</p>
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        </notes>
        <annotation>
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      <species metaid="M_Oxidized__45__flavodoxins_c" id="M_Oxidized__45__flavodoxins_c" name="Oxidized-flavodoxins" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Reduced__45__flavodoxins_c" id="M_Reduced__45__flavodoxins_c" name="Reduced-flavodoxins" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_CPD__45__15979_c" id="M_CPD__45__15979_c" name="D-mannopyranose 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: OC1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: NBSCHQHZLSJFNQ-QTVWNMPRSA-L</p>
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        </notes>
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              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_MANNOSE__45__1P_c" id="M_MANNOSE__45__1P_c" name="&amp;alpha;-D-mannose 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: OC[C@H]1O[C@H](OP([O-])([O-])=O)[C@@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: HXXFSFRBOHSIMQ-RWOPYEJCSA-L</p>
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        </notes>
        <annotation>
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        </annotation>
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      <species metaid="M_C1_c" id="M_C1_c" name="UDP-N-acetyl-&amp;alpha;-D-muramoyl-L-alanyl-&amp;gamma;-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C41H61N9O28P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1189.9163</p>
            <p>smiles: C[C@@H](NC(=O)[C@@H](C)NC(=O)[C@H](CCC[C@@H]([NH3+])C([O-])=O)NC(=O)CC[C@@H](NC(=O)[C@H](C)NC(=O)[C@@H](C)O[C@H]1[C@H](O)[C@@H](CO)O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2ccc(=O)[nH]c2=O)[C@@H]1NC(C)=O)C([O-])=O)C([O-])=O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1713.0174</p>
            <p>smiles: C[C@@H](NC(=O)[C@@H](C)NC(=O)[C@H](CCC[C@@H]([NH3+])C([O-])=O)NC(=O)CC[C@@H](NC(=O)[C@H](C)NC(=O)[C@@H](C)O[C@H]1[C@H](O)[C@@H](CO)O[C@H](OP([O-])(=O)OP([O-])(=O)OC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(\C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C)[C@@H]1NC(C)=O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: PNWZQTONLRRPST-KLDRQJOASA-J</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 917.754</p>
            <p>smiles: CCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: CNKJPHSEFDPYDB-HSJNEKGZSA-J</p>
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        </notes>
        <annotation>
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        </annotation>
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      <species metaid="M_CPD0__45__2105_c" id="M_CPD0__45__2105_c" name="3-oxododecanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C33H52N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 959.791</p>
            <p>smiles: CCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: HQANBZHVWIDNQZ-GMHMEAMDSA-J</p>
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        </notes>
        <annotation>
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      <species metaid="M_L__45__ORNITHINE_c" id="M_L__45__ORNITHINE_c" name="L-ornithine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H13N2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 133.1684</p>
            <p>smiles: [NH3+]CCC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: AHLPHDHHMVZTML-BYPYZUCNSA-O</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_L__45__ORNITHINE_c">
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      <species metaid="M_HEXANOYL__45__COA_c" id="M_HEXANOYL__45__COA_c" name="hexanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C27H42N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 861.648</p>
            <p>smiles: CCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: OEXFMSFODMQEPE-HDRQGHTBSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
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        </annotation>
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      <species metaid="M_CPD0__45__2106_c" id="M_CPD0__45__2106_c" name="3-oxooctanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C29H44N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 903.684</p>
            <p>smiles: CCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: WPIVBCGRGVNDDT-CECATXLMSA-J</p>
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        </notes>
        <annotation>
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        </annotation>
      </species>
      <species metaid="M_S__45__2__45__Hydroxyacids1_c" id="M_S__45__2__45__Hydroxyacids1_c" name="an (S)-2-hydroxyarboxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2H2O3R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@@H]([*])C([O-])=O</p>
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        </notes>
      </species>
      <species metaid="M_2__45__Oxo__45__carboxylates_c" id="M_2__45__Oxo__45__carboxylates_c" name="a 2-oxo carboxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2O3R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_4__45__AMINO__45__BUTYRATE_c" id="M_4__45__AMINO__45__BUTYRATE_c" name="4-aminobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 103.1198</p>
            <p>smiles: [NH3+]CCCC([O-])=O</p>
            <p>inchikey: BTCSSZJGUNDROE-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_4__45__AMINO__45__BUTYRATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H9NO2/c5-3-1-2-4(6)7/h1-3,5H2,(H,6,7)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__1084_c" id="M_CPD__45__1084_c" name="perillyl aldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H14O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.2176</p>
            <p>smiles: [H]C(=O)C1=CCC(CC1)C(C)=C</p>
            <p>inchikey: RUMOYJJNUMEFDD-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__1084_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H14O/c1-8(2)10-5-3-9(7-11)4-6-10/h3,7,10H,1,4-6H2,2H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__12443_c" id="M_CPD__45__12443_c" name="perillate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H13O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 165.2096</p>
            <p>smiles: CC(=C)C1CCC(=CC1)C([O-])=O</p>
            <p>inchikey: CDSMSBUVCWHORP-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__12443_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H14O2/c1-7(2)8-3-5-9(6-4-8)10(11)12/h5,8H,1,3-4,6H2,2H3,(H,11,12)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_AMINO__45__OH__45__HYDROXYMETHYL__45__DIHYDROPTERIDINE_c" id="M_AMINO__45__OH__45__HYDROXYMETHYL__45__DIHYDROPTERIDINE_c" name="6-(hydroxymethyl)-7,8-dihydropterin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9N5O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 195.1787</p>
            <p>smiles: Nc1nc2NCC(CO)=Nc2c(=O)[nH]1</p>
            <p>inchikey: CQQNNQTXUGLUEV-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AMINO__45__OH__45__HYDROXYMETHYL__45__DIHYDROPTERIDINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H9N5O2/c8-7-11-5-4(6(14)12-7)10-3(2-13)1-9-5/h13H,1-2H2,(H4,8,9,11,12,14)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GLYCOLALDEHYDE_c" id="M_GLYCOLALDEHYDE_c" name="glycolaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 60.052</p>
            <p>smiles: [H]C(=O)CO</p>
            <p>inchikey: WGCNASOHLSPBMP-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GLYCOLALDEHYDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H4O2/c3-1-2-4/h1,4H,2H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIHYDRONEOPTERIN__45__P3_c" id="M_DIHYDRONEOPTERIN__45__P3_c" name="7,8-dihydroneopterin 3&apos;-triphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H12N5O13P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 491.1408</p>
            <p>smiles: Nc1nc2NCC(=Nc2c(=O)[nH]1)[C@H](O)[C@H](O)COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: DGGUVLXVLHAAGT-XINAWCOVSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIHYDRONEOPTERIN__45__P3_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H16N5O13P3/c10-9-13-7-5(8(17)14-9)12-3(1-11-7)6(16)4(15)2-25-29(21,22)27-30(23,24)26-28(18,19)20/h4,6,15-16H,1-2H2,(H,21,22)(H,23,24)(H2,18,19,20)(H4,10,11,13,14,17)/p-4/t4-,6+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIHYDROPTERIN__45__CH2OH__45__PP_c" id="M_DIHYDROPTERIN__45__CH2OH__45__PP_c" name="(7,8-dihydropterin-6-yl)methyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C7H8N5O8P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 352.1163</p>
            <p>smiles: Nc1nc2NCC(COP([O-])(=O)OP([O-])([O-])=O)=Nc2c(=O)[nH]1</p>
            <p>inchikey: FCQGJGLSOWZZON-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIHYDROPTERIN__45__CH2OH__45__PP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H11N5O8P2/c8-7-11-5-4(6(13)12-7)10-3(1-9-5)2-19-22(17,18)20-21(14,15)16/h1-2H2,(H,17,18)(H2,14,15,16)(H4,8,9,11,12,13)/p-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Cerotoyl__45__ACPs_c" id="M_Cerotoyl__45__ACPs_c" name="a cerotoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_BCAA__45__dehydrogenase__45__lipoyl_c" id="M_BCAA__45__dehydrogenase__45__lipoyl_c" name="an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13OS2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_BCAA__45__dehydrogenase__45__3MB__45__DH__45__lipoyl_c" id="M_BCAA__45__dehydrogenase__45__3MB__45__DH__45__lipoyl_c" name="a [apo BCAA dehydrogenase E2 protein] N6-S-[3-methylbutanoyl]dihydrolipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H23O2S2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3__45__KETOLACTOSE_c" id="M_3__45__KETOLACTOSE_c" name="3&apos;-ketolactose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H20O11">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 340.2806</p>
            <p>smiles: OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)[C@H](O)O[C@@H]2CO)[C@H](O)C(=O)[C@H]1O</p>
            <p>inchikey: HKKHTABTHSUDBP-WMIWJMKMSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__KETOLACTOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H20O11/c13-1-3-5(15)6(16)9(19)12(22-3)23-10-4(2-14)21-11(20)8(18)7(10)17/h3-5,7-15,17-20H,1-2H2/t3-,4-,5+,7-,8-,9-,10-,11-,12+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__1242_c" id="M_CPD__45__1242_c" name="3-keto-&amp;beta;-D-galactose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 178.14</p>
            <p>smiles: OC[C@H]1O[C@@H](O)[C@H](O)C(=O)[C@H]1O</p>
            <p>inchikey: APIQNBNBIICCON-FKMSRSAHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__1242_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H10O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-3,5-8,10-11H,1H2/t2-,3+,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_4__45__IMIDAZOLEACETATE_c" id="M_4__45__IMIDAZOLEACETATE_c" name="4-imidazoleacetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H5N2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 125.1059</p>
            <p>smiles: [O-]C(=O)Cc1c[nH]cn1</p>
            <p>inchikey: PRJKNHOMHKJCEJ-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_4__45__IMIDAZOLEACETATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H6N2O2/c8-5(9)1-4-2-6-3-7-4/h2-3H,1H2,(H,6,7)(H,8,9)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_IMIDAZOLE_ACETALDEHYDE_c" id="M_IMIDAZOLE_ACETALDEHYDE_c" name="imidazole acetaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6N2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 110.1139</p>
            <p>smiles: O=CCc1c[nH]cn1</p>
            <p>inchikey: MQSRGWNVEZRLDK-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_IMIDAZOLE_ACETALDEHYDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H6N2O/c8-2-1-5-3-6-4-7-5/h2-4H,1H2,(H,6,7)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__10687_c" id="M_CPD__45__10687_c" name="3-acetamidopropanal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 115.1305</p>
            <p>smiles: [H]C(=O)CCNC(C)=O</p>
            <p>inchikey: ARJPPNFIEQKVBB-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__10687_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H9NO2/c1-5(8)6-3-2-4-7/h4H,2-3H2,1H3,(H,6,8)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__11268_c" id="M_CPD__45__11268_c" name="N1,N12-diacetylspermine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C14H32N4O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 288.4284</p>
            <p>smiles: CC(=O)NCCC[NH2+]CCCC[NH2+]CCCNC(C)=O</p>
            <p>inchikey: NPDTUDWGJMBVEP-UHFFFAOYSA-P</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__11268_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C14H30N4O2/c1-13(19)17-11-5-9-15-7-3-4-8-16-10-6-12-18-14(2)20/h15-16H,3-12H2,1-2H3,(H,17,19)(H,18,20)/p+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__THYROXINE_c" id="M_L__45__THYROXINE_c" name="L-thyroxine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H11I4NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 776.87</p>
            <p>smiles: [NH3+]C(Cc1cc(I)c(Oc2cc(I)c(O)c(I)c2)c(I)c1)C([O-])=O</p>
            <p>inchikey: XUIIKFGFIJCVMT-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_L__45__THYROXINE_c">
              <bqbiol:isVersionOf>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 951.9867</p>
            <p>smiles: [H][C@]([NH3+])(Cc1cc(I)c(Oc2cc(I)c(OC3([H])O[C@]([H])(C([O-])=O)[C@@]([H])(O)[C@]([H])(O)[C@@]3([H])O)c(I)c2)c(I)c1)C([O-])=O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 325.2912</p>
            <p>smiles: OC[C@H]1O[C@@H](Oc2ccccc2\C=C/C([O-])=O)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: GVRIYIMNJGULCZ-QLFWQTQQSA-M</p>
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      <species metaid="M_CPD__45__7418_c" id="M_CPD__45__7418_c" name="coumarinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H7O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 163.1506</p>
            <p>smiles: Oc1ccccc1\C=C/C([O-])=O</p>
            <p>inchikey: PMOWTIHVNWZYFI-WAYWQWQTSA-M</p>
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      <species metaid="M_NEUROSPORENE_c" id="M_NEUROSPORENE_c" name="all-trans neurosporene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H58">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 538.8885</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\C=C\C(\C)=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\C=C(/C)CCC=C(C)C</p>
            <p>inchikey: ATCICVFRSJQYDV-XILUKMICSA-N</p>
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        <annotation>
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      <species metaid="M_CPD__45__7419_c" id="M_CPD__45__7419_c" name="&amp;beta;-zeacarotene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H58">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 538.8885</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\C=C\C(\C)=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\C1=C(C)CCCC1(C)C</p>
            <p>inchikey: MICBIPJWKDDGNL-FILYMEKXSA-N</p>
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        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 538.8885</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\C=C\C(\C)=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\C1C(C)=CCCC1(C)C</p>
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        <annotation>
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      <species metaid="M_METHYL__45__MTAC_c" id="M_METHYL__45__MTAC_c" name="a [methyl-Co(III) methanol-specific corrinoid protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CoM_c" id="M_CoM_c" name="coenzyme M" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2H5O3S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 141.19</p>
            <p>smiles: [O-]S(=O)(=O)CCS</p>
            <p>inchikey: ZNEWHQLOPFWXOF-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CoM_c">
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H6O3S2/c3-7(4,5)2-1-6/h6H,1-2H2,(H,3,4,5)/p-1"/>
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      <species metaid="M_Me__45__CoM_c" id="M_Me__45__CoM_c" name="methyl-CoM" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H7O3S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 155.216</p>
            <p>smiles: CSCCS([O-])(=O)=O</p>
            <p>inchikey: FGMRHOCVEPGURB-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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                </rdf:Bag>
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      <species metaid="M_MTAC_c" id="M_MTAC_c" name="a [Co(I) methanol-specific corrinoid protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_MtmC__45__Proteins_c" id="M_MtmC__45__Proteins_c" name="a [Co(I) methylamine-specific corrinoid protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Methylated__45__MtmC__45__Proteins_c" id="M_Methylated__45__MtmC__45__Proteins_c" name="a [methyl-Co(III) methylamine-specific corrinoid protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CARBAMATE_c" id="M_CARBAMATE_c" name="carbamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CH2NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 60.0326</p>
            <p>smiles: NC([O-])=O</p>
            <p>inchikey: KXDHJXZQYSOELW-UHFFFAOYSA-M</p>
          </body>
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        <annotation>
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            <rdf:Description rdf:about="#M_CARBAMATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CH3NO2/c2-1(3)4/h2H2,(H,3,4)/p-1"/>
                </rdf:Bag>
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      <species metaid="M_ERGOSTEROL_c" id="M_ERGOSTEROL_c" name="ergosterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H44O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 396.6484</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])C3=CC=C4C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)\C=C\[C@H](C)C(C)C</p>
            <p>inchikey: DNVPQKQSNYMLRS-APGDWVJJSA-N</p>
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            <rdf:Description rdf:about="#M_ERGOSTEROL_c">
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      </species>
      <species metaid="M_CPD__45__11602_c" id="M_CPD__45__11602_c" name="ergosterol 3-O-&amp;beta;-D-glucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H54O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 558.789</p>
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      </species>
      <species metaid="M_Phosphorylated__45__phosphoglucomutase_c" id="M_Phosphorylated__45__phosphoglucomutase_c" name="a phosphorylated phosphoglucomutase" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ALPHA__45__GLUCOSE__45__16__45__BISPHOSPHATE_c" id="M_ALPHA__45__GLUCOSE__45__16__45__BISPHOSPHATE_c" name="&amp;alpha;-glucose 1,6-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 336.0861</p>
            <p>smiles: O[C@H]1[C@H](O)[C@@H](COP([O-])([O-])=O)O[C@H](OP([O-])([O-])=O)[C@@H]1O</p>
            <p>inchikey: RWHOZGRAXYWRNX-VFUOTHLCSA-J</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ALPHA__45__GLUCOSE__45__16__45__BISPHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H14O12P2/c7-3-2(1-16-19(10,11)12)17-6(5(9)4(3)8)18-20(13,14)15/h2-9H,1H2,(H2,10,11,12)(H2,13,14,15)/p-4/t2-,3-,4+,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Phosphoglucomutase_c" id="M_Phosphoglucomutase_c" name="a phosphoglucomutase" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3__45__P__45__SERINE_c" id="M_3__45__P__45__SERINE_c" name="3-phospho-L-serine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H6NO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 183.0577</p>
            <p>smiles: [NH3+][C@@H](COP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: BZQFBWGGLXLEPQ-REOHCLBHSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__P__45__SERINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H8NO6P/c4-2(3(5)6)1-10-11(7,8)9/h2H,1,4H2,(H,5,6)(H2,7,8,9)/p-2/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_IS30__45__Insertion__45__Sequences_c" id="M_IS30__45__Insertion__45__Sequences_c" name="IS30-Insertion-Sequences" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_IS30__45__with__45__Integrated__45__Transposon_c" id="M_IS30__45__with__45__Integrated__45__Transposon_c" name="IS30-with-Integrated-Transposon" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD0__45__1028_c" id="M_CPD0__45__1028_c" name="2-cis,6-trans,10-trans-geranylgeranyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C20H33O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 447.421</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/COP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: OINNEUNVOZHBOX-KWBDAJKESA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD0__45__1028_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H36O7P2/c1-17(2)9-6-10-18(3)11-7-12-19(4)13-8-14-20(5)15-16-26-29(24,25)27-28(21,22)23/h9,11,13,15H,6-8,10,12,14,16H2,1-5H3,(H,24,25)(H2,21,22,23)/p-3/b18-11+,19-13+,20-15-"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CDP_c" id="M_CDP_c" name="CDP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H12N3O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 400.1542</p>
            <p>smiles: Nc1ccn([C@@H]2O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]2O)c(=O)n1</p>
            <p>inchikey: ZWIADYZPOWUWEW-XVFCMESISA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CDP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H15N3O11P2/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H2,10,11,15)(H2,16,17,18)/p-3/t4-,6-,7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MALTOTETRAOSE_c" id="M_MALTOTETRAOSE_c" name="maltotetraose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C24H42O21">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 666.5777</p>
            <p>smiles: OC[C@H]1O[C@H](O[C@H]2[C@H](O)[C@@H](O)[C@@H](O[C@H]3[C@H](O)[C@@H](O)[C@@H](O[C@H]4[C@H](O)[C@@H](O)[C@@H](O)O[C@@H]4CO)O[C@@H]3CO)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: LUEWUZLMQUOBSB-ZLBHSGTGSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MALTOTETRAOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C24H42O21/c25-1-5-9(29)10(30)15(35)22(40-5)44-19-7(3-27)42-24(17(37)12(19)32)45-20-8(4-28)41-23(16(36)13(20)33)43-18-6(2-26)39-21(38)14(34)11(18)31/h5-38H,1-4H2/t5-,6-,7-,8-,9-,10+,11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21+,22-,23-,24-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MALTOTRIOSE_c" id="M_MALTOTRIOSE_c" name="maltotriose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H32O16">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 504.4371</p>
            <p>smiles: OC[C@@H](O)[C@@H](O[C@H]1O[C@H](CO)[C@@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)[C@H](O)[C@@H](O)C=O</p>
            <p>inchikey: RXVWSYJTUUKTEA-CGQAXDJHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MALTOTRIOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C18H32O16/c19-1-5(23)9(25)15(6(24)2-20)33-18-14(30)12(28)16(8(4-22)32-18)34-17-13(29)11(27)10(26)7(3-21)31-17/h1,5-18,20-30H,2-4H2/t5-,6+,7+,8+,9+,10+,11-,12+,13+,14+,15+,16+,17+,18+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_1__45__4__45__alpha__45__D__45__Glucan_c" id="M_1__45__4__45__alpha__45__D__45__Glucan_c" name="a 1,4-&amp;alpha;-D-glucan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD0__45__1065_c" id="M_CPD0__45__1065_c" name="aminopropylcadaverine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="3" fbc:chemicalFormula="C8H24N3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 162.2946</p>
            <p>smiles: [NH3+]CCCCC[NH2+]CCC[NH3+]</p>
            <p>inchikey: QZBYOYPROVGOGE-UHFFFAOYSA-Q</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD0__45__1065_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H21N3/c9-5-2-1-3-7-11-8-4-6-10/h11H,1-10H2/p+3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_G5__45__pppR__45__mRNAs_c" id="M_G5__45__pppR__45__mRNAs_c" name="a 5&apos;-(5&apos;-triphosphoguanosine)-purine-[mRNA]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Linoleoyl__45__groups_c" id="M_Linoleoyl__45__groups_c" name="a [glycerolipid]-linoleate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CDPDIACYLGLYCEROL_c" id="M_CDPDIACYLGLYCEROL_c" name="a CDP-diacylglycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C14H17N3O15P2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: Nc1ccn([C@@H]2O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@@H](COC([*])=O)OC([*])=O)[C@@H](O)[C@H]2O)c(=O)n1</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Glycerolipid__45__crepenynate_c" id="M_Glycerolipid__45__crepenynate_c" name="a [glycerolipid]-crepenynate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H29OR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCC#CC\C=C/CCCCCCCC(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_L__45__1__45__PHOSPHATIDYL__45__GLYCEROL__45__P_c" id="M_L__45__1__45__PHOSPHATIDYL__45__GLYCEROL__45__P_c" name="1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C8H11O13P2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@@H](COP([O-])([O-])=O)COP([O-])(=O)OC[C@@H](COC([*])=O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_NADP_e" id="M_NADP_e" name="NADP+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C21H25N7O17P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 740.3828</p>
            <p>smiles: NC(=O)c1ccc[n+](c1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](OP([O-])([O-])=O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XJLXINKUBYWONI-NNYOXOHSSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NADP_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/p-3/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NADPH_e" id="M_NADPH_e" name="NADPH" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C21H26N7O17P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 741.3913</p>
            <p>smiles: NC(=O)C1=CN(C=CC1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](OP([O-])([O-])=O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: ACFIXJIJDZMPPO-NNYOXOHSSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NADPH_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C21H30N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1,3-4,7-8,10-11,13-16,20-21,29-31H,2,5-6H2,(H2,23,32)(H,36,37)(H,38,39)(H2,22,24,25)(H2,33,34,35)/p-4/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MALONATE__45__S__45__ALD_c" id="M_MALONATE__45__S__45__ALD_c" name="3-oxopropanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H3O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 87.0547</p>
            <p>smiles: [H]C(=O)CC([O-])=O</p>
            <p>inchikey: OAKURXIZZOAYBC-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MALONATE__45__S__45__ALD_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H4O3/c4-2-1-3(5)6/h2H,1H2,(H,5,6)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MALTOPENTAOSE_c" id="M_MALTOPENTAOSE_c" name="maltopentaose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H52O26">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 828.7183</p>
            <p>smiles: OC[C@@H](O)[C@@H](O[C@H]1O[C@H](CO)[C@@H](O[C@H]2O[C@H](CO)[C@@H](O[C@H]3O[C@H](CO)[C@@H](O[C@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O)[C@H](O)[C@H]3O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)[C@H](O)[C@@H](O)C=O</p>
            <p>inchikey: FJCUPROCOFFUSR-GMMZZHHDSA-N</p>
          </body>
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        <annotation>
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            <p>mass: 990.8589</p>
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        <notes>
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        <notes>
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            <p>mass: 130.0794</p>
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            <p>mass: 650.9735</p>
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            <p>mass: 826.0902</p>
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            <p>mass: 951.9867</p>
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            <p>mass: 826.0902</p>
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            <rdf:Description rdf:about="#M_CPD__45__11402_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C21H20I3NO10/c22-9-6-8(1-2-13(9)26)33-17-10(23)3-7(4-11(17)24)5-12(25)20(32)35-21-16(29)14(27)15(28)18(34-21)19(30)31/h1-4,6,12,14-16,18,21,26-29H,5,25H2,(H,30,31)/p-1/t12-,14-,15-,16+,18-,21-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__11407_c" id="M_CPD__45__11407_c" name="thyroxine sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H10I4NO7S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 855.926</p>
            <p>smiles: [NH3+]C(Cc1cc(I)c(Oc2cc(I)c(OS([O-])(=O)=O)c(I)c2)c(I)c1)C([O-])=O</p>
            <p>inchikey: QYXIJUZWSSQICT-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__11407_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__11408_c" id="M_CPD__45__11408_c" name="triiodothyronine sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H11I3NO7S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 730.029</p>
            <p>smiles: [NH3+][C@@H](Cc1cc(I)c(Oc2ccc(OS([O-])(=O)=O)c(I)c2)c(I)c1)C([O-])=O</p>
            <p>inchikey: XBQYQXVJBNDCGY-LBPRGKRZSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__11408_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_METHYLAMINE_c" id="M_METHYLAMINE_c" name="methylamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="CH6N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 32.0645</p>
            <p>smiles: C[NH3+]</p>
            <p>inchikey: BAVYZALUXZFZLV-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_METHYLAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CH5N/c1-2/h2H2,1H3/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MtbC__45__Proteins_c" id="M_MtbC__45__Proteins_c" name="a [Co(I) dimethylamine-specific corrinoid protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Methylated__45__MtbC__45__Proteins_c" id="M_Methylated__45__MtbC__45__Proteins_c" name="a [methyl-Co(III) dimethylamine-specific corrinoid protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DIMETHYLAMINE_c" id="M_DIMETHYLAMINE_c" name="dimethylamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C2H8N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 46.0911</p>
            <p>smiles: C[NH2+]C</p>
            <p>inchikey: ROSDSFDQCJNGOL-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIMETHYLAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H7N/c1-3-2/h3H,1-2H3/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_TRIMETHYLAMINE_c" id="M_TRIMETHYLAMINE_c" name="trimethylamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H10N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 60.1177</p>
            <p>smiles: C[NH+](C)C</p>
            <p>inchikey: GETQZCLCWQTVFV-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_TRIMETHYLAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H9N/c1-4(2)3/h1-3H3/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MttC__45__Proteins_c" id="M_MttC__45__Proteins_c" name="a [Co(I) trimethylamine-specific corrinoid protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Methylated__45__MttC__45__Proteins_c" id="M_Methylated__45__MttC__45__Proteins_c" name="a [methyl-Co(III) trimethylamine-specific corrinoid protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CADAVERINE_c" id="M_CADAVERINE_c" name="cadaverine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C5H16N2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 104.1928</p>
            <p>smiles: [NH3+]CCCCC[NH3+]</p>
            <p>inchikey: VHRGRCVQAFMJIZ-UHFFFAOYSA-P</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CADAVERINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H14N2/c6-4-2-1-3-5-7/h1-7H2/p+2"/>
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              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_UDP__45__SULFOQUINOVOSE_c" id="M_UDP__45__SULFOQUINOVOSE_c" name="UDP-&amp;alpha;-D-sulfoquinovopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C15H21N2O19P2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 627.343</p>
            <p>smiles: O[C@@H]1[C@@H](COP([O-])(=O)OP([O-])(=O)O[C@H]2O[C@H](CS([O-])(=O)=O)[C@@H](O)[C@H](O)[C@H]2O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: FQANCGQCBCUSMI-JZMIEXBBSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_UDP__45__SULFOQUINOVOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C15H24N2O19P2S/c18-7-1-2-17(15(24)16-7)13-11(22)8(19)5(33-13)3-32-37(25,26)36-38(27,28)35-14-12(23)10(21)9(20)6(34-14)4-39(29,30)31/h1-2,5-6,8-14,19-23H,3-4H2,(H,25,26)(H,27,28)(H,16,18,24)(H,29,30,31)/p-3/t5-,6-,8-,9-,10+,11-,12-,13-,14-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CHOCOLA_A_c" id="M_CHOCOLA_A_c" name="all-trans-retinyl palmitate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C36H60O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 524.8604</p>
            <p>smiles: CCCCCCCCCCCCCCCC(=O)OC\C=C(/C)\C=C\C=C(/C)\C=C\C1=C(C)CCCC1(C)C</p>
            <p>inchikey: VYGQUTWHTHXGQB-FFHKNEKCSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CHOCOLA_A_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C36H60O2/c1-7-8-9-10-11-12-13-14-15-16-17-18-19-25-35(37)38-30-28-32(3)23-20-22-31(2)26-27-34-33(4)24-21-29-36(34,5)6/h20,22-23,26-28H,7-19,21,24-25,29-30H2,1-6H3/b23-20+,27-26+,31-22+,32-28+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_SULFOQUINOVOSYLDIACYLGLYCEROL_c" id="M_SULFOQUINOVOSYLDIACYLGLYCEROL_c" name="an 6-sulfo-&amp;alpha;-D-quinovosyl diacylglycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H15O12SR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@H]1[C@H](O)[C@@H](CS([O-])(=O)=O)O[C@H](OC[C@@H](COC([*])=O)OC([*])=O)[C@@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__452_c" id="M_CPD__45__452_c" name="a 6-(N-acetyl-&amp;alpha;-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H29NO18PR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1O[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)[C@@H](O)[C@H]1OP([O-])(=O)OC[C@@H](COC([*])=O)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__1113_c" id="M_CPD__45__1113_c" name="6-(&amp;alpha;-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H28NO17PR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@@](COC([*])=O)(COP([O-])(=O)O[C@@H]1[C@H](O)[C@H](O)[C@@H](O)[C@H](O)[C@H]1O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1[NH3+])OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Galactosyl__45__galactosyl__45__diacyl__45__glycerols_c" id="M_Galactosyl__45__galactosyl__45__diacyl__45__glycerols_c" name="an &amp;alpha;,&amp;beta;-digalactosyldiacylglycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H26O15R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_mRNAs__45__With__45__PolyA__45__Tails_c" id="M_mRNAs__45__With__45__PolyA__45__Tails_c" name="a mRNA with poly(A) tail" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_1__45__KETO__45__2__45__METHYLVALERATE_c" id="M_1__45__KETO__45__2__45__METHYLVALERATE_c" name="(R)-2,3-dihydroxy-3-methylpentanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H11O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 147.1497</p>
            <p>smiles: CC[C@@](C)(O)[C@@H](O)C([O-])=O</p>
            <p>inchikey: PDGXJDXVGMHUIR-UJURSFKZSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_1__45__KETO__45__2__45__METHYLVALERATE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_2__45__ACETO__45__2__45__HYDROXY__45__BUTYRATE_c" id="M_2__45__ACETO__45__2__45__HYDROXY__45__BUTYRATE_c" name="(S)-2-aceto-2-hydroxybutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H9O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 145.1338</p>
            <p>smiles: CC[C@](O)(C(C)=O)C([O-])=O</p>
            <p>inchikey: VUQLHQFKACOHNZ-LURJTMIESA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_2__45__ACETO__45__2__45__HYDROXY__45__BUTYRATE_c">
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                </rdf:Bag>
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      <species metaid="M_CPD1F__45__134_c" id="M_CPD1F__45__134_c" name="gibberellin A9" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H23O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 315.3841</p>
            <p>smiles: [H][C@@]12C[C@]3(CC1=C)[C@@H](C([O-])=O)[C@]1([H])[C@]4(C)CCC[C@@]1(OC4=O)[C@]3([H])CC2</p>
            <p>inchikey: MHVYWTXXZIFXDT-PKZSZHAESA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 331.3835</p>
            <p>smiles: [H][C@@]12C[C@]3(CC1=C)[C@@H](C([O-])=O)[C@]1([H])[C@@]4(C)C[C@@H](O)C[C@@]1(OC4=O)[C@]3([H])CC2</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1051.972</p>
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            <p>inchikey: FJWJALRUNNZIBB-DDQUOPDJSA-J</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 101.0812</p>
            <p>smiles: CC(C=O)C([O-])=O</p>
            <p>inchikey: VOKUMXABRRXHAR-UHFFFAOYSA-M</p>
          </body>
        </notes>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_Acyl__45__protein__45__synthetase_c" id="M_Acyl__45__protein__45__synthetase_c" name="a [LuxE]-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H6NOSR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: SC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_LuxE__45__long__45__chain__45__fatty__45__acyl__45__L__45__cysteine_c" id="M_LuxE__45__long__45__chain__45__fatty__45__acyl__45__L__45__cysteine_c" name="a [LuxE]-S-(long-chain fatty acyl)-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4NO2SR3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]C(=O)SC[C@H](N*)C(*)=O</p>
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        </notes>
      </species>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 242.1216</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: O[C@H]1[C@H](O)[C@H](O)[C@H](OP([O-])([O-])=O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: INAPMGSXUVUWAF-PTQMNWPWSA-L</p>
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                </rdf:Bag>
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      <species metaid="M_PPI_C_m" id="M_PPI_C_m" name="diphosphate" compartment="C_m" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="HO7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.9529</p>
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            <p>inchikey: XPPKVPWEQAFLFU-UHFFFAOYSA-K</p>
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        </notes>
        <annotation>
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      <species metaid="M_PPI_C_p" id="M_PPI_C_p" name="diphosphate" compartment="C_p" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="HO7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.9529</p>
            <p>smiles: OP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: XPPKVPWEQAFLFU-UHFFFAOYSA-K</p>
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        </notes>
        <annotation>
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      <species metaid="M_CPD__45__15180_c" id="M_CPD__45__15180_c" name="a 1-acyl-sn-glycero-3-phospho-D-myo-inositol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H17O12PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@@](O)(COC([*])=O)COP([O-])(=O)O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+][C@@H](CCc1ncc(C[C@H](N-*)C(-*)=O)[nH]1)C([O-])=O</p>
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        </notes>
      </species>
      <species metaid="M_DIPHTINE_c" id="M_DIPHTINE_c" name="a diphthine-[translation elongation factor 2]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Soluble__45__Heteroglycans_c" id="M_Soluble__45__Heteroglycans_c" name="a plant soluble heteroglycan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD0__45__934_c" id="M_CPD0__45__934_c" name="glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-8" fbc:chemicalFormula="C137H241N2O65P3">
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 3049.2795</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 237.1846</p>
            <p>smiles: OCC(O)C(O)C(O)C(O)CC(=O)C([O-])=O</p>
            <p>inchikey: KYQCXUMVJGMDNG-UHFFFAOYSA-M</p>
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      <species metaid="M_Persulfurated__45__L__45__cysteine__45__desulfurases_c" id="M_Persulfurated__45__L__45__cysteine__45__desulfurases_c" name="an S-sulfanyl-[L-cysteine desulfurase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_D__45__form__45__FeS__45__Cluster__45__Scaffold__45__Proteins_c" id="M_D__45__form__45__FeS__45__Cluster__45__Scaffold__45__Proteins_c" name="a [disordered-form [Fe-S] cluster scaffold protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_S__45__CD__45__Apo__45__SP__45__Complex_c" id="M_S__45__CD__45__Apo__45__SP__45__Complex_c" name="an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Sulfur__45__Carrier__45__Proteins__45__ThiI_c" id="M_Sulfur__45__Carrier__45__Proteins__45__ThiI_c" name="a [ThiI sulfur-carrier protein]-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Sulfurylated__45__ThiI_c" id="M_Sulfurylated__45__ThiI_c" name="a [ThiI sulfur-carrier protein]-S-sulfanyl-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 656.727</p>
            <p>smiles: Cc1c2Cc3[nH]c(Cc4[nH]c(Cc5[nH]c(Cc([nH]2)c1CCC([O-])=O)c(C)c5CCC([O-])=O)c(C)c4CCC([O-])=O)c(CCC([O-])=O)c3C</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 921.9381</p>
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        <notes>
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            <p>mass: 746.8214</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 922.9455</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 620.9249</p>
            <p>smiles: Oc1ccc(Oc2c(I)cc(CC([O-])=O)cc2I)cc1I</p>
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 797.049</p>
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            <p>mass: 796.0416</p>
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      <species metaid="M_D__45__GLUCOSAMINE__45__6__45__P_c" id="M_D__45__GLUCOSAMINE__45__6__45__P_c" name="D-glucosamine 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H13NO8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.1436</p>
            <p>smiles: [NH3+][C@H]1C(O)O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@@H]1O</p>
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      <species metaid="M_CPD__45__17329_c" id="M_CPD__45__17329_c" name="(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H68N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1120.046</p>
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      <species metaid="M_CPD__45__18489_c" id="M_CPD__45__18489_c" name="(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H70N7O18P3S">
        <notes>
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            <p>mass: 1122.062</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1104.047</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1102.031</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1120.046</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1118.03</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1075.993</p>
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            <p>mass: 127.1412</p>
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            <p>mass: 463.3689</p>
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            <p>mass: 155.1286</p>
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            <p>mass: 626.5169</p>
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                </rdf:Bag>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__173_c" id="M_CPD__45__173_c" name="salicyl alcohol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 124.1372</p>
            <p>smiles: OCc1ccccc1O</p>
            <p>inchikey: CQRYARSYNCAZFO-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_3Z__45__PHYTOCHROMOBILIN_c" id="M_3Z__45__PHYTOCHROMOBILIN_c" name="(3Z)-phytochromobilin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C33H34N4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 582.6474</p>
            <p>smiles: C\C=C1\C(C)C(=O)N\C\1=C/C1=N/C(=C\c2[nH]c(\C=C3/NC(=O)C(C=C)=C3C)c(C)c2CCC([O-])=O)/C(CCC([O-])=O)=C1C</p>
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            <rdf:Description rdf:about="#M_3Z__45__PHYTOCHROMOBILIN_c">
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              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_5__45__AMINOPENTANOATE_c" id="M_5__45__AMINOPENTANOATE_c" name="5-aminopentanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 117.1463</p>
            <p>smiles: [NH3+]CCCCC([O-])=O</p>
            <p>inchikey: JJMDCOVWQOJGCB-UHFFFAOYSA-N</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_5__45__AMINOPENTANOATE_c">
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                </rdf:Bag>
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      <species metaid="M_CPD__45__394_c" id="M_CPD__45__394_c" name="N-methylputrescine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C5H16N2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 104.1928</p>
            <p>smiles: C[NH2+]CCCC[NH3+]</p>
            <p>inchikey: RMIVMBYMDISYFZ-UHFFFAOYSA-P</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_CPD__45__7247_c" id="M_CPD__45__7247_c" name="all-trans-13,14-dihydroretinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H32O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 288.4675</p>
            <p>smiles: CC(CCO)\C=C\C=C(/C)\C=C\C1=C(C)CCCC1(C)C</p>
            <p>inchikey: OVBOQVAIYMSUDT-HRYGCDPOSA-N</p>
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        </notes>
        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 84.1391</p>
            <p>smiles: C[N+]1=CCCC1</p>
            <p>inchikey: FDWZAOGDOVQOLD-UHFFFAOYSA-N</p>
          </body>
        </notes>
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      <species metaid="M_D__45__TARTRATE_c" id="M_D__45__TARTRATE_c" name="D-tartrate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 148.0721</p>
            <p>smiles: O[C@@H]([C@H](O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: FEWJPZIEWOKRBE-LWMBPPNESA-L</p>
          </body>
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            <rdf:Description rdf:about="#M_D__45__TARTRATE_c">
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      <species metaid="M_mRNAs_c" id="M_mRNAs_c" name="an mRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_ACETOACETYL__45__COA_c" id="M_ACETOACETYL__45__COA_c" name="acetoacetyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H36N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 847.578</p>
            <p>smiles: CC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: OJFDKHTZOUZBOS-CITAKDKDSA-J</p>
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      <species metaid="M_D__45__SEDOHEPTULOSE__45__1__45__7__45__P2_c" id="M_D__45__SEDOHEPTULOSE__45__1__45__7__45__P2_c" name="D-sedoheptulose 1,7-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C7H12O13P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 366.1121</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@@H](O)[C@H](O)C(=O)COP([O-])([O-])=O</p>
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        <notes>
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            <p>mass: 79.97</p>
            <p>smiles: [Se-][H]</p>
            <p>inchikey: SPVXKVOXSXTJOY-UHFFFAOYSA-M</p>
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        </notes>
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      <species metaid="M_THZ__45__P_c" id="M_THZ__45__P_c" name="4-methyl-5-(2-phosphooxyethyl)thiazole" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H8NO4PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 221.172</p>
            <p>smiles: Cc1ncsc1CCOP([O-])([O-])=O</p>
            <p>inchikey: OCYMERZCMYJQQO-UHFFFAOYSA-L</p>
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      <species metaid="M_CPD__45__499_c" id="M_CPD__45__499_c" name="(R)-5-phosphomevalonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H10O7P">
        <notes>
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            <p>mass: 225.1148</p>
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            <p>inchikey: OKZYCXHTTZZYSK-ZCFIWIBFSA-K</p>
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      <species metaid="M_CPD__45__641_c" id="M_CPD__45__641_c" name="(R)-mevalonate diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O10P2">
        <notes>
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            <p>mass: 304.0873</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 140.1626</p>
            <p>smiles: [H]C(=O)[C@@H]([NH3+])Cc1c[nH]cn1</p>
            <p>inchikey: VYOIELONWKIZJS-YFKPBYRVSA-O</p>
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      <species metaid="M_L__45__HISTIDINOL__45__P_c" id="M_L__45__HISTIDINOL__45__P_c" name="L-histidinol phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H11N3O4P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 220.1436</p>
            <p>smiles: [NH3+][C@H](COP([O-])([O-])=O)Cc1c[nH]cn1</p>
            <p>inchikey: CWNDERHTHMWBSI-YFKPBYRVSA-M</p>
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        </notes>
        <annotation>
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      <species metaid="M_IMIDAZOLE__45__ACETOL__45__P_c" id="M_IMIDAZOLE__45__ACETOL__45__P_c" name="imidazole acetol-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H7N2O5P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 218.105</p>
            <p>smiles: [O-]P([O-])(=O)OCC(=O)Cc1c[nH]cn1</p>
            <p>inchikey: YCFFMSOLUMRAMD-UHFFFAOYSA-L</p>
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      <species metaid="M_2__45__METHYL__45__3__45__HYDROXY__45__BUTYRYL__45__COA_c" id="M_2__45__METHYL__45__3__45__HYDROXY__45__BUTYRYL__45__COA_c" name="(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H40N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 863.62</p>
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        <annotation>
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      <species metaid="M_RIBULOSE__45__5P_c" id="M_RIBULOSE__45__5P_c" name="D-ribulose 5-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.095</p>
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            <p>inchikey: FNZLKVNUWIIPSJ-UHNVWZDZSA-L</p>
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      <species metaid="M_D__45__RIBULOSE__45__15__45__P2_c" id="M_D__45__RIBULOSE__45__15__45__P2_c" name="D-ribulose-1,5-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C5H8O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 306.0601</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)[C@@H](O)C(=O)COP([O-])([O-])=O</p>
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      <species metaid="M_Sulfhydryls_c" id="M_Sulfhydryls_c" name="R&apos;C(R)SH" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_S__45__CD__45__S__45__SP__45__Complex_c" id="M_S__45__CD__45__S__45__SP__45__Complex_c" name="an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CD__45__2S__45__SP__45__Complex_c" id="M_CD__45__2S__45__SP__45__Complex_c" name="a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_NICOTINE_c" id="M_NICOTINE_c" name="(S)-nicotine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C10H15N2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 163.239</p>
            <p>smiles: [H][C@]1(CCC[NH+]1C)c1cccnc1</p>
            <p>inchikey: SNICXCGAKADSCV-JTQLQIEISA-O</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_NICOTINE_c">
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      <species metaid="M_CD__45__SP__45__2Fe2S__45__Complex_c" id="M_CD__45__SP__45__2Fe2S__45__Complex_c" name="a [cysteine desulfurase]-[scaffold protein-(2Fe-2S)] complex" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Co__45__chaperone__45__SP__45__2Fe2S__45__Complex_c" id="M_Co__45__chaperone__45__SP__45__2Fe2S__45__Complex_c" name="a [co-chaperone]-[scaffold protein-(2Fe-2S)] complex" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_FeS__45__Cluster__45__Co__45__Chaperones_c" id="M_FeS__45__Cluster__45__Co__45__Chaperones_c" name="an [Fe-S cluster biosynthesis co-chaperone]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_L__45__Cysteine__45__Desulfurases_c" id="M_L__45__Cysteine__45__Desulfurases_c" name="an [L-cysteine desulfurase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Chap__45__ATP__45__Co__45__chaperone__45__SP__45__2Fe2S__45__Complex_c" id="M_Chap__45__ATP__45__Co__45__chaperone__45__SP__45__2Fe2S__45__Complex_c" name="a [chaperone-ATP]-[co-chaperone]-[scaffold protein-(2Fe-2S)] complex" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_FeS__45__Cluster__45__Chaperones__45__ATP_c" id="M_FeS__45__Cluster__45__Chaperones__45__ATP_c" name="an [Fe-S cluster biosynthesis chaperone]-ATP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Apo__45__FeS__45__cluster__45__proteins_c" id="M_Apo__45__FeS__45__cluster__45__proteins_c" name="an apo-iron-sulfur protein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Chap__45__ADP__45__apo__45__SP__45__Complex_c" id="M_Chap__45__ADP__45__apo__45__SP__45__Complex_c" name="a [chaperone-ADP]-[disordered-form scaffold protein] complex" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2Fe__45__2S__45__proteins_c" id="M_2Fe__45__2S__45__proteins_c" name="an [2Fe-2S] cluster protein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Phosphoacetylglucosamine__45__Mutase_c" id="M_Phosphoacetylglucosamine__45__Mutase_c" name="a phosphoacetylglucosamine mutase" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__16__45__BIS__45__P_c" id="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__16__45__BIS__45__P_c" name="N-acetyl-D-glucosamine 1,6-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C8H13NO12P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 377.138</p>
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](COP([O-])([O-])=O)OC1OP([O-])([O-])=O</p>
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      <species metaid="M_GAMA__45__TOCOPHEROL_c" id="M_GAMA__45__TOCOPHEROL_c" name="&amp;gamma;-tocopherol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H48O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 416.6795</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC[C@]1(C)CCc2cc(O)c(C)c(C)c2O1</p>
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            <p>mass: 1084.057</p>
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            <p>inchikey: KRTIFNFQCJTGMV-DYAVHEMFSA-J</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1086.073</p>
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      <species metaid="M_CPD__45__17813_c" id="M_CPD__45__17813_c" name="(2E,11Z)-hexadec-2,11-dienoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H58N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 997.882</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 688.3959</p>
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        <notes>
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            <p>mass: 80.064</p>
            <p>smiles: [O-]S([O-])=O</p>
            <p>inchikey: LSNNMFCWUKXFEE-UHFFFAOYSA-L</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 344.198</p>
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      <species metaid="M_COPROPORPHYRINOGEN_I_c" id="M_COPROPORPHYRINOGEN_I_c" name="coproporphyrinogen I" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C36H40N4O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 656.727</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 392.33</p>
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      <species metaid="M_3__45__oxo__45__cis__45__D7__45__tetradecenoyl__45__ACPs_c" id="M_3__45__oxo__45__cis__45__D7__45__tetradecenoyl__45__ACPs_c" name="a (7Z)-3-oxotetradec-7-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__8122_c" id="M_CPD__45__8122_c" name="molybdopterin adenine dinucleotide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C20H23N10O12P2S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 721.536</p>
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      <species metaid="M_Cis__45__Delta5__45__dodecenoyl__45__ACPs_c" id="M_Cis__45__Delta5__45__dodecenoyl__45__ACPs_c" name="a (5Z)-dodec-5-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD__45__369_c" id="M_CPD__45__369_c" name="L-iditol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O6">
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 182.1718</p>
            <p>smiles: OC[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)CO</p>
            <p>inchikey: FBPFZTCFMRRESA-UNTFVMJOSA-N</p>
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      <species metaid="M_3__45__hydroxy__45__cis__45__D7__45__tetraecenoyl__45__ACPs_c" id="M_3__45__hydroxy__45__cis__45__D7__45__tetraecenoyl__45__ACPs_c" name="a (3R,7Z)-3-hydroxytetradec-7-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Trans__45__D2__45__cis__45__D7__45__tetradecenoyl__45__ACPs_c" id="M_Trans__45__D2__45__cis__45__D7__45__tetradecenoyl__45__ACPs_c" name="a (2E,7Z)-tetradeca-2,7-dienoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Cytochromes__45__C__45__Oxidized_c" id="M_Cytochromes__45__C__45__Oxidized_c" name="an oxidized c-type cytochrome" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Cytochromes__45__C__45__Reduced_c" id="M_Cytochromes__45__C__45__Reduced_c" name="a reduced c-type cytochrome" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD__45__3_c" id="M_CPD__45__3_c" name="molybdate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="MoO4">
        <notes>
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            <p>mass: 159.94</p>
            <p>smiles: [O-][Mo]([O-])(=O)=O</p>
            <p>inchikey: MEFBJEMVZONFCJ-UHFFFAOYSA-N</p>
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      <species metaid="M_CPD__45__8123_c" id="M_CPD__45__8123_c" name="MoO2-molybdopterin cofactor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H10MoN5O8PS2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 519.26</p>
            <p>smiles: [H][C@]12Nc3nc(N)[nH]c(=O)c3N[C@@]1([H])C1=C(S[Mo](=O)(=O)S1)[C@@H](COP([O-])([O-])=O)O2</p>
            <p>inchikey: HDAJUGGARUFROU-JSUDGWJLSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__8123_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H14N5O6PS2.Mo.2O/c11-10-14-7-4(8(16)15-10)12-3-6(24)5(23)2(21-9(3)13-7)1-20-22(17,18)19;;;/h2-3,9,12,23-24H,1H2,(H2,17,18,19)(H4,11,13,14,15,16);;;/q;+2;;/p-4/t2-,3+,9-;;;/m1.../s1"/>
                </rdf:Bag>
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            </rdf:Description>
          </rdf:RDF>
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      <species metaid="M_AMMONIA_c" id="M_AMMONIA_c" name="ammonia" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="H4N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 18.0379</p>
            <p>smiles: [H][N+]([H])([H])[H]</p>
            <p>inchikey: QGZKDVFQNNGYKY-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_AMMONIA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H3N/h1H3/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_CPD__45__18550_c" id="M_CPD__45__18550_c" name="CPD-18550" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H17N7O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 502.3547</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OC(=O)c2cnc3ccccc3n2)[C@@H](O)[C@H]1O</p>
            <p>inchikey: VMJWEICPCDRXQL-SCFUHWHPSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_QXC__45__ACP_c" id="M_QXC__45__ACP_c" name="QXC-ACP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_1__45__Alkyl__45__2__45__acyl__45__3D__45__galactosyl__45__sn__45__glycerol_c" id="M_1__45__Alkyl__45__2__45__acyl__45__3D__45__galactosyl__45__sn__45__glycerol_c" name="a 1-O-alkyl-2-O-acyl-3-O-&amp;beta;-D-galactosyl-sn-glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16O9R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H](OC[C@@H](CO[*])OC([*])=O)[C@H](O)[C@@H](O)[C@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Seminolipids_c" id="M_Seminolipids_c" name="a seminolipid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H15O12SR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H](OC[C@@H](CO[*])OC([*])=O)[C@H](O)[C@@H](OS([O-])(=O)=O)[C@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Lipoyl__45__Protein__45__N6__45__lipoyllysine_c" id="M_Lipoyl__45__Protein__45__N6__45__lipoyllysine_c" name="a [lipoyl-carrier protein]-N6-lipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14NOS2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]NC(=O)CCCCC1CCSS1</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__13174_c" id="M_CPD__45__13174_c" name="salicyl-6-hydroxy-2-cyclohexene-on-oyl" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H14O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 262.258</p>
            <p>smiles: Oc1ccccc1COC(=O)C1(O)C=CCCC1=O</p>
            <p>inchikey: WYYMYYOXCOEMCU-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_CPD__45__10363_c" id="M_CPD__45__10363_c" name="a 1,2-diacyl-3-O-[&amp;beta;-D-galactosyl-(1&amp;rarr;6)-&amp;beta;-D-galactosyl]-sn-glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H26O15R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H](OC[C@H]2O[C@@H](OC[C@@H](COC([*])=O)OC([*])=O)[C@H](O)[C@@H](O)[C@H]2O)[C@H](O)[C@@H](O)[C@H]1O</p>
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        </notes>
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      <species metaid="M_CPD__45__465_c" id="M_CPD__45__465_c" name="presqualene diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C30H49O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 583.655</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\[C@H]1[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@]1(C)CC\C=C(/C)CCC=C(C)C</p>
            <p>inchikey: ATZKAUGGNMSCCY-VYCBRMPGSA-K</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        </annotation>
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      <species metaid="M_CPD__45__409_c" id="M_CPD__45__409_c" name="a 2-acylglycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7O4R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OCC(CO)OC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Linear__45__Malto__45__Oligosaccharides_c" id="M_Linear__45__Malto__45__Oligosaccharides_c" name="a linear malto-oligosaccharide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__13376_c" id="M_CPD__45__13376_c" name="XXLG xyloglucan oligosaccharide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C45H76O38">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1225.0621</p>
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            <p>inchikey: UJNIQUVNFJIFMG-IKGYADNMSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_N__45__ALPHA__45__ACETYLORNITHINE_c" id="M_N__45__ALPHA__45__ACETYLORNITHINE_c" name="N-acetyl-L-ornithine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.1977</p>
            <p>smiles: CC(=O)N[C@@H](CCC[NH3+])C([O-])=O</p>
            <p>inchikey: JRLGPAXAGHMNOL-LURJTMIESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_N__45__ALPHA__45__ACETYLORNITHINE_c">
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                <rdf:Bag>
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      <species metaid="M_CPD__45__8529_c" id="M_CPD__45__8529_c" name="R&apos;C(R)S-S(R)CR&apos;" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_HIS__45__tRNAs_c" id="M_HIS__45__tRNAs_c" name="a tRNAHis" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Charged__45__HIS__45__tRNAs_c" id="M_Charged__45__HIS__45__tRNAs_c" name="an L-histidyl-[tRNAHis]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PHYTANATE_c" id="M_PHYTANATE_c" name="phytanate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H39O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 311.523</p>
            <p>smiles: CC(C)CCCC(C)CCCC(C)CCCC(C)CC([O-])=O</p>
            <p>inchikey: RLCKHJSFHOZMDR-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PHYTANATE_c">
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                </rdf:Bag>
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      </species>
      <species metaid="M_CPD__45__206_c" id="M_CPD__45__206_c" name="phytanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C41H70N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1058.02</p>
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            <p>inchikey: NRJQGHHZMSOUEN-ZJGVPSKGSA-J</p>
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        <annotation>
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      </species>
      <species metaid="M_Charged__45__SER__45__tRNAs_c" id="M_Charged__45__SER__45__tRNAs_c" name="an L-seryl-[tRNAser]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_SER__45__tRNAs_c" id="M_SER__45__tRNAs_c" name="a tRNAser" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DEHYDROSPHINGANINE_c" id="M_DEHYDROSPHINGANINE_c" name="3-dehydrosphinganine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C18H38NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 300.4993</p>
            <p>smiles: CCCCCCCCCCCCCCCC(=O)[C@@H]([NH3+])CO</p>
            <p>inchikey: KBUNOSOGGAARKZ-KRWDZBQOSA-O</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_DEHYDROSPHINGANINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C18H37NO2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(21)17(19)16-20/h17,20H,2-16,19H2,1H3/p+1/t17-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__7015_c" id="M_CPD__45__7015_c" name="71-hydroxychlorophyllide a" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C35H32MgN4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 628.958</p>
            <p>smiles: CCC1=C(CO)C2=[N+]3C1=Cc1c(C)c4C(=O)[C-](C(=O)OC)C5=C6[C@@H](CCC([O-])=O)[C@H](C)C7=[N+]6[Mg--]3(n1c45)n1c(=C7)c(C)c(C=C)c1=C2</p>
            <p>inchikey: SLCXPQHXALJFPR-XXRBRTKDSA-K</p>
          </body>
        </notes>
        <annotation>
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              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__19759_c" id="M_CPD__45__19759_c" name="71-dihydroxychlorophyllide a" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Peptide__45__3__45__hydroxy__45__L__45__Aspartates_c" id="M_Peptide__45__3__45__hydroxy__45__L__45__Aspartates_c" name="a [protein]-3-hydroxy-L-aspartate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H5N2O5R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__8624_c" id="M_CPD__45__8624_c" name="a [protein]-L-proline (&amp;omega; = 180)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8N2O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]NC(=O)[C@@H]1CCCN1C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__8625_c" id="M_CPD__45__8625_c" name="a [protein]-L-proline (&amp;omega; = 0)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8N2O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]NC(=O)[C@@H]1CCCN1C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_cis__45__cis__45__D17__45__35__45__3__45__hydroxyC54__45__2__45__ACPs_c" id="M_cis__45__cis__45__D17__45__35__45__3__45__hydroxyC54__45__2__45__ACPs_c" name="a cis,cis-delta17,35-3-hydroxyC54:2-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_trans__45__D2__45__cis__45__cis__45__D17__45__35__45__C54__45__3__45__ACPs_c" id="M_trans__45__D2__45__cis__45__cis__45__D17__45__35__45__C54__45__3__45__ACPs_c" name="trans-D2-cis-cis-D17-35-C54-3-ACPs" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_4__45__AMINO__45__BUTYRALDEHYDE_c" id="M_4__45__AMINO__45__BUTYRALDEHYDE_c" name="4-aminobutanal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C4H10NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 88.1278</p>
            <p>smiles: [H]C(=O)CCC[NH3+]</p>
            <p>inchikey: DZQLQEYLEYWJIB-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_4__45__AMINO__45__BUTYRALDEHYDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H9NO/c5-3-1-2-4-6/h4H,1-3,5H2/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_cis__45__delta9__45__3__45__hydroxymontanoyl__45__ACPs_c" id="M_cis__45__delta9__45__3__45__hydroxymontanoyl__45__ACPs_c" name="a cis-delta9-3-hydroxyC28:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2__45__DEOXYRIBOSE_c" id="M_2__45__DEOXYRIBOSE_c" name="2&apos;-deoxyribose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 134.1305</p>
            <p>smiles: [H]C(=O)CC(O)C(O)CO</p>
            <p>inchikey: ASJSAQIRZKANQN-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_2__45__DEOXYRIBOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H10O4/c6-2-1-4(8)5(9)3-7/h2,4-5,7-9H,1,3H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
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      <species metaid="M_2__45__Me__45__Branched__45__234__45__Sat__45__FA_c" id="M_2__45__Me__45__Branched__45__234__45__Sat__45__FA_c" name="a 2-methyl branched 2,3,4-saturated fatty acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H6O2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C[*])C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_2__45__Me__45__Branched__45__234__45__Sat__45__Fatty__45__Acyl__45__CoA_c" id="M_2__45__Me__45__Branched__45__234__45__Sat__45__Fatty__45__Acyl__45__CoA_c" name="a 2-methyl branched 2,3,4-saturated fatty acyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H37N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C[*])C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
          </body>
        </notes>
      </species>
      <species metaid="M_cis__45__delta9__45__3__45__oxo__45__montanoyl__45__ACPs_c" id="M_cis__45__delta9__45__3__45__oxo__45__montanoyl__45__ACPs_c" name="a (9Z)-3-oxooctacos-9-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PRISTANATE_c" id="M_PRISTANATE_c" name="pristanate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H37O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 297.4964</p>
            <p>smiles: CC(C)CCCC(C)CCCC(C)CCCC(C)C([O-])=O</p>
            <p>inchikey: PAHGJZDQXIOYTH-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PRISTANATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C19H38O2/c1-15(2)9-6-10-16(3)11-7-12-17(4)13-8-14-18(5)19(20)21/h15-18H,6-14H2,1-5H3,(H,20,21)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__14675_c" id="M_CPD__45__14675_c" name="pristanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C40H68N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1043.993</p>
            <p>smiles: CC(C)CCCC(C)CCCC(C)CCCC(C)C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: XYJPSQPVCBNZHT-TUKYSRJDSA-J</p>
          </body>
        </notes>
        <annotation>
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                </rdf:Bag>
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        </annotation>
      </species>
      <species metaid="M_cis__45__cis__45__D19__45__37__45__C56__45__2__45__ACPs_c" id="M_cis__45__cis__45__D19__45__37__45__C56__45__2__45__ACPs_c" name="a cis,cis-delta19-37-C56:2-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__13081_c" id="M_CPD__45__13081_c" name="solasodine 3-O-&amp;beta;-D-glucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C33H54NO7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 576.7838</p>
            <p>smiles: [H][C@]12CC3[C@]4([H])CC=C5C[C@H](CC[C@]5(C)[C@@]4([H])CC[C@]3(C)C1[C@H](C)[C@@]1(CC[C@@H](C)C[NH2+]1)O2)O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O</p>
            <p>inchikey: XMLLJGHZPHTUKK-KJNRMUPVSA-O</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__13081_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C33H53NO7/c1-17-7-12-33(34-15-17)18(2)26-24(41-33)14-23-21-6-5-19-13-20(8-10-31(19,3)22(21)9-11-32(23,26)4)39-30-29(38)28(37)27(36)25(16-35)40-30/h5,17-18,20-30,34-38H,6-16H2,1-4H3/p+1/t17-,18+,20+,21-,22+,23?,24+,25-,26?,27-,28+,29-,30+,31+,32+,33-/m1/s1"/>
                </rdf:Bag>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__13080_c" id="M_CPD__45__13080_c" name="solasodine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C27H44NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 414.6432</p>
            <p>smiles: [H][C@]12C[C@@]3([H])[C@]4([H])CC=C5C[C@@H](O)CC[C@]5(C)[C@@]4([H])CC[C@]3(C)[C@@]1([H])[C@H](C)[C@@]1(CC[C@@H](C)C[NH2+]1)O2</p>
            <p>inchikey: KWVISVAMQJWJSZ-VKROHFNGSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__13080_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C27H43NO2/c1-16-7-12-27(28-15-16)17(2)24-23(30-27)14-22-20-6-5-18-13-19(29)8-10-25(18,3)21(20)9-11-26(22,24)4/h5,16-17,19-24,28-29H,6-15H2,1-4H3/p+1/t16-,17+,19+,20-,21+,22+,23+,24+,25+,26+,27-/m1/s1"/>
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      <species metaid="M_CPD__45__4161_c" id="M_CPD__45__4161_c" name="brassicasterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H46O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 398.6642</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])[C@]3([H])CC=C4C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)\C=C\[C@H](C)C(C)C</p>
            <p>inchikey: OILXMJHPFNGGTO-ZAUYPBDWSA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__4161_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C28H46O/c1-18(2)19(3)7-8-20(4)24-11-12-25-23-10-9-21-17-22(29)13-15-27(21,5)26(23)14-16-28(24,25)6/h7-9,18-20,22-26,29H,10-17H2,1-6H3/b8-7+/t19-,20+,22-,23-,24+,25-,26-,27-,28+/m0/s1"/>
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        </annotation>
      </species>
      <species metaid="M_cis__45__D19__45__37__45__OH__45__38__45__Me__45__C57__45__1__45__ACPs_c" id="M_cis__45__D19__45__37__45__OH__45__38__45__Me__45__C57__45__1__45__ACPs_c" name="a cis-delta19-37-hydroxy-38-methyl-C57:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_D__45__ERYTHRO__45__IMIDAZOLE__45__GLYCEROL__45__P_c" id="M_D__45__ERYTHRO__45__IMIDAZOLE__45__GLYCEROL__45__P_c" name="D-erythro-imidazole-glycerol-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H9N2O6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 236.1203</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)[C@@H](O)c1c[nH]cn1</p>
            <p>inchikey: HFYBTHCYPKEDQQ-RITPCOANSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_D__45__ERYTHRO__45__IMIDAZOLE__45__GLYCEROL__45__P_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H11N2O6P/c9-5(2-14-15(11,12)13)6(10)4-1-7-3-8-4/h1,3,5-6,9-10H,2H2,(H,7,8)(H2,11,12,13)/p-2/t5-,6+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__SERINE_c" id="M_D__45__SERINE_c" name="D-serine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 105.0926</p>
            <p>smiles: [NH3+][C@H](CO)C([O-])=O</p>
            <p>inchikey: MTCFGRXMJLQNBG-UWTATZPHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_D__45__SERINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DITP_c" id="M_DITP_c" name="dITP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O13P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 488.1368</p>
            <p>smiles: O[C@H]1C[C@@H](O[C@@H]1COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)n1cnc2c1nc[nH]c2=O</p>
            <p>inchikey: UFJPAQSLHAGEBL-RRKCRQDMSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DITP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H15N4O13P3/c15-5-1-7(14-4-13-8-9(14)11-3-12-10(8)16)25-6(5)2-24-29(20,21)27-30(22,23)26-28(17,18)19/h3-7,15H,1-2H2,(H,20,21)(H,22,23)(H,11,12,16)(H2,17,18,19)/p-4/t5-,6+,7+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_cis__45__delta13__45__3__45__hydroxylacceroyl__45__ACPs_c" id="M_cis__45__delta13__45__3__45__hydroxylacceroyl__45__ACPs_c" name="a cis-delta13-3-hydroxyC32:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__444_c" id="M_CPD__45__444_c" name="S-methyl-5-thio-&amp;alpha;-D-ribose 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O7PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.187</p>
            <p>smiles: CSC[C@H]1O[C@H](OP([O-])([O-])=O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: JTFITTQBRJDSTL-KVTDHHQDSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__444_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H13O7PS/c1-15-2-3-4(7)5(8)6(12-3)13-14(9,10)11/h3-8H,2H2,1H3,(H2,9,10,11)/p-2/t3-,4-,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIMP_c" id="M_DIMP_c" name="dIMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H11N4O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 330.1918</p>
            <p>smiles: O[C@H]1C[C@@H](O[C@@H]1COP([O-])([O-])=O)n1cnc2c1nc[nH]c2=O</p>
            <p>inchikey: PHNGFPPXDJJADG-RRKCRQDMSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H13N4O7P/c15-5-1-7(21-6(5)2-20-22(17,18)19)14-4-13-8-9(14)11-3-12-10(8)16/h3-7,15H,1-2H2,(H,11,12,16)(H2,17,18,19)/p-2/t5-,6+,7+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__1063_c" id="M_CPD__45__1063_c" name="5-(methylsulfanyl)-ribulose 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O7PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.187</p>
            <p>smiles: CSC[C@@H](O)[C@@H](O)C(=O)COP([O-])([O-])=O</p>
            <p>inchikey: CNSJRYUMVMWNMC-RITPCOANSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__1063_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H13O7PS/c1-15-3-5(8)6(9)4(7)2-13-14(10,11)12/h5-6,8-9H,2-3H2,1H3,(H2,10,11,12)/p-2/t5-,6+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_XANTHOSINE__45__5__45__PHOSPHATE_c" id="M_XANTHOSINE__45__5__45__PHOSPHATE_c" name="XMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H11N4O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 362.1906</p>
            <p>smiles: O[C@@H]1[C@@H](COP([O-])([O-])=O)O[C@H]([C@@H]1O)n1cnc2c1[nH]c(=O)[nH]c2=O</p>
            <p>inchikey: DCTLYFZHFGENCW-UUOKFMHZSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_XANTHOSINE__45__5__45__PHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H13N4O9P/c15-5-3(1-22-24(19,20)21)23-9(6(5)16)14-2-11-4-7(14)12-10(18)13-8(4)17/h2-3,5-6,9,15-16H,1H2,(H2,19,20,21)(H2,12,13,17,18)/p-2/t3-,5-,6-,9-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_XTP_c" id="M_XTP_c" name="XTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O15P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 520.1356</p>
            <p>smiles: O[C@@H]1[C@@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)O[C@H]([C@@H]1O)n1cnc2c1[nH]c(=O)[nH]c2=O</p>
            <p>inchikey: CAEFEWVYEZABLA-UUOKFMHZSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_XTP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H15N4O15P3/c15-5-3(1-26-31(22,23)29-32(24,25)28-30(19,20)21)27-9(6(5)16)14-2-11-4-7(14)12-10(18)13-8(4)17/h2-3,5-6,9,15-16H,1H2,(H,22,23)(H,24,25)(H2,19,20,21)(H2,12,13,17,18)/p-4/t3-,5-,6-,9-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Cis__45__delta__45__3__45__decenoyl__45__ACPs_c" id="M_Cis__45__delta__45__3__45__decenoyl__45__ACPs_c" name="a (3Z)-dec-3-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Trans__45__D2__45__decenoyl__45__ACPs_c" id="M_Trans__45__D2__45__decenoyl__45__ACPs_c" name="a (2E)-dec-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H17OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Proteins__45__with__45__incorrect__45__disulfides_c" id="M_Proteins__45__with__45__incorrect__45__disulfides_c" name="a protein with incorrect disulfide bonds" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Proteins__45__with__45__correct__45__disulfides_c" id="M_Proteins__45__with__45__correct__45__disulfides_c" name="a protein with correct disulfide bonds" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Ribonucleoside__45__Diphosphates_c" id="M_Ribonucleoside__45__Diphosphates_c" name="a ribonucleoside diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Deoxy__45__Ribonucleoside__45__Diphosphates_c" id="M_Deoxy__45__Ribonucleoside__45__Diphosphates_c" name="a 2&apos;-deoxyribonucleoside 5&apos;-diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C5H8O9P2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@H]1C[C@H]([*])O[C@@H]1COP([O-])(=O)OP([O-])([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_FE__43__3_e" id="M_FE__43__3_e" name="Fe3+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="3" fbc:chemicalFormula="Fe">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 55.843</p>
            <p>smiles: [Fe+3]</p>
            <p>inchikey: VTLYFUHAOXGGBS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FE__43__3_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Fe/q+3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_FERRICYTOCHROME__45__B5_C__45__BOUNDARY" id="M_FERRICYTOCHROME__45__B5_C__45__BOUNDARY" name="a ferricytochrome b5" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_FERRICYTOCHROME__45__B5_e" id="M_FERRICYTOCHROME__45__B5_e" name="a ferricytochrome b5" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_FERROCYTOCHROME__45__B5_C__45__BOUNDARY" id="M_FERROCYTOCHROME__45__B5_C__45__BOUNDARY" name="a ferrocytochrome b5" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_FERROCYTOCHROME__45__B5_e" id="M_FERROCYTOCHROME__45__B5_e" name="a ferrocytochrome b5" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_GDP_C__45__BOUNDARY" id="M_GDP_C__45__BOUNDARY" name="GDP" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 440.1783</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: QGWNDRXFNXRZMB-UUOKFMHZSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GDP_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/p-3/t3-,5-,6-,9-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GDP_e" id="M_GDP_e" name="GDP" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 440.1783</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: QGWNDRXFNXRZMB-UUOKFMHZSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GDP_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/p-3/t3-,5-,6-,9-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GTP_C__45__BOUNDARY" id="M_GTP_C__45__BOUNDARY" name="GTP" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O14P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 519.1509</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XKMLYUALXHKNFT-UUOKFMHZSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GTP_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N5O14P3/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(27-9)1-26-31(22,23)29-32(24,25)28-30(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H,24,25)(H2,19,20,21)(H3,11,13,14,18)/p-4/t3-,5-,6-,9-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GTP_e" id="M_GTP_e" name="GTP" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O14P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 519.1509</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XKMLYUALXHKNFT-UUOKFMHZSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GTP_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N5O14P3/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(27-9)1-26-31(22,23)29-32(24,25)28-30(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H,24,25)(H2,19,20,21)(H3,11,13,14,18)/p-4/t3-,5-,6-,9-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_HYDROGEN__45__PEROXIDE_C__45__BOUNDARY" id="M_HYDROGEN__45__PEROXIDE_C__45__BOUNDARY" name="hydrogen peroxide" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 34.0147</p>
            <p>smiles: [H]OO[H]</p>
            <p>inchikey: MHAJPDPJQMAIIY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HYDROGEN__45__PEROXIDE_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O2/c1-2/h1-2H"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2__45__DEHYDROPANTOATE_c" id="M_2__45__DEHYDROPANTOATE_c" name="2-dehydropantoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H9O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 145.1338</p>
            <p>smiles: CC(C)(CO)C(=O)C([O-])=O</p>
            <p>inchikey: PKVVTUWHANFMQC-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2__45__DEHYDROPANTOATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H10O4/c1-6(2,3-7)4(8)5(9)10/h7H,3H2,1-2H3,(H,9,10)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_HYDROGEN__45__PEROXIDE_e" id="M_HYDROGEN__45__PEROXIDE_e" name="hydrogen peroxide" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 34.0147</p>
            <p>smiles: [H]OO[H]</p>
            <p>inchikey: MHAJPDPJQMAIIY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HYDROGEN__45__PEROXIDE_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O2/c1-2/h1-2H"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_K__43___C__45__BOUNDARY" id="M_K__43___C__45__BOUNDARY" name="K+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="1" fbc:chemicalFormula="K">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 39.0978</p>
            <p>smiles: [K+]</p>
            <p>inchikey: NPYPAHLBTDXSSS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_K__43___C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/K/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_K__43___e" id="M_K__43___e" name="K+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="K">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 39.0978</p>
            <p>smiles: [K+]</p>
            <p>inchikey: NPYPAHLBTDXSSS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_K__43___e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/K/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Light_C__45__BOUNDARY" id="M_Light_C__45__BOUNDARY" name="h&amp;nu;" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: *</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Light_e" id="M_Light_e" name="h&amp;nu;" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: *</p>
          </body>
        </notes>
      </species>
      <species metaid="M_MG__43__2_C__45__BOUNDARY" id="M_MG__43__2_C__45__BOUNDARY" name="Mg2+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="2" fbc:chemicalFormula="Mg">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 24.304</p>
            <p>smiles: [Mg++]</p>
            <p>inchikey: JLVVSXFLKOJNIY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MG__43__2_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Mg/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DEHYDROQUINATE_c" id="M_DEHYDROQUINATE_c" name="3-dehydroquinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H9O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 189.1433</p>
            <p>smiles: O[C@@H]1C[C@@](O)(CC(=O)[C@H]1O)C([O-])=O</p>
            <p>inchikey: WVMWZWGZRAXUBK-SYTVJDICSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DEHYDROQUINATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H10O6/c8-3-1-7(13,6(11)12)2-4(9)5(3)10/h3,5,8,10,13H,1-2H2,(H,11,12)/p-1/t3-,5+,7-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MG__43__2_e" id="M_MG__43__2_e" name="Mg2+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Mg">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 24.304</p>
            <p>smiles: [Mg++]</p>
            <p>inchikey: JLVVSXFLKOJNIY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MG__43__2_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Mg/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MN__43__2_C__45__BOUNDARY" id="M_MN__43__2_C__45__BOUNDARY" name="Mn2+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="2" fbc:chemicalFormula="Mn">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 54.93695</p>
            <p>smiles: [Mn++]</p>
            <p>inchikey: WAEMQWOKJMHJLA-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MN__43__2_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Mn/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MN__43__2_e" id="M_MN__43__2_e" name="Mn2+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Mn">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 54.93695</p>
            <p>smiles: [Mn++]</p>
            <p>inchikey: WAEMQWOKJMHJLA-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MN__43__2_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Mn/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NA__43___C__45__BOUNDARY" id="M_NA__43___C__45__BOUNDARY" name="Na+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="1" fbc:chemicalFormula="Na">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 22.98922</p>
            <p>smiles: [Na+]</p>
            <p>inchikey: FKNQFGJONOIPTF-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NA__43___C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Na/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NA__43___e" id="M_NA__43___e" name="Na+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="Na">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 22.98922</p>
            <p>smiles: [Na+]</p>
            <p>inchikey: FKNQFGJONOIPTF-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NA__43___e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Na/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NAD_C__45__BOUNDARY" id="M_NAD_C__45__BOUNDARY" name="NAD+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 662.4177</p>
            <p>smiles: NC(=O)c1ccc[n+](c1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: BAWFJGJZGIEFAR-NNYOXOHSSA-M</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NAD_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__67_c" id="M_CPD__45__67_c" name="2-phosphoglycolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C2H2O6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 153.0091</p>
            <p>smiles: [O-]C(=O)COP([O-])([O-])=O</p>
            <p>inchikey: ASCFNMCAHFUBCO-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__67_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__17858_c" id="M_CPD__45__17858_c" name="&amp;omega;-saturated C55 dolichol phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C55H93O4P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 849.2994</p>
            <p>smiles: CC(C)CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CCC(C)CCOP([O-])([O-])=O</p>
            <p>inchikey: KTGSDHZXAKCYHM-LSTWDCEHSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__17858_c">
              <bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__17894_c" id="M_CPD__45__17894_c" name="&amp;beta;-D-mannosyl-(C55 &amp;omega;-saturated dolichyl phosphate)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C61H104O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1012.4474</p>
            <p>smiles: CC(C)CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CCC(C)CCOP([O-])(=O)O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: MBYVKTIIZNUHKN-NIVAAIEQSA-M</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        </annotation>
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      <species metaid="M_3Z__45__dodec__45__3__45__enoyl__45__ACPs_c" id="M_3Z__45__dodec__45__3__45__enoyl__45__ACPs_c" name="a (3Z)-dodec-3-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5Z__45__3__45__oxo__45__tetradec__45__5__45__enoyl__45__ACPs_c" id="M_5Z__45__3__45__oxo__45__tetradec__45__5__45__enoyl__45__ACPs_c" name="a (5Z)-3-oxo-tetradec-5-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3R__45__5Z__45__3__45__hydroxy__45__tetradec__45__5__45__enoyl__45__ACPs_c" id="M_3R__45__5Z__45__3__45__hydroxy__45__tetradec__45__5__45__enoyl__45__ACPs_c" name="a (3R,5Z)-3-hydroxy-tetradec-5-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2E__45__5Z__45__tetradeca__45__2__45__5__45__dienoyl__45__ACPs_c" id="M_2E__45__5Z__45__tetradeca__45__2__45__5__45__dienoyl__45__ACPs_c" name="a (2E,5Z)-tetradeca-2,5-dienoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5Z__45__tetradec__45__5__45__enoyl__45__ACPs_c" id="M_5Z__45__tetradec__45__5__45__enoyl__45__ACPs_c" name="a (5Z)-tetradec-5-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__661_c" id="M_CPD__45__661_c" name="propynoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3HO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 69.0394</p>
            <p>smiles: [O-]C(=O)C#C</p>
            <p>inchikey: UORVCLMRJXCDCP-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__661_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__15163_c" id="M_CPD__45__15163_c" name="prop-2-ynal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 54.0474</p>
            <p>smiles: O=CC#C</p>
            <p>inchikey: IJNJLGFTSIAHEA-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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      </species>
      <species metaid="M_D__45__GLUCURONOLACTONE_c" id="M_D__45__GLUCURONOLACTONE_c" name="D-glucurono-6,3-lactone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 176.1241</p>
            <p>smiles: [H][C@@]1(OC(=O)[C@@H](O)[C@H]1O)[C@@H](O)C=O</p>
            <p>inchikey: UYUXSRADSPPKRZ-SKNVOMKLSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_D__45__GLUCURONOLACTONE_c">
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      <species metaid="M_D__45__GLUCARATE_c" id="M_D__45__GLUCARATE_c" name="D-glucarate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H8O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 208.124</p>
            <p>smiles: O[C@@H]([C@H](O)[C@@H](O)C([O-])=O)[C@H](O)C([O-])=O</p>
            <p>inchikey: DSLZVSRJTYRBFB-LLEIAEIESA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_D__45__GLUCARATE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_1__45__INDANOL_c" id="M_1__45__INDANOL_c" name="1-indanol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H10O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 134.1751</p>
            <p>smiles: OC1CCc2ccccc12</p>
            <p>inchikey: YIAPLDFPUUJILH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_1__45__INDANOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_1__45__INDANONE_c" id="M_1__45__INDANONE_c" name="indanone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H8O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 132.1592</p>
            <p>smiles: O=C1CCc2ccccc12</p>
            <p>inchikey: QNXSIUBBGPHDDE-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_1__45__INDANONE_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_NAD_e" id="M_NAD_e" name="NAD+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 662.4177</p>
            <p>smiles: NC(=O)c1ccc[n+](c1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: BAWFJGJZGIEFAR-NNYOXOHSSA-M</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NAD_e">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_3__45__KETO__45__ADIPYL__45__COA_c" id="M_3__45__KETO__45__ADIPYL__45__COA_c" name="3-oxoadipyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C27H37N7O20P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 904.607</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CC(=O)CCC([O-])=O</p>
            <p>inchikey: VKKKAAPGXHWXOO-BIEWRJSYSA-I</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_3__45__KETO__45__ADIPYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NAD__45__P__45__OR__45__NOP_C__45__BOUNDARY" id="M_NAD__45__P__45__OR__45__NOP_C__45__BOUNDARY" name="NAD(P)+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_HYPOXANTHINE_c" id="M_HYPOXANTHINE_c" name="hypoxanthine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 136.1115</p>
            <p>smiles: O=c1[nH]cnc2nc[nH]c12</p>
            <p>inchikey: FDGQSTZJBFJUBT-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HYPOXANTHINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H4N4O/c10-5-3-4(7-1-6-3)8-2-9-5/h1-2H,(H2,6,7,8,9,10)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_NAD__45__P__45__OR__45__NOP_e" id="M_NAD__45__P__45__OR__45__NOP_e" name="NAD(P)+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_NADH_C__45__BOUNDARY" id="M_NADH_C__45__BOUNDARY" name="NADH" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 663.4262</p>
            <p>smiles: NC(=O)C1=CN(C=CC1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: BOPGDPNILDQYTO-NNYOXOHSSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NADH_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NADH_e" id="M_NADH_e" name="NADH" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 663.4262</p>
            <p>smiles: NC(=O)C1=CN(C=CC1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: BOPGDPNILDQYTO-NNYOXOHSSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NADH_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C21H29N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1,3-4,7-8,10-11,13-16,20-21,29-32H,2,5-6H2,(H2,23,33)(H,34,35)(H,36,37)(H2,22,24,25)/p-2/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Very__45__Long__45__Chain__45__oxoacyl__45__CoAs_c" id="M_Very__45__Long__45__Chain__45__oxoacyl__45__CoAs_c" name="a very-long-chain oxoacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_NADH__45__P__45__OR__45__NOP_C__45__BOUNDARY" id="M_NADH__45__P__45__OR__45__NOP_C__45__BOUNDARY" name="NAD(P)H" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Very__45__long__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" id="M_Very__45__long__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" name="a very-long-chain 2,3,4-saturated fatty acyl CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H37N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CCC[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_NADH__45__P__45__OR__45__NOP_e" id="M_NADH__45__P__45__OR__45__NOP_e" name="NAD(P)H" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_NADP_C__45__BOUNDARY" id="M_NADP_C__45__BOUNDARY" name="NADP+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-3" fbc:chemicalFormula="C21H25N7O17P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 740.3828</p>
            <p>smiles: NC(=O)c1ccc[n+](c1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](OP([O-])([O-])=O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XJLXINKUBYWONI-NNYOXOHSSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NADP_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/p-3/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_b__45__Keto__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" id="M_b__45__Keto__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" name="a (5Z)-3-oxododec-5-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_NADPH_C__45__BOUNDARY" id="M_NADPH_C__45__BOUNDARY" name="NADPH" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-4" fbc:chemicalFormula="C21H26N7O17P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 741.3913</p>
            <p>smiles: NC(=O)C1=CN(C=CC1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](OP([O-])([O-])=O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: ACFIXJIJDZMPPO-NNYOXOHSSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NADPH_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_b__45__Hydroxy__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" id="M_b__45__Hydroxy__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" name="a (3R,5Z)-3-hydroxydodec-5-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Very__45__Long__45__Chain__45__3__45__Hydroxyacyl__45__CoAs_c" id="M_Very__45__Long__45__Chain__45__3__45__Hydroxyacyl__45__CoAs_c" name="a very-long-chain (3R)-3-hydroxyacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_NITRATE_C__45__BOUNDARY" id="M_NITRATE_C__45__BOUNDARY" name="nitrate" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-1" fbc:chemicalFormula="NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 62.0054</p>
            <p>smiles: [O-][N+]([O-])=O</p>
            <p>inchikey: NHNBFGGVMKEFGY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NITRATE_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/NO3/c2-1(3)4/q-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Trans__45__D3__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" id="M_Trans__45__D3__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" name="a (3E,5Z)-dodeca-3,5-dienoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_OXYGEN__45__MOLECULE_C__45__BOUNDARY" id="M_OXYGEN__45__MOLECULE_C__45__BOUNDARY" name="oxygen" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0" fbc:chemicalFormula="O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 31.9988</p>
            <p>smiles: O=O</p>
            <p>inchikey: MYMOFIZGZYHOMD-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OXYGEN__45__MOLECULE_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/O2/c1-2"/>
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              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Very__45__Long__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" id="M_Very__45__Long__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" name="a very-long-chain trans-2,3-dehydroacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PPI_C__45__BOUNDARY" id="M_PPI_C__45__BOUNDARY" name="diphosphate" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-3" fbc:chemicalFormula="HO7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.9529</p>
            <p>smiles: OP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: XPPKVPWEQAFLFU-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PPI_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)/p-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Oxo__45__glutarate__45__dehydrogenase__45__DH__45__lipoyl_c" id="M_Oxo__45__glutarate__45__dehydrogenase__45__DH__45__lipoyl_c" name="a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15OS2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_PROTON_C__45__BOUNDARY" id="M_PROTON_C__45__BOUNDARY" name="H+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="1" fbc:chemicalFormula="H">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1.00739</p>
            <p>smiles: [H+]</p>
            <p>inchikey: GPRLSGONYQIRFK-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PROTON_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/p+1"/>
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              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_Pi_C__45__BOUNDARY" id="M_Pi_C__45__BOUNDARY" name="phosphate" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-2" fbc:chemicalFormula="HO4P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 95.9804</p>
            <p>smiles: OP([O-])([O-])=O</p>
            <p>inchikey: NBIIXXVUZAFLBC-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_Pi_C__45__BOUNDARY">
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              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_SULFATE_C__45__BOUNDARY" id="M_SULFATE_C__45__BOUNDARY" name="sulfate" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-2" fbc:chemicalFormula="O4S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 96.064</p>
            <p>smiles: [O-]S([O-])(=O)=O</p>
            <p>inchikey: QAOWNCQODCNURD-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SULFATE_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)/p-2"/>
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        </annotation>
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      <species metaid="M_tRNA__45__Sec_c" id="M_tRNA__45__Sec_c" name="a tRNAsec" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_GLUTAMATE__45__1__45__SEMIALDEHYDE_c" id="M_GLUTAMATE__45__1__45__SEMIALDEHYDE_c" name="(S)-4-amino-5-oxopentanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 131.1299</p>
            <p>smiles: [H]C(=O)[C@@H]([NH3+])CCC([O-])=O</p>
            <p>inchikey: MPUUQNGXJSEWTF-BYPYZUCNSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 560.8048</p>
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        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 131.1299</p>
            <p>smiles: O[C@H]1C[NH2+][C@@H](C1)C([O-])=O</p>
            <p>inchikey: PMMYEEVYMWASQN-DMTCNVIQSA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_4__45__HYDROXY__45__L__45__PROLINE_c">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 412.6908</p>
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            <p>inchikey: HCXVJBMSMIARIN-PHZDYDNGSA-N</p>
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        <annotation>
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      <species metaid="M_PYRROLINE__45__HYDROXY__45__CARBOXYLATE_c" id="M_PYRROLINE__45__HYDROXY__45__CARBOXYLATE_c" name="(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H6NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 128.1066</p>
            <p>smiles: O[C@@H]1C[C@H](N=C1)C([O-])=O</p>
            <p>inchikey: WFOFKRKDDKGRIK-DMTCNVIQSA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 574.8314</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 548.7941</p>
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      <species metaid="M_CPD__45__4143_c" id="M_CPD__45__4143_c" name="sitosterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H50O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 414.7067</p>
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        <notes>
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            <p>mass: 576.8473</p>
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      <species metaid="M_GLC__45__6__45__P_c" id="M_GLC__45__6__45__P_c" name="&amp;beta;-D-glucose 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
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            <p>mass: 258.121</p>
            <p>smiles: O[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H](O)[C@H]1O</p>
            <p>inchikey: NBSCHQHZLSJFNQ-VFUOTHLCSA-L</p>
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      <species metaid="M_Maltodextrins_c" id="M_Maltodextrins_c" name="a maltodextrin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD__45__2743_c" id="M_CPD__45__2743_c" name="nicotine-1&apos;-N-oxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H14N2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 178.231</p>
            <p>smiles: C[N+]1([O-])CCCC1c1cccnc1</p>
            <p>inchikey: RWFBQHICRCUQJJ-UHFFFAOYSA-N</p>
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        </notes>
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      <species metaid="M_CPD__45__17637_c" id="M_CPD__45__17637_c" name="7-hydroxylaurate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H23O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 215.3098</p>
            <p>smiles: CCCCCC(O)CCCCCC([O-])=O</p>
            <p>inchikey: BNWKMHUFFKDAMV-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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        </annotation>
      </species>
      <species metaid="M_Phenolic__45__Donors_c" id="M_Phenolic__45__Donors_c" name="a phenolic donor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Phenoxyl__45__rad__45__of__45__phenolic__45__donors_c" id="M_Phenoxyl__45__rad__45__of__45__phenolic__45__donors_c" name="a phenoxyl radical of a phenolic donor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Negatively__45__super__45__coiled__45__DNAs_c" id="M_Negatively__45__super__45__coiled__45__DNAs_c" name="a negatively supercoiled DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Relaxed__45__DNAs_c" id="M_Relaxed__45__DNAs_c" name="a relaxed DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_3R__45__7Z__45__3__45__hydroxy__45__hexadec__45__7__45__enoyl__45__ACPs_c" id="M_3R__45__7Z__45__3__45__hydroxy__45__hexadec__45__7__45__enoyl__45__ACPs_c" name="a (3R,7Z)-3-hydroxy-hexadec-7-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3__45__oxo__45__D5__45__steroids_c" id="M_3__45__oxo__45__D5__45__steroids_c" name="a 3-oxo-&amp;delta;5-steroid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2E__45__7Z__45__hexadeca__45__2__45__7__45__dienoyl__45__ACPs_c" id="M_2E__45__7Z__45__hexadeca__45__2__45__7__45__dienoyl__45__ACPs_c" name="a (2E,7Z)-hexadeca-2,7-dienoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__335_c" id="M_CPD__45__335_c" name="(R)-3-hydroxybutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H7O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 103.0971</p>
            <p>smiles: C[C@@H](O)CC([O-])=O</p>
            <p>inchikey: WHBMMWSBFZVSSR-GSVOUGTGSA-M</p>
          </body>
        </notes>
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      <species metaid="M_3__45__KETOBUTYRATE_c" id="M_3__45__KETOBUTYRATE_c" name="acetoacetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 101.0812</p>
            <p>smiles: CC(=O)CC([O-])=O</p>
            <p>inchikey: WDJHALXBUFZDSR-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_3__45__KETOBUTYRATE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_Deoxy__45__Ribonucleoside__45__Triphosphates_c" id="M_Deoxy__45__Ribonucleoside__45__Triphosphates_c" name="a 2&apos;-deoxyribonucleoside 5&apos;-triphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C5H8O12P3R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@H]1C[C@H]([*])O[C@@H]1COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_3b__45__hydroxy__45__D5__45__steroids_c" id="M_3b__45__hydroxy__45__D5__45__steroids_c" name="a 3&amp;beta;-hydroxy-&amp;delta;5-steroid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_7Z__45__hexadec__45__7__45__enoyl__45__ACPs_c" id="M_7Z__45__hexadec__45__7__45__enoyl__45__ACPs_c" name="a (7Z)-hexadec-7-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_9Z__45__3__45__oxo__45__octadec__45__9__45__enoyl__45__ACPs_c" id="M_9Z__45__3__45__oxo__45__octadec__45__9__45__enoyl__45__ACPs_c" name="a (9Z)-3-oxo-octadec-9-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_S__45__3__45__HYDROXYBUTANOYL__45__COA_c" id="M_S__45__3__45__HYDROXYBUTANOYL__45__COA_c" name="(S)-3-hydroxybutanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H38N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 849.594</p>
            <p>smiles: C[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
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        </notes>
        <annotation>
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      <species metaid="M_DNA__45__N_c" id="M_DNA__45__N_c" name="DNAn" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_3R__45__9Z__45__3__45__hydroxy__45__octadec__45__9__45__enoyl__45__ACPs_c" id="M_3R__45__9Z__45__3__45__hydroxy__45__octadec__45__9__45__enoyl__45__ACPs_c" name="a (3R,9Z)-3-hydroxy-octadec-9-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Long__45__Chain__45__oxoacyl__45__CoAs_c" id="M_Long__45__Chain__45__oxoacyl__45__CoAs_c" name="a long-chain 3-oxoacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_THIAMINE_C__45__BOUNDARY" id="M_THIAMINE_C__45__BOUNDARY" name="thiamine" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="1" fbc:chemicalFormula="C12H17N4OS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 265.354</p>
            <p>smiles: Cc1c(CCO)sc[n+]1Cc1cnc(C)nc1N</p>
            <p>inchikey: JZRWCGZRTZMZEH-UHFFFAOYSA-N</p>
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      <species metaid="M_UDP_C__45__BOUNDARY" id="M_UDP_C__45__BOUNDARY" name="UDP" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H11N2O12P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 401.139</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP([O-])(=O)OP([O-])([O-])=O)n1ccc(=O)[nH]c1=O</p>
            <p>inchikey: XCCTYIAWTASOJW-XVFCMESISA-K</p>
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      <species metaid="M_WATER_C__45__BOUNDARY" id="M_WATER_C__45__BOUNDARY" name="H2O" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 18.0153</p>
            <p>smiles: [H]O[H]</p>
            <p>inchikey: XLYOFNOQVPJJNP-UHFFFAOYSA-N</p>
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        </notes>
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H2O/h1H2"/>
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      <species metaid="M_ZN__43__2_C__45__BOUNDARY" id="M_ZN__43__2_C__45__BOUNDARY" name="ZN+2" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="2" fbc:chemicalFormula="Zn">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 65.408</p>
            <p>smiles: [Zn++]</p>
            <p>inchikey: PTFCDOFLOPIGGS-UHFFFAOYSA-N</p>
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        </notes>
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            <rdf:Description rdf:about="#M_ZN__43__2_C__45__BOUNDARY">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Zn/q+2"/>
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      <species metaid="M_BIOMASS_C__45__BOUNDARY" id="M_BIOMASS_C__45__BOUNDARY" name="BIOMASS" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_FRUCTOSE__45__16__45__DIPHOSPHATE_c" id="M_FRUCTOSE__45__16__45__DIPHOSPHATE_c" name="&amp;beta;-D-fructose 1,6-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 336.0861</p>
            <p>smiles: O[C@H]1[C@H](O)[C@](O)(COP([O-])([O-])=O)O[C@@H]1COP([O-])([O-])=O</p>
            <p>inchikey: RNBGYGVWRKECFJ-ZXXMMSQZSA-J</p>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CREATINE_c" id="M_CREATINE_c" name="creatine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9N3O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 131.1332</p>
            <p>smiles: CN(CC([O-])=O)C(N)=[NH2+]</p>
            <p>inchikey: CVSVTCORWBXHQV-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CREATINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H9N3O2/c1-7(4(5)6)2-3(8)9/h2H2,1H3,(H3,5,6)(H,8,9)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CREATINE__45__P_c" id="M_CREATINE__45__P_c" name="N&amp;omega;-phosphocreatine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H8N3O5P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 209.0983</p>
            <p>smiles: CN(CC([O-])=O)C(=[NH2+])NP([O-])([O-])=O</p>
            <p>inchikey: DRBBFCLWYRJSJZ-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CREATINE__45__P_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__seryl__45__SEC__45__tRNAs_c" id="M_L__45__seryl__45__SEC__45__tRNAs_c" name="an L-seryl-[tRNAsec]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__710_c" id="M_CPD__45__710_c" name="campestanol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H50O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 402.696</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])[C@]3([H])CC[C@@]4([H])C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CC[C@@H](C)C(C)C</p>
            <p>inchikey: ARYTXMNEANMLMU-ATEDBJNTSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__710_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__712_c" id="M_CPD__45__712_c" name="6-deoxocathasterone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H50O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 418.6954</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])[C@]3([H])CC[C@@]4([H])C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)[C@@H](O)C[C@@H](C)C(C)C</p>
            <p>inchikey: ZHZKWZJLUNXOSN-YUZBOUAZSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__712_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C28H50O2/c1-17(2)18(3)15-26(30)19(4)23-9-10-24-22-8-7-20-16-21(29)11-13-27(20,5)25(22)12-14-28(23,24)6/h17-26,29-30H,7-16H2,1-6H3/t18-,19+,20+,21+,22+,23-,24+,25+,26+,27+,28-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_ISOVALERYL__45__COA_c" id="M_ISOVALERYL__45__COA_c" name="isovaleryl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H40N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 847.621</p>
            <p>smiles: CC(C)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: UYVZIWWBJMYRCD-ZMHDXICWSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ISOVALERYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__METHYL__45__CROTONYL__45__COA_c" id="M_3__45__METHYL__45__CROTONYL__45__COA_c" name="3-methylcrotonyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H38N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 845.605</p>
            <p>smiles: CC(C)=CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: BXIPALATIYNHJN-ZMHDXICWSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__METHYL__45__CROTONYL__45__COA_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD0__45__2231_c" id="M_CPD0__45__2231_c" name="dIDP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H11N4O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 409.1643</p>
            <p>smiles: O[C@H]1C[C@@H](O[C@@H]1COP([O-])(=O)OP([O-])([O-])=O)n1cnc2c1nc[nH]c2=O</p>
            <p>inchikey: BKUSIKGSPSFQAC-RRKCRQDMSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD0__45__2231_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_INDOLE_c" id="M_INDOLE_c" name="indole" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 117.1479</p>
            <p>smiles: c1cc2ccccc2[nH]1</p>
            <p>inchikey: SIKJAQJRHWYJAI-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_INDOLE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_DELTA1__45__PIPERIDEINE__45__2__45__6__45__DICARBOXYLATE_c" id="M_DELTA1__45__PIPERIDEINE__45__2__45__6__45__DICARBOXYLATE_c" name="(S)-2,3,4,5-tetrahydrodipicolinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H7NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 169.1359</p>
            <p>smiles: [O-]C(=O)[C@@H]1CCCC(=N1)C([O-])=O</p>
            <p>inchikey: CXMBCXQHOXUCEO-BYPYZUCNSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_DELTA1__45__PIPERIDEINE__45__2__45__6__45__DICARBOXYLATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__7066_c" id="M_CPD__45__7066_c" name="(2R,3S)-3-methylmalate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H6O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 146.0992</p>
            <p>smiles: C[C@@H]([C@@H](O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: NPYQJIHHTGFBLN-STHAYSLISA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__7066_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__12724_c" id="M_CPD__45__12724_c" name="baicalein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H9O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 269.2295</p>
            <p>smiles: Oc1c([O-])cc2oc(cc(=O)c2c1O)-c1ccccc1</p>
            <p>inchikey: FXNFHKRTJBSTCS-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__12724_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_RX_c" id="M_RX_c" name="RX" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="RX">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]*</p>
          </body>
        </notes>
      </species>
      <species metaid="M_S__45__Substituted__45__Glutathione_c" id="M_S__45__Substituted__45__Glutathione_c" name="a glutathione-S-conjugate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H15N3O6SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CS[*])C(=O)NCC([O-])=O)C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_HX_c" id="M_HX_c" name="HX" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [F,Cl,Br,I-]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_1__45__CHLORO__45__24__45__DINITROBENZENE_c" id="M_1__45__CHLORO__45__24__45__DINITROBENZENE_c" name="1-chloro-2,4-dinitrobenzene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H3ClN2O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 202.552</p>
            <p>smiles: [O-][N+](=O)c1ccc(Cl)c(c1)[N+]([O-])=O</p>
            <p>inchikey: VYZAHLCBVHPDDF-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_1__45__CHLORO__45__24__45__DINITROBENZENE_c">
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        </annotation>
      </species>
      <species metaid="M_S__45__24__45__DINITROPHENYLGLUTATHIONE_c" id="M_S__45__24__45__DINITROPHENYLGLUTATHIONE_c" name="2,4-dinitrophenyl-S-glutathione" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C16H18N5O10S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 472.407</p>
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CSc1ccc(cc1[N+]([O-])=O)[N+]([O-])=O)C(=O)NCC([O-])=O)C([O-])=O</p>
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        </annotation>
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      <species metaid="M_CL__45___c" id="M_CL__45___c" name="chloride" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="Cl">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 35.454</p>
            <p>smiles: [Cl-]</p>
            <p>inchikey: VEXZGXHMUGYJMC-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CL__45___c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/ClH/h1H/p-1"/>
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      <species metaid="M_CPD__45__2744_c" id="M_CPD__45__2744_c" name="nicotine-glucuronide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C16H23N2O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 339.3631</p>
            <p>smiles: [H][C@]1(CCC[NH+]1C)c1ccc[n+](c1)[C@H]1O[C@@H]([C@@H](O)[C@H](O)[C@H]1O)C([O-])=O</p>
            <p>inchikey: SAWAIULJDYFLPD-SOAFEQHCSA-O</p>
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        </notes>
        <annotation>
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      <species metaid="M_DOPAMINE_c" id="M_DOPAMINE_c" name="dopamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C8H12NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 154.1858</p>
            <p>smiles: [NH3+]CCc1ccc(O)c(O)c1</p>
            <p>inchikey: VYFYYTLLBUKUHU-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_DOPAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H11NO2/c9-4-3-6-1-2-7(10)8(11)5-6/h1-2,5,10-11H,3-4,9H2/p+1"/>
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      <species metaid="M_34__45__DIHYDROXYPHENYLACETALDEHYDE_c" id="M_34__45__DIHYDROXYPHENYLACETALDEHYDE_c" name="3,4-dihydroxyphenylacetaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H8O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 152.1473</p>
            <p>smiles: [H]C(=O)Cc1ccc(O)c(O)c1</p>
            <p>inchikey: IADQVXRMSNIUEL-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_34__45__DIHYDROXYPHENYLACETALDEHYDE_c">
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      <species metaid="M_CPD__45__782_c" id="M_CPD__45__782_c" name="3,4-dihydroxyphenylacetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H7O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 167.1393</p>
            <p>smiles: Oc1ccc(CC([O-])=O)cc1O</p>
            <p>inchikey: CFFZDZCDUFSOFZ-UHFFFAOYSA-M</p>
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      <species metaid="M_CPD__45__17638_c" id="M_CPD__45__17638_c" name="7-hydroxylauroyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C33H54N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 961.806</p>
            <p>smiles: CCCCCC(O)CCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: RXEDUSGPUQQZEW-XIRPNGCASA-J</p>
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        </notes>
        <annotation>
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      <species metaid="M_3__45__P__45__HYDROXYPYRUVATE_c" id="M_3__45__P__45__HYDROXYPYRUVATE_c" name="3-phosphooxypyruvate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C3H2O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 181.0192</p>
            <p>smiles: [O-]C(=O)C(=O)COP([O-])([O-])=O</p>
            <p>inchikey: LFLUCDOSQPJJBE-UHFFFAOYSA-K</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_L__45__1__45__PHOSPHATIDYL__45__GLYCEROL_c" id="M_L__45__1__45__PHOSPHATIDYL__45__GLYCEROL_c" name="an L-1-phosphatidyl-sn-glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_MEVALONATE_c" id="M_MEVALONATE_c" name="(R)-mevalonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H11O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 147.1497</p>
            <p>smiles: C[C@@](O)(CCO)CC([O-])=O</p>
            <p>inchikey: KJTLQQUUPVSXIM-ZCFIWIBFSA-M</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_MEVALONATE_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O4/c1-6(10,2-3-7)4-5(8)9/h7,10H,2-4H2,1H3,(H,8,9)/p-1/t6-/m1/s1"/>
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      <species metaid="M_FERULIC__45__ACID_c" id="M_FERULIC__45__ACID_c" name="ferulate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H9O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 193.1766</p>
            <p>smiles: COc1cc(\C=C\C([O-])=O)ccc1O</p>
            <p>inchikey: KSEBMYQBYZTDHS-HWKANZROSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_FERULIC__45__ACID_c">
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      </species>
      <species metaid="M_3__45__HYDROXY__45__3__45__METHYL__45__GLUTARYL__45__COA_c" id="M_3__45__HYDROXY__45__3__45__METHYL__45__GLUTARYL__45__COA_c" name="(S)-3-hydroxy-3-methylglutaryl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C27H39N7O20P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 906.622</p>
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            <p>inchikey: CABVTRNMFUVUDM-VRHQGPGLSA-I</p>
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        </notes>
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      <species metaid="M_Detyrosinated__45__alpha__45____45__tubulins_c" id="M_Detyrosinated__45__alpha__45____45__tubulins_c" name="detyrosinated &amp;alpha;-tubulin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Alpha__45__tubulins_c" id="M_Alpha__45__tubulins_c" name="&amp;alpha;-tubulin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_2E__45__9Z__45__octadeca__45__2__45__9__45__dienoyl__45__ACPs_c" id="M_2E__45__9Z__45__octadeca__45__2__45__9__45__dienoyl__45__ACPs_c" name="a (2E,9Z)-octadeca-2,9-dienoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Oleoyl__45__ACPs_c" id="M_Oleoyl__45__ACPs_c" name="an oleoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C29H53N2O8PRS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_11Z__45__3__45__oxo__45__icos__45__11__45__enoyl__45__ACPs_c" id="M_11Z__45__3__45__oxo__45__icos__45__11__45__enoyl__45__ACPs_c" name="an (11Z)-3-oxo-icos-11-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CYCLOEUCALENOL_c" id="M_CYCLOEUCALENOL_c" name="cycloeucalenol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H50O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 426.7174</p>
            <p>smiles: [H][C@@]12CC[C@]3([H])[C@@]4(C[C@]14CC[C@H](O)[C@H]2C)CC[C@]1(C)[C@H](CC[C@@]31C)[C@H](C)CCC(=C)C(C)C</p>
            <p>inchikey: HUNLTIZKNQDZEI-PGFZVWMDSA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CYCLOEUCALENOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_OBTUSIFOLIOL_c" id="M_OBTUSIFOLIOL_c" name="obtusifoliol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H50O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 426.7174</p>
            <p>smiles: CC(C)C(=C)CC[C@@H](C)[C@H]1CC[C@@]2(C)C3=C(CC[C@]12C)[C@@]1(C)CC[C@H](O)[C@@H](C)C1CC3</p>
            <p>inchikey: MMNYKQIDRZNIKT-YLANKJTKSA-N</p>
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        <annotation>
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            <rdf:Description rdf:about="#M_OBTUSIFOLIOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C30H50O/c1-19(2)20(3)9-10-21(4)23-13-17-30(8)26-12-11-24-22(5)27(31)15-16-28(24,6)25(26)14-18-29(23,30)7/h19,21-24,27,31H,3,9-18H2,1-2,4-8H3/t21-,22+,23-,24?,27+,28+,29-,30+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3R__45__11Z__45__3__45__hydroxy__45__icos__45__11__45__enoyl__45__ACPs_c" id="M_3R__45__11Z__45__3__45__hydroxy__45__icos__45__11__45__enoyl__45__ACPs_c" name="a (3R,11Z)-3-hydroxy-icos-11-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2E__45__11Z__45__icosa__45__2__45__11__45__dienoyl__45__ACPs_c" id="M_2E__45__11Z__45__icosa__45__2__45__11__45__dienoyl__45__ACPs_c" name="an (2E,11Z)-icosa-2,11-dienoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_FMN_c" id="M_FMN_c" name="FMN" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C17H18N4O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 453.3216</p>
            <p>smiles: Cc1cc2nc3c(nc(=O)[n-]c3=O)n(C[C@H](O)[C@H](O)[C@H](O)COP([O-])([O-])=O)c2cc1C</p>
            <p>inchikey: ANKZYBDXHMZBDK-SCRDCRAPSA-K</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_FMN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H3,20,25,26,27,28,29)/p-3/t11-,12+,14-/m0/s1"/>
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        </annotation>
      </species>
      <species metaid="M_OH__45__ACYL__45__ACP_c" id="M_OH__45__ACYL__45__ACP_c" name="a (3R)-3-hydroxyacyl-[acyl-carrier protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__6994_c" id="M_CPD__45__6994_c" name="(2S)-eriodictyol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 288.2522</p>
            <p>smiles: Oc1cc(O)c2C(=O)C[C@H](Oc2c1)c1ccc(O)c(O)c1</p>
            <p>inchikey: SBHXYTNGIZCORC-ZDUSSCGKSA-N</p>
          </body>
        </notes>
        <annotation>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__474_c" id="M_CPD__45__474_c" name="(+)-taxifolin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 304.2516</p>
            <p>smiles: O[C@@H]1[C@H](Oc2cc(O)cc(O)c2C1=O)c1ccc(O)c(O)c1</p>
            <p>inchikey: CXQWRCVTCMQVQX-LSDHHAIUSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD__45__12175_c" id="M_CPD__45__12175_c" name="(S)-3-hydroxy-isobutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H7O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 103.0971</p>
            <p>smiles: C[C@@H](CO)C([O-])=O</p>
            <p>inchikey: DBXBTMSZEOQQDU-VKHMYHEASA-M</p>
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        </notes>
        <annotation>
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      <species metaid="M_CH3__45__MALONATE__45__S__45__ALD_c" id="M_CH3__45__MALONATE__45__S__45__ALD_c" name="(S)-methylmalonate-semialdehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 101.0812</p>
            <p>smiles: C[C@@H](C=O)C([O-])=O</p>
            <p>inchikey: VOKUMXABRRXHAR-VKHMYHEASA-M</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CH3__45__MALONATE__45__S__45__ALD_c">
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      <species metaid="M_CPD__45__7088_c" id="M_CPD__45__7088_c" name="(2R,3S,4S)-leucodelphinidin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H14O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 322.2669</p>
            <p>smiles: O[C@H]1[C@@H](O)c2c(O)cc(O)cc2O[C@@H]1c1cc(O)c(O)c(O)c1</p>
            <p>inchikey: ZEACOKJOQLAYTD-SOUVJXGZSA-N</p>
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        <annotation>
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      <species metaid="M_CPD__45__13612_c" id="M_CPD__45__13612_c" name="CPD-13612" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C18H40NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 302.5152</p>
            <p>smiles: CCCCCCCCCCCCCCC[C@@H](O)[C@@H]([NH3+])CO</p>
            <p>inchikey: OTKJDMGTUTTYMP-ZWKOTPCHSA-O</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_CPD3DJ__45__82_c" id="M_CPD3DJ__45__82_c" name="CPD3DJ-82" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H38NO3R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCCCC[C@@H](O)[C@H](CO)NC([*])=O</p>
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        </notes>
      </species>
      <species metaid="M_CPD__45__7100_c" id="M_CPD__45__7100_c" name="(2S)-2-isopropyl-3-oxosuccinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H8O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 172.1365</p>
            <p>smiles: CC(C)[C@H](C([O-])=O)C(=O)C([O-])=O</p>
            <p>inchikey: HIIZAGQWABAMRR-BYPYZUCNSA-L</p>
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      <species metaid="M_PELARGONIDIN__45__3__45__GLUCOSIDE__45__CMPD_c" id="M_PELARGONIDIN__45__3__45__GLUCOSIDE__45__CMPD_c" name="pelargonidin-3-O-&amp;beta;-D-glucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H20O10">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 432.3775</p>
            <p>smiles: OC[C@H]1O[C@@H](Oc2cc3c([O-])cc(O)cc3[o+]c2-c2ccc(O)cc2)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: ABVCUBUIXWJYSE-GQUPQBGVSA-N</p>
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        <annotation>
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            <rdf:Description rdf:about="#M_PELARGONIDIN__45__3__45__GLUCOSIDE__45__CMPD_c">
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      </species>
      <species metaid="M_CPD__45__7137_c" id="M_CPD__45__7137_c" name="pelargonidin-3,5-di-O-&amp;beta;-D-glucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H30O15">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 594.5181</p>
            <p>smiles: OC[C@H]1O[C@@H](Oc2cc3c(O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O)cc([O-])cc3[o+]c2-c2ccc(O)cc2)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: SLCKJKWFULXZBD-ZOTFFYTFSA-N</p>
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        <annotation>
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      </species>
      <species metaid="M_Nucleoside__45__Triphosphates_c" id="M_Nucleoside__45__Triphosphates_c" name="a nucleoside triphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C5H8O13P3R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@@H]1[C@H](O)[C@@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)O[C@H]1[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__15172_c" id="M_CPD__45__15172_c" name="6,7-dehydrobaicalein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H7O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 267.2136</p>
            <p>smiles: [O-]C1=c2c(=O)cc(oc2=CC(=O)C1=O)-c1ccccc1</p>
            <p>inchikey: LSQWCIYRGVWPFX-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15172_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C15H8O5/c16-9-6-11(8-4-2-1-3-5-8)20-12-7-10(17)14(18)15(19)13(9)12/h1-7,19H/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIAMINO__45__OH__45__PHOSPHORIBOSYLAMINO__45__PYR_c" id="M_DIAMINO__45__OH__45__PHOSPHORIBOSYLAMINO__45__PYR_c" name="2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H14N5O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 351.211</p>
            <p>smiles: Nc1nc(O)c(N)c(N[C@@H]2O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]2O)n1</p>
            <p>inchikey: OCLCLRXKNJCOJD-UMMCILCDSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIAMINO__45__OH__45__PHOSPHORIBOSYLAMINO__45__PYR_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H16N5O8P/c10-3-6(13-9(11)14-7(3)17)12-8-5(16)4(15)2(22-8)1-21-23(18,19)20/h2,4-5,8,15-16H,1,10H2,(H2,18,19,20)(H4,11,12,13,14,17)/p-2/t2-,4-,5-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GDP__45__TP_c" id="M_GDP__45__TP_c" name="pppGpp" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-6" fbc:chemicalFormula="C10H12N5O20P5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 677.0959</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)[C@@H](OP([O-])(=O)OP(O)([O-])=O)[C@H]1O</p>
            <p>inchikey: KCPMACXZAITQAX-UUOKFMHZSA-H</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_LAUROYLCOA__45__CPD_c" id="M_LAUROYLCOA__45__CPD_c" name="lauroyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C33H54N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 945.807</p>
            <p>smiles: CCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: YMCXGHLSVALICC-GMHMEAMDSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_LAUROYLCOA__45__CPD_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_GUANIDOACETIC_ACID_c" id="M_GUANIDOACETIC_ACID_c" name="guanidinoacetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7N3O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 117.1066</p>
            <p>smiles: NC(=[NH2+])NCC([O-])=O</p>
            <p>inchikey: BPMFZUMJYQTVII-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GUANIDOACETIC_ACID_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_CPD__45__7222_c" id="M_CPD__45__7222_c" name="(2E)-dodec-2-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C33H52N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 943.791</p>
            <p>smiles: CCCCCCCCC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: IRFYVBULXZMEDE-DEEZISNZSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_DNA__45__containing__45__a__45__Apyrimidinic__45__Sites_c" id="M_DNA__45__containing__45__a__45__Apyrimidinic__45__Sites_c" name="an apyrimidinic site in DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Damaged__45__DNA__45__Pyrimidine_c" id="M_Damaged__45__DNA__45__Pyrimidine_c" name="a damaged DNA pyrimidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__7649_c" id="M_CPD__45__7649_c" name="dopamine 3-O-sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H11NO5S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 233.242</p>
            <p>smiles: [NH3+]CCc1ccc(O)c(OS([O-])(=O)=O)c1</p>
            <p>inchikey: NZKRYJGNYPYXJZ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H11NO5S/c9-4-3-6-1-2-7(10)8(5-6)14-15(11,12)13/h1-2,5,10H,3-4,9H2,(H,11,12,13)"/>
                </rdf:Bag>
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      </species>
      <species metaid="M_CPD__45__464_c" id="M_CPD__45__464_c" name="prephytoene diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C40H65O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 719.8891</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\C1C(COP([O-])(=O)OP([O-])([O-])=O)C1(C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C</p>
            <p>inchikey: RVCNKTPCHZNAAO-QKUGLALCSA-K</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD__45__12321_c" id="M_CPD__45__12321_c" name="15-cis-phytoene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H64">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 544.9362</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\C=C/C=C(\C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C</p>
            <p>inchikey: YVLPJIGOMTXXLP-BHLJUDRVSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_GDP__45__L__45__GALACTOSE_c" id="M_GDP__45__L__45__GALACTOSE_c" name="GDP-&amp;beta;-L-galactose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O16P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 603.3263</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)O[C@H]2O[C@@H](CO)[C@@H](O)[C@@H](O)[C@@H]2O)[C@@H](O)[C@H]1O</p>
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        </annotation>
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      <species metaid="M_S__45__HYDROXYMETHYLGLUTATHIONE_c" id="M_S__45__HYDROXYMETHYLGLUTATHIONE_c" name="S-(hydroxymethyl)glutathione" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H18N3O7S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 336.342</p>
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CSCO)C(=O)NCC([O-])=O)C([O-])=O</p>
            <p>inchikey: PIUSLWSYOYFRFR-BQBZGAKWSA-M</p>
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            <rdf:Description rdf:about="#M_S__45__HYDROXYMETHYLGLUTATHIONE_c">
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      <species metaid="M_CPDQT__45__4_c" id="M_CPDQT__45__4_c" name="&amp;beta;-L-galactose 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
            <p>smiles: OC[C@@H]1O[C@H](OP([O-])([O-])=O)[C@@H](O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: HXXFSFRBOHSIMQ-SXUWKVJYSA-L</p>
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        </notes>
        <annotation>
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              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_2__45__PHOSPHO__45__4__45__CYTIDINE__45__5__45__DIPHOSPHO__45__2__45__C__45__MET_c" id="M_2__45__PHOSPHO__45__4__45__CYTIDINE__45__5__45__DIPHOSPHO__45__2__45__C__45__MET_c" name="2-phospho-4-(cytidine 5&apos;-diphospho)-2-C-methyl-D-erythritol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C14H22N3O17P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 597.2579</p>
            <p>smiles: C[C@@](CO)(OP([O-])([O-])=O)[C@H](O)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1ccc(N)nc1=O</p>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 120.1485</p>
            <p>smiles: [H]C(=O)Cc1ccccc1</p>
            <p>inchikey: DTUQWGWMVIHBKE-UHFFFAOYSA-N</p>
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        </notes>
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            <rdf:Description rdf:about="#M_PHENYLACETALDEHYDE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
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      <species metaid="M_PHENYLACETATE_c" id="M_PHENYLACETATE_c" name="phenylacetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H7O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 135.1405</p>
            <p>smiles: [O-]C(=O)Cc1ccccc1</p>
            <p>inchikey: WLJVXDMOQOGPHL-UHFFFAOYSA-M</p>
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        </notes>
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            <rdf:Description rdf:about="#M_PHENYLACETATE_c">
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      <species metaid="M_Phenols_c" id="M_Phenols_c" name="a phenol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 222.262</p>
            <p>smiles: [NH3+][C@@H](CCSC[C@H]([NH3+])C([O-])=O)C([O-])=O</p>
            <p>inchikey: ILRYLPWNYFXEMH-WHFBIAKZSA-N</p>
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        </notes>
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      <species metaid="M_CPD__45__239_c" id="M_CPD__45__239_c" name="cysteamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C2H8NS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 78.156</p>
            <p>smiles: [NH3+]CCS</p>
            <p>inchikey: UFULAYFCSOUIOV-UHFFFAOYSA-O</p>
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        </notes>
        <annotation>
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      <species metaid="M_11Z__45__icos__45__11__45__enoyl__45__ACPs_c" id="M_11Z__45__icos__45__11__45__enoyl__45__ACPs_c" name="a gondoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_L__45__glutamyl__45__tRNAGln_c" id="M_L__45__glutamyl__45__tRNAGln_c" name="an L-glutamyl-[tRNAGln]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Charged__45__GLN__45__tRNAs_c" id="M_Charged__45__GLN__45__tRNAs_c" name="an L-glutaminyl-[tRNAGln]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD__45__10364_c" id="M_CPD__45__10364_c" name="a trigalactosyldiacylglycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H36O20R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Tetragalactosyldiacylglycerol_c" id="M_Tetragalactosyldiacylglycerol_c" name="a tetragalactosyldiacylglycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H46O25R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H](OC[C@H]2O[C@@H](OC[C@H]3O[C@@H](OC[C@H]4O[C@@H](OC[C@@H](COC(*)=O)OC(*)=O)[C@H](O)[C@@H](O)[C@H]4O)[C@H](O)[C@@H](O)[C@H]3O)[C@H](O)[C@@H](O)[C@H]2O)[C@H](O)[C@@H](O)[C@H]1O</p>
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        </notes>
      </species>
      <species metaid="M_CYS__45__tRNAs_c" id="M_CYS__45__tRNAs_c" name="a tRNACys" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Charged__45__CYS__45__tRNAs_c" id="M_Charged__45__CYS__45__tRNAs_c" name="an L-cysteinyl-[tRNACys]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__2961_c" id="M_CPD__45__2961_c" name="D-gluconate 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H10O10P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 273.113</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H](O)[C@@H](O)C([O-])=O</p>
            <p>inchikey: BIRSGZKFKXLSJQ-SQOUGZDYSA-K</p>
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      <species metaid="M_GUANINE_c" id="M_GUANINE_c" name="guanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 151.1261</p>
            <p>smiles: Nc1nc2[nH]cnc2c(=O)[nH]1</p>
            <p>inchikey: UYTPUPDQBNUYGX-UHFFFAOYSA-N</p>
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      <species metaid="M_GMP_c" id="M_GMP_c" name="GMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 361.2058</p>
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            <rdf:Description rdf:about="#M_GMP_c">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 148.114</p>
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            <p>inchikey: CUOKHACJLGPRHD-JJYYJPOSSA-N</p>
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      <species metaid="M_CPD__45__1789_c" id="M_CPD__45__1789_c" name="dehydro-D-arabinono-1,4-lactone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H5O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 145.0907</p>
            <p>smiles: OC[C@H]1OC(=O)C(O)=C1[O-]</p>
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      <species metaid="M_2__45__trans__45__4__45__cis__45__dienoyl__45__CoAs_c" id="M_2__45__trans__45__4__45__cis__45__dienoyl__45__CoAs_c" name="a 2-trans-4-cis-dienoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__5881_c" id="M_CPD__45__5881_c" name="(6R)-4a-hydroxy-tetrahydrobiopterin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H15N5O4">
        <notes>
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            <p>mass: 257.2465</p>
            <p>smiles: [H][C@@]1(CNC2=NC(N)=NC(=O)[C@]2(O)N1)C(O)C(C)O</p>
            <p>inchikey: KJKIEFUPAPPGBC-ATDKUNPGSA-N</p>
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              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H15N5O4/c1-3(15)5(16)4-2-11-6-9(18,14-4)7(17)13-8(10)12-6/h3-5,14-16,18H,2H2,1H3,(H3,10,11,12,13,17)/t3?,4-,5?,9+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__14202_c" id="M_CPD__45__14202_c" name="L-erythro-7,8-dihydrobiopterin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 239.2312</p>
            <p>smiles: C[C@H](O)[C@H](O)C1=Nc2c(NC1)[nH]c(N)nc2=O</p>
            <p>inchikey: FEMXZDUTFRTWPE-DZSWIPIPSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ILE__45__tRNAs_c" id="M_ILE__45__tRNAs_c" name="a tRNAIle" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Charged__45__ILE__45__tRNAs_c" id="M_Charged__45__ILE__45__tRNAs_c" name="an L-isoleucyl-[tRNAIle]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3Prime__45__OH__45__Terminated__45__RNAs_c" id="M_3Prime__45__OH__45__Terminated__45__RNAs_c" name="an [RNA]-3&apos;-hydroxyl" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5__45__Phospho__45__RNA_c" id="M_5__45__Phospho__45__RNA_c" name="a 5&apos;-phospho-ribonucleoside-[RNA]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DNA__45__directed__45__RNA__45__polymerases_c" id="M_DNA__45__directed__45__RNA__45__polymerases_c" name="[a DNA-directed RNA-polymerase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Phospho__45__DNA__45__directed__45__RNA__45__polymerases_c" id="M_Phospho__45__DNA__45__directed__45__RNA__45__polymerases_c" name="phospho-[DNA-directed RNA-polymerase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Aryl__45__beta__45__D__45__Glucosides_c" id="M_Aryl__45__beta__45__D__45__Glucosides_c" name="an aryl &amp;beta;-D-glucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3__45__HYDROXY__45__ISOVALERYL__45__COA_c" id="M_3__45__HYDROXY__45__ISOVALERYL__45__COA_c" name="3-hydroxyisovaleryl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H40N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 863.62</p>
            <p>smiles: CC(C)(O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: PEVZKILCBDEOBT-CITAKDKDSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__HYDROXY__45__ISOVALERYL__45__COA_c">
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                <rdf:Bag>
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        </annotation>
      </species>
      <species metaid="M_PHE__45__tRNAs_c" id="M_PHE__45__tRNAs_c" name="a tRNAPhe" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__3762_c" id="M_CPD__45__3762_c" name="5-amino-4-imidazolecarboxyamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6N4O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 126.1166</p>
            <p>smiles: NC(=O)c1nc[nH]c1N</p>
            <p>inchikey: DVNYTAVYBRSTGK-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__3762_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_Charged__45__PHE__45__tRNAs_c" id="M_Charged__45__PHE__45__tRNAs_c" name="an L-phenylalanyl-[tRNAPhe]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_HYPOTAURINE_c" id="M_HYPOTAURINE_c" name="hypotaurine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H7NO2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 109.147</p>
            <p>smiles: [NH3+]CCS([O-])=O</p>
            <p>inchikey: VVIUBCNYACGLLV-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HYPOTAURINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H7NO2S/c3-1-2-6(4)5/h1-3H2,(H,4,5)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_3__45__MERCAPTO__45__PYRUVATE_c" id="M_3__45__MERCAPTO__45__PYRUVATE_c" name="3-mercaptopyruvate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H3O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 119.12</p>
            <p>smiles: [O-]C(=O)C(=O)CS</p>
            <p>inchikey: OJOLFAIGOXZBCI-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__MERCAPTO__45__PYRUVATE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
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      </species>
      <species metaid="M_CYSTINE_c" id="M_CYSTINE_c" name="CYSTINE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12N2O4S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 240.3</p>
            <p>smiles: [NH3+][C@@H](CSSC[C@H]([NH3+])C([O-])=O)C([O-])=O</p>
            <p>inchikey: LEVWYRKDKASIDU-IMJSIDKUSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CYSTINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12N2O4S2/c7-3(5(9)10)1-13-14-2-4(8)6(11)12/h3-4H,1-2,7-8H2,(H,9,10)(H,11,12)/t3-,4-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_THIOCYSTEINE_c" id="M_THIOCYSTEINE_c" name="THIOCYSTEINE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 153.223</p>
            <p>smiles: [NH3+][C@@H](CSS)C([O-])=O</p>
            <p>inchikey: XBKONSCREBSMCS-REOHCLBHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_THIOCYSTEINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO2S2/c4-2(1-8-7)3(5)6/h2,7H,1,4H2,(H,5,6)/t2-/m0/s1"/>
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      <species metaid="M_CPD__45__110_c" id="M_CPD__45__110_c" name="salicylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 137.1133</p>
            <p>smiles: Oc1ccccc1C([O-])=O</p>
            <p>inchikey: YGSDEFSMJLZEOE-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      </species>
      <species metaid="M_ADENOSYL__45__P4_c" id="M_ADENOSYL__45__P4_c" name="P1,P4-bis(5&apos;-adenosyl) tetraphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C20H24N10O19P4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 832.3574</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1O</p>
            <p>inchikey: YOAHKNVSNCMZGQ-XPWFQUROSA-J</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_ADENOSYL__45__P4_c">
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                </rdf:Bag>
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        </annotation>
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      <species metaid="M_CPD__45__6442_c" id="M_CPD__45__6442_c" name="methylsalicylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H8O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 152.1473</p>
            <p>smiles: COC(=O)c1ccccc1O</p>
            <p>inchikey: OSWPMRLSEDHDFF-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__6442_c">
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                </rdf:Bag>
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      <species metaid="M_CPD__45__17866_c" id="M_CPD__45__17866_c" name="S-sulfinatoglutathione" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H15N3O8S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 369.372</p>
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CSS([O-])=O)C(=O)NCC([O-])=O)C([O-])=O</p>
            <p>inchikey: QUBUTNSZZFICHL-WDSKDSINSA-L</p>
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        </notes>
        <annotation>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__558_c" id="M_CPD__45__558_c" name="pimeloyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C28H41N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 904.65</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CCCCCC([O-])=O</p>
            <p>inchikey: LYCRXMTYUZDUGA-UYRKPTJQSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__558_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C28H46N7O19P3S/c1-28(2,23(41)26(42)31-9-8-17(36)30-10-11-58-19(39)7-5-3-4-6-18(37)38)13-51-57(48,49)54-56(46,47)50-12-16-22(53-55(43,44)45)21(40)27(52-16)35-15-34-20-24(29)32-14-33-25(20)35/h14-16,21-23,27,40-41H,3-13H2,1-2H3,(H,30,36)(H,31,42)(H,37,38)(H,46,47)(H,48,49)(H2,29,32,33)(H2,43,44,45)/p-5/t16-,21-,22-,23+,27-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CGMP_c" id="M_CGMP_c" name="cyclic-GMP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H11N5O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 344.198</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@@H]2COP([O-])(=O)O[C@H]2[C@H]1O</p>
            <p>inchikey: ZOOGRGPOEVQQDX-UUOKFMHZSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CGMP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H12N5O7P/c11-10-13-7-4(8(17)14-10)12-2-15(7)9-5(16)6-3(21-9)1-20-23(18,19)22-6/h2-3,5-6,9,16H,1H2,(H,18,19)(H3,11,13,14,17)/p-1/t3-,5-,6-,9-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_A__45__LIPID__45__HYDROPEROXIDE_c" id="M_A__45__LIPID__45__HYDROPEROXIDE_c" name="a hydroperoxy-fatty-acyl-[lipid]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Lipid__45__hydroxy__45__fatty__45__acids_c" id="M_Lipid__45__hydroxy__45__fatty__45__acids_c" name="a hydroxy-fatty-acyl-[lipid]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="HOR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O*</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Alkyl__45__Hydro__45__Peroxides_c" id="M_Alkyl__45__Hydro__45__Peroxides_c" name="an organic hydroperoxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="HO2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OO[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_PROCOLLAGEN__45__L__45__PROLINE_c" id="M_PROCOLLAGEN__45__L__45__PROLINE_c" name="a [procollagen]-L-proline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8N2O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: *NC(=O)[C@@H]1CCCN1C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__6321_c" id="M_CPD__45__6321_c" name="a [procollagen] trans 4-hyroxy-L-proline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__8490_c" id="M_CPD__45__8490_c" name="decanal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H20O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 156.2652</p>
            <p>smiles: [H]C(=O)CCCCCCCCC</p>
            <p>inchikey: KSMVZQYAVGTKIV-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__8490_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H20O/c1-2-3-4-5-6-7-8-9-10-11/h10H,2-9H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__3617_c" id="M_CPD__45__3617_c" name="decanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H19O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 171.2572</p>
            <p>smiles: CCCCCCCCCC([O-])=O</p>
            <p>inchikey: GHVNFZFCNZKVNT-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__3617_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H20O2/c1-2-3-4-5-6-7-8-9-10(11)12/h2-9H2,1H3,(H,11,12)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__7880_c" id="M_CPD__45__7880_c" name="dodecanal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H24O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 184.3184</p>
            <p>smiles: [H]C(=O)CCCCCCCCCCC</p>
            <p>inchikey: HFJRKMMYBMWEAD-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__7880_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H24O/c1-2-3-4-5-6-7-8-9-10-11-12-13/h12H,2-11H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2__45__Hydroxy__45__carboxylates_c" id="M_2__45__Hydroxy__45__carboxylates_c" name="a 2-hydroxy carboxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2H2O3R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC([*])C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Acetoacetyl__45__ACPs_c" id="M_Acetoacetyl__45__ACPs_c" name="an acetoacetyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)CC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_DODECANOATE_c" id="M_DODECANOATE_c" name="laurate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H23O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 199.3104</p>
            <p>smiles: CCCCCCCCCCCC([O-])=O</p>
            <p>inchikey: POULHZVOKOAJMA-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DODECANOATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Saturated__45__Fatty__45__Acyl__45__ACPs_c" id="M_Saturated__45__Fatty__45__Acyl__45__ACPs_c" name="a 2,3,4-saturated fatty acyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ETHANOL__45__AMINE_c" id="M_ETHANOL__45__AMINE_c" name="ethanolamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C2H8NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 62.0905</p>
            <p>smiles: [NH3+]CCO</p>
            <p>inchikey: HZAXFHJVJLSVMW-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ETHANOL__45__AMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H7NO/c3-1-2-4/h4H,1-3H2/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_QUINATE_c" id="M_QUINATE_c" name="L-quinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H11O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 191.1592</p>
            <p>smiles: O[C@@H]1C[C@@](O)(C[C@@H](O)[C@H]1O)C([O-])=O</p>
            <p>inchikey: AAWZDTNXLSGCEK-WYWMIBKRSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_QUINATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H12O6/c8-3-1-7(13,6(11)12)2-4(9)5(3)10/h3-5,8-10,13H,1-2H2,(H,11,12)/p-1/t3-,4-,5-,7+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BUTANEDIOL_c" id="M_BUTANEDIOL_c" name="(R,R)-2,3-butanediol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H10O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 90.121</p>
            <p>smiles: C[C@@H](O)[C@@H](C)O</p>
            <p>inchikey: OWBTYPJTUOEWEK-QWWZWVQMSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BUTANEDIOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H10O2/c1-3(5)4(2)6/h3-6H,1-2H3/t3-,4-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__10353_c" id="M_CPD__45__10353_c" name="(R)-acetoin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 88.1051</p>
            <p>smiles: C[C@@H](O)C(C)=O</p>
            <p>inchikey: ROWKJAVDOGWPAT-GSVOUGTGSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__10353_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H8O2/c1-3(5)4(2)6/h3,5H,1-2H3/t3-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_O__45__UREIDOHOMOSERINE_c" id="M_O__45__UREIDOHOMOSERINE_c" name="O-ureido-L-homoserine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11N3O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 177.1585</p>
            <p>smiles: [NH3+]C(CCONC([O-])=[NH2+])C([O-])=O</p>
            <p>inchikey: SFYVZOSIAIZWQU-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_O__45__UREIDOHOMOSERINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H11N3O4/c6-3(4(9)10)1-2-12-8-5(7)11/h3H,1-2,6H2,(H,9,10)(H3,7,8,11)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__10794_c" id="M_CPD__45__10794_c" name="CPD-10794" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C15H20N5O17P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 635.2661</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H](OP([O-])([O-])=O)[C@H](O)[C@@H]2O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: CUNFRFHBHMFVPH-KEOHHSTQSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__10794_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C15H24N5O17P3/c16-12-7-13(18-3-17-12)20(4-19-7)14-10(23)8(21)5(34-14)1-32-39(28,29)37-40(30,31)33-2-6-9(22)11(24)15(35-6)36-38(25,26)27/h3-6,8-11,14-15,21-24H,1-2H2,(H,28,29)(H,30,31)(H2,16,17,18)(H2,25,26,27)/p-4/t5-,6-,8-,9-,10-,11-,14-,15-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ADENOSINE_DIPHOSPHATE_RIBOSE_c" id="M_ADENOSINE_DIPHOSPHATE_RIBOSE_c" name="ADP-D-ribose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C15H21N5O14P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 557.301</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2OC(O)[C@H](O)[C@@H]2O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: SRNWOUGRCWSEMX-TYASJMOZSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ADENOSINE_DIPHOSPHATE_RIBOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C15H23N5O14P2/c16-12-7-13(18-3-17-12)20(4-19-7)14-10(23)8(21)5(32-14)1-30-35(26,27)34-36(28,29)31-2-6-9(22)11(24)15(25)33-6/h3-6,8-11,14-15,21-25H,1-2H2,(H,26,27)(H,28,29)(H2,16,17,18)/p-2/t5-,6-,8-,9-,10-,11-,14-,15?/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__10472_c" id="M_CPD__45__10472_c" name="3-dimethylsulfoniopropionaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H11OS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 119.205</p>
            <p>smiles: C[S+](C)CCC=O</p>
            <p>inchikey: OISJAAYQHIBAQP-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__10472_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H11OS/c1-7(2)5-3-4-6/h4H,3,5H2,1-2H3/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_SS__45__DIMETHYL__45__BETA__45__PROPIOTHETIN_c" id="M_SS__45__DIMETHYL__45__BETA__45__PROPIOTHETIN_c" name="dimethylsulfoniopropanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O2S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 134.197</p>
            <p>smiles: C[S+](C)CCC([O-])=O</p>
            <p>inchikey: DFPOZTRSOAQFIK-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_SS__45__DIMETHYL__45__BETA__45__PROPIOTHETIN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H10O2S/c1-8(2)4-3-5(6)7/h3-4H2,1-2H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__12177_c" id="M_CPD__45__12177_c" name="(R)-methylmalonate-semialdehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 101.0812</p>
            <p>smiles: [H][C@@](C)(C=O)C([O-])=O</p>
            <p>inchikey: VOKUMXABRRXHAR-GSVOUGTGSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__12177_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H6O3/c1-3(2-5)4(6)7/h2-3H,1H3,(H,6,7)/p-1/t3-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GLYCEROPHOSPHOGLYCEROL_c" id="M_GLYCEROPHOSPHOGLYCEROL_c" name="glycerophosphoglycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H14O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 245.1449</p>
            <p>smiles: OCC(O)COP([O-])(=O)OCC(O)CO</p>
            <p>inchikey: LLCSXHMJULHSJN-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GLYCEROPHOSPHOGLYCEROL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H15O8P/c7-1-5(9)3-13-15(11,12)14-4-6(10)2-8/h5-10H,1-4H2,(H,11,12)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__371_c" id="M_CPD__45__371_c" name="1-octanal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H16O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 128.212</p>
            <p>smiles: [H]C(=O)CCCCCCC</p>
            <p>inchikey: NUJGJRNETVAIRJ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__371_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H16O/c1-2-3-4-5-6-7-8-9/h8H,2-7H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__195_c" id="M_CPD__45__195_c" name="octanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H15O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 143.204</p>
            <p>smiles: CCCCCCCC([O-])=O</p>
            <p>inchikey: WWZKQHOCKIZLMA-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__195_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H16O2/c1-2-3-4-5-6-7-8(9)10/h2-7H2,1H3,(H,9,10)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Octadec__45__2__45__enoyl__45__ACPs_c" id="M_Octadec__45__2__45__enoyl__45__ACPs_c" name="a (2E)-octadec-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCCCC\C=C\C(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_MALEAMATE_c" id="M_MALEAMATE_c" name="maleamate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H4NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 114.08</p>
            <p>smiles: NC(=O)\C=C/C([O-])=O</p>
            <p>inchikey: FSQQTNAZHBEJLS-UPHRSURJSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MALEAMATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H5NO3/c5-3(6)1-2-4(7)8/h1-2H,(H2,5,6)(H,7,8)/p-1/b2-1-"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__804_c" id="M_CPD__45__804_c" name="(4S)-4-hydroxy-2-oxoheptanedioate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H8O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 188.1359</p>
            <p>smiles: O[C@@H](CCC([O-])=O)CC(=O)C([O-])=O</p>
            <p>inchikey: HNOAJOYERZTSNK-BYPYZUCNSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__804_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H10O6/c8-4(1-2-6(10)11)3-5(9)7(12)13/h4,8H,1-3H2,(H,10,11)(H,12,13)/p-2/t4-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__6224_c" id="M_CPD__45__6224_c" name="gibberellin A34" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H23O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 347.3829</p>
            <p>smiles: [H][C@@]12C[C@]3(CC1=C)[C@@H](C([O-])=O)[C@]1([H])[C@@]4(C)[C@@H](O)[C@@H](O)C[C@@]1(OC4=O)[C@]3([H])CC2</p>
            <p>inchikey: IGZIQAJJXGRAJF-TXZPEUJSSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__6224_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C19H24O6/c1-8-5-18-6-9(8)3-4-11(18)19-7-10(20)14(21)17(2,16(24)25-19)13(19)12(18)15(22)23/h9-14,20-21H,1,3-7H2,2H3,(H,22,23)/p-1/t9-,10+,11-,12-,13-,14+,17+,18+,19-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD1F__45__137_c" id="M_CPD1F__45__137_c" name="gibberellin A4" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H23O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 331.3835</p>
            <p>smiles: [H][C@@]12C[C@]3(CC1=C)[C@@H](C([O-])=O)[C@]1([H])[C@@]4(C)[C@@H](O)CC[C@@]1(OC4=O)[C@]3([H])CC2</p>
            <p>inchikey: RSQSQJNRHICNNH-NFMPGMCNSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD1F__45__137_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C19H24O5/c1-9-7-18-8-10(9)3-4-11(18)19-6-5-12(20)17(2,16(23)24-19)14(19)13(18)15(21)22/h10-14,20H,1,3-8H2,2H3,(H,21,22)/p-1/t10-,11-,12+,13-,14-,17-,18+,19-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__L__45__GLUTAMYL__45__L__45__AMINO__45__ACID_c" id="M_5__45__L__45__GLUTAMYL__45__L__45__AMINO__45__ACID_c" name="an &amp;alpha;-(&amp;gamma;-L-glutamyl)-L-amino acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H10N2O5R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](*)C([O-])=O)C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_16S__45__rRNA__45__guanine__45__1207_c" id="M_16S__45__rRNA__45__guanine__45__1207_c" name="a guanine1207 in 16S rRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_16S__45__rRNA__45__N2__45__methylguanine1207_c" id="M_16S__45__rRNA__45__N2__45__methylguanine1207_c" name="an N2-methylguanine1207 in 16S rRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_23S__45__rRNA__45__guanine__45__1835_c" id="M_23S__45__rRNA__45__guanine__45__1835_c" name="a guanine1835 in 23S rRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_23S__45__rRNA__45__N2__45__methylguanine1835_c" id="M_23S__45__rRNA__45__N2__45__methylguanine1835_c" name="an N2-methylguanine1835  in 23S rRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Glycogens_c" id="M_Glycogens_c" name="a glycogen" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CHORISMATE_c" id="M_CHORISMATE_c" name="chorismate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H8O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 224.168</p>
            <p>smiles: O[C@@H]1C=CC(=C[C@H]1OC(=C)C([O-])=O)C([O-])=O</p>
            <p>inchikey: WTFXTQVDAKGDEY-HTQZYQBOSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CHORISMATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H10O6/c1-5(9(12)13)16-8-4-6(10(14)15)2-3-7(8)11/h2-4,7-8,11H,1H2,(H,12,13)(H,14,15)/p-2/t7-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_KDO2__45__PALMITOLEOYL__45__LIPID__45__IVA_c" id="M_KDO2__45__PALMITOLEOYL__45__LIPID__45__IVA_c" name="Kdo2-(palmitoleoyl)-lipid IVA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-6" fbc:chemicalFormula="C100H176N2O38P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 2076.4089</p>
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            <p>inchikey: GUGOELZTMNFFOJ-MHGVWHNGSA-H</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@H](COC([*])=O)COP([O-])([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__321_c" id="M_CPD__45__321_c" name="3-aci-nitropropanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H4NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 118.0687</p>
            <p>smiles: O[N+]([O-])=CCC([O-])=O</p>
            <p>inchikey: DCSLGQYKPBZRHI-UHFFFAOYSA-M</p>
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          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD__45__490_c" id="M_CPD__45__490_c" name="&amp;alpha;-D-xylose 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 228.095</p>
            <p>smiles: O[C@@H]1CO[C@H](OP([O-])([O-])=O)[C@H](O)[C@H]1O</p>
            <p>inchikey: ILXHFXFPPZGENN-KKQCNMDGSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CDP__45__ETHANOLAMINE_c" id="M_CDP__45__ETHANOLAMINE_c" name="CDP-ethanolamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H19N4O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 445.2368</p>
            <p>smiles: Nc1ccn([C@@H]2O[C@H](COP([O-])(=O)OP([O-])(=O)OCC[NH3+])[C@@H](O)[C@H]2O)c(=O)n1</p>
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          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C11H20N4O11P2/c12-2-4-23-27(19,20)26-28(21,22)24-5-6-8(16)9(17)10(25-6)15-3-1-7(13)14-11(15)18/h1,3,6,8-10,16-17H,2,4-5,12H2,(H,19,20)(H,21,22)(H2,13,14,18)/p-1/t6-,8-,9-,10-/m1/s1"/>
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              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CDP__45__CHOLINE_c" id="M_CDP__45__CHOLINE_c" name="CDP-choline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C14H25N4O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 487.3166</p>
            <p>smiles: C[N+](C)(C)CCOP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1ccc(N)nc1=O</p>
            <p>inchikey: RZZPDXZPRHQOCG-OJAKKHQRSA-M</p>
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        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_PHOSPHORYL__45__CHOLINE_c" id="M_PHOSPHORYL__45__CHOLINE_c" name="phosphocholine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H13NO4P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 182.1353</p>
            <p>smiles: C[N+](C)(C)CCOP([O-])([O-])=O</p>
            <p>inchikey: YHHSONZFOIEMCP-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PHOSPHORYL__45__CHOLINE_c">
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                <rdf:Bag>
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      </species>
      <species metaid="M_CPD__45__2750_c" id="M_CPD__45__2750_c" name="trans-3&apos;-hydroxycotinine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 192.2145</p>
            <p>smiles: [H][C@]1(C[C@@H](O)C(=O)N1C)c1cccnc1</p>
            <p>inchikey: XOKCJXZZNAUIQN-DTWKUNHWSA-N</p>
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        </notes>
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      <species metaid="M_CPD__45__2752_c" id="M_CPD__45__2752_c" name="trans-3-hydroxycotinine-glucuronide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C16H19N2O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 367.3312</p>
            <p>smiles: [H][C@]1(C[C@]([H])(N(C)C1=O)c1cccnc1)OC1([H])OC([H])(C([O-])=O)C([H])(O)C([H])(O)C1([H])O</p>
            <p>inchikey: WALNNKZUGHYSCT-IYWYPXAGSA-M</p>
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          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD__45__20909_c" id="M_CPD__45__20909_c" name="cob(I)yrinate a,c-diamide-[corrinoid adenosyltranferase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_CPD__45__690_c" id="M_CPD__45__690_c" name="adenosyl-cob(III)yrinate a,c-diamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C55H68CoN11O15">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1182.1285</p>
            <p>smiles: C\C1=C2\N=C(\C=C3/N=C([C@@H](CCC([O-])=O)C3(C)C)/C(/C)=C3\N([Co+]C[C@H]4O[C@H]([C@H](O)[C@@H]4O)n4cnc5c(N)ncnc45)[C@H]([C@H](CC([O-])=O)[C@@]3(C)CCC([O-])=O)[C@]3(C)N=C1[C@@H](CCC([O-])=O)[C@]3(C)CC(N)=O)[C@@H](CCC([O-])=O)[C@]2(C)CC(N)=O</p>
            <p>inchikey: OCNLJCZKGHKJGF-NQYRMHKHSA-H</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_ARSENATE_c" id="M_ARSENATE_c" name="arsenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="AsHO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 139.9282</p>
            <p>smiles: O[As]([O-])([O-])=O</p>
            <p>inchikey: DJHGAFSJWGLOIV-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ARSENATE_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/AsH3O4/c2-1(3,4)5/h(H3,2,3,4,5)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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      </species>
      <species metaid="M_P3I_c" id="M_P3I_c" name="triphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="O10P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 252.918</p>
            <p>smiles: [O-]P([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: UNXRWKVEANCORM-UHFFFAOYSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_P3I_c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H5O10P3/c1-11(2,3)9-13(7,8)10-12(4,5)6/h(H,7,8)(H2,1,2,3)(H2,4,5,6)/p-5"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_Corrinoid__45__Adenosyltransferases_c" id="M_Corrinoid__45__Adenosyltransferases_c" name="a [corrinoid adenosyltransferase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Poly__45__beta__45__D__45__Mannuronate_c" id="M_Poly__45__beta__45__D__45__Mannuronate_c" name="mannuronan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 194</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__2742_c" id="M_CPD__45__2742_c" name="cotinine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N2O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 176.2151</p>
            <p>smiles: [H][C@]1(CCC(=O)N1C)c1cccnc1</p>
            <p>inchikey: UIKROCXWUNQSPJ-VIFPVBQESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__2742_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H12N2O/c1-12-9(4-5-10(12)13)8-3-2-6-11-7-8/h2-3,6-7,9H,4-5H2,1H3/t9-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__2747_c" id="M_CPD__45__2747_c" name="cotinine-glucuronide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H20N2O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 352</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__2747_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_NITRIC__45__OXIDE_c" id="M_NITRIC__45__OXIDE_c" name="nitric oxide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 30.0061</p>
            <p>smiles: [N]=O</p>
            <p>inchikey: MWUXSHHQAYIFBG-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_NITRIC__45__OXIDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/NO/c1-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__DIHYDROXY__45__PHENYLALANINE_c" id="M_L__45__DIHYDROXY__45__PHENYLALANINE_c" name="L-dopa" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 197.1879</p>
            <p>smiles: [NH3+][C@@H](Cc1ccc(O)c(O)c1)C([O-])=O</p>
            <p>inchikey: WTDRDQBEARUVNC-LURJTMIESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__DIHYDROXY__45__PHENYLALANINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H11NO4/c10-6(9(13)14)3-5-1-2-7(11)8(12)4-5/h1-2,4,6,11-12H,3,10H2,(H,13,14)/t6-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__20_c" id="M_CPD__45__20_c" name="3-hydroxy-5- oxohexanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C27H40N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 891.63</p>
            <p>smiles: CC(=O)CC(O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: LTOOEXBCTAXFSU-SNIDVWGTSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__20_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__4186_c" id="M_CPD__45__4186_c" name="lathosterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H46O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 386.6535</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])C3=CC[C@@]4([H])C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CCCC(C)C</p>
            <p>inchikey: IZVFFXVYBHFIHY-SKCNUYALSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__4186_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C27H46O/c1-18(2)7-6-8-19(3)23-11-12-24-22-10-9-20-17-21(28)13-15-26(20,4)25(22)14-16-27(23,24)5/h10,18-21,23-25,28H,6-9,11-17H2,1-5H3/t19-,20+,21+,23-,24+,25+,26+,27-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__8621_c" id="M_CPD__45__8621_c" name="zymostenol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H46O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 386.6535</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])C3=C(CC[C@]12C)[C@@]1(C)CC[C@H](O)C[C@]1([H])CC3)[C@H](C)CCCC(C)C</p>
            <p>inchikey: QETLKNDKQOXZRP-XTGBIJOFSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__8621_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C27H46O/c1-18(2)7-6-8-19(3)23-11-12-24-22-10-9-20-17-21(28)13-15-26(20,4)25(22)14-16-27(23,24)5/h18-21,23-24,28H,6-17H2,1-5H3/t19-,20+,21+,23-,24+,26+,27-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2__45__HYDROXY__45__3__45__KETO__45__5__45__METHYLTHIO__45__1__45__PHOSPHOP_c" id="M_2__45__HYDROXY__45__3__45__KETO__45__5__45__METHYLTHIO__45__1__45__PHOSPHOP_c" name="2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H9O6PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 240.172</p>
            <p>smiles: [H]C(OP([O-])([O-])=O)=C(O)C(=O)CCSC</p>
            <p>inchikey: YIEMFVNCENFBSD-XQRVVYSFSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_2__45__HYDROXY__45__3__45__KETO__45__5__45__METHYLTHIO__45__1__45__PHOSPHOP_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H11O6PS/c1-14-3-2-5(7)6(8)4-12-13(9,10)11/h4,8H,2-3H2,1H3,(H2,9,10,11)/p-2/b6-4-"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__706_c" id="M_CPD__45__706_c" name="24-methylenecholesterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H46O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 398.6642</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])[C@]3([H])CC=C4C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CCC(=C)C(C)C</p>
            <p>inchikey: INDVLXYUCBVVKW-PXBBAZSNSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__706_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__700_c" id="M_CPD__45__700_c" name="ergosta-5,7,24(28)-trien-3&amp;beta;-ol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H44O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 396.6484</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])C3=CC=C4C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CCC(=C)C(C)C</p>
            <p>inchikey: ZEPNVCGPJXYABB-LOIOQLKMSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__700_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C28H44O/c1-18(2)19(3)7-8-20(4)24-11-12-25-23-10-9-21-17-22(29)13-15-27(21,5)26(23)14-16-28(24,25)6/h9-10,18,20,22,24-26,29H,3,7-8,11-17H2,1-2,4-6H3/t20-,22+,24-,25+,26+,27+,28-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BCCP__45__biotin__45__monomers_c" id="M_BCCP__45__biotin__45__monomers_c" name="BCCP-biotin-monomers" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_VAL__45__tRNAs_c" id="M_VAL__45__tRNAs_c" name="a tRNAVal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Charged__45__VAL__45__tRNAs_c" id="M_Charged__45__VAL__45__tRNAs_c" name="an L-valyl-[tRNAVal]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__194_c" id="M_CPD__45__194_c" name="4-nitrophenyl phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H4NO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 217.0739</p>
            <p>smiles: [O-][N+](=O)c1ccc(OP([O-])([O-])=O)cc1</p>
            <p>inchikey: XZKIHKMTEMTJQX-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__194_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H6NO6P/c8-7(9)5-1-3-6(4-2-5)13-14(10,11)12/h1-4H,(H2,10,11,12)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_P__45__NITROPHENOL_c" id="M_P__45__NITROPHENOL_c" name="4-nitrophenol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H4NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 138.1014</p>
            <p>smiles: [O-]c1ccc(cc1)[N+]([O-])=O</p>
            <p>inchikey: BTJIUGUIPKRLHP-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_P__45__NITROPHENOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H5NO3/c8-6-3-1-5(2-4-6)7(9)10/h1-4,8H/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Crotonyl__45__ACPs_c" id="M_Crotonyl__45__ACPs_c" name="a (2E)-but-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C\C=C\C(=O)S*</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Beta__45__3__45__hydroxybutyryl__45__ACPs_c" id="M_Beta__45__3__45__hydroxybutyryl__45__ACPs_c" name="a (3R)-3-hydroxybutanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H27N2O9PRS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3__45__Hydroxy__45__octanoyl__45__ACPs_c" id="M_3__45__Hydroxy__45__octanoyl__45__ACPs_c" name="a (3R)-3-hydroxyoctanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H35N2O9PRS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_2__45__Octenoyl__45__ACPs_c" id="M_2__45__Octenoyl__45__ACPs_c" name="a (2E)-oct-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H33N2O8PRS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DNA__45__containing__45__abasic__45__Sites_c" id="M_DNA__45__containing__45__abasic__45__Sites_c" name="a DNA containing an apurinic/apyrimidinic site" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_KDO2__45__LIPID__45__IVA_c" id="M_KDO2__45__LIPID__45__IVA_c" name="&amp;alpha;-Kdo-(2-&gt;4)-&amp;alpha;-Kdo-(2-&gt;6)-lipid IVA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-6" fbc:chemicalFormula="C84H148N2O37P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1840.0159</p>
            <p>smiles: CCCCCCCCCCC[C@@H](O)CC(=O)N[C@H]1[C@@H](OP([O-])([O-])=O)O[C@H](CO[C@@H]2O[C@H](CO[C@@]3(C[C@@H](O[C@@]4(C[C@@H](O)[C@@H](O)[C@H](O4)[C@H](O)CO)C([O-])=O)[C@@H](O)[C@H](O3)[C@H](O)CO)C([O-])=O)[C@@H](OP([O-])([O-])=O)[C@H](OC(=O)C[C@H](O)CCCCCCCCCCC)[C@H]2NC(=O)C[C@H](O)CCCCCCCCCCC)[C@@H](O)[C@@H]1OC(=O)C[C@H](O)CCCCCCCCCCC</p>
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        </notes>
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      <species metaid="M_CROTONYL__45__COA_c" id="M_CROTONYL__45__COA_c" name="crotonyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H36N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 831.579</p>
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            <p>inchikey: KFWWCMJSYSSPSK-PAXLJYGASA-J</p>
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        </notes>
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      <species metaid="M_medium__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" id="M_medium__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" name="a medium-chain trans-2,3-dehydroacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Medium__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" id="M_Medium__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" name="a medium-chain 2,3,4-saturated fatty acyl CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__380_c" id="M_CPD__45__380_c" name="3-sulfopyruvate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H2O6S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 166.11</p>
            <p>smiles: [O-]C(=O)C(=O)CS([O-])(=O)=O</p>
            <p>inchikey: BUTHMSUEBYPMKJ-UHFFFAOYSA-L</p>
          </body>
        </notes>
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      <species metaid="M_L__45__CYSTEATE_c" id="M_L__45__CYSTEATE_c" name="L-cysteate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H6NO5S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 168.149</p>
            <p>smiles: [NH3+][C@@H](CS([O-])(=O)=O)C([O-])=O</p>
            <p>inchikey: XVOYSCVBGLVSOL-REOHCLBHSA-M</p>
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        </notes>
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      <species metaid="M_16S__45__rRNA__45__N2__45__methylguanine966_c" id="M_16S__45__rRNA__45__N2__45__methylguanine966_c" name="an N2-methylguanine966 in 16S rRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__12763_c" id="M_CPD__45__12763_c" name="5-aminopentanal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H12NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 102.1543</p>
            <p>smiles: [NH3+]CCCCC=O</p>
            <p>inchikey: SZBGXBOFCGNPEU-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_L__45__PANTOATE_c" id="M_L__45__PANTOATE_c" name="(R)-pantoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H11O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 147.1497</p>
            <p>smiles: CC(C)(CO)[C@@H](O)C([O-])=O</p>
            <p>inchikey: OTOIIPJYVQJATP-BYPYZUCNSA-M</p>
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        </notes>
        <annotation>
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      <species metaid="M_CPD0__45__971_c" id="M_CPD0__45__971_c" name="an &amp;alpha;-limit dextrin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_L__45__3__45__HYDROXYACYL__45__COA_c" id="M_L__45__3__45__HYDROXYACYL__45__COA_c" name="a 2,3,4-saturated  (3S)-3-hydroxyacyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C24H35N7O18P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C[C@@H](O)[*]</p>
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        </notes>
      </species>
      <species metaid="M_CPD1G__45__0_c" id="M_CPD1G__45__0_c" name="1-(2-amino-2-deoxy-&amp;alpha;-D-glucopyranosyl)-1D-myo-inositol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C12H24NO10">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 342.3191</p>
            <p>smiles: [NH3+][C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: HEPUIGACZYVUCD-LFIKJOHQSA-O</p>
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        <annotation>
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      <species metaid="M_ASP__45__tRNAs_c" id="M_ASP__45__tRNAs_c" name="tRNAasp" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Charged__45__ASP__45__tRNAs_c" id="M_Charged__45__ASP__45__tRNAs_c" name="an L-aspartyl-[tRNAasp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Glycerophosphodiesters_c" id="M_Glycerophosphodiesters_c" name="a glycerophosphodiester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H7O6PR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OCC(O)COP([O-])(=O)O[*]</p>
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        </notes>
      </species>
      <species metaid="M_Apo__45__EntB_c" id="M_Apo__45__EntB_c" name="an apo-[EntB aryl-carrier protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Holo__45__EntB_c" id="M_Holo__45__EntB_c" name="a holo-[EntB aryl-carrier protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_L__45__BETA__45__ASPARTYL__45__P_c" id="M_L__45__BETA__45__ASPARTYL__45__P_c" name="L-aspartyl-4-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H6NO7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 211.0678</p>
            <p>smiles: [NH3+][C@@H](CC(=O)OP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: IXZNKTPIYKDIGG-REOHCLBHSA-L</p>
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      <species metaid="M_CPD__45__698_c" id="M_CPD__45__698_c" name="campest-4-en-3-one" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H46O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 398.6642</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])[C@]3([H])CCC4=CC(=O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CC[C@@H](C)C(C)C</p>
            <p>inchikey: QQIOPZFVTIHASB-IMUDCKKOSA-N</p>
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      <species metaid="M_CPD__45__709_c" id="M_CPD__45__709_c" name="(5&amp;alpha;)-campestan-3-one" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H48O">
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 400.6801</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 416.6795</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])[C@]3([H])CC(=O)[C@@]4([H])C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CC[C@@H](C)C(C)C</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 432.6789</p>
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            <p>inchikey: JSVPGVHCEQDJCZ-VGEHDTSWSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 587.3269</p>
            <p>smiles: C[C@@H]1OC(OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c2nc(N)[nH]c3=O)[C@@H](O)[C@H](O)[C@@H]1O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 271.4161</p>
            <p>smiles: OCCCCCCCCCCCCCCCC([O-])=O</p>
            <p>inchikey: UGAGPNKCDRTDHP-UHFFFAOYSA-M</p>
          </body>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1017.913</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 271.0971</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 519.2927</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 214.1115</p>
            <p>smiles: C[C@](O)(CO)[C@H](O)COP([O-])([O-])=O</p>
            <p>inchikey: XMWHRVNVKDKBRG-UHNVWZDZSA-L</p>
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__17641_c" id="M_CPD__45__17641_c" name="18-hydroxystearoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H66N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1045.966</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 284.4357</p>
            <p>smiles: [H]C(=O)\C=C(/C)\C=C\C=C(/C)\C=C\C1=C(C)CCCC1(C)C</p>
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            <p>mass: 427.6398</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 382.6218</p>
            <p>smiles: [H]C(C)(CCC=C(C)C)C1([H])CCC2([H])C3=C(CC[C@]12C)[C@@]1(C)CCC(=O)CC1([H])CC3</p>
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        </annotation>
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      <species metaid="M_ZYMOSTEROL_c" id="M_ZYMOSTEROL_c" name="zymosterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H44O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 384.6377</p>
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            <rdf:Description rdf:about="#M_ZYMOSTEROL_c">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 130.2075</p>
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            <p>inchikey: OITBLCDWXSXNCN-UHFFFAOYSA-N</p>
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            <rdf:Description rdf:about="#M_4__45__TRIMETHYLAMMONIOBUTANAL_c">
              <bqbiol:isVersionOf>
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      <species metaid="M_3__45__HYDROXY__45__N6N6N6__45__TRIMETHYL__45__L__45__LYSINE_c" id="M_3__45__HYDROXY__45__N6N6N6__45__TRIMETHYL__45__L__45__LYSINE_c" name="3-hydroxy-N6,N6,N6-trimethyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C9H21N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 205.2741</p>
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            <p>inchikey: ZRJHLGYVUCPZNH-MQWKRIRWSA-O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 258.121</p>
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            <p>inchikey: INAPMGSXUVUWAF-QWBQGLJISA-L</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 438.685</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC\C(C)=C\Cc1cc(O)c2ccccc2c1O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 452.7116</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 153.116</p>
            <p>smiles: [O-]C(=O)C(=O)Cc1cnc[nH]1</p>
            <p>inchikey: JEJNWEREQWMOHB-UHFFFAOYSA-M</p>
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            <rdf:Description rdf:about="#M_IMIDAZOLE__45__PYRUVATE_c">
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      <species metaid="M_Methylated__45__methyl__45__acceptors_c" id="M_Methylated__45__methyl__45__acceptors_c" name="a methylated methyl donor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CH3R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Demethylated__45__methyl__45__acceptors_c" id="M_Demethylated__45__methyl__45__acceptors_c" name="a demethylated methyl donor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_PANTOTHENATE_c" id="M_PANTOTHENATE_c" name="(R)-pantothenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H16NO5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 218.2276</p>
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            <p>inchikey: GHOKWGTUZJEAQD-ZETCQYMHSA-M</p>
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            <rdf:Description rdf:about="#M_PANTOTHENATE_c">
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      <species metaid="M_4__45__P__45__PANTOTHENATE_c" id="M_4__45__P__45__PANTOTHENATE_c" name="(R)-4&apos;-phosphopantothenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H15NO8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 296.1927</p>
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            <p>inchikey: XHFVGHPGDLDEQO-ZETCQYMHSA-K</p>
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      <species metaid="M_DEOXYXYLULOSE__45__5P_c" id="M_DEOXYXYLULOSE__45__5P_c" name="1-deoxy-D-xylulose 5-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 212.0956</p>
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            <p>inchikey: AJPADPZSRRUGHI-RFZPGFLSSA-L</p>
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            <rdf:Description rdf:about="#M_DEOXYXYLULOSE__45__5P_c">
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      <species metaid="M_1__45__AMINO__45__PROPAN__45__2__45__ONE__45__3__45__PHOSPHATE_c" id="M_1__45__AMINO__45__PROPAN__45__2__45__ONE__45__3__45__PHOSPHATE_c" name="3-amino-1-hydroxyacetone 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H7NO5P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 168.0657</p>
            <p>smiles: [NH3+]CC(=O)COP([O-])([O-])=O</p>
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            <rdf:Description rdf:about="#M_1__45__AMINO__45__PROPAN__45__2__45__ONE__45__3__45__PHOSPHATE_c">
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      <species metaid="M_CPD0__45__2030_c" id="M_CPD0__45__2030_c" name="glycerophosphoserine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H13NO8P">
        <notes>
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            <p>mass: 258.1436</p>
            <p>smiles: [NH3+][C@@H](COP([O-])(=O)OC[C@H](O)CO)C([O-])=O</p>
            <p>inchikey: ZWZWYGMENQVNFU-UHNVWZDZSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD0__45__2030_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H14NO8P/c7-5(6(10)11)3-15-16(12,13)14-2-4(9)1-8/h4-5,8-9H,1-3,7H2,(H,10,11)(H,12,13)/p-1/t4-,5+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__Phospho__45__terminated__45__DNAs_c" id="M_5__45__Phospho__45__terminated__45__DNAs_c" name="a 5&apos;-phospho-[DNA]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_3__45__terminal__45__unsaturated__45__sugars_c" id="M_3__45__terminal__45__unsaturated__45__sugars_c" name="a 3&apos;-terminal unsaturated sugar" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_THREO__45__3__45__HYDROXY__45__L__45__ASPARTATE_c" id="M_THREO__45__3__45__HYDROXY__45__L__45__ASPARTATE_c" name="(3S)-3-hydroxy-L-aspartate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H6NO5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 148.0947</p>
            <p>smiles: [NH3+][C@@H]([C@H](O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: YYLQUHNPNCGKJQ-LWMBPPNESA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_THREO__45__3__45__HYDROXY__45__L__45__ASPARTATE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__68_c" id="M_CPD__45__68_c" name="1-aminocyclopropane-1-carboxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 101.1039</p>
            <p>smiles: [NH3+]C1(CC1)C([O-])=O</p>
            <p>inchikey: PAJPWUMXBYXFCZ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__68_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H7NO2/c5-4(1-2-4)3(6)7/h1-2,5H2,(H,6,7)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_OCTAPRENYL__45__DIPHOSPHATE_c" id="M_OCTAPRENYL__45__DIPHOSPHATE_c" name="all-trans-octaprenyl diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C40H65O7P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 719.8891</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\COP([O-])(=O)OP([O-])([O-])=O</p>
            <p>inchikey: IKKLDISSULFFQO-DJMILUHSSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_OCTAPRENYL__45__DIPHOSPHATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C40H68O7P2/c1-33(2)17-10-18-34(3)19-11-20-35(4)21-12-22-36(5)23-13-24-37(6)25-14-26-38(7)27-15-28-39(8)29-16-30-40(9)31-32-46-49(44,45)47-48(41,42)43/h17,19,21,23,25,27,29,31H,10-16,18,20,22,24,26,28,30,32H2,1-9H3,(H,44,45)(H2,41,42,43)/p-3/b34-19+,35-21+,36-23+,37-25+,38-27+,39-29+,40-31+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__OCTAPRENYL__45__4__45__HYDROXYBENZOATE_c" id="M_3__45__OCTAPRENYL__45__4__45__HYDROXYBENZOATE_c" name="3-octaprenyl-4-hydroxybenzoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C47H69O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 682.0495</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\Cc1cc(ccc1O)C([O-])=O</p>
            <p>inchikey: UTIBHEBNILDQKX-LQOKPSQISA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__OCTAPRENYL__45__4__45__HYDROXYBENZOATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BUTANAL_c" id="M_BUTANAL_c" name="butan-1-al" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 72.1057</p>
            <p>smiles: [H]C(=O)CCC</p>
            <p>inchikey: ZTQSAGDEMFDKMZ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BUTANAL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H8O/c1-2-3-4-5/h4H,2-3H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_5__45__ALPHA__45__CHOLESTA__45__724__45__DIEN__45__3__45__BETA__45__OL_c" id="M_5__45__ALPHA__45__CHOLESTA__45__724__45__DIEN__45__3__45__BETA__45__OL_c" name="5&amp;alpha;-cholesta-7,24-dien-3&amp;beta;-ol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H44O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 384.6377</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])C3=CC[C@@]4([H])C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CCC=C(C)C</p>
            <p>inchikey: PKEPPDGGTSZLBL-SKCNUYALSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__ALPHA__45__CHOLESTA__45__724__45__DIEN__45__3__45__BETA__45__OL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C27H44O/c1-18(2)7-6-8-19(3)23-11-12-24-22-10-9-20-17-21(28)13-15-26(20,4)25(22)14-16-27(23,24)5/h7,10,19-21,23-25,28H,6,8-9,11-17H2,1-5H3/t19-,20+,21+,23-,24+,25+,26+,27-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD66__45__21_c" id="M_CPD66__45__21_c" name="leukotriene-D4" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C25H39N2O6S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 495.653</p>
            <p>smiles: CCCCC\C=C/C\C=C/C=C/C=C/[C@@H](SC[C@H]([NH3+])C(=O)NCC([O-])=O)[C@@H](O)CCCC([O-])=O</p>
            <p>inchikey: YEESKJGWJFYOOK-IJHYULJSSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD66__45__21_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C25H40N2O6S/c1-2-3-4-5-6-7-8-9-10-11-12-13-16-22(21(28)15-14-17-23(29)30)34-19-20(26)25(33)27-18-24(31)32/h6-7,9-13,16,20-22,28H,2-5,8,14-15,17-19,26H2,1H3,(H,27,33)(H,29,30)(H,31,32)/p-1/b7-6-,10-9-,12-11+,16-13+/t20-,21-,22+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BUTANOL_c" id="M_BUTANOL_c" name="butan-1-ol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H10O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 74.1216</p>
            <p>smiles: CCCCO</p>
            <p>inchikey: LRHPLDYGYMQRHN-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BUTANOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H10O/c1-2-3-4-5/h5H,2-4H2,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_LEUKOTRIENE__45__C4_c" id="M_LEUKOTRIENE__45__C4_c" name="leukotriene-C4" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C30H45N3O9S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 623.759</p>
            <p>smiles: CCCCC\C=C/C\C=C/C=C/C=C/[C@@H](SC[C@H](NC(=O)CC[C@H]([NH3+])C([O-])=O)C(=O)NCC([O-])=O)[C@@H](O)CCCC([O-])=O</p>
            <p>inchikey: GWNVDXQDILPJIG-NXOLIXFESA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_LEUKOTRIENE__45__C4_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_S__45__LACTOYL__45__GLUTATHIONE_c" id="M_S__45__LACTOYL__45__GLUTATHIONE_c" name="(R)-S-lactoylglutathione" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C13H20N3O8S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 378.379</p>
            <p>smiles: C[C@@H](O)C(=O)SC[C@H](NC(=O)CC[C@H]([NH3+])C([O-])=O)C(=O)NCC([O-])=O</p>
            <p>inchikey: VDYDCVUWILIYQF-CSMHCCOUSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_S__45__LACTOYL__45__GLUTATHIONE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C13H21N3O8S/c1-6(17)13(24)25-5-8(11(21)15-4-10(19)20)16-9(18)3-2-7(14)12(22)23/h6-8,17H,2-5,14H2,1H3,(H,15,21)(H,16,18)(H,19,20)(H,22,23)/p-1/t6-,7+,8+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__Methyl__45__Saturated__45__Fatty__45__Acyl__45__CoA_c" id="M_3__45__Methyl__45__Saturated__45__Fatty__45__Acyl__45__CoA_c" name="a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C26H39N7O17P3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C[*])CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
          </body>
        </notes>
      </species>
      <species metaid="M_3__45__Methyl__45__Saturated__45__Fatty__45__Acids_c" id="M_3__45__Methyl__45__Saturated__45__Fatty__45__Acids_c" name="a 3-methyl-branched 2,3,4-saturated fatty acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H8O2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(C[*])CC([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_2__45__Me__45__Branched__45__234__45__Sat__45__FALD_c" id="M_2__45__Me__45__Branched__45__234__45__Sat__45__FALD_c" name="a 2-methyl branched 2,3,4-saturated fatty aldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7OR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H]C(=O)C(C)C[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Retinols_c" id="M_Retinols_c" name="a retinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 286.4516</p>
            <p>smiles: C\C(=C/CO)\C=C\C=C(/C)\C=C\C1=C(C)CCCC1(C)C</p>
            <p>inchikey: FPIPGXGPPPQFEQ-OVSJKPMPSA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_Retinols_c">
              <bqbiol:isVersionOf>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 412.6908</p>
            <p>smiles: [H][C@@]1(CC[C@@]2(C)C3=C(CC[C@]12C)[C@@]1(C)CC[C@H](O)[C@@H](C)[C@]1([H])CC3)[C@H](C)CCC=C(C)C</p>
            <p>inchikey: KLZWTHGLLDRKHD-PMIIOQGLSA-N</p>
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        </notes>
        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 398.6642</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])C3=C(CC[C@]12C)[C@@]1(C)CC[C@H](O)[C@@H](C)[C@]1([H])CC3)[C@H](C)CCC=C(C)C</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 396.6484</p>
            <p>smiles: [H][C@@](C)(CCC=C(C)C)C1([H])CC=C2C3=C(CC[C@]12C)[C@@]1(C)CC[C@]([H])(O)[C@@]([H])(C)C1([H])CC3</p>
            <p>inchikey: QJVMEAZHJKXWJD-FEOMKCNXSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 398.6642</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])C3=CC[C@@]4([H])[C@H](C)[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CCC=C(C)C</p>
            <p>inchikey: MUPKQZRBZSOULX-SPONXPENSA-N</p>
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        </notes>
        <annotation>
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      <species metaid="M_CARBAMYUL__45__L__45__ASPARTATE_c" id="M_CARBAMYUL__45__L__45__ASPARTATE_c" name="N-carbamoyl-L-aspartate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H6N2O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 174.1126</p>
            <p>smiles: NC(=O)N[C@@H](CC([O-])=O)C([O-])=O</p>
            <p>inchikey: HLKXYZVTANABHZ-REOHCLBHSA-L</p>
          </body>
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        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 299.4692</p>
            <p>smiles: OCCCCCCCCCCCCCCCCCC([O-])=O</p>
            <p>inchikey: VLHZUYUOEGBBJB-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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        </annotation>
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      <species metaid="M_18__45__HYDROXYOLEATE_c" id="M_18__45__HYDROXYOLEATE_c" name="18-hydroxyoleate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H33O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 297.4534</p>
            <p>smiles: OCCCCCCCC\C=C/CCCCCCCC([O-])=O</p>
            <p>inchikey: LQUHZVLTTWMBTO-UPHRSURJSA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1043.95</p>
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            <p>inchikey: MQACSUXWIYYZAK-UTNXWDCOSA-J</p>
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      <species metaid="M_Very__45__long__45__chain__45__fatty__45__acids_c" id="M_Very__45__long__45__chain__45__fatty__45__acids_c" name="a very-long-chain fatty acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="CO2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C([*])=O</p>
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        </notes>
      </species>
      <species metaid="M_VERY__45__LONG__45__CHAIN__45__FATTY__45__ACYL__45__COA_c" id="M_VERY__45__LONG__45__CHAIN__45__FATTY__45__ACYL__45__COA_c" name="a very long chain fatty acyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_OCTADEC__45__9__45__ENE__45__118__45__DIOIC__45__ACID_c" id="M_OCTADEC__45__9__45__ENE__45__118__45__DIOIC__45__ACID_c" name="&amp;alpha;,&amp;omega;-9Z-octadecenedioate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C18H30O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 310.4295</p>
            <p>smiles: [H]\C(CCCCCCCC([O-])=O)=C(/[H])CCCCCCCC([O-])=O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1056.926</p>
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            <p>inchikey: IISWKVFHQLAOMW-BTFUZUOASA-I</p>
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        </annotation>
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      <species metaid="M_Guanine46__45__in__45__tRNA_c" id="M_Guanine46__45__in__45__tRNA_c" name="a guanine46 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_XANTHOSINE_c" id="M_XANTHOSINE_c" name="xanthosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 284.2255</p>
            <p>smiles: OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1cnc2c1[nH]c(=O)[nH]c2=O</p>
            <p>inchikey: UBORTCNDUKBEOP-UUOKFMHZSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.1299</p>
            <p>smiles: OC[C@@H](O)[C@H](O)C(=O)CO</p>
            <p>inchikey: ZAQJHHRNXZUBTE-WUJLRWPWSA-N</p>
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      <species metaid="M_Pyruvate__45__dehydrogenase__45__dihydrolipoate_c" id="M_Pyruvate__45__dehydrogenase__45__dihydrolipoate_c" name="a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H16OS2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_GUANOSINE_c" id="M_GUANOSINE_c" name="guanosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 283.2407</p>
            <p>smiles: Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O</p>
            <p>inchikey: NYHBQMYGNKIUIF-UUOKFMHZSA-N</p>
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                </rdf:Bag>
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      <species metaid="M_CPD__45__6993_c" id="M_CPD__45__6993_c" name="pinocembrin chalcone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H11O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 255.246</p>
            <p>smiles: Oc1cc(O)c(C(=O)\C=C\c2ccccc2)c([O-])c1</p>
            <p>inchikey: LOYXTWZXLWHMBX-VOTSOKGWSA-M</p>
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        </notes>
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      <species metaid="M_CPD__45__8646_c" id="M_CPD__45__8646_c" name="7-dehydrodesmosterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H42O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 382.6218</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])C3=CC=C4C[C@@H](O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)[C@H](C)CCC=C(C)C</p>
            <p>inchikey: RUSSPKPUXDSHNC-DDPQNLDTSA-N</p>
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      <species metaid="M_CPD__45__12902_c" id="M_CPD__45__12902_c" name="5-methylhex-4-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C28H42N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 873.658</p>
            <p>smiles: CC(C)=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: BEYYLHUMFMWPLH-AXEMQUGESA-J</p>
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        </notes>
        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 915.695</p>
            <p>smiles: CC(C)=CCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: LPMIXVANMSEERY-FUEUKBNZSA-J</p>
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      <species metaid="M_OXALATE_c" id="M_OXALATE_c" name="oxalate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C2O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 88.0201</p>
            <p>smiles: [O-]C(=O)C([O-])=O</p>
            <p>inchikey: MUBZPKHOEPUJKR-UHFFFAOYSA-L</p>
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            <rdf:Description rdf:about="#M_OXALATE_c">
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                <rdf:Bag>
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      <species metaid="M_CPD__45__12905_c" id="M_CPD__45__12905_c" name="3-hydroxy-5-methylhex-4-enoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C28H42N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 889.658</p>
            <p>smiles: CC(C)=CC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: OLZYNLSKRKFUJC-GPZVIVARSA-J</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD__45__12904_c" id="M_CPD__45__12904_c" name="(2E)-5-methylhexa-2,4-dienoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C28H40N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 871.642</p>
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            <p>inchikey: IFMYVRQEHQTINS-DKIDORRISA-J</p>
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        <annotation>
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      <species metaid="M_CPD__45__12906_c" id="M_CPD__45__12906_c" name="5-methyl-3-oxo-4-hexenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C28H40N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 887.642</p>
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            <p>inchikey: ZFKZVSUJTDSJEY-AXEMQUGESA-J</p>
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      <species metaid="M_DsrC__45__persulfides_c" id="M_DsrC__45__persulfides_c" name="DsrC-persulfides" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_N5__45__Formyl__45__THF__45__Glu__45__N_c" id="M_N5__45__Formyl__45__THF__45__Glu__45__N_c" name="a (6S)-5-formyltetrahydrofolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H21N7O6R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H]C(=O)N1c2c(NC[C@]1([H])CNc1ccc(cc1)C(=O)N[C@@H](CCC([*])=O)C([O-])=O)nc(N)[nH]c2=O</p>
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      </species>
      <species metaid="M_R2OH__45__Straight__45__Chain__45__234__45__Sat__45__FA_c" id="M_R2OH__45__Straight__45__Chain__45__234__45__Sat__45__FA_c" name="a (2R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H6O3R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: O[C@H](CC[*])C([O-])=O</p>
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      <species metaid="M_Odd__45__Straight__45__Chain__45__234__45__Sat__45__FA_c" id="M_Odd__45__Straight__45__Chain__45__234__45__Sat__45__FA_c" name="an odd numbered straight chain 2,3,4-saturated fatty acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H4O2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)CC[*]</p>
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        </notes>
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      <species metaid="M_Odd__45__Straight__45__Chain__45__234__45__Sat__45__FALD_c" id="M_Odd__45__Straight__45__Chain__45__234__45__Sat__45__FALD_c" name="an odd numbered straight chain 2,3,4-saturated fatty aldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5OR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H]C(=O)CC[*]</p>
          </body>
        </notes>
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      <species metaid="M_PHYTOL_c" id="M_PHYTOL_c" name="phytol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H40O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 296.531</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC\C(C)=C\CO</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 999.897</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1015.897</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 325.2978</p>
            <p>smiles: Cc1nc2c(nc(=O)[n-]c2=O)n(C[C@H](O)[C@H](O)[C@H](O)CO)c1C</p>
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      <species metaid="M_AMINO__45__RIBOSYLAMINO__45__1H__45__3H__45__PYR__45__DIONE_c" id="M_AMINO__45__RIBOSYLAMINO__45__1H__45__3H__45__PYR__45__DIONE_c" name="5-amino-6-(D-ribitylamino)uracil" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H16N4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 276.2465</p>
            <p>smiles: Nc1c(NC[C@H](O)[C@H](O)[C@H](O)CO)[nH]c(=O)[nH]c1=O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_N__45__terminal__45__Amino__45__Acids_c" id="M_N__45__terminal__45__Amino__45__Acids_c" name="an N-terminal amino acyl-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_N__45__Alpha__45__Acetylated__45__N__45__terminal__45__Amino__45__Acid_c" id="M_N__45__Alpha__45__Acetylated__45__N__45__terminal__45__Amino__45__Acid_c" name="N-Alpha-Acetylated-N-terminal-Amino-Acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Protein__45__L__45__Aspartates_c" id="M_Protein__45__L__45__Aspartates_c" name="a [protein]-L-aspartate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 697.0835</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 683.0569</p>
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      <species metaid="M_CPD__45__6991_c" id="M_CPD__45__6991_c" name="(2S)-pinocembrin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 256.2534</p>
            <p>smiles: Oc1cc(O)c2C(=O)C[C@H](Oc2c1)c1ccccc1</p>
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      <species metaid="M_CPD__45__6992_c" id="M_CPD__45__6992_c" name="(+)-pinobanksin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 272.2528</p>
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            <p>inchikey: SUYJZKRQHBQNCA-LSDHHAIUSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 887.441</p>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__7014_c" id="M_CPD__45__7014_c" name="chlorophyllide b" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C35H30MgN4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 626.942</p>
            <p>smiles: CCC1=C(C=O)C2=[N+]3C1=Cc1c(C)c4C(=O)[C-](C(=O)OC)C5=C6[C@@H](CCC([O-])=O)[C@H](C)C7=[N+]6[Mg--]3(n1c45)n1c(=C7)c(C)c(C=C)c1=C2</p>
            <p>inchikey: WSVKRUWOLPKKOO-XXRBRTKDSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__7013_c" id="M_CPD__45__7013_c" name="geranylgeranyl chlorophyll b" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C55H64MgN4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 901.439</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CHLOROPHYLL__45__B_c" id="M_CHLOROPHYLL__45__B_c" name="chlorophyll b" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C55H69MgN4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 906.465</p>
            <p>smiles: CCC1=C(C=O)C2=[N+]3C1=Cc1c(C)c4C(=O)[C-](C(=O)OC)C5=C6[C@@H](CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)[C@H](C)C7=[N+]6[Mg--]3(n1c45)n1c(=C7)c(C)c(C=C)c1=C2</p>
            <p>inchikey: WMNTZEAJBUMETR-YKKLGNEQSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CHLOROPHYLL__45__B_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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      </species>
      <species metaid="M_7__45__AMINOMETHYL__45__7__45__DEAZAGUANINE_c" id="M_7__45__AMINOMETHYL__45__7__45__DEAZAGUANINE_c" name="preQ1" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C7H10N5O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1867</p>
            <p>smiles: Nc1nc2[nH]cc(C[NH3+])c2c(=O)[nH]1</p>
            <p>inchikey: MEYMBLGOKYDGLZ-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_7__45__AMINOMETHYL__45__7__45__DEAZAGUANINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_Guanine34__45__in__45__tRNAs_c" id="M_Guanine34__45__in__45__tRNAs_c" name="a guanine34 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_tRNA__45__with__45__7__45__aminomethyl__45__7__45__deazaguanine_c" id="M_tRNA__45__with__45__7__45__aminomethyl__45__7__45__deazaguanine_c" name="a 7-aminomethyl-7-deazaguanosine34 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ACP_C__45__BOUNDARY" id="M_ACP_C__45__BOUNDARY" name="a soluble [acyl-carrier protein]" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0" fbc:chemicalFormula="HSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_ACP_e" id="M_ACP_e" name="a soluble [acyl-carrier protein]" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="HSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_ADENOSYLCOBALAMIN_C__45__BOUNDARY" id="M_ADENOSYLCOBALAMIN_C__45__BOUNDARY" name="adenosylcobalamin" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H100CoN18O17P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1579.5818</p>
            <p>smiles: [Co-3]1234(C[C@@H]5[C@H]([C@H]([C@H](n6cnc7c(ncnc67)N)O5)O)O)[N+]5=C6C(=C7[C@](C)(CCC(=O)NC[C@H](OP(=O)([O-])O[C@@H]8[C@@H](CO)O[C@@H]([C@@H]8O)n8c[n+]1c1c8cc(c(C)c1)C)C)[C@@H](CC(=O)N)[C@@]([C@]1([C@@](C)(CC(=O)N)[C@@H](C(C(C)=C8[N+]2=C(C=C5C(C)(C)[C@@H]6CCC(=O)N)[C@@H](CCC(=O)N)[C@]8(C)CC(=O)N)=[N+]31)CCC(=O)N)C)([H])N47)C</p>
            <p>inchikey: ZIHHMGTYZOSFRC-OUCXYWSSSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        </annotation>
      </species>
      <species metaid="M_ADENOSYLCOBALAMIN_e" id="M_ADENOSYLCOBALAMIN_e" name="adenosylcobalamin" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H100CoN18O17P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1579.5818</p>
            <p>smiles: [Co-3]1234(C[C@@H]5[C@H]([C@H]([C@H](n6cnc7c(ncnc67)N)O5)O)O)[N+]5=C6C(=C7[C@](C)(CCC(=O)NC[C@H](OP(=O)([O-])O[C@@H]8[C@@H](CO)O[C@@H]([C@@H]8O)n8c[n+]1c1c8cc(c(C)c1)C)C)[C@@H](CC(=O)N)[C@@]([C@]1([C@@](C)(CC(=O)N)[C@@H](C(C(C)=C8[N+]2=C(C=C5C(C)(C)[C@@H]6CCC(=O)N)[C@@H](CCC(=O)N)[C@]8(C)CC(=O)N)=[N+]31)CCC(=O)N)C)([H])N47)C</p>
            <p>inchikey: ZIHHMGTYZOSFRC-OUCXYWSSSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_ADP_C__45__BOUNDARY" id="M_ADP_C__45__BOUNDARY" name="ADP" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 424.1789</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XTWYTFMLZFPYCI-KQYNXXCUSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_ADP_e" id="M_ADP_e" name="ADP" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 424.1789</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: XTWYTFMLZFPYCI-KQYNXXCUSA-K</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ADP_e">
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      <species metaid="M_AMMONIA_C__45__BOUNDARY" id="M_AMMONIA_C__45__BOUNDARY" name="ammonia" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="1" fbc:chemicalFormula="H4N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 18.0379</p>
            <p>smiles: [H][N+]([H])([H])[H]</p>
            <p>inchikey: QGZKDVFQNNGYKY-UHFFFAOYSA-O</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AMMONIA_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H3N/h1H3/p+1"/>
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      <species metaid="M_CPD__45__9007_c" id="M_CPD__45__9007_c" name="CPD-9007" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C15H19N5O16P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 618.2582</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@@H]3OP([O-])(=O)O[C@@H]3[C@@H]2O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: NPSPRYXPOGPCPM-KEOHHSTQSA-K</p>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_AMMONIA_e" id="M_AMMONIA_e" name="ammonia" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="H4N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 18.0379</p>
            <p>smiles: [H][N+]([H])([H])[H]</p>
            <p>inchikey: QGZKDVFQNNGYKY-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AMMONIA_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H3N/h1H3/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_AMP_C__45__BOUNDARY" id="M_AMP_C__45__BOUNDARY" name="AMP" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 345.2064</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: UDMBCSSLTHHNCD-KQYNXXCUSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AMP_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/p-2/t4-,6-,7-,10-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_AMP_e" id="M_AMP_e" name="AMP" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 345.2064</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: UDMBCSSLTHHNCD-KQYNXXCUSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AMP_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/p-2/t4-,6-,7-,10-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2__45__phospho__45__ligated__45__tRNA_c" id="M_2__45__phospho__45__ligated__45__tRNA_c" name="2-phospho-ligated-tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ATP_C__45__BOUNDARY" id="M_ATP_C__45__BOUNDARY" name="ATP" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O13P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 503.1515</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: ZKHQWZAMYRWXGA-KQYNXXCUSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ATP_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/p-4/t4-,6-,7-,10-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ATP_e" id="M_ATP_e" name="ATP" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O13P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 503.1515</p>
            <p>smiles: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: ZKHQWZAMYRWXGA-KQYNXXCUSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ATP_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/p-4/t4-,6-,7-,10-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Acceptor_C__45__BOUNDARY" id="M_Acceptor_C__45__BOUNDARY" name="an oxidized electron acceptor" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Acceptor_e" id="M_Acceptor_e" name="an oxidized electron acceptor" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_BIOTIN_C__45__BOUNDARY" id="M_BIOTIN_C__45__BOUNDARY" name="biotin" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H15N2O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 243.303</p>
            <p>smiles: [H][C@]12CS[C@@H](CCCCC([O-])=O)[C@@]1([H])NC(=O)N2</p>
            <p>inchikey: YBJHBAHKTGYVGT-ZKWXMUAHSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BIOTIN_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N2O3S/c13-8(14)4-2-1-3-7-9-6(5-16-7)11-10(15)12-9/h6-7,9H,1-5H2,(H,13,14)(H2,11,12,15)/p-1/t6-,7-,9-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BIOTIN_e" id="M_BIOTIN_e" name="biotin" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H15N2O3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 243.303</p>
            <p>smiles: [H][C@]12CS[C@@H](CCCCC([O-])=O)[C@@]1([H])NC(=O)N2</p>
            <p>inchikey: YBJHBAHKTGYVGT-ZKWXMUAHSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BIOTIN_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N2O3S/c13-8(14)4-2-1-3-7-9-6(5-16-7)11-10(15)12-9/h6-7,9H,1-5H2,(H,13,14)(H2,11,12,15)/p-1/t6-,7-,9-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Non__45__Galactosylated__45__Galactose__45__Acceptors_c" id="M_Non__45__Galactosylated__45__Galactose__45__Acceptors_c" name="a non galactosylated galactose acceptor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Alpha__45__D__45__Galactosides_c" id="M_Alpha__45__D__45__Galactosides_c" name="an &amp;alpha;-D-galactoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O6R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@H](O[*])[C@H](O)[C@@H](O)[C@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CA__43__2_C__45__BOUNDARY" id="M_CA__43__2_C__45__BOUNDARY" name="CA+2" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="2" fbc:chemicalFormula="Ca">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 40.077</p>
            <p>smiles: [Ca++]</p>
            <p>inchikey: BHPQYMZQTOCNFJ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CA__43__2_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Ca/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CA__43__2_e" id="M_CA__43__2_e" name="CA+2" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Ca">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 40.077</p>
            <p>smiles: [Ca++]</p>
            <p>inchikey: BHPQYMZQTOCNFJ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CA__43__2_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Ca/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CARBON__45__DIOXIDE_C__45__BOUNDARY" id="M_CARBON__45__DIOXIDE_C__45__BOUNDARY" name="CO2" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 44.0095</p>
            <p>smiles: O=C=O</p>
            <p>inchikey: CURLTUGMZLYLDI-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CARBON__45__DIOXIDE_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CO2/c2-1-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__14926_c" id="M_CPD__45__14926_c" name="phytenal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H38O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 294.5151</p>
            <p>smiles: [H]C(=O)\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C</p>
            <p>inchikey: RAFZYSUICBQABU-PYDDKJGSSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__14926_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H38O/c1-17(2)9-6-10-18(3)11-7-12-19(4)13-8-14-20(5)15-16-21/h15-19H,6-14H2,1-5H3/b20-15+/t18-,19-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__14927_c" id="M_CPD__45__14927_c" name="phytenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H37O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 309.5071</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC\C(C)=C\C([O-])=O</p>
            <p>inchikey: WDWBNNBRPVEEOD-PFXVRADUSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__14927_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H38O2/c1-16(2)9-6-10-17(3)11-7-12-18(4)13-8-14-19(5)15-20(21)22/h15-18H,6-14H2,1-5H3,(H,21,22)/p-1/b19-15+/t17-,18-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__14928_c" id="M_CPD__45__14928_c" name="phytenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C41H68N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1056.004</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC\C(C)=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: NYZPDFUAZACYOT-PEAQSEFFSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C41H72N7O17P3S/c1-26(2)11-8-12-27(3)13-9-14-28(4)15-10-16-29(5)21-32(50)69-20-19-43-31(49)17-18-44-39(53)36(52)41(6,7)23-62-68(59,60)65-67(57,58)61-22-30-35(64-66(54,55)56)34(51)40(63-30)48-25-47-33-37(42)45-24-46-38(33)48/h21,24-28,30,34-36,40,51-52H,8-20,22-23H2,1-7H3,(H,43,49)(H,44,53)(H,57,58)(H,59,60)(H2,42,45,46)(H2,54,55,56)/p-4/b29-21+/t27-,28-,30-,34-,35-,36+,40-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__560_c" id="M_CPD__45__560_c" name="5-(methylsulfanyl)-&amp;alpha;-D-ribose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O4S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.222</p>
            <p>smiles: CSC[C@@H](O)[C@@H](O)[C@@H](O)C=O</p>
            <p>inchikey: ACWASDPGAVYCNI-JKUQZMGJSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__560_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O4S/c1-11-3-5(9)6(10)4(8)2-7/h2,4-6,8-10H,3H2,1H3/t4-,5+,6-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Ribonucleosides_c" id="M_Ribonucleosides_c" name="a ribonucleoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O4R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H]([*])[C@H](O)[C@@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Ribonucleoside__45__Monophosphates_c" id="M_Ribonucleoside__45__Monophosphates_c" name="a ribonucleoside 5&apos;-monophosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5__45__OXOPROLINE_c" id="M_5__45__OXOPROLINE_c" name="5-oxo-L-proline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H6NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 128.1066</p>
            <p>smiles: [O-]C(=O)[C@@H]1CCC(=O)N1</p>
            <p>inchikey: ODHCTXKNWHHXJC-VKHMYHEASA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__OXOPROLINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H7NO3/c7-4-2-1-3(6-4)5(8)9/h3H,1-2H2,(H,6,7)(H,8,9)/p-1/t3-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__602_c" id="M_CPD__45__602_c" name="5-amino-6-(5-phospho-D-ribosylamino)uracil" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C9H13N4O9P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 352.1958</p>
            <p>smiles: Nc1c(N[C@@H]2O[C@H](COP([O-])([O-])=O)[C@@H](O)[C@H]2O)[nH]c(=O)[nH]c1=O</p>
            <p>inchikey: LZEXYCAGPMYXLX-UMMCILCDSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__602_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H15N4O9P/c10-3-6(12-9(17)13-7(3)16)11-8-5(15)4(14)2(22-8)1-21-23(18,19)20/h2,4-5,8,14-15H,1,10H2,(H2,18,19,20)(H3,11,12,13,16,17)/p-2/t2-,4-,5-,8-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__Ribofuranose_c" id="M_D__45__Ribofuranose_c" name="D-ribofuranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.1299</p>
            <p>smiles: OC[C@H]1OC(O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: HMFHBZSHGGEWLO-SOOFDHNKSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_D__45__Ribofuranose_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3-,4-,5?/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__17815_c" id="M_CPD__45__17815_c" name="(11Z)-3-oxo-hexadecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H58N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1013.881</p>
            <p>smiles: CCCC\C=C/CCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: LGTVDWICXIBIOI-UBPKJMQESA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__17815_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__17464_c" id="M_CPD__45__17464_c" name="(9Z)-tetradecenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C35H56N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 971.844</p>
            <p>smiles: CCCC\C=C/CCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: GIIFECKTWKZXGU-FJXLYLFVSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__17464_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C35H60N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-26(44)63-19-18-37-25(43)16-17-38-33(47)30(46)35(2,3)21-56-62(53,54)59-61(51,52)55-20-24-29(58-60(48,49)50)28(45)34(57-24)42-23-41-27-31(36)39-22-40-32(27)42/h7-8,22-24,28-30,34,45-46H,4-6,9-21H2,1-3H3,(H,37,43)(H,38,47)(H,51,52)(H,53,54)(H2,36,39,40)(H2,48,49,50)/p-4/b8-7-/t24-,28-,29-,30+,34-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__5164_e" id="M_CPD__45__5164_e" name="&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;3)-[&amp;alpha;-D-Man-(1&amp;rarr;6)]-&amp;beta;-D-Man-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;4)-&amp;alpha;-D-GlcNAc-diphosphodolichol" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__5164_c" id="M_CPD__45__5164_c" name="&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;3)-[&amp;alpha;-D-Man-(1&amp;rarr;6)]-&amp;beta;-D-Man-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;4)-&amp;alpha;-D-GlcNAc-diphosphodolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__166_e" id="M_CPD__45__166_e" name="a dolichyl &amp;beta;-D-glucosyl phosphate" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__171_e" id="M_CPD__45__171_e" name="a dolichyl &amp;beta;-D-mannosyl phosphate" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CARBON__45__DIOXIDE_e" id="M_CARBON__45__DIOXIDE_e" name="CO2" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 44.0095</p>
            <p>smiles: O=C=O</p>
            <p>inchikey: CURLTUGMZLYLDI-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CARBON__45__DIOXIDE_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/CO2/c2-1-3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CL__45___C__45__BOUNDARY" id="M_CL__45___C__45__BOUNDARY" name="chloride" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-1" fbc:chemicalFormula="Cl">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 35.454</p>
            <p>smiles: [Cl-]</p>
            <p>inchikey: VEXZGXHMUGYJMC-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CL__45___C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/ClH/h1H/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CL__45___e" id="M_CL__45___e" name="chloride" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="Cl">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 35.454</p>
            <p>smiles: [Cl-]</p>
            <p>inchikey: VEXZGXHMUGYJMC-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CL__45___e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/ClH/h1H/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CO__43__2_C__45__BOUNDARY" id="M_CO__43__2_C__45__BOUNDARY" name="CO+2" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="2" fbc:chemicalFormula="Co">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 58.9321</p>
            <p>smiles: [Co++]</p>
            <p>inchikey: XLJKHNWPARRRJB-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CO__43__2_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Co/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CO__43__2_e" id="M_CO__43__2_e" name="CO+2" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Co">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 58.9321</p>
            <p>smiles: [Co++]</p>
            <p>inchikey: XLJKHNWPARRRJB-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CO__43__2_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Co/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_COB__45__I__45__ALAMIN_C__45__BOUNDARY" id="M_COB__45__I__45__ALAMIN_C__45__BOUNDARY" name="cob(I)alamin" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-1" fbc:chemicalFormula="C62H88CoN13O14P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1329.3483</p>
            <p>smiles: [H][C@]12[C@H](CC(N)=O)[C@@]3(C)CCC(=O)NC[C@@H](C)OP([O-])(=O)O[C@H]4[C@@H](O)[C@H](O[C@@H]4CO)n4c[n+](c5cc(C)c(C)cc45)[Co-4]456N1C3=C(C)C1=[N+]4C(=CC3=[N+]5C(=C(C)C4=[N+]6[C@]2(C)[C@@](C)(CC(N)=O)[C@@H]4CCC(N)=O)[C@@](C)(CC(N)=O)[C@@H]3CCC(N)=O)C(C)(C)[C@@H]1CCC(N)=O</p>
            <p>inchikey: OMAOKVYASDIYQG-DSRCUDDDSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_COB__45__I__45__ALAMIN_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C62H90N13O14P.Co/c1-29-20-39-40(21-30(29)2)75(28-70-39)57-52(84)53(41(27-76)87-57)89-90(85,86)88-31(3)26-69-49(83)18-19-59(8)37(22-46(66)80)56-62(11)61(10,25-48(68)82)36(14-17-45(65)79)51(74-62)33(5)55-60(9,24-47(67)81)34(12-15-43(63)77)38(71-55)23-42-58(6,7)35(13-16-44(64)78)50(72-42)32(4)54(59)73-56;/h20-21,23,28,31,34-37,41,52-53,56-57,76,84H,12-19,22,24-27H2,1-11H3,(H15,63,64,65,66,67,68,69,71,72,73,74,77,78,79,80,81,82,83,85,86);/q;+1/p-2/t31-,34-,35-,36-,37+,41-,52-,53-,56-,57+,59-,60+,61+,62+;/m1./s1"/>
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              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_COB__45__I__45__ALAMIN_e" id="M_COB__45__I__45__ALAMIN_e" name="cob(I)alamin" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C62H88CoN13O14P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1329.3483</p>
            <p>smiles: [H][C@]12[C@H](CC(N)=O)[C@@]3(C)CCC(=O)NC[C@@H](C)OP([O-])(=O)O[C@H]4[C@@H](O)[C@H](O[C@@H]4CO)n4c[n+](c5cc(C)c(C)cc45)[Co-4]456N1C3=C(C)C1=[N+]4C(=CC3=[N+]5C(=C(C)C4=[N+]6[C@]2(C)[C@@](C)(CC(N)=O)[C@@H]4CCC(N)=O)[C@@](C)(CC(N)=O)[C@@H]3CCC(N)=O)C(C)(C)[C@@H]1CCC(N)=O</p>
            <p>inchikey: OMAOKVYASDIYQG-DSRCUDDDSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_COB__45__I__45__ALAMIN_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__3_C__45__BOUNDARY" id="M_CPD__45__3_C__45__BOUNDARY" name="molybdate" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-2" fbc:chemicalFormula="MoO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 159.94</p>
            <p>smiles: [O-][Mo]([O-])(=O)=O</p>
            <p>inchikey: MEFBJEMVZONFCJ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__3_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Mo.4O/q;;;2*-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__3_e" id="M_CPD__45__3_e" name="molybdate" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="MoO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 159.94</p>
            <p>smiles: [O-][Mo]([O-])(=O)=O</p>
            <p>inchikey: MEFBJEMVZONFCJ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__3_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Mo.4O/q;;;2*-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__315_C__45__BOUNDARY" id="M_CPD__45__315_C__45__BOUNDARY" name="cyanocob(III)alamin" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0" fbc:chemicalFormula="C63H88CoN14O14P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1355.3652</p>
            <p>smiles: N12C3=C(C4=[N+]5C(C(C)(C)[C@@H]4CCC(N)=O)=CC4=[N+]6C(=C(C7=[N+]8[C@@]([C@@]1([H])[C@@H]([C@@]3(C)CCC(=O)NC[C@@]([H])(C)OP([O-])(=O)O[C@@H]1[C@@H](CO)O[C@H](n3c9c([n+]([Co-3]2568C#N)c3)cc(c(C)c9)C)[C@@H]1O)CC(N)=O)([C@@](C)(CC(N)=O)[C@@H]7CCC(N)=O)C)C)[C@@](C)(CC(N)=O)[C@@H]4CCC(N)=O)C</p>
            <p>inchikey: RMRCNWBMXRMIRW-WZHZPDAFSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__315_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__315_e" id="M_CPD__45__315_e" name="cyanocob(III)alamin" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C63H88CoN14O14P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1355.3652</p>
            <p>smiles: N12C3=C(C4=[N+]5C(C(C)(C)[C@@H]4CCC(N)=O)=CC4=[N+]6C(=C(C7=[N+]8[C@@]([C@@]1([H])[C@@H]([C@@]3(C)CCC(=O)NC[C@@]([H])(C)OP([O-])(=O)O[C@@H]1[C@@H](CO)O[C@H](n3c9c([n+]([Co-3]2568C#N)c3)cc(c(C)c9)C)[C@@H]1O)CC(N)=O)([C@@](C)(CC(N)=O)[C@@H]7CCC(N)=O)C)C)[C@@](C)(CC(N)=O)[C@@H]4CCC(N)=O)C</p>
            <p>inchikey: RMRCNWBMXRMIRW-WZHZPDAFSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__315_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_CU__43___C__45__BOUNDARY" id="M_CU__43___C__45__BOUNDARY" name="CU+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="1" fbc:chemicalFormula="Cu">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 63.545</p>
            <p>smiles: [Cu+]</p>
            <p>inchikey: VMQMZMRVKUZKQL-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CU__43___C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Cu/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CU__43___e" id="M_CU__43___e" name="CU+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="Cu">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 63.545</p>
            <p>smiles: [Cu+]</p>
            <p>inchikey: VMQMZMRVKUZKQL-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CU__43___e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Cu/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CU__43__2_C__45__BOUNDARY" id="M_CU__43__2_C__45__BOUNDARY" name="CU+2" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="2" fbc:chemicalFormula="Cu">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 63.545</p>
            <p>smiles: [Cu++]</p>
            <p>inchikey: JPVYNHNXODAKFH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CU__43__2_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Cu/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CU__43__2_e" id="M_CU__43__2_e" name="CU+2" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Cu">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 63.545</p>
            <p>smiles: [Cu++]</p>
            <p>inchikey: JPVYNHNXODAKFH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CU__43__2_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Cu/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Donor__45__H2_C__45__BOUNDARY" id="M_Donor__45__H2_C__45__BOUNDARY" name="a reduced electron acceptor" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Donor__45__H2_e" id="M_Donor__45__H2_e" name="a reduced electron acceptor" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_EDTA_C__45__BOUNDARY" id="M_EDTA_C__45__BOUNDARY" name="EDTA" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H14N2O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 290.2279</p>
            <p>smiles: [O-]C(=O)C[NH+](CC[NH+](CC([O-])=O)CC([O-])=O)CC([O-])=O</p>
            <p>inchikey: KCXVZYZYPLLWCC-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_EDTA_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N2O8/c13-7(14)3-11(4-8(15)16)1-2-12(5-9(17)18)6-10(19)20/h1-6H2,(H,13,14)(H,15,16)(H,17,18)(H,19,20)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_EDTA_e" id="M_EDTA_e" name="EDTA" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H14N2O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 290.2279</p>
            <p>smiles: [O-]C(=O)C[NH+](CC[NH+](CC([O-])=O)CC([O-])=O)CC([O-])=O</p>
            <p>inchikey: KCXVZYZYPLLWCC-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_EDTA_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16N2O8/c13-7(14)3-11(4-8(15)16)1-2-12(5-9(17)18)6-10(19)20/h1-6H2,(H,13,14)(H,15,16)(H,17,18)(H,19,20)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_FE__43__2_C__45__BOUNDARY" id="M_FE__43__2_C__45__BOUNDARY" name="Fe2+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="2" fbc:chemicalFormula="Fe">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 55.844</p>
            <p>smiles: [Fe++]</p>
            <p>inchikey: CWYNVVGOOAEACU-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FE__43__2_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Fe/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_FE__43__2_e" id="M_FE__43__2_e" name="Fe2+" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Fe">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 55.844</p>
            <p>smiles: [Fe++]</p>
            <p>inchikey: CWYNVVGOOAEACU-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FE__43__2_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Fe/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_FE__43__3_C__45__BOUNDARY" id="M_FE__43__3_C__45__BOUNDARY" name="Fe3+" compartment="C__45__BOUNDARY" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="true" constant="false" fbc:charge="3" fbc:chemicalFormula="Fe">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 55.843</p>
            <p>smiles: [Fe+3]</p>
            <p>inchikey: VTLYFUHAOXGGBS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FE__43__3_C__45__BOUNDARY">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Fe/q+3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MN__43__2_c" id="M_MN__43__2_c" name="Mn2+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Mn">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 54.93695</p>
            <p>smiles: [Mn++]</p>
            <p>inchikey: WAEMQWOKJMHJLA-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MN__43__2_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Mn/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Heme__45__b_c" id="M_Heme__45__b_c" name="heme b" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H30FeN4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 614.471</p>
            <p>smiles: CC1=C(CCC([O-])=O)C2=[N+]3C1=Cc1c(C)c(C=C)c4C=C5C(C)=C(C=C)C6=[N+]5[Fe]3(n14)n1c(=C6)c(C)c(CCC([O-])=O)c1=C2</p>
            <p>inchikey: YHLKGEDAGPGZPN-RGGAHWMASA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_Heme__45__b_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Heme__45__b_e" id="M_Heme__45__b_e" name="heme b" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H30FeN4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 614.471</p>
            <p>smiles: CC1=C(CCC([O-])=O)C2=[N+]3C1=Cc1c(C)c(C=C)c4C=C5C(C)=C(C=C)C6=[N+]5[Fe]3(n14)n1c(=C6)c(C)c(CCC([O-])=O)c1=C2</p>
            <p>inchikey: YHLKGEDAGPGZPN-RGGAHWMASA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_Heme__45__b_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+4/p-4/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Peptides__45__holder_e" id="M_Peptides__45__holder_e" name="a peptide" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ARACHIDONIC_ACID_c" id="M_ARACHIDONIC_ACID_c" name="arachidonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H31O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 303.4595</p>
            <p>smiles: CCCCC\C=C/C\C=C/C\C=C/C\C=C/CCCC([O-])=O</p>
            <p>inchikey: YZXBAPSDXZZRGB-DOFZRALJSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ARACHIDONIC_ACID_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(21)22/h6-7,9-10,12-13,15-16H,2-5,8,11,14,17-19H2,1H3,(H,21,22)/p-1/b7-6-,10-9-,13-12-,16-15-"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__824_c" id="M_CPD__45__824_c" name="CPD-824" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11N3O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 173.1698</p>
            <p>smiles: NC(=[NH2+])NCCCC(=O)C([O-])=O</p>
            <p>inchikey: ARBHXJXXVVHMET-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__824_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H11N3O3/c7-6(8)9-3-1-2-4(10)5(11)12/h1-3H2,(H,11,12)(H4,7,8,9)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_TDP_c" id="M_TDP_c" name="dTDP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H13N2O11P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 399.1662</p>
            <p>smiles: Cc1cn([C@H]2C[C@H](O)[C@@H](COP([O-])(=O)OP([O-])([O-])=O)O2)c(=O)[nH]c1=O</p>
            <p>inchikey: UJLXYODCHAELLY-XLPZGREQSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_TDP_c">
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                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DTDP__45__DEOH__45__DEOXY__45__GLUCOSE_c" id="M_DTDP__45__DEOH__45__DEOXY__45__GLUCOSE_c" name="dTDP-4-dehydro-6-deoxy-&amp;alpha;-D-glucopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H22N2O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 544.2989</p>
            <p>smiles: C[C@H]1O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H](C[C@@H]2O)n2cc(C)c(=O)[nH]c2=O)[C@H](O)[C@@H](O)C1=O</p>
            <p>inchikey: PSXWNITXWWECNY-UCBTUHGZSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DTDP__45__DEOH__45__DEOXY__45__GLUCOSE_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_DTDP__45__RHAMNOSE_c" id="M_DTDP__45__RHAMNOSE_c" name="dTDP-&amp;beta;-L-rhamnose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H24N2O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 546.3148</p>
            <p>smiles: C[C@@H]1O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H](C[C@@H]2O)n2cc(C)c(=O)[nH]c2=O)[C@H](O)[C@H](O)[C@H]1O</p>
            <p>inchikey: ZOSQFDVXNQFKBY-CGAXJHMRSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DTDP__45__RHAMNOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_CELLULOSE_c" id="M_CELLULOSE_c" name="cellulose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Chalcones_c" id="M_Chalcones_c" name="a chalcone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 208.2552</p>
            <p>smiles: [H]C(=C([H])c1ccccc1)C(=O)c1ccccc1</p>
            <p>inchikey: DQFBYFPFKXHELB-VAWYXSNFSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_Chalcones_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C15H12O/c16-15(14-9-5-2-6-10-14)12-11-13-7-3-1-4-8-13/h1-12H/b12-11+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_FLAVANONES_c" id="M_FLAVANONES_c" name="a flavanone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 224.2546</p>
            <p>smiles: O=C1CC(Oc2ccccc12)c1ccccc1</p>
            <p>inchikey: ZONYXWQDUYMKFB-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_FLAVANONES_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C15H12O2/c16-13-10-15(11-6-2-1-3-7-11)17-14-9-5-4-8-12(13)14/h1-9,15H,10H2"/>
                </rdf:Bag>
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        </annotation>
      </species>
      <species metaid="M_3__45__oxo__45__decanoyl__45__ACPs_c" id="M_3__45__oxo__45__decanoyl__45__ACPs_c" name="a 3-oxodecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H17O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCC(=O)CC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_3__45__oxo__45__dodecanoyl__45__ACPs_c" id="M_3__45__oxo__45__dodecanoyl__45__ACPs_c" name="a 3-oxododecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H21O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCC(=O)CC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Decanoyl__45__ACPs_c" id="M_Decanoyl__45__ACPs_c" name="a decanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H19OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Arachidoyl__45__ACPs_c" id="M_Arachidoyl__45__ACPs_c" name="an arachidoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_trans__45__delta2__45__arachidoyl__45__ACPs_c" id="M_trans__45__delta2__45__arachidoyl__45__ACPs_c" name="a (2E)-icos-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_CPD__45__17271_c" id="M_CPD__45__17271_c" name="1-stearoyl-2-palmitoyl-glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H72O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 596.9646</p>
            <p>smiles: [H][C@](CO)(COC(=O)CCCCCCCCCCCCCCCCC)OC(=O)CCCCCCCCCCCCCCC</p>
            <p>inchikey: VYQDALBEQRZDPL-DHUJRADRSA-N</p>
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        <annotation>
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        </annotation>
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      <species metaid="M_CPD__45__14392_c" id="M_CPD__45__14392_c" name="stearidonoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H58N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1021.903</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/CCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/CCCCC(*)=O</p>
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        </notes>
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1085.5478</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1049.956</p>
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        </notes>
        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/CCCCCCC(*)=O</p>
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      <species metaid="M_GAMMA__45__LINOLENOYL__45__COA_c" id="M_GAMMA__45__LINOLENOYL__45__COA_c" name="&amp;gamma;-linolenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C39H60N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1023.919</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1201.7491</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_cis__45__19__45__CP__45__37__45__Mex__45__38__45__Me__45__C59__45__ACPs_c" id="M_cis__45__19__45__CP__45__37__45__Mex__45__38__45__Me__45__C59__45__ACPs_c" name="a cis-methoxy-C59-meroacyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__17283_c" id="M_CPD__45__17283_c" name="a [glycerolipid]-di-homo-&amp;gamma;-linolenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H33OR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCC\C=C/C\C=C/C\C=C/CCCCCCC(*)=O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1142.179</p>
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            <p>mass: 1185.181</p>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Bromide_c" id="M_Bromide_c" name="an organobromine compound" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__12258_c" id="M_CPD__45__12258_c" name="UDP-N-acetyl-&amp;alpha;-D-muramoyl-L-alanyl-&amp;gamma;-D-glutamyl-L-lysyl-D-alanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C37H56N8O25P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1074.8289</p>
            <p>smiles: [H][C@](C)(O[C@@]1([H])[C@]([H])(O)[C@@]([H])(CO)O[C@]([H])(OP([O-])(=O)OP([O-])(=O)OC[C@@]2([H])O[C@@]([H])(n3ccc(O)nc3=O)[C@]([H])(O)[C@]2([H])O)[C@]1([H])N=C(C)[O-])C([O-])=[NH+][C@@]([H])(C)C([O-])=[NH+][C@]([H])(CCC([O-])=[NH+][C@@]([H])(CCCC[NH3+])C([O-])=[NH+][C@]([H])(C)C([O-])=O)C([O-])=O</p>
            <p>inchikey: FOEDSVRZGQIXSP-XSOIKTQOSA-J</p>
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      <species metaid="M_CPD__45__12303_c" id="M_CPD__45__12303_c" name="undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-&amp;gamma;-D-glutamyl-L-lysyl- D-alanine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C83H135N6O20P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1598.9374</p>
            <p>smiles: [H]\C(CC\C(C)=C(/[H])CC\C(C)=C(\[H])CC\C(C)=C(\[H])CC\C(C)=C(\[H])CC\C(C)=C(\[H])CC\C(C)=C(\[H])CC\C(C)=C(\[H])CC\C(C)=C(\[H])CC\C(C)=C(\[H])COP([O-])(=O)OP([O-])(=O)O[C@@]1([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O[C@]([H])(C)C([O-])=[NH+][C@@]([H])(C)C([O-])=[NH+][C@]([H])(CCC([O-])=[NH+][C@@]([H])(CCCC[NH3+])C([O-])=[NH+][C@]([H])(C)C([O-])=O)C([O-])=O)[C@@]1([H])[NH+]=C(C)[O-])=C(\C)CCC=C(C)C</p>
            <p>inchikey: KCROFJGXXSCHGA-YGMFIXCYSA-K</p>
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        </notes>
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      <species metaid="M_MPT__45__Synthases_c" id="M_MPT__45__Synthases_c" name="MPT-Synthases" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Polyisoprenyl__45__Diphosphates_c" id="M_Polyisoprenyl__45__Diphosphates_c" name="an isoprenoid diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_4__45__Hydroxy__45__3__45__polyprenylbenzoates_c" id="M_4__45__Hydroxy__45__3__45__polyprenylbenzoates_c" name="a 4-hydroxy-3-polyprenylbenzoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_L__45__DOPACHROME_c" id="M_L__45__DOPACHROME_c" name="L-dopachrome" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H6NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 192.1488</p>
            <p>smiles: [H][C@]1(CC2=CC(=O)C(=O)C=C2N1)C([O-])=O</p>
            <p>inchikey: VJNCICVKUHKIIV-LURJTMIESA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_L__45__DOPACHROME_c">
              <bqbiol:isVersionOf>
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      <species metaid="M_2__45__3__45__CARBOXY__45__3__45__METHYLAMMONIOPROPYL__45__L__45___c" id="M_2__45__3__45__CARBOXY__45__3__45__METHYLAMMONIOPROPYL__45__L__45___c" name="a 2-[(3S)-3-carboxy-3-(methylammonio)propyl]-L-histidine-[translation elongation factor 2]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_QUINOLINATE_c" id="M_QUINOLINATE_c" name="quinolinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H3NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 165.1041</p>
            <p>smiles: [O-]C(=O)c1cccnc1C([O-])=O</p>
            <p>inchikey: GJAWHXHKYYXBSV-UHFFFAOYSA-L</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_QUINOLINATE_c">
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                </rdf:Bag>
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        </annotation>
      </species>
      <species metaid="M_TYRAMINE_c" id="M_TYRAMINE_c" name="tyramine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C8H12NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 138.1864</p>
            <p>smiles: [NH3+]CCc1ccc(O)cc1</p>
            <p>inchikey: DZGWFCGJZKJUFP-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_TYRAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H11NO/c9-6-5-7-1-3-8(10)4-2-7/h1-4,10H,5-6,9H2/p+1"/>
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      <species metaid="M_HYDRPHENYLAC__45__CPD_c" id="M_HYDRPHENYLAC__45__CPD_c" name="(4-hydroxyphenyl)acetaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H8O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 136.1479</p>
            <p>smiles: [H]C(=O)Cc1ccc(O)cc1</p>
            <p>inchikey: IPRPPFIAVHPVJH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_HYDRPHENYLAC__45__CPD_c">
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      <species metaid="M_NICOTINAMIDE_RIBOSE_c" id="M_NICOTINAMIDE_RIBOSE_c" name="1-(&amp;beta;-D ribofuranosyl)nicotinamide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C11H15N2O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 255.2467</p>
            <p>smiles: NC(=O)c1ccc[n+](c1)[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O</p>
            <p>inchikey: JLEBZPBDRKPWTD-TURQNECASA-O</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_NICOTINAMIDE_RIBOSE_c">
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                </rdf:Bag>
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            </rdf:Description>
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      </species>
      <species metaid="M_Xenobiotic_c" id="M_Xenobiotic_c" name="a xenobiotic" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__280_c" id="M_CPD__45__280_c" name="glutarate semialdehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H7O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 115.1078</p>
            <p>smiles: [H]C(=O)CCCC([O-])=O</p>
            <p>inchikey: VBKPPDYGFUZOAJ-UHFFFAOYSA-M</p>
          </body>
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        <annotation>
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            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_Xenobiotic_e" id="M_Xenobiotic_e" name="a xenobiotic" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CA__43__2_c" id="M_CA__43__2_c" name="CA+2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Ca">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 40.077</p>
            <p>smiles: [Ca++]</p>
            <p>inchikey: BHPQYMZQTOCNFJ-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Ca/q+2"/>
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      <species metaid="M_L__45__GAMMA__45__GLUTAMYLCYSTEINE_c" id="M_L__45__GAMMA__45__GLUTAMYLCYSTEINE_c" name="&amp;gamma;-L-glutamyl-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H13N2O5S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 249.265</p>
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CS)C([O-])=O)C([O-])=O</p>
            <p>inchikey: RITKHVBHSGLULN-WHFBIAKZSA-M</p>
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      <species metaid="M_OH__45__MYRISTOYL_c" id="M_OH__45__MYRISTOYL_c" name="UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-&amp;alpha;-D-glucosamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C43H75N3O20P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1016.0123</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 790.6647</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_OROTIDINE__45__5__45__PHOSPHATE_c" id="M_OROTIDINE__45__5__45__PHOSPHATE_c" name="orotidine 5&apos;-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H10N2O11P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 365.1686</p>
            <p>smiles: O[C@H]1[C@@H](O)[C@@H](O[C@@H]1COP([O-])([O-])=O)n1c(cc(=O)[nH]c1=O)C([O-])=O</p>
            <p>inchikey: KYOBSHFOBAOFBF-XVFCMESISA-K</p>
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      <species metaid="M_DUTP_c" id="M_DUTP_c" name="dUTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H11N2O14P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 464.1121</p>
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        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 462.537</p>
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        </notes>
      </species>
      <species metaid="M_CPD__45__10806_c" id="M_CPD__45__10806_c" name="4-hydroxy-2-nonenal" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H16O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 156.2221</p>
            <p>smiles: [H]C(=CC=O)C(O)CCCCC</p>
            <p>inchikey: JVJFIQYAHPMBBX-FNORWQNLSA-N</p>
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        </notes>
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      <species metaid="M_Mercapturates_c" id="M_Mercapturates_c" name="a mercapturate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H7NO3SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H](CS[*])C([O-])=O</p>
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      <species metaid="M_S__45__Substituted__45__L__45__Cysteines_c" id="M_S__45__Substituted__45__L__45__Cysteines_c" name="an L-cysteine-S-conjugate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6NO2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+][C@@H](CS[*])C([O-])=O</p>
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      </species>
      <species metaid="M_Oxidized__45__adrenal__45__ferredoxins_c" id="M_Oxidized__45__adrenal__45__ferredoxins_c" name="an oxidized adrenodoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Reduced__45__adrenal__45__ferredoxins_c" id="M_Reduced__45__adrenal__45__ferredoxins_c" name="a reduced  adrenodoxin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__17332_c" id="M_CPD__45__17332_c" name="(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H66N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1118.03</p>
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        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1075.993</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1067.971</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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            <p>mass: 1069.987</p>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__17348_c" id="M_CPD__45__17348_c" name="CPD-17348" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C41H64N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1051.972</p>
            <p>smiles: CCCCC\C=C/C\C=C/CCCCCCC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: JLHULLPFTGLIGF-DBYUABGNSA-J</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__17348_c">
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              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__oxo__45__behenoyl__45__ACPs_c" id="M_3__45__oxo__45__behenoyl__45__ACPs_c" name="a 3-oxodocosanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_cis__45__cis__45__D19__45__31__45__C50__45__2__45__ACPs_c" id="M_cis__45__cis__45__D19__45__31__45__C50__45__2__45__ACPs_c" name="a cis,cis-delta19,31-C50:2-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__9965_c" id="M_CPD__45__9965_c" name="icosanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C41H70N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1058.02</p>
            <p>smiles: CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: JYLSVNBJLYCSSW-IBYUJNRCSA-J</p>
          </body>
        </notes>
        <annotation>
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                </rdf:Bag>
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            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Behenoyl__45__ACPs_c" id="M_Behenoyl__45__ACPs_c" name="a behenoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_trans__45__delta2__45__behenoyl__45__ACPs_c" id="M_trans__45__delta2__45__behenoyl__45__ACPs_c" name="a (2E)-docos-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Phosphorylase__45__a_c" id="M_Phosphorylase__45__a_c" name="a phosphorylase a" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Phosphorylase__45__b_c" id="M_Phosphorylase__45__b_c" name="a phosphorylase b" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Pyruvate__45__dehydrogenase__45__L__45__serine_c" id="M_Pyruvate__45__dehydrogenase__45__L__45__serine_c" name="a [pyruvate dehydrogenase E1 &amp;alpha; subunit]-L-serine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Pyruvate__45__Dehydrogenase__45__Phosphoserine_c" id="M_Pyruvate__45__Dehydrogenase__45__Phosphoserine_c" name="a [pyruvate dehydrogenase E1 &amp;alpha; subunit]-L-serine phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Elongation__45__factor__45__2__45__P_c" id="M_Elongation__45__factor__45__2__45__P_c" name="phosphorylated elongation-factor 2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Elongation__45__factor__45__2_c" id="M_Elongation__45__factor__45__2_c" name="elongation-factor 2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Beta__45__hydroxydecanoyl__45__ACPs_c" id="M_Beta__45__hydroxydecanoyl__45__ACPs_c" name="a (3R)-3-hydroxydecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H39N2O9PRS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Butanoyl__45__ACPs_c" id="M_Butanoyl__45__ACPs_c" name="a butanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Hexanoyl__45__ACPs_c" id="M_Hexanoyl__45__ACPs_c" name="a hexanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Hex__45__2__45__enoyl__45__ACPs_c" id="M_Hex__45__2__45__enoyl__45__ACPs_c" name="a (2E)-hex-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCC\C=C\C(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_3__45__carboxy__45__3__45__dimethylammonio__45__propyl__45__L__45__his_c" id="M_3__45__carboxy__45__3__45__dimethylammonio__45__propyl__45__L__45__his_c" name="a 2-[(3S)-3-carboxy-3-(dimethylammonio)propyl]-L-histidine-[translation elongation factor 2]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DIHYDROXYINDOLE_c" id="M_DIHYDROXYINDOLE_c" name="5,6-dihydroxyindole" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 149.1467</p>
            <p>smiles: Oc1cc2cc[nH]c2cc1O</p>
            <p>inchikey: SGNZYJXNUURYCH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_DIHYDROXYINDOLE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H7NO2/c10-7-3-5-1-2-9-6(5)4-8(7)11/h1-4,9-11H"/>
                </rdf:Bag>
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      <species metaid="M_NA__43___c" id="M_NA__43___c" name="Na+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="Na">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 22.98922</p>
            <p>smiles: [Na+]</p>
            <p>inchikey: FKNQFGJONOIPTF-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Na/q+1"/>
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              </bqbiol:isVersionOf>
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      <species metaid="M_K__43___c" id="M_K__43___c" name="K+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="K">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 39.0978</p>
            <p>smiles: [K+]</p>
            <p>inchikey: NPYPAHLBTDXSSS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_K__43___c">
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                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/K/q+1"/>
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        </annotation>
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      <species metaid="M_CPD__45__12366_c" id="M_CPD__45__12366_c" name="8-oxo-GTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O15P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 535.1503</p>
            <p>smiles: [H][C@]1(COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)O[C@@]([H])(n2c(O)nc3c([O-])nc(=[NH2+])[nH]c23)[C@]([H])(O)[C@]1([H])O</p>
            <p>inchikey: JCHLKIQZUXYLPW-UMMCILCDSA-J</p>
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        </notes>
        <annotation>
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      <species metaid="M_CPD0__45__1905_c" id="M_CPD0__45__1905_c" name="8-oxo-dGTP" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O14P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 519.1509</p>
            <p>smiles: Nc1nc2n([C@H]3C[C@H](O)[C@@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)O3)c(=O)[nH]c2c(=O)[nH]1</p>
            <p>inchikey: BUZOGVVQWCXXDP-VPENINKCSA-J</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD0__45__1905_c">
              <bqbiol:isVersionOf>
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      </species>
      <species metaid="M_Tubulin__45__Heterodimers_c" id="M_Tubulin__45__Heterodimers_c" name="an &amp;alpha;/&amp;beta; tubulin heterodimer" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ENOL__45__OXALOACETATE_c" id="M_ENOL__45__OXALOACETATE_c" name="enol-oxaloacetate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H2O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 130.0568</p>
            <p>smiles: O\C(=C/C([O-])=O)C([O-])=O</p>
            <p>inchikey: UWYVPFMHMJIBHE-UPHRSURJSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_ENOL__45__OXALOACETATE_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H4O5/c5-2(4(8)9)1-3(6)7/h1,5H,(H,6,7)(H,8,9)/p-2/b2-1-"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_L__45__GLUTAMATE__45__5__45__P_c" id="M_L__45__GLUTAMATE__45__5__45__P_c" name="&amp;gamma;-L-glutamyl 5-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H8NO7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 225.0944</p>
            <p>smiles: [NH3+][C@@H](CCC(=O)OP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: PJRXVIJAERNUIP-VKHMYHEASA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__GLUTAMATE__45__5__45__P_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ARG__45__tRNAs_c" id="M_ARG__45__tRNAs_c" name="a tRNAArg" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_UDP__45__N__45__ACETYLMURAMATE_c" id="M_UDP__45__N__45__ACETYLMURAMATE_c" name="UDP-N-acetyl-&amp;alpha;-D-muramate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C20H28N3O19P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 676.3942</p>
            <p>smiles: C[C@@H](O[C@H]1[C@H](O)[C@@H](CO)O[C@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2ccc(=O)[nH]c2=O)[C@@H]1NC(C)=O)C([O-])=O</p>
            <p>inchikey: NQBRVZNDBBMBLJ-MQTLHLSBSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_UDP__45__N__45__ACETYLMURAMATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
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      <species metaid="M_UDP__45__ACETYL__45__CARBOXYVINYL__45__GLUCOSAMINE_c" id="M_UDP__45__ACETYL__45__CARBOXYVINYL__45__GLUCOSAMINE_c" name="UDP-N-acetyl-&amp;alpha;-D-glucosamine-enolpyruvate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C20H26N3O19P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 674.3783</p>
            <p>smiles: CC(=O)N[C@H]1[C@@H](OP([O-])(=O)OP([O-])(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2ccc(=O)[nH]c2=O)O[C@H](CO)[C@@H](O)[C@@H]1OC(=C)C([O-])=O</p>
            <p>inchikey: BEGZZYPUNCJHKP-DBYWSUQTSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_UDP__45__ACETYL__45__CARBOXYVINYL__45__GLUCOSAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H29N3O19P2/c1-7(18(30)31)38-16-12(21-8(2)25)19(40-9(5-24)14(16)28)41-44(35,36)42-43(33,34)37-6-10-13(27)15(29)17(39-10)23-4-3-11(26)22-20(23)32/h3-4,9-10,12-17,19,24,27-29H,1,5-6H2,2H3,(H,21,25)(H,30,31)(H,33,34)(H,35,36)(H,22,26,32)/p-3/t9-,10-,12-,13-,14-,15-,16-,17-,19-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Protein__45__N__45__terminal__45__L__45__Arginine_c" id="M_Protein__45__N__45__terminal__45__L__45__Arginine_c" name="an N-terminal arginyl-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C6H15N4OR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: NC(=[NH2+])NCCC[C@H]([NH3+])C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_L__45__ARGININO__45__SUCCINATE_c" id="M_L__45__ARGININO__45__SUCCINATE_c" name="L-arginino-succinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H17N4O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 289.2657</p>
            <p>smiles: [H][C@]([NH3+])(CCCNC(=[NH2+])N[C@@]([H])(CC([O-])=O)C([O-])=O)C([O-])=O</p>
            <p>inchikey: KDZOASGQNOPSCU-WDSKDSINSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__ARGININO__45__SUCCINATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
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      <species metaid="M_L__45__CITRULLINE_c" id="M_L__45__CITRULLINE_c" name="L-citrulline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13N3O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 175.1857</p>
            <p>smiles: NC(=O)NCCC[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: RHGKLRLOHDJJDR-BYPYZUCNSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__CITRULLINE_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H13N3O3/c7-4(5(10)11)2-1-3-9-6(8)12/h4H,1-3,7H2,(H,10,11)(H3,8,9,12)/t4-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_2__45__PROTOCATECHUOYLPHLOROGLUCINOLCARBOXYLA_c" id="M_2__45__PROTOCATECHUOYLPHLOROGLUCINOLCARBOXYLA_c" name="2-protocatechuoylphloroglucinolcarboxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C14H9O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 305.217</p>
            <p>smiles: Oc1cc(O)c(C([O-])=O)c(OC(=O)c2ccc(O)c(O)c2)c1</p>
            <p>inchikey: GRXIELRCPYIEQI-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_2__45__PROTOCATECHUOYLPHLOROGLUCINOLCARBOXYLA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C14H10O8/c15-7-4-10(18)12(13(19)20)11(5-7)22-14(21)6-1-2-8(16)9(17)3-6/h1-5,15-18H,(H,19,20)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_QUEUINE_c" id="M_QUEUINE_c" name="queuine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C12H16N5O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 278.2866</p>
            <p>smiles: Nc1nc2[nH]cc(C[NH2+][C@H]3C=C[C@H](O)[C@@H]3O)c2c(=O)[nH]1</p>
            <p>inchikey: WYROLENTHWJFLR-ACLDMZEESA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_QUEUINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H15N5O3/c13-12-16-10-8(11(20)17-12)5(4-15-10)3-14-6-1-2-7(18)9(6)19/h1-2,4,6-7,9,14,18-19H,3H2,(H4,13,15,16,17,20)/p+1/t6-,7-,9+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_tRNAs__45__with__45__queuine_c" id="M_tRNAs__45__with__45__queuine_c" name="a queuosine34 in tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C17H22N5O13P2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: Nc1nc2n(cc(C[NH2+]C3C=C[C@H](O)[C@@H]3O)c2c(=O)[nH]1)[C@@H]1O[C@H](COP([O-])(=O)O*)[C@@H](OP([O-])(=O)O*)[C@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__17355_c" id="M_CPD__45__17355_c" name="a [glycerolipid]-(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C22H31OR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCC(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__17324_c" id="M_CPD__45__17324_c" name="(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C43H64N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1091.993</p>
            <p>smiles: CCCCC\C=C/C\C=C/C\C=C/C\C=C/CCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: VMAJWSSWCPBIJY-KPOVBLHLSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
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        </annotation>
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      <species metaid="M_CPD__45__17367_c" id="M_CPD__45__17367_c" name="(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C43H66N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1094.009</p>
            <p>smiles: CCCCC\C=C/C\C=C/C\C=C/C\C=C/CCC[C@@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: JHXLRLHTJYMVBK-DHDHVEHBSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD__45__17375_c" id="M_CPD__45__17375_c" name="1-[18-hydroxyoeoyl]-2-[18-hydroxy-linoleoyl]-sn-glycerol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H70O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 650.9689</p>
            <p>smiles: OCCCCCCCC\C=C/CCCCCCCC(=O)OC[C@H](CO)OC(=O)CCCCCCC\C=C/C\C=C/CCCCCO</p>
            <p>inchikey: RCALBBVHQNUWNO-OSFDYRCISA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      </species>
      <species metaid="M_CPD__45__17373_c" id="M_CPD__45__17373_c" name="1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C39H69O10P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 728.934</p>
            <p>smiles: OCCCCCCCC\C=C/CCCCCCCC(=O)OC[C@H](COP([O-])([O-])=O)OC(=O)CCCCCCC\C=C/C\C=C/CCCCCO</p>
            <p>inchikey: ZXBGEIHFXPHRJY-NKFDZXFUSA-L</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1120.046</p>
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        <notes>
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            <p>mass: 203.1279</p>
            <p>smiles: O[C@](CCC([O-])=O)(CC([O-])=O)C([O-])=O</p>
            <p>inchikey: XKJVEVRQMLKSMO-SSDOTTSWSA-K</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 396.4797</p>
            <p>smiles: CCCCCCCCCCCCCC[C@@H](O)[C@@H](O)[C@@H]([NH3+])COP([O-])([O-])=O</p>
            <p>inchikey: AYGOSKULTISFCW-KSZLIROESA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 256.4241</p>
            <p>smiles: [H]C(=O)C(O)CCCCCCCCCCCCCC</p>
            <p>inchikey: BKBDVQVDRVGXKT-UHFFFAOYSA-N</p>
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      <species metaid="M_Microtubules_c" id="M_Microtubules_c" name="a microtubule" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Kinesin__45__Microtubules__45__Complex_c" id="M_Kinesin__45__Microtubules__45__Complex_c" name="a kinesin-microtubules complex" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_S__45__CITRAMALATE_c" id="M_S__45__CITRAMALATE_c" name="(S)-citramalate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H6O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 146.0992</p>
            <p>smiles: C[C@](O)(CC([O-])=O)C([O-])=O</p>
            <p>inchikey: XFTRTWQBIOMVPK-YFKPBYRVSA-L</p>
          </body>
        </notes>
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                </rdf:Bag>
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      <species metaid="M_3__45__oxo__45__lignoceroyl__45__ACPs_c" id="M_3__45__oxo__45__lignoceroyl__45__ACPs_c" name="a 3-oxotetracosanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_R__45__3__45__hydroxylignoceroyl__45__ACPs_c" id="M_R__45__3__45__hydroxylignoceroyl__45__ACPs_c" name="a (3R)-3-hydroxytetracosanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_trans__45__delta2__45__lignoceroyl__45__ACPs_c" id="M_trans__45__delta2__45__lignoceroyl__45__ACPs_c" name="a trans-tetracos-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_cis__45__delta5__45__3__45__hydroxylignoceroyl__45__ACPs_c" id="M_cis__45__delta5__45__3__45__hydroxylignoceroyl__45__ACPs_c" name="a (3R,5Z)-3-hydroxytetracos-5-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_cis__45__delta5__45__3__45__oxo__45__lignoceroyl__45__ACPs_c" id="M_cis__45__delta5__45__3__45__oxo__45__lignoceroyl__45__ACPs_c" name="a (5Z)-3-oxotetracos-5-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Protein__45__L__45__Ser__45__or__45__L__45__Thr__45__L__45__Pro_c" id="M_Protein__45__L__45__Ser__45__or__45__L__45__Thr__45__L__45__Pro_c" name="a protein containing an (L-serine/L-threonine)-L-proline motif" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Protein__45__L__45__Ser__45__or__45__L__45__Thr__45__P__45__L__45__Pro_c" id="M_Protein__45__L__45__Ser__45__or__45__L__45__Thr__45__P__45__L__45__Pro_c" name="a protein containing a phosphorylated (L-serine/L-threonine)-L-proline motif" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_MAPKK__45__L__45__serine__45__or__45__L__45__threonine_c" id="M_MAPKK__45__L__45__serine__45__or__45__L__45__threonine_c" name="a [MAP kinase kinase]-(L-serine/L-threonine)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H5NO2R3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC([*])[C@H]([NH2+]*)C(*)=O</p>
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        </notes>
      </species>
      <species metaid="M_MAPKK__45__Ser__45__or__45__Thr__45__phosphate_c" id="M_MAPKK__45__Ser__45__or__45__Thr__45__phosphate_c" name="a [MAP kinase kinase] (L-serine/L-threonine) phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H4NO5PR3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]P([O-])(=O)OC([*])[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_GLT__45__tRNAs_c" id="M_GLT__45__tRNAs_c" name="a tRNAglu" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Charged__45__GLT__45__tRNAs_c" id="M_Charged__45__GLT__45__tRNAs_c" name="an L-glutamyl-[tRNAGlu]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_Receptor__45__protein__45__Ser__45__or__45__Thr_c" id="M_Receptor__45__protein__45__Ser__45__or__45__Thr_c" name="a [receptor protein] Ser/Thr" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Receptor__45__Protein__45__Ser__45__or__45__Thr__45__phosphate_c" id="M_Receptor__45__Protein__45__Ser__45__or__45__Thr__45__phosphate_c" name="a [receptor protein] (L-serine/L-threonine) phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Malonyl__45__acp__45__methyl__45__ester_c" id="M_Malonyl__45__acp__45__methyl__45__ester_c" name="a malonyl-[acp] methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_3__45__Ketoglutaryl__45__ACP__45__methyl__45__ester_c" id="M_3__45__Ketoglutaryl__45__ACP__45__methyl__45__ester_c" name="a 3-oxoglutaryl-[acp] methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_3__45__Hydroxyglutaryl__45__ACP__45__methyl__45__ester_c" id="M_3__45__Hydroxyglutaryl__45__ACP__45__methyl__45__ester_c" name="a (3R)-3-hydroxyglutaryl-[acp] methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Enoylglutaryl__45__ACP__45__methyl__45__esters_c" id="M_Enoylglutaryl__45__ACP__45__methyl__45__esters_c" name="an enoylglutaryl-[acp] methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Glutaryl__45__ACP__45__methyl__45__esters_c" id="M_Glutaryl__45__ACP__45__methyl__45__esters_c" name="a glutaryl-[acp] methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_3__45__Ketopimeloyl__45__ACP__45__methyl__45__esters_c" id="M_3__45__Ketopimeloyl__45__ACP__45__methyl__45__esters_c" name="a 3-oxopimeloyl-[acp] methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__17383_c" id="M_CPD__45__17383_c" name="(2E,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H66N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1102.031</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCCC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: MMZJVINJFSRJOK-CYNJBPNESA-J</p>
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        </notes>
        <annotation>
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      <species metaid="M_CPD__45__17331_c" id="M_CPD__45__17331_c" name="(9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H68N7O17P3S">
        <notes>
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            <p>mass: 1104.047</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: BNAMTMVBOVNNSH-AFQBPCMKSA-J</p>
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        </annotation>
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      <species metaid="M_CPD__45__17385_c" id="M_CPD__45__17385_c" name="(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H66N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1102.031</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: KRIFZIRXAAITHR-KWFBMMABSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD__45__17386_c" id="M_CPD__45__17386_c" name="(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H64N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1100.015</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC\C=C\C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: NVOWZIBKQIWTDG-ADUCOSNASA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD__45__17387_c" id="M_CPD__45__17387_c" name="(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C45H66N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1118.03</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: JJCGUWRDULVWQG-DRXNPIJBSA-J</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        </annotation>
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      <species metaid="M_CPD__45__650_c" id="M_CPD__45__650_c" name="(3R)-3-hydroxybutanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C25H38N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 849.594</p>
            <p>smiles: C[C@@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: QHHKKMYHDBRONY-WZZMXTMRSA-J</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD__45__5661_c" id="M_CPD__45__5661_c" name="zeinoxanthin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 552.872</p>
            <p>smiles: C\C(\C=C\C=C(/C)\C=C\[C@H]1C(C)=CCCC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1=C(C)C[C@@H](O)CC1(C)C</p>
            <p>inchikey: NBZANZVJRKXVBH-NHWXEJKLSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD1F__45__119_c" id="M_CPD1F__45__119_c" name="lutein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 568.8714</p>
            <p>smiles: C\C(\C=C\C=C(/C)\C=C\[C@H]1C(C)=C[C@H](O)CC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1=C(C)C[C@@H](O)CC1(C)C</p>
            <p>inchikey: KBPHJBAIARWVSC-RGZFRNHPSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C40H56O2/c1-29(17-13-19-31(3)21-23-37-33(5)25-35(41)27-39(37,7)8)15-11-12-16-30(2)18-14-20-32(4)22-24-38-34(6)26-36(42)28-40(38,9)10/h11-25,35-37,41-42H,26-28H2,1-10H3/b12-11+,17-13+,18-14+,23-21+,24-22+,29-15+,30-16+,31-19+,32-20+/t35-,36+,37-/m0/s1"/>
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      <species metaid="M_CPD__45__590_c" id="M_CPD__45__590_c" name="(2R,3S,4S)-leucocyanidin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H14O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 306.2675</p>
            <p>smiles: O[C@H]1[C@@H](O)c2c(O)cc(O)cc2O[C@@H]1c1ccc(O)c(O)c1</p>
            <p>inchikey: SBZWTSHAFILOTE-SOUVJXGZSA-N</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_10__45__FORMYL__45__DIHYDROFOLATE__45__GLU__45__N_c" id="M_10__45__FORMYL__45__DIHYDROFOLATE__45__GLU__45__N_c" name="an N10-formyldihydrofolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H19N7O6R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: Nc1nc2NCC(CN(C=O)c3ccc(cc3)C(=O)N[C@@H](CCC([*])=O)C([O-])=O)=Nc2c(=O)[nH]1</p>
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        </notes>
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      <species metaid="M_CPD__45__14931_c" id="M_CPD__45__14931_c" name="a 10-formyltetrahydrofolate-4a-carbinolamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H21N7O7R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: NC1=NC(=O)C2(O)NC(CN(C=O)c3ccc(cc3)C(=O)N[C@@H](CCC([*])=O)C([O-])=O)CNC2=N1</p>
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      <species metaid="M_GLYCOL_c" id="M_GLYCOL_c" name="ethylene glycol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H6O2">
        <notes>
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            <p>mass: 62.0678</p>
            <p>smiles: OCCO</p>
            <p>inchikey: LYCAIKOWRPUZTN-UHFFFAOYSA-N</p>
          </body>
        </notes>
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          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GLYCOL_c">
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2"/>
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      <species metaid="M_cis__45__delta17__45__3__45__hydroxyC36__45__ACPs_c" id="M_cis__45__delta17__45__3__45__hydroxyC36__45__ACPs_c" name="a cis-delta17-3-hydroxyC36:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_cis__45__delta17__45__3__45__oxo__45__C36__45__ACPs_c" id="M_cis__45__delta17__45__3__45__oxo__45__C36__45__ACPs_c" name="a cis-delta17-3-oxo-C36:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__787_c" id="M_CPD__45__787_c" name="(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H6O5">
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            <p>mass: 170.1206</p>
            <p>smiles: O\C(=C/C=C\CC([O-])=O)C([O-])=O</p>
            <p>inchikey: ZBCBETMBSDTINL-NWJCXACMSA-L</p>
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      <species metaid="M_CPD__45__786_c" id="M_CPD__45__786_c" name="(4Z)-2-oxohept-4-enedioate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H6O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 170.1206</p>
            <p>smiles: [O-]C(=O)CC\C=C/C(=O)C([O-])=O</p>
            <p>inchikey: HYVSZVZMTYIHKF-IWQZZHSRSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__786_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H8O5/c8-5(7(11)12)3-1-2-4-6(9)10/h1,3H,2,4H2,(H,9,10)(H,11,12)/p-2/b3-1-"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD3DJ__45__11366_c" id="M_CPD3DJ__45__11366_c" name="sphingosine 1-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H37NO5P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 378.4644</p>
            <p>smiles: CCCCCCCCCCCCC\C=C\[C@@H](O)[C@@H]([NH3+])COP([O-])([O-])=O</p>
            <p>inchikey: DUYSYHSSBDVJSM-KRWOKUGFSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD3DJ__45__11366_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C18H38NO5P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(20)17(19)16-24-25(21,22)23/h14-15,17-18,20H,2-13,16,19H2,1H3,(H2,21,22,23)/p-1/b15-14+/t17-,18+/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Oleoyl__45__lipid_c" id="M_Oleoyl__45__lipid_c" name="a [glycerolipid]-oleate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33OR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCC\C=C/CCCCCCCC(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_5__45__HYDROXY__45__TRYPTOPHAN_c" id="M_5__45__HYDROXY__45__TRYPTOPHAN_c" name="5-hydroxy-L-tryptophan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 220.2246</p>
            <p>smiles: [NH3+][C@@H](Cc1c[nH]c2ccc(O)cc12)C([O-])=O</p>
            <p>inchikey: LDCYZAJDBXYCGN-VIFPVBQESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__HYDROXY__45__TRYPTOPHAN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C11H12N2O3/c12-9(11(15)16)3-6-5-13-10-2-1-7(14)4-8(6)10/h1-2,4-5,9,13-14H,3,12H2,(H,15,16)/t9-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_FECOSTEROL_c" id="M_FECOSTEROL_c" name="fecosterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H46O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 398.6642</p>
            <p>smiles: [H][C@@]1(CC[C@@]2([H])C3=C(CC[C@]12C)[C@@]1(C)CC[C@H](O)C[C@]1([H])CC3)[C@H](C)CCC(=C)C(C)C</p>
            <p>inchikey: SLQKYSPHBZMASJ-QKPORZECSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_FECOSTEROL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C28H46O/c1-18(2)19(3)7-8-20(4)24-11-12-25-23-10-9-21-17-22(29)13-15-27(21,5)26(23)14-16-28(24,25)6/h18,20-22,24-25,29H,3,7-17H2,1-2,4-6H3/t20-,21+,22+,24-,25+,27+,28-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__oxo__45__stearoyl__45__ACPs_c" id="M_3__45__oxo__45__stearoyl__45__ACPs_c" name="a 3-oxooctadecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCCCCC(=O)CC(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_5__45__HYDROXYISOURATE_c" id="M_5__45__HYDROXYISOURATE_c" name="(S)-5-hydroxyisourate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 184.1097</p>
            <p>smiles: OC12NC(=O)NC1=NC(=O)NC2=O</p>
            <p>inchikey: LTQYPAVLAYVKTK-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__HYDROXYISOURATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H4N4O4/c10-2-5(13)1(6-3(11)8-2)7-4(12)9-5/h13H,(H3,6,7,8,9,10,11,12)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Protein__45__Phosphoserines_c" id="M_Protein__45__Phosphoserines_c" name="a [protein] L-serine phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Mitogen__45__Activated__45__Protein__45__Kinase__45__L__45__Thr_c" id="M_Mitogen__45__Activated__45__Protein__45__Kinase__45__L__45__Thr_c" name="a [mitogen-activated protein kinase]-L-threonine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C4H8NO2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[C@@H](O)[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_MAP__45__Kinase__45__L__45__Phosphothreonine_c" id="M_MAP__45__Kinase__45__L__45__Phosphothreonine_c" name="a [mitogen-activated protein kinase] L-threonine phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H7NO5PR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: C[C@@H](OP([O-])([O-])=O)[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Aryl__45__sulfates_c" id="M_Aryl__45__sulfates_c" name="an aryl sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__16618_c" id="M_CPD__45__16618_c" name="CPD-16618" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H5O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 117.0806</p>
            <p>smiles: [H]C(=O)[C@H](O)CC([O-])=O</p>
            <p>inchikey: QWHDXIUUXWGQME-GSVOUGTGSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__16618_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H6O4/c5-2-3(6)1-4(7)8/h2-3,6H,1H2,(H,7,8)/p-1/t3-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__hydroxypimeloyl__45__ACP__45__methyl__45__esters_c" id="M_3__45__hydroxypimeloyl__45__ACP__45__methyl__45__esters_c" name="a (3R)-3-hydroxypimeloyl-[acp] methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Enoylpimeloyl__45__ACP__45__methyl__45__esters_c" id="M_Enoylpimeloyl__45__ACP__45__methyl__45__esters_c" name="an enoylpimeloyl-[acp] methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Pimeloyl__45__ACP__45__methyl__45__esters_c" id="M_Pimeloyl__45__ACP__45__methyl__45__esters_c" name="a pimeloyl-[acp] methyl ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13O3RS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__19726_c" id="M_CPD__45__19726_c" name="(4S)-2,3-dehydro-leucocyanidin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_DIACETYL_c" id="M_DIACETYL_c" name="diacetyl" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 86.0892</p>
            <p>smiles: CC(=O)C(C)=O</p>
            <p>inchikey: QSJXEFYPDANLFS-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIACETYL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H6O2/c1-3(5)4(2)6/h1-2H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__5821_c" id="M_CPD__45__5821_c" name="(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H5N4O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 201.1175</p>
            <p>smiles: NC(=O)NC1=NC(=O)NC1(O)C([O-])=O</p>
            <p>inchikey: WHKYNCPIXMNTRQ-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__5821_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD1F__45__139_c" id="M_CPD1F__45__139_c" name="gibberellin A1" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H23O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 347.3829</p>
            <p>smiles: [H][C@@]12CC[C@]3(O)C[C@]1(CC3=C)[C@@H](C([O-])=O)[C@]1([H])[C@@]3(C)[C@@H](O)CC[C@@]21OC3=O</p>
            <p>inchikey: JLJLRLWOEMWYQK-OBDJNFEBSA-M</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD1F__45__139_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__204_c" id="M_CPD__45__204_c" name="gibberellin A8" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H23O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 363.3823</p>
            <p>smiles: [H][C@@]12CC[C@]3(O)C[C@]1(CC3=C)[C@@H](C([O-])=O)[C@]1([H])[C@@]3(C)[C@@H](O)[C@@H](O)C[C@@]21OC3=O</p>
            <p>inchikey: WZRRJZYYGOOHRC-UQJCXHNCSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__204_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BETAINE__45__ALDEHYDE__45__HYDRATE_c" id="M_BETAINE__45__ALDEHYDE__45__HYDRATE_c" name="betaine aldehyde hydrate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H14NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 120.1696</p>
            <p>smiles: C[N+](C)(C)CC(O)O</p>
            <p>inchikey: HEHORKLRCFPRON-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_BETAINE__45__ALDEHYDE__45__HYDRATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H14NO2/c1-6(2,3)4-5(7)8/h5,7-8H,4H2,1-3H3/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__20905_c" id="M_CPD__45__20905_c" name="cob(I)alamin-[corrinoid adenosyltranferase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_B12__45__Corrinoid__45__Adenosyltranferase_c" id="M_B12__45__Corrinoid__45__Adenosyltranferase_c" name="adenosylcob(III)alamin-[corrinoid adenosyltranferase]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C([*])=O</p>
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        </notes>
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      <species metaid="M_5Z8Z11Z14Z17Z__45__EICOSAPENTAENOATE_c" id="M_5Z8Z11Z14Z17Z__45__EICOSAPENTAENOATE_c" name="(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H29O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 301.4436</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCC([O-])=O</p>
            <p>inchikey: JAZBEHYOTPTENJ-JLNKQSITSA-M</p>
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      <species metaid="M_R__45__4__45__PHOSPHOPANTOTHENOYL__45__L__45__CYSTEINE_c" id="M_R__45__4__45__PHOSPHOPANTOTHENOYL__45__L__45__CYSTEINE_c" name="(R)-4&apos;-phosphopantothenoyl-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C12H20N2O9PS">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 399.336</p>
            <p>smiles: CC(C)(COP([O-])([O-])=O)[C@@H](O)C(=O)NCCC(=O)N[C@@H](CS)C([O-])=O</p>
            <p>inchikey: XQYALQVLCNHCFT-CBAPKCEASA-K</p>
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      <species metaid="M_CPD__45__8117_c" id="M_CPD__45__8117_c" name="&amp;gamma;-linolenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H29O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 277.4222</p>
            <p>smiles: CCCCC\C=C/C\C=C/C\C=C/CCCCC([O-])=O</p>
            <p>inchikey: VZCCETWTMQHEPK-QNEBEIHSSA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1041.934</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC\C=C/CC[C@@H](O)C\C=C/CCCCCCCC(*)=O</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1073.978</p>
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      <species metaid="M_CPD__45__9768_c" id="M_CPD__45__9768_c" name="(2E)-hexadecenoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C16H29O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 253.4008</p>
            <p>smiles: CCCCCCCCCCCCC\C=C\C([O-])=O</p>
            <p>inchikey: ZVRMGCSSSYZGSM-CCEZHUSRSA-M</p>
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        </notes>
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      <species metaid="M_COUMARATE_c" id="M_COUMARATE_c" name="4-coumarate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H7O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 163.1506</p>
            <p>smiles: Oc1ccc(\C=C\C([O-])=O)cc1</p>
            <p>inchikey: NGSWKAQJJWESNS-ZZXKWVIFSA-M</p>
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      <species metaid="M_P__45__COUMAROYL__45__COA_c" id="M_P__45__COUMAROYL__45__COA_c" name="(E)-4-coumaroyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C30H38N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 909.647</p>
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      <species metaid="M_INDOLEYL__45__CPD_c" id="M_INDOLEYL__45__CPD_c" name="(indole-3-yl)acetonitrile" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H8N2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 156.1839</p>
            <p>smiles: N#CCc1c[nH]c2ccccc12</p>
            <p>inchikey: DMCPFOBLJMLSNX-UHFFFAOYSA-N</p>
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      <species metaid="M_EPISTEROL_c" id="M_EPISTEROL_c" name="episterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H46O">
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            <p>mass: 398.6642</p>
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      <species metaid="M_PHYTOSPINGOSINE_c" id="M_PHYTOSPINGOSINE_c" name="phytosphingosine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C18H40NO3">
        <notes>
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            <p>mass: 318.5146</p>
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            <p>inchikey: AERBNCYCJBRYDG-KSZLIROESA-O</p>
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      <species metaid="M_Phytoceramides_c" id="M_Phytoceramides_c" name="a phytoceramide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H38NO4R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCCCCCCC[C@@H](O)[C@@H](O)[C@H](CO)NC([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__313_c" id="M_CPD__45__313_c" name="propane-1,3-diamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C3H12N2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 76.1397</p>
            <p>smiles: [NH3+]CCC[NH3+]</p>
            <p>inchikey: XFNJVJPLKCPIBV-UHFFFAOYSA-P</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__313_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H10N2/c4-2-1-3-5/h1-5H2/p+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_UROPORPHYRINOGEN__45__III_c" id="M_UROPORPHYRINOGEN__45__III_c" name="uroporphyrinogen-III" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-8" fbc:chemicalFormula="C40H36N4O16">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 828.7354</p>
            <p>smiles: [O-]C(=O)CCc1c2Cc3[nH]c(Cc4[nH]c(Cc5[nH]c(Cc([nH]2)c1CC([O-])=O)c(CCC([O-])=O)c5CC([O-])=O)c(CCC([O-])=O)c4CC([O-])=O)c(CC([O-])=O)c3CCC([O-])=O</p>
            <p>inchikey: HUHWZXWWOFSFKF-UHFFFAOYSA-F</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_UROPORPHYRINOGEN__45__III_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C40H44N4O16/c45-33(46)5-1-17-21(9-37(53)54)29-14-27-19(3-7-35(49)50)22(10-38(55)56)30(43-27)15-28-20(4-8-36(51)52)24(12-40(59)60)32(44-28)16-31-23(11-39(57)58)18(2-6-34(47)48)26(42-31)13-25(17)41-29/h41-44H,1-16H2,(H,45,46)(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)/p-8"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__HYDROXY__45__PROPIONYL__45__COA_c" id="M_3__45__HYDROXY__45__PROPIONYL__45__COA_c" name="3-hydroxypropanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C24H36N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 835.567</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CCO</p>
            <p>inchikey: BERBFZCUSMQABM-IEXPHMLFSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__HYDROXY__45__PROPIONYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ACRYLYL__45__COA_c" id="M_ACRYLYL__45__COA_c" name="acryloyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C24H34N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 817.552</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C=C</p>
            <p>inchikey: POODSGUMUCVRTR-IEXPHMLFSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ACRYLYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__7630_c" id="M_CPD__45__7630_c" name="(-)-epicatechin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H14O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 290.2681</p>
            <p>smiles: [H][C@@]1(Oc2cc(O)cc(O)c2C[C@H]1O)c1ccc(O)c(O)c1</p>
            <p>inchikey: PFTAWBLQPZVEMU-UKRRQHHQSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__7630_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__591_c" id="M_CPD__45__591_c" name="cyanidin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H9O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 285.2289</p>
            <p>smiles: Oc1cc([O-])c2cc([O-])c([o+]c2c1)-c1ccc(O)c(O)c1</p>
            <p>inchikey: VEVZSMAEJFVWIL-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__591_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__6124_c" id="M_CPD__45__6124_c" name="1-pyrroline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C4H8N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 70.1125</p>
            <p>smiles: C1CC=[NH+]C1</p>
            <p>inchikey: ZVJHJDDKYZXRJI-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__6124_c">
              <bqbiol:isVersionOf>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H7N/c1-2-4-5-3-1/h3H,1-2,4H2/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_MALEATE_c" id="M_MALEATE_c" name="maleate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H2O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 114.0574</p>
            <p>smiles: [O-]C(=O)\C=C/C([O-])=O</p>
            <p>inchikey: VZCYOOQTPOCHFL-UPHRSURJSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MALEATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H4O4/c5-3(6)1-2-4(7)8/h1-2H,(H,5,6)(H,7,8)/p-2/b2-1-"/>
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      </species>
      <species metaid="M_CPD__45__14601_c" id="M_CPD__45__14601_c" name="mycophenolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C17H19O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 319.3297</p>
            <p>smiles: COc1c(C)c2COC(=O)c2c(O)c1C\C=C(/C)CCC([O-])=O</p>
            <p>inchikey: HPNSFSBZBAHARI-RUDMXATFSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
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      </species>
      <species metaid="M_3__45__7__45__DIMETHYLXANTHINE_c" id="M_3__45__7__45__DIMETHYLXANTHINE_c" name="theobromine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8N4O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.164</p>
            <p>smiles: Cn1cnc2n(C)c(=O)[nH]c(=O)c12</p>
            <p>inchikey: YAPQBXQYLJRXSA-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__7__45__DIMETHYLXANTHINE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_CPD__45__12482_c" id="M_CPD__45__12482_c" name="3,7-dimethylurate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8N4O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 196.1634</p>
            <p>smiles: Cn1c2c([nH]c1=O)n(C)c(=O)[nH]c2=O</p>
            <p>inchikey: HMLZLHKHNBLLJD-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__12482_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DIHYDROXYACETONE_c" id="M_DIHYDROXYACETONE_c" name="dihydroxyacetone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 90.0779</p>
            <p>smiles: OCC(=O)CO</p>
            <p>inchikey: RXKJFZQQPQGTFL-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIHYDROXYACETONE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H6O3/c4-1-3(6)2-5/h4-5H,1-2H2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_1__45__7__45__DIMETHYLXANTHINE_c" id="M_1__45__7__45__DIMETHYLXANTHINE_c" name="paraxanthine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8N4O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.164</p>
            <p>smiles: Cn1cnc2[nH]c(=O)n(C)c(=O)c12</p>
            <p>inchikey: QUNWUDVFRNGTCO-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_1__45__7__45__DIMETHYLXANTHINE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
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      <species metaid="M_7__45__METHYLXANTHINE_c" id="M_7__45__METHYLXANTHINE_c" name="7-methylxanthine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H6N4O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 166.1374</p>
            <p>smiles: Cn1cnc2[nH]c(=O)[nH]c(=O)c12</p>
            <p>inchikey: PFWLFWPASULGAN-UHFFFAOYSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_23S__45__RRNA__45__N2__45__METHYLGUANINE2445_c" id="M_23S__45__RRNA__45__N2__45__METHYLGUANINE2445_c" name="an N2-methylguanine2445 in 23S rRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_GLY__45__tRNAs_c" id="M_GLY__45__tRNAs_c" name="a tRNAGly" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 339.5762</p>
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            <p>inchikey: UKMSUNONTOPOIO-UHFFFAOYSA-M</p>
          </body>
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      <species metaid="M_Eicosadienoates_c" id="M_Eicosadienoates_c" name="an icosadienoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1043.95</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCC[C@@H](O)C\C=C/CCCCCCCC(*)=O</p>
          </body>
        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1072.003</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__17400_c" id="M_CPD__45__17400_c" name="a [glycerolipid]-lesquerolate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H37O2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCC[C@@H](O)C\C=C/CCCCCCCCCC(*)=O</p>
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        </notes>
      </species>
      <species metaid="M_CPD__45__17401_c" id="M_CPD__45__17401_c" name="3-oxo-auricoloyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C41H64N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1083.971</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1085.987</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1069.987</p>
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 726.9191</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC\C=C/CC[C@@H](O)C\C=C/CCCCCCCCCC(*)=O</p>
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      </species>
      <species metaid="M_CPD__45__11938_c" id="M_CPD__45__11938_c" name="1D-myo-inositol 1,5-bis(diphosphate) 2,3,4,6-tetrakisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-13" fbc:chemicalFormula="C6H7O30P8">
        <notes>
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            <p>mass: 806.899</p>
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            <p>inchikey: HHQOOERQSFJGEP-SLWYWOEDSA-A</p>
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                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H20O30P8/c7-37(8,9)29-1-2(30-38(10,11)12)5(33-43(25,26)35-41(19,20)21)4(32-40(16,17)18)6(3(1)31-39(13,14)15)34-44(27,28)36-42(22,23)24/h1-6H,(H,25,26)(H,27,28)(H2,7,8,9)(H2,10,11,12)(H2,13,14,15)(H2,16,17,18)(H2,19,20,21)(H2,22,23,24)/p-13/t1-,2-,3-,4-,5+,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__15363_c" id="M_CPD__45__15363_c" name="(11Z)-icosenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C41H68N7O17P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1056.004</p>
            <p>smiles: CCCCCCCC\C=C/CCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: ZDRKXADSROCWCG-FVLDFCIYSA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__15363_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C41H72N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-32(50)69-25-24-43-31(49)22-23-44-39(53)36(52)41(2,3)27-62-68(59,60)65-67(57,58)61-26-30-35(64-66(54,55)56)34(51)40(63-30)48-29-47-33-37(42)45-28-46-38(33)48/h11-12,28-30,34-36,40,51-52H,4-10,13-27H2,1-3H3,(H,43,49)(H,44,53)(H,57,58)(H,59,60)(H2,42,45,46)(H2,54,55,56)/p-4/b12-11-/t30-,34-,35-,36+,40-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__17404_c" id="M_CPD__45__17404_c" name="a [glycerolipid]-(11Z)-eicosenoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H37OR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCC\C=C/CCCCCCCCCC(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Initiation__45__tRNAmet_c" id="M_Initiation__45__tRNAmet_c" name="initiator tRNAMet" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5__45__Methylcytosine__45__DNA_c" id="M_5__45__Methylcytosine__45__DNA_c" name="a 5-methylcytosine in DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DNA__45__Cytosines_c" id="M_DNA__45__Cytosines_c" name="a cytosine in DNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Ubiquitin__45__activating__45__protein__45__E1__45__L__45__cys_c" id="M_Ubiquitin__45__activating__45__protein__45__E1__45__L__45__cys_c" name="an [E1 ubiquitin-activating enzyme]-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H6NOSR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: SC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_GLUCONATE_c" id="M_GLUCONATE_c" name="D-gluconate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H11O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 195.1479</p>
            <p>smiles: OC[C@@H](O)[C@@H](O)[C@H](O)[C@@H](O)C([O-])=O</p>
            <p>inchikey: RGHNJXZEOKUKBD-SQOUGZDYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_GLUCONATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-5,7-11H,1H2,(H,12,13)/p-1/t2-,3-,4+,5-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__DEHYDROGLUCONATE_c" id="M_5__45__DEHYDROGLUCONATE_c" name="5-dehydro-D-gluconate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H9O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 193.132</p>
            <p>smiles: OCC(=O)[C@@H](O)[C@H](O)[C@@H](O)C([O-])=O</p>
            <p>inchikey: IZSRJDGCGRAUAR-MROZADKFSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__DEHYDROGLUCONATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H10O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h3-5,7,9-11H,1H2,(H,12,13)/p-1/t3-,4+,5-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Secondary__45__Alcohols_c" id="M_Secondary__45__Alcohols_c" name="a secondary alcohol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CH2OR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC([*])[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_LONG__45__CHAIN__45__KETONE_c" id="M_LONG__45__CHAIN__45__KETONE_c" name="a ketone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="COR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__16817_c" id="M_CPD__45__16817_c" name="indoxyl sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C8H6NO4S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 212.203</p>
            <p>smiles: [O-]S(=O)(=O)Oc1c[nH]c2ccccc12</p>
            <p>inchikey: BXFFHSIDQOFMLE-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__16817_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H7NO4S/c10-14(11,12)13-8-5-9-7-4-2-1-3-6(7)8/h1-5,9H,(H,10,11,12)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_TRANS__45__3__45__METHYL__45__GLUTACONYL__45__COA_c" id="M_TRANS__45__3__45__METHYL__45__GLUTACONYL__45__COA_c" name="3-methylglutaconyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C27H37N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 888.607</p>
            <p>smiles: [H]\C(=C(\C)CC([O-])=O)C(=O)SCC[NH+]=C([O-])CC[NH+]=C([O-])[C@]([H])(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@@]1([H])O[C@@]([H])(n2cnc3c(N)ncnc23)[C@]([H])(O)[C@]1([H])OP([O-])([O-])=O</p>
            <p>inchikey: GXKSHRDAHFLWPN-RKYLSHMCSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_TRANS__45__3__45__METHYL__45__GLUTACONYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C27H42N7O19P3S/c1-14(8-17(36)37)9-18(38)57-7-6-29-16(35)4-5-30-25(41)22(40)27(2,3)11-50-56(47,48)53-55(45,46)49-10-15-21(52-54(42,43)44)20(39)26(51-15)34-13-33-19-23(28)31-12-32-24(19)34/h9,12-13,15,20-22,26,39-40H,4-8,10-11H2,1-3H3,(H,29,35)(H,30,41)(H,36,37)(H,45,46)(H,47,48)(H2,28,31,32)(H2,42,43,44)/p-5/b14-9+/t15-,20-,21-,22+,26-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_ANTHRANILATE_c" id="M_ANTHRANILATE_c" name="anthranilate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H6NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 136.1286</p>
            <p>smiles: Nc1ccccc1C([O-])=O</p>
            <p>inchikey: RWZYAGGXGHYGMB-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_ANTHRANILATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H7NO2/c8-6-4-2-1-3-5(6)7(9)10/h1-4H,8H2,(H,9,10)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_VibB_c" id="M_VibB_c" name="an apo-[VibB aryl-carrier protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Phosphoserines_c" id="M_Phosphoserines_c" name="L(or D)-O-phosphoserine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H6NO6P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 183.0577</p>
            <p>smiles: [NH3+]C(COP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: BZQFBWGGLXLEPQ-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_Phosphoserines_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H8NO6P/c4-2(3(5)6)1-10-11(7,8)9/h2H,1,4H2,(H,5,6)(H2,7,8,9)/p-2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_holo__45__VibB_c" id="M_holo__45__VibB_c" name="a holo-[VibB aryl-carrier protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_COUMARALDEHYDE_c" id="M_COUMARALDEHYDE_c" name="4-coumaraldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H8O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 148.1586</p>
            <p>smiles: [H]C(=O)\C=C\c1ccc(O)cc1</p>
            <p>inchikey: CJXMVKYNVIGQBS-OWOJBTEDSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_COUMARALDEHYDE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C9H8O2/c10-7-1-2-8-3-5-9(11)6-4-8/h1-7,11H/b2-1+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Serines_c" id="M_Serines_c" name="serine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 105.0926</p>
            <p>smiles: [NH3+][C@@H](CO)C([O-])=O</p>
            <p>inchikey: MTCFGRXMJLQNBG-REOHCLBHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_Serines_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MELIBIOSE_c" id="M_MELIBIOSE_c" name="melibiose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 342.2965</p>
            <p>smiles: OC[C@H]1O[C@H](OC[C@H]2O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: DLRVVLDZNNYCBX-ZZFZYMBESA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MELIBIOSE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H22O11/c13-1-3-5(14)8(17)10(19)12(23-3)21-2-4-6(15)7(16)9(18)11(20)22-4/h3-20H,1-2H2/t3-,4-,5+,6-,7+,8+,9-,10-,11-,12+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_AMINO__45__ACETONE_c" id="M_AMINO__45__ACETONE_c" name="aminoacetone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C3H8NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 74.1012</p>
            <p>smiles: CC(=O)C[NH3+]</p>
            <p>inchikey: BCDGQXUMWHRQCB-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AMINO__45__ACETONE_c">
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                <rdf:Bag>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1670.5139</p>
            <p>smiles: [H]C(C)(CCCCCCCCCCCCCCCCCC)C([H])(CCCCCCCCCCCCCCCC([H])(C)C1([H])CC1([H])CCCCCCCCCCCCCCC[C@@]([H])(O)C([H])(CCCCCCCCCCCCCCCCCCCCCCCCCC)C(=O)OC[C@@]1([H])O[C@]([H])(O[C@@]2([H])O[C@]([H])(COP([O-])([O-])=O)[C@@]([H])(O)[C@]([H])(O)[C@@]2([H])O)[C@]([H])(O)[C@@]([H])(O)[C@]1([H])O)OC</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1592.5488</p>
            <p>smiles: [H]C(C)(CCCCCCCCCCCCCCCCCC)C([H])(CCCCCCCCCCCCCCCC([H])(C)C1([H])CC1([H])CCCCCCCCCCCCCCC[C@@]([H])(O)C([H])(CCCCCCCCCCCCCCCCCCCCCCCCCC)C(=O)OC[C@@]1([H])O[C@]([H])(O[C@@]2([H])O[C@]([H])(CO)[C@@]([H])(O)[C@]([H])(O)[C@@]2([H])O)[C@]([H])(O)[C@@]([H])(O)[C@]1([H])O)OC</p>
            <p>inchikey: AMROMUFVHNPOEQ-BZZONOHYSA-N</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H]C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD1G__45__773_c" id="M_CPD1G__45__773_c" name="6-O-cis-keto-mycolyl-trehalose 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C98H187O17P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1668.498</p>
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      <species metaid="M_Aliphatic__45__Amines_c" id="M_Aliphatic__45__Amines_c" name="an aliphatic amine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="CH5NR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]C[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__4125_c" id="M_CPD__45__4125_c" name="avenasterol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H48O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 412.6908</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 400.6801</p>
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            <p>inchikey: SGNBVLSWZMBQTH-PODYLUTMSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 416.6795</p>
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      <species metaid="M_3__45__oxo__45__petroselinoyl__45__ACPs_c" id="M_3__45__oxo__45__petroselinoyl__45__ACPs_c" name="a (6Z)-3-oxooctadec-6-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__3945_c" id="M_CPD__45__3945_c" name="(22&amp;alpha;)-hydroxy-campest-4-en-3-one" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H46O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 414.6636</p>
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            <p>inchikey: FMFAICDKESPFNH-NQMBQAPESA-N</p>
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      <species metaid="M_R__45__3__45__hydroxypetroselinoyl__45__ACPs_c" id="M_R__45__3__45__hydroxypetroselinoyl__45__ACPs_c" name="a (3R,6Z)-3-hydroxyoctadec-6-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__4201_c" id="M_CPD__45__4201_c" name="N6-(&amp;Delta;2-isopentenyl)-adenosine 5&apos;-triphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C15H20N5O13P3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 571.2685</p>
            <p>smiles: CC(C)=CCNc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: OPLVZTYVQUWKHB-SDBHATRESA-J</p>
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      <species metaid="M_Petrosel__45__2__45__enoyl__45__ACPs_c" id="M_Petrosel__45__2__45__enoyl__45__ACPs_c" name="a (2E,6Z)-octadecadienoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_Cis__45__vaccenoyl__45__ACPs_c" id="M_Cis__45__vaccenoyl__45__ACPs_c" name="a cis-vaccenoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33OSR">
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCC\C=C/CCCCCCCCCC(=O)S*</p>
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        </notes>
      </species>
      <species metaid="M_CPD__45__9247_c" id="M_CPD__45__9247_c" name="cis-vaccenate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H33O2">
        <notes>
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            <p>mass: 281.454</p>
            <p>smiles: CCCCCC\C=C/CCCCCCCCCC([O-])=O</p>
            <p>inchikey: UWHZIFQPPBDJPM-FPLPWBNLSA-M</p>
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      <species metaid="M_R__45__3__45__hydroxy__45__cis__45__vaccenoyl__45__ACPs_c" id="M_R__45__3__45__hydroxy__45__cis__45__vaccenoyl__45__ACPs_c" name="a (3R,11Z)-3-hydroxyoctadec-11-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD__45__4203_c" id="M_CPD__45__4203_c" name="N6-(&amp;Delta;2-isopentenyl)-adenosine 5&apos;-diphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C15H20N5O10P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 492.296</p>
            <p>smiles: CC(C)=CCNc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O</p>
            <p>inchikey: VXMXKDAHJURHEN-SDBHATRESA-K</p>
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        </notes>
        <annotation>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__14268_c" id="M_CPD__45__14268_c" name="(15Z)-tetracosenoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C24H45O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 365.6134</p>
            <p>smiles: CCCCCCCC\C=C/CCCCCCCCCCCCCC([O-])=O</p>
            <p>inchikey: GWHCXVQVJPWHRF-KTKRTIGZSA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1112.11</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1100.056</p>
            <p>smiles: CCCCCCCCCCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1102.072</p>
            <p>smiles: CCCCCCCCCCCCCCCCCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: VNJQSRVXTRJVAZ-NGZXMKLGSA-J</p>
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        </notes>
        <annotation>
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        </annotation>
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      <species metaid="M_NONAPRENYL__45__4__45__HYDROXYBENZOATE_c" id="M_NONAPRENYL__45__4__45__HYDROXYBENZOATE_c" name="3-nonaprenyl-4-hydroxybenzoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C52H78O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 751.1739</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\CC\C(C)=C\COC(=O)c1ccc(O)cc1</p>
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        <annotation>
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      <species metaid="M_EIF5A__45__LYSINE_c" id="M_EIF5A__45__LYSINE_c" name="an [eIF5A-precursor]-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H13N3O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Protein__45__S__45__farnesyl__45__L__45__cysteines_c" id="M_Protein__45__S__45__farnesyl__45__L__45__cysteines_c" name="Protein-S-farnesyl-L-cysteines" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ISOCHORISMATE_c" id="M_ISOCHORISMATE_c" name="isochorismate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H8O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 224.168</p>
            <p>smiles: O[C@@H]1[C@@H](OC(=C)C([O-])=O)C=CC=C1C([O-])=O</p>
            <p>inchikey: NTGWPRCCOQCMGE-YUMQZZPRSA-L</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_ISOCHORISMATE_c">
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                <rdf:Bag>
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      <species metaid="M_CPD__45__9924_c" id="M_CPD__45__9924_c" name="2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C14H13O9">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 325.2493</p>
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      <species metaid="M_PROTEIN__45__N__45__UBIQUITYL__45__LYSINE_c" id="M_PROTEIN__45__N__45__UBIQUITYL__45__LYSINE_c" name="a [protein]-N6-monoubiquitinyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C8H16N3O2R3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: *[NH2+]CC(=O)NCCCC[C@H]([NH2+]*)C(*)=O</p>
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        </notes>
      </species>
      <species metaid="M_Ubiquitin__45__C__45__Terminal__45__Glycine_c" id="M_Ubiquitin__45__C__45__Terminal__45__Glycine_c" name="a [ubiquitin] C-terminal glycine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4NO2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)C[NH2+]*</p>
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        </notes>
      </species>
      <species metaid="M_3OH__45__4P__45__OH__45__ALPHA__45__KETOBUTYRATE_c" id="M_3OH__45__4P__45__OH__45__ALPHA__45__KETOBUTYRATE_c" name="(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C4H4O8P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 211.0452</p>
            <p>smiles: O[C@H](COP([O-])([O-])=O)C(=O)C([O-])=O</p>
            <p>inchikey: MZJFVXDTNBHTKZ-UWTATZPHSA-K</p>
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      <species metaid="M_4__45__PHOSPHONOOXY__45__THREONINE_c" id="M_4__45__PHOSPHONOOXY__45__THREONINE_c" name="4-phosphooxy-L-threonine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H8NO7P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 213.0837</p>
            <p>smiles: [NH3+][C@@H]([C@H](O)COP([O-])([O-])=O)C([O-])=O</p>
            <p>inchikey: FKHAKIJOKDGEII-GBXIJSLDSA-L</p>
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        </annotation>
      </species>
      <species metaid="M_COUMARYL__45__ALCOHOL_c" id="M_COUMARYL__45__ALCOHOL_c" name="4-coumaryl alcohol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H10O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 150.1745</p>
            <p>smiles: OC\C=C\c1ccc(O)cc1</p>
            <p>inchikey: PTNLHDGQWUGONS-OWOJBTEDSA-N</p>
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          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_COUMARYL__45__ALCOHOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__497_c" id="M_CPD__45__497_c" name="pseudouridine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N2O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 244.2014</p>
            <p>smiles: OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)c1c[nH]c(=O)[nH]c1=O</p>
            <p>inchikey: PTJWIQPHWPFNBW-GBNDHIKLSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__12014_c" id="M_CPD__45__12014_c" name="6-hydroxymelatonin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H16N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 248.2777</p>
            <p>smiles: COc1cc2c(CCNC(C)=O)c[nH]c2cc1O</p>
            <p>inchikey: OMYMRCXOJJZYKE-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__12014_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__12015_c" id="M_CPD__45__12015_c" name="6-sulfatoxymelatonin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C13H15N2O6S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 327.334</p>
            <p>smiles: COc1cc2c(CCNC(C)=O)c[nH]c2cc1OS([O-])(=O)=O</p>
            <p>inchikey: QQEILXDLZRLTME-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_METHYL__45__MALONYL__45__COA_c" id="M_METHYL__45__MALONYL__45__COA_c" name="(R)-methylmalonyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C25H35N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 862.57</p>
            <p>smiles: C[C@H](C([O-])=O)C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: MZFOKIKEPGUZEN-AGCMQPJKSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_METHYL__45__MALONYL__45__COA_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_INDOXYL_c" id="M_INDOXYL_c" name="indoxyl" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7NO">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 133.1473</p>
            <p>smiles: Oc1c[nH]c2ccccc12</p>
            <p>inchikey: PCKPVGOLPKLUHR-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_INDOXYL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H7NO/c10-8-5-9-7-4-2-1-3-6(7)8/h1-5,9-10H"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
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      <species metaid="M_CPD__45__108_c" id="M_CPD__45__108_c" name="4-methylphenol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 108.1378</p>
            <p>smiles: Cc1ccc(O)cc1</p>
            <p>inchikey: IWDCLRJOBJJRNH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__108_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H8O/c1-6-2-4-7(8)5-3-6/h2-5,8H,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__16819_c" id="M_CPD__45__16819_c" name="4-methylphenyl sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H7O4S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 187.194</p>
            <p>smiles: Cc1ccc(OS([O-])(=O)=O)cc1</p>
            <p>inchikey: WGNAKZGUSRVWRH-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__16819_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      </species>
      <species metaid="M_CPD__45__14115_c" id="M_CPD__45__14115_c" name="(S)-equol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H14O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 242.2699</p>
            <p>smiles: Oc1ccc(cc1)[C@H]1COc2cc(O)ccc2C1</p>
            <p>inchikey: ADFCQWZHKCXPAJ-GFCCVEGCSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__14115_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__16825_c" id="M_CPD__45__16825_c" name="(S)-equol 4&apos;-sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C15H13O6S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 321.326</p>
            <p>smiles: Oc1ccc2C[C@H](COc2c1)c1ccc(OS([O-])(=O)=O)cc1</p>
            <p>inchikey: UXOJWGSGKUYMIA-GFCCVEGCSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__16825_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_THMPT_c" id="M_THMPT_c" name="tetrahydromethanopterin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_METHYLENETETRAHYDROMETHANOPTERIN_c" id="M_METHYLENETETRAHYDROMETHANOPTERIN_c" name="5,10-methylene-tetrahydromethanopterin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C31H42N6O16P">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 785.6712</p>
            <p>smiles: [H][C@@]12[C@@H](C)N(CN1c1c(N[C@H]2C)nc(N)[nH]c1=O)c1ccc(C[C@H](O)[C@H](O)[C@H](O)CO[C@H]2O[C@H](COP([O-])(=O)O[C@@H](CCC([O-])=O)C([O-])=O)[C@@H](O)[C@H]2O)cc1</p>
            <p>inchikey: GBMIGEWJAPFSQI-CAFBYHECSA-K</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_METHYLENETETRAHYDROMETHANOPTERIN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
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        </annotation>
      </species>
      <species metaid="M_2__45__KETO__45__GLUTARAMATE_c" id="M_2__45__KETO__45__GLUTARAMATE_c" name="2-oxoglutaramate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H6NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 144.106</p>
            <p>smiles: NC(=O)CCC(=O)C([O-])=O</p>
            <p>inchikey: COJBGNAUUSNXHX-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_2__45__KETO__45__GLUTARAMATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H7NO4/c6-4(8)2-1-3(7)5(9)10/h1-2H2,(H2,6,8)(H,9,10)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__16876_c" id="M_CPD__45__16876_c" name="2-hydroxy-5-oxoproline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H6NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 144.106</p>
            <p>smiles: O[C@]1(CCC(=O)N1)C([O-])=O</p>
            <p>inchikey: XWXRVFUXLXYGHK-RXMQYKEDSA-M</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__16876_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Carboxylic__45__esters_c" id="M_Carboxylic__45__esters_c" name="a carboxylic ester" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [*]C(=O)O[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Nucleotides_c" id="M_Nucleotides_c" name="a nucleotide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Nucleosides_c" id="M_Nucleosides_c" name="a nucleoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O4R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H]([*])[C@H](O)[C@@H]1O</p>
          </body>
        </notes>
      </species>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 122.187</p>
            <p>smiles: [NH3+]CCc1ccccc1</p>
            <p>inchikey: BHHGXPLMPWCGHP-UHFFFAOYSA-O</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_PHENYLETHYLAMINE_c">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_Aliphatic__45__L__45__Amino__45__Acids_c" id="M_Aliphatic__45__L__45__Amino__45__Acids_c" name="an aliphatic L-amino acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_N__45__Substituted__45__Aminoacyl__45__tRNA_c" id="M_N__45__Substituted__45__Aminoacyl__45__tRNA_c" name="an N-modified aminoacyl-[tRNA]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_N__45__Substituted__45__Amino__45__Acids_c" id="M_N__45__Substituted__45__Amino__45__Acids_c" name="an N-modified amino acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C3H2NO3R2">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 221.259</p>
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            <p>inchikey: XXFACTAYGKKOQB-SSDOTTSWSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 383.3996</p>
            <p>smiles: CC(CCNc1ncnc2[nH]cnc12)CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O</p>
            <p>inchikey: QRZHDHJUYBONQQ-UFZVAZPKSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPDQT__45__520_c" id="M_CPDQT__45__520_c" name="phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C40H75O13P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 825.9649</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 747.9998</p>
            <p>smiles: CCCCCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCC\C=C/CCCCCCCC)COP([O-])(=O)OC[C@@H](O)CO</p>
            <p>inchikey: GTCKEWVHTGGUSN-HGWHEPCSSA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 219.2431</p>
            <p>smiles: C\C(CO)=C\CNc1ncnc2[nH]cnc12</p>
            <p>inchikey: UZKQTCBAMSWPJD-UQCOIBPSSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1590.5329</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 381.3837</p>
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      <species metaid="M_CPD1G__45__774_c" id="M_CPD1G__45__774_c" name="6-O-trans-keto-mycolyl-trehalose 6-phosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C98H187O17P">
        <notes>
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            <p>mass: 1668.498</p>
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      <species metaid="M_L__45__ALPHA__45__AMINO__45__EPSILON__45__KETO__45__PIMELATE_c" id="M_L__45__ALPHA__45__AMINO__45__EPSILON__45__KETO__45__PIMELATE_c" name="L-&amp;alpha;-amino-&amp;epsilon;-keto-pimelate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C7H10NO5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 188.1585</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]C[*]</p>
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      <species metaid="M_DIPHOSPHO__45__1D__45__MYO__45__INOSITOL__45__TETRAKISPHOSPH_c" id="M_DIPHOSPHO__45__1D__45__MYO__45__INOSITOL__45__TETRAKISPHOSPH_c" name="a diphospho-1D-myo-inositol tetrakisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-11" fbc:chemicalFormula="C6H7O24P6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 648.954</p>
            <p>smiles: [H][C@@]1(O)[C@@]([H])(OP([O-])([O-])=O)[C@@]([H])(OP([O-])([O-])=O)[C@@]([H])(OP([O-])([O-])=O)[C@]([H])(OP([O-])(=O)OP([O-])([O-])=O)[C@@]1([H])OP([O-])([O-])=O</p>
            <p>inchikey: DKLABXZLIOMPIM-UOTPTPDRSA-C</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIPHOSPHO__45__1D__45__MYO__45__INOSITOL__45__TETRAKISPHOSPH_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H18O24P6/c7-1-2(25-31(8,9)10)4(27-33(14,15)16)6(28-34(17,18)19)5(3(1)26-32(11,12)13)29-36(23,24)30-35(20,21)22/h1-7H,(H,23,24)(H2,8,9,10)(H2,11,12,13)(H2,14,15,16)(H2,17,18,19)(H2,20,21,22)/p-11/t1-,2-,3+,4-,5-,6-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Monoamines_c" id="M_Monoamines_c" name="a monoamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Diamines_c" id="M_Diamines_c" name="a diamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__4889_c" id="M_CPD__45__4889_c" name="(E)-&amp;beta;-ocimene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 136.234</p>
            <p>smiles: CC(C)=CC\C=C(/C)C=C</p>
            <p>inchikey: IHPKGUQCSIINRJ-CSKARUKUSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__4889_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_HISTAMINE_c" id="M_HISTAMINE_c" name="histamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="C5H10N3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 112.1525</p>
            <p>smiles: [NH3+]CCc1c[nH]cn1</p>
            <p>inchikey: NTYJJOPFIAHURM-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_HISTAMINE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H9N3/c6-2-1-5-3-7-4-8-5/h3-4H,1-2,6H2,(H,7,8)/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__466_c" id="M_CPD__45__466_c" name="(S)-3-amino-2-methylpropanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 103.1198</p>
            <p>smiles: C[C@@H](C[NH3+])C([O-])=O</p>
            <p>inchikey: QCHPKSFMDHPSNR-VKHMYHEASA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__466_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C4H9NO2/c1-3(2-5)4(6)7/h3H,2,5H2,1H3,(H,6,7)/t3-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Aromatic__45__Amino__45__Acids_c" id="M_Aromatic__45__Amino__45__Acids_c" name="an aromatic amino acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4NO2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]C([*])C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Aromatic__45__Oxoacids_c" id="M_Aromatic__45__Oxoacids_c" name="an aromatic 2-oxo-acid" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C2O3R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [O-]C(=O)C([*])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__14736_c" id="M_CPD__45__14736_c" name="L-kynurenine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 208.2139</p>
            <p>smiles: Nc1ccccc1C(=O)C[C@H]([NH3+])C([O-])=O</p>
            <p>inchikey: YGPSJZOEDVAXAB-QMMMGPOBSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__14736_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H12N2O3/c11-7-4-2-1-3-6(7)9(13)5-8(12)10(14)15/h1-4,8H,5,11-12H2,(H,14,15)/t8-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Dodec__45__2__45__enoyl__45__ACPs_c" id="M_Dodec__45__2__45__enoyl__45__ACPs_c" name="a (2E)-dodec-2-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H21OSR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CCCCCCCCC\C=C\C(=O)S[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_TRANS__45__23__45__DEHYDROADIPYL__45__COA_c" id="M_TRANS__45__23__45__DEHYDROADIPYL__45__COA_c" name="trans-2,3-dehydroadipyl-coA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C27H37N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 888.607</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)C(O)C(=O)NCCC(=O)NCCSC(=O)\C=C\CCC([O-])=O</p>
            <p>inchikey: ZFXICKRXPZTFPB-UWIQVNQSSA-I</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_TRANS__45__23__45__DEHYDROADIPYL__45__COA_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MPBQ_c" id="M_MPBQ_c" name="2-methyl-6-phytyl-1,4-benzoquinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H46O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 402.6529</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC\C(C)=C\Cc1cc(O)cc(C)c1O</p>
            <p>inchikey: GTWCNYRFOZKWTL-UOFXASEASA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MPBQ_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C27H46O2/c1-20(2)10-7-11-21(3)12-8-13-22(4)14-9-15-23(5)16-17-25-19-26(28)18-24(6)27(25)29/h16,18-22,28-29H,7-15,17H2,1-6H3/b23-16+/t21-,22-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_DMPBQ_c" id="M_DMPBQ_c" name="2,3-dimethyl-6-phytyl-1,4-benzoquinol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H48O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 416.6795</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC\C(C)=C\Cc1cc(O)c(C)c(C)c1O</p>
            <p>inchikey: SUFZKUBNOVDJRR-WGEODTKDSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DMPBQ_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C28H48O2/c1-20(2)11-8-12-21(3)13-9-14-22(4)15-10-16-23(5)17-18-26-19-27(29)24(6)25(7)28(26)30/h17,19-22,29-30H,8-16,18H2,1-7H3/b23-17+/t21-,22-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_DELTA__45__TOCOPHEROL_c" id="M_DELTA__45__TOCOPHEROL_c" name="&amp;delta;-tocopherol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H46O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 402.6529</p>
            <p>smiles: CC(C)CCC[C@@H](C)CCC[C@@H](C)CCC[C@]1(C)CCc2cc(O)cc(C)c2O1</p>
            <p>inchikey: GZIFEOYASATJEH-VHFRWLAGSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DELTA__45__TOCOPHEROL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C27H46O2/c1-20(2)10-7-11-21(3)12-8-13-22(4)14-9-16-27(6)17-15-24-19-25(28)18-23(5)26(24)29-27/h18-22,28H,7-17H2,1-6H3/t21-,22-,27-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_BCAA__45__dehydrogenase__45__2MB__45__DH__45__lipoyl_c" id="M_BCAA__45__dehydrogenase__45__2MB__45__DH__45__lipoyl_c" name="an [apo BCAA dehydrogenase E2 protein] N6-S-[2-methylbutanoyl]dihydrolipoyl-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H23O2S2R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_N__45__ACETYL__45__SEROTONIN_c" id="M_N__45__ACETYL__45__SEROTONIN_c" name="N-acetyl-serotonin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H14N2O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 218.2518</p>
            <p>smiles: CC(=O)NCCc1c[nH]c2ccc(O)cc12</p>
            <p>inchikey: MVAWJSIDNICKHF-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_N__45__ACETYL__45__SEROTONIN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H14N2O2/c1-8(15)13-5-4-9-7-14-12-3-2-10(16)6-11(9)12/h2-3,6-7,14,16H,4-5H2,1H3,(H,13,15)"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__12017_c" id="M_CPD__45__12017_c" name="N-acetyl-serotonin sulfate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H13N2O5S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 297.308</p>
            <p>smiles: CC(=O)NCCc1c[nH]c2ccc(OS([O-])(=O)=O)cc12</p>
            <p>inchikey: UCAJZNVFRVLULS-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__12017_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C12H14N2O5S/c1-8(15)13-5-4-9-7-14-12-3-2-10(6-11(9)12)19-20(16,17)18/h2-3,6-7,14H,4-5H2,1H3,(H,13,15)(H,16,17,18)/p-1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CONIFERYL__45__ALDEHYDE_c" id="M_CONIFERYL__45__ALDEHYDE_c" name="coniferaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H10O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 178.1846</p>
            <p>smiles: COc1cc(\C=C\C=O)ccc1O</p>
            <p>inchikey: DKZBBWMURDFHNE-NSCUHMNNSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CONIFERYL__45__ALDEHYDE_c">
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      <species metaid="M_CPD__45__12016_c" id="M_CPD__45__12016_c" name="N-acetyl-serotonin glucuronide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C18H21N2O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 393.3685</p>
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            <p>inchikey: DRKQFNYKSNWOTC-UHFFFAOYSA-M</p>
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        </notes>
        <annotation>
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        </annotation>
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      <species metaid="M_BETA__45__TOCOPHEROL_c" id="M_BETA__45__TOCOPHEROL_c" name="&amp;beta;-tocopherol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H48O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 416.6795</p>
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            <p>inchikey: WGVKWNUPNGFDFJ-DQCZWYHMSA-N</p>
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      <species metaid="M_CPD__45__11647_c" id="M_CPD__45__11647_c" name="thermospermine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="4" fbc:chemicalFormula="C10H30N4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 206.3698</p>
            <p>smiles: [NH3+]CCCC[NH2+]CCC[NH2+]CCC[NH3+]</p>
            <p>inchikey: DODDBCGMRAFLEB-UHFFFAOYSA-R</p>
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        </notes>
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      <species metaid="M_Ferrihemoglobins_c" id="M_Ferrihemoglobins_c" name="a ferrihemoglobin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_ACETYL__45__ETCETERA__45__L__45__ASPARAGINE_c" id="M_ACETYL__45__ETCETERA__45__L__45__ASPARAGINE_c" name="N4-(&amp;beta;-N-acetyl-D-glucosaminyl)-L-asparagine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H21N3O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 335.3104</p>
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        <annotation>
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      <species metaid="M_N__45__ACETYL__45__BETA__45__GLUCOSAMINYLAMINE_c" id="M_N__45__ACETYL__45__BETA__45__GLUCOSAMINYLAMINE_c" name="N-acetyl-&amp;beta;-glucosaminylamine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H16N2O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 220.223</p>
            <p>smiles: CC(=O)N[C@H]1[C@H](N)O[C@H](CO)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: MCGXOCXFFNKASF-FMDGEEDCSA-N</p>
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      <species metaid="M_Charged__45__fMET__45__tRNAs_c" id="M_Charged__45__fMET__45__tRNAs_c" name="an N-formyl-L-methionylaminoacyl-tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_L__45__Methionylaminoacyl__45__tRNAs_c" id="M_L__45__Methionylaminoacyl__45__tRNAs_c" name="a L-methionylaminoacyl-tRNA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_FORMYL__45__L__45__METHIONYL__45__PEPTIDE_c" id="M_FORMYL__45__L__45__METHIONYL__45__PEPTIDE_c" name="a [protein] N-terminal-formyl-L-methionine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H16N4O6R3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CARDIOLIPIN_c" id="M_CARDIOLIPIN_c" name="a cardiolipin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C13H16O17P2R4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC(COP([O-])(=O)OC[C@@H](COC([*])=O)OC([*])=O)COP([O-])(=O)OC[C@@H](COC([*])=O)OC([*])=O</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 266.25</p>
            <p>smiles: OC[C@]1(O)NC(=O)[C@](O)(Cc2ccccc2)NC1=O</p>
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        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 842.852</p>
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CS[C@@]1(CO)NC(=O)[C@](Cc2ccccc2)(NC1=O)SC[C@H](NC(=O)CC[C@H]([NH3+])C([O-])=O)C(=O)NCC([O-])=O)C(=O)NCC([O-])=O)C([O-])=O</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__17049_c" id="M_CPD__45__17049_c" name="3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H14N2O3S2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 298.381</p>
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            <p>inchikey: VZGSJJJQZPTKGR-VXGBXAGGSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 296.365</p>
            <p>smiles: OC[C@@]12NC(=O)[C@@](Cc3ccccc3)(NC1=O)SS2</p>
            <p>inchikey: POIIJAAGMGNXLO-RYUDHWBXSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 380.1694</p>
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            <p>inchikey: PJDXUYNCNWFPCZ-IUYQGCFVSA-K</p>
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      <species metaid="M_CPD__45__16953_c" id="M_CPD__45__16953_c" name="2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N5O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 223.2318</p>
            <p>smiles: C[C@@H](O)C1=Nc2c(N[C@H]1C)nc(N)[nH]c2=O</p>
            <p>inchikey: GHRBCDHNYSUFRN-IUYQGCFVSA-N</p>
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          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Reduced__45__CycA1__45__cytochromes_e" id="M_Reduced__45__CycA1__45__cytochromes_e" name="Reduced-CycA1-cytochromes" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_cis__45__delta11__45__3__45__oxo__45__melissoyl__45__ACPs_c" id="M_cis__45__delta11__45__3__45__oxo__45__melissoyl__45__ACPs_c" name="a cis-delta11-3-oxo-C30:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_cis__45__delta11__45__3__45__hydroxymelissoyl__45__ACPs_c" id="M_cis__45__delta11__45__3__45__hydroxymelissoyl__45__ACPs_c" name="a cis-delta11-3-hydroxyC30:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__4888_c" id="M_CPD__45__4888_c" name="&amp;beta;-myrcene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 136.234</p>
            <p>smiles: CC(C)=CCCC(=C)C=C</p>
            <p>inchikey: UAHWPYUMFXYFJY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__4888_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H16/c1-5-10(4)8-6-7-9(2)3/h5,7H,1,4,6,8H2,2-3H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__468_c" id="M_CPD__45__468_c" name="L-2-aminoadipate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H10NO4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 160.1484</p>
            <p>smiles: [NH3+][C@@H](CCCC([O-])=O)C([O-])=O</p>
            <p>inchikey: OYIFNHCXNCRBQI-BYPYZUCNSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__468_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H11NO4/c7-4(6(10)11)2-1-3-5(8)9/h4H,1-3,7H2,(H,8,9)(H,10,11)/p-1/t4-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_N2__45__ACETYL__45__ALPHA__45__AMIN_c" id="M_N2__45__ACETYL__45__ALPHA__45__AMIN_c" name="N2-acetyl-&amp;alpha;-aminoadipate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C8H11NO5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 201.1777</p>
            <p>smiles: CC(=O)N[C@@H](CCCC([O-])=O)C([O-])=O</p>
            <p>inchikey: FTTGAAZKBNZDCZ-LURJTMIESA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_N2__45__ACETYL__45__ALPHA__45__AMIN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H13NO5/c1-5(10)9-6(8(13)14)3-2-4-7(11)12/h6H,2-4H2,1H3,(H,9,10)(H,11,12)(H,13,14)/p-2/t6-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_AMMONIUM_e" id="M_AMMONIUM_e" name="ammonium" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="H4N">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 18.0379</p>
            <p>smiles: [H][N+]([H])([H])[H]</p>
            <p>inchikey: QGZKDVFQNNGYKY-UHFFFAOYSA-O</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_AMMONIUM_e">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/H3N/h1H3/p+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__14378_c" id="M_CPD__45__14378_c" name="dehydrospermidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="3" fbc:chemicalFormula="C7H20N3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 146.2522</p>
            <p>smiles: [NH3+]CCC\C=[NH+]\CCC[NH3+]</p>
            <p>inchikey: YAVLYBVKPXLZEQ-UXBLZVDNSA-Q</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__14378_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C7H17N3/c8-4-1-2-6-10-7-3-5-9/h6H,1-5,7-9H2/p+3/b10-6+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_cis__45__D19__45__37__45__MOH__45__38__45__Me__45__C57__45__1__45__ACPs_c" id="M_cis__45__D19__45__37__45__MOH__45__38__45__Me__45__C57__45__1__45__ACPs_c" name="a cis-delta19-37-methoxy-38-methyl-C57:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Deoxyhypusine__45__Synthase__45__Lysine_c" id="M_Deoxyhypusine__45__Synthase__45__Lysine_c" name="a [deoxyhypusine synthase]-L-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C6H14N2OR2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]CCCC[C@H]([NH2+]*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_N__45__4__45__aminobutylidene__45__enzyme__45__lysine_c" id="M_N__45__4__45__aminobutylidene__45__enzyme__45__lysine_c" name="a [deoxyhypusine synthase]-N-(4-aminobutylidene)-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_cis__45__delta13__45__3__45__oxo__45__lacceroyl__45__ACPs_c" id="M_cis__45__delta13__45__3__45__oxo__45__lacceroyl__45__ACPs_c" name="a cis-delta13-3-oxo-C32:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_N__45__4__45__aminobutylidene__45__eIF5A__45__lysine_c" id="M_N__45__4__45__aminobutylidene__45__eIF5A__45__lysine_c" name="an [eIF5A-precursor]-N-(4-aminobutylidene)-lysine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="C11H22N4O2R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+]CCC\C=[NH+]\CCCC[C@H](NC([*])=O)C(=O)N[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_cis__45__delta21__45__3__45__hydroxyC40__45__ACPs_c" id="M_cis__45__delta21__45__3__45__hydroxyC40__45__ACPs_c" name="a cis-delta21-3-hydroxyC40:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__505_c" id="M_CPD__45__505_c" name="D-myo-inositol (1,3,4,6)-tetrakisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-8" fbc:chemicalFormula="C6H8O18P4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 492.0164</p>
            <p>smiles: O[C@H]1[C@H](OP([O-])([O-])=O)[C@@H](OP([O-])([O-])=O)[C@@H](O)[C@@H](OP([O-])([O-])=O)[C@@H]1OP([O-])([O-])=O</p>
            <p>inchikey: ZAWIXNGTTZTBKV-JMVOWJSSSA-F</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__505_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H16O18P4/c7-1-3(21-25(9,10)11)5(23-27(15,16)17)2(8)6(24-28(18,19)20)4(1)22-26(12,13)14/h1-8H,(H2,9,10,11)(H2,12,13,14)(H2,15,16,17)(H2,18,19,20)/p-8/t1-,2+,3-,4+,5-,6+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_S__45__ubiquitinyl__45__UAP__45__E1__45__L__45__cysteine_c" id="M_S__45__ubiquitinyl__45__UAP__45__E1__45__L__45__cysteine_c" name="an [E1 ubiquitin-activating enzyme]-S-ubiquitinyl-L-cysteine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H7N2O2SR3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: *NCC(=O)SC[C@H](N*)C(*)=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Ferrohemoglobins_c" id="M_Ferrohemoglobins_c" name="a ferrohemoglobin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_METHIONYL__45__PEPTIDE_c" id="M_METHIONYL__45__PEPTIDE_c" name="an N-terminal L-methionyl-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H16N4O5R3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_DIVINYLCHLOROPHYLLIDE__45__A_c" id="M_DIVINYLCHLOROPHYLLIDE__45__A_c" name="3,8-divinyl chlorophyllide a" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C35H30MgN4O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 610.943</p>
            <p>smiles: COC(=O)[C-]1C(=O)c2c(C)c3C=C4C(C=C)=C(C)C5=[N+]4[Mg--]46n3c2C1=C1[C@@H](CCC([O-])=O)[C@H](C)C(C=c2c(C)c(C=C)c(=C5)n42)=[N+]61</p>
            <p>inchikey: UNSKJTNUDHVNJT-PVMVIUQGSA-K</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_DIVINYLCHLOROPHYLLIDE__45__A_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C35H33N4O5.Mg/c1-8-19-15(3)22-12-24-17(5)21(10-11-28(40)41)32(38-24)30-31(35(43)44-7)34(42)29-18(6)25(39-33(29)30)14-27-20(9-2)16(4)23(37-27)13-26(19)36-22;/h8-9,12-14,17,21H,1-2,10-11H2,3-7H3,(H3,36,37,38,39,40,41,42);/q-1;+2/p-3/t17-,21-;/m0./s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_5__45__HYDROXY__45__FERULIC__45__ACID_c" id="M_5__45__HYDROXY__45__FERULIC__45__ACID_c" name="5-hydroxyferulate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C10H9O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 209.176</p>
            <p>smiles: COc1cc(C=CC([O-])=O)cc(O)c1O</p>
            <p>inchikey: YFXWTVLDSKSYLW-NSCUHMNNSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_5__45__HYDROXY__45__FERULIC__45__ACID_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C10H10O5/c1-15-8-5-6(2-3-9(12)13)4-7(11)10(8)14/h2-5,11,14H,1H3,(H,12,13)/p-1/b3-2+"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_3__45__UREIDO__45__ISOBUTYRATE_c" id="M_3__45__UREIDO__45__ISOBUTYRATE_c" name="3-(carbamoylamino)-2-methylpropanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C5H9N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 145.1371</p>
            <p>smiles: C[C@H](CNC(N)=O)C([O-])=O</p>
            <p>inchikey: PHENTZNALBMCQD-GSVOUGTGSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_3__45__UREIDO__45__ISOBUTYRATE_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C5H10N2O3/c1-3(4(8)9)2-7-5(6)10/h3H,2H2,1H3,(H,8,9)(H3,6,7,10)/p-1/t3-/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__5161_c" id="M_CPD__45__5161_c" name="&amp;alpha;-D-Man-(1&amp;rarr;3)-&amp;beta;-D-Man-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;4)-&amp;alpha;-D-GlcNAc-diphosphodolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__5162_c" id="M_CPD__45__5162_c" name="&amp;alpha;-D-Man-(1&amp;rarr;3)-[&amp;alpha;-D-Man-(1&amp;rarr;6)]-&amp;alpha;-D-Man-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;4)-&amp;alpha;-D-GlcNAc-diphosphodolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C114H188N2O32P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 2160.6553</p>
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        <notes>
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            <p>mass: 103.1198</p>
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            <p>inchikey: QCHPKSFMDHPSNR-GSVOUGTGSA-N</p>
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        <notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 208.2106</p>
            <p>smiles: [H]C(=O)\C=C\c1cc(OC)c(O)c(OC)c1</p>
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      <species metaid="M_SINAPOYL__45__COA_c" id="M_SINAPOYL__45__COA_c" name="sinapoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C32H42N7O20P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 969.699</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 457.4285</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 295.2879</p>
            <p>smiles: OC[C@H]1O[C@@H](O[C@@H](C#N)c2ccccc2)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: ZKSZEJFBGODIJW-GMDXDWKASA-N</p>
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      <species metaid="M_DOLICHOL_c" id="M_DOLICHOL_c" name="a dolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_2__45__hydroxyacyl__45__glutathiones_c" id="M_2__45__hydroxyacyl__45__glutathiones_c" name="S-(2-hydroxyacyl)glutathione" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C12H17N3O8SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [NH3+][C@@H](CCC(=O)N[C@@H](CSC(=O)C(O)[*])C(=O)NCC([O-])=O)C([O-])=O</p>
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        </notes>
      </species>
      <species metaid="M_CPD__45__7214_c" id="M_CPD__45__7214_c" name="(2S)-dihydrotricetin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 304.2516</p>
            <p>smiles: Oc1cc(O)c2C(=O)C[C@H](Oc2c1)c1cc(O)c(O)c(O)c1</p>
            <p>inchikey: USQXPEWRYWRRJD-LBPRGKRZSA-N</p>
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      <species metaid="M_R__45__3__45__hydroxyhexanoyl__45__ACPs_c" id="M_R__45__3__45__hydroxyhexanoyl__45__ACPs_c" name="a (3R)-3-hydroxyhexanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Oxidized__45__CycA1__45__cytochromes_e" id="M_Oxidized__45__CycA1__45__cytochromes_e" name="Oxidized-CycA1-cytochromes" compartment="e" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_ARACHIDIC_ACID_c" id="M_ARACHIDIC_ACID_c" name="ARACHIDIC_ACID" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H39O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 311.523</p>
            <p>smiles: CCCCCCCCCCCCCCCCCCCC([O-])=O</p>
            <p>inchikey: VKOBVWXKNCXXDE-UHFFFAOYSA-M</p>
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      <species metaid="M_R__45__3__45__hydroxystearoyl__45__ACPs_c" id="M_R__45__3__45__hydroxystearoyl__45__ACPs_c" name="a (3R)-3-hydroxyoctadecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H35O2SR">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Apo__45__EntF_c" id="M_Apo__45__EntF_c" name="an apo-[EntF L-seryl-carrier protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Holo__45__EntF_c" id="M_Holo__45__EntF_c" name="a holo-[EntF L-seryl-carrier protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_cis__45__delta21__45__3__45__oxo__45__C40__45__ACPs_c" id="M_cis__45__delta21__45__3__45__oxo__45__C40__45__ACPs_c" name="a cis-delta21-3-oxo-C40:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_R__45__3__45__hydroxyarachidoyl__45__ACPs_c" id="M_R__45__3__45__hydroxyarachidoyl__45__ACPs_c" name="a (3R)-3-hydroxyicosanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_trans__45__D18__45__37__45__OH__45__38__45__Me__45__C58__45__1__45__ACPs_c" id="M_trans__45__D18__45__37__45__OH__45__38__45__Me__45__C58__45__1__45__ACPs_c" name="a trans-delta18-37-hydroxy-20,38-dimethyl-C58:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_trans__45__D18__45__37__45__MOH__45__38__45__Me__45__C58__45__1__45__ACPs_c" id="M_trans__45__D18__45__37__45__MOH__45__38__45__Me__45__C58__45__1__45__ACPs_c" name="a trans-delta18-37-methoxy-20,38-dimethyl-C58:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_trans__45__18__45__CP__45__37__45__Mex__45__38__45__Me__45__C60__45__ACPs_c" id="M_trans__45__18__45__CP__45__37__45__Mex__45__38__45__Me__45__C60__45__ACPs_c" name="a trans-methoxy-C60-meroacyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      </species>
      <species metaid="M_CPD__45__8120_c" id="M_CPD__45__8120_c" name="CPD-8120" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C20H33O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 305.4754</p>
            <p>smiles: CCCCC\C=C/C\C=C/C\C=C/CCCCCCC([O-])=O</p>
            <p>inchikey: HOBAELRKJCKHQD-QNEBEIHSSA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_CPD__45__14423_c" id="M_CPD__45__14423_c" name="(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C43H62N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1089.977</p>
            <p>smiles: CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12</p>
            <p>inchikey: SLYKKQSPRFJDAF-HVGANWHPSA-J</p>
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        </notes>
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      <species metaid="M_cis__45__delta15__45__3__45__hydroxygheddoyl__45__ACPs_c" id="M_cis__45__delta15__45__3__45__hydroxygheddoyl__45__ACPs_c" name="a cis-delta15-3-hydroxyC34:1-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_CPD__45__14424_c" id="M_CPD__45__14424_c" name="(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C43H64N7O18P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 1091.993</p>
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        </notes>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__12199_c" id="M_CPD__45__12199_c" name="3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C30H40N7O19P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 927.663</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 925.647</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 883.61</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 546.2717</p>
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      <species metaid="M_SINAPYL__45__ALCOHOL_c" id="M_SINAPYL__45__ALCOHOL_c" name="sinapyl alcohol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H14O4">
        <notes>
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            <p>mass: 210.2265</p>
            <p>smiles: COc1cc(\C=C\CO)cc(OC)c1O</p>
            <p>inchikey: LZFOPEXOUVTGJS-ONEGZZNKSA-N</p>
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      <species metaid="M_UDP__45__D__45__GALACTURONATE_c" id="M_UDP__45__D__45__GALACTURONATE_c" name="UDP-&amp;alpha;-D-galacturonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-3" fbc:chemicalFormula="C15H19N2O18P2">
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 577.2631</p>
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      <species metaid="M_CPD__45__5166_c" id="M_CPD__45__5166_c" name="&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;3)-[&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;3)-&amp;alpha;-D-Man-(1&amp;rarr;6)]-&amp;beta;-D-Man-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;4)-&amp;alpha;-D-GlcNAc-diphosphodolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CPD__45__5167_c" id="M_CPD__45__5167_c" name="&amp;alpha;-D-Man-a-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;3)-[&amp;alpha;-D-Man-(1&amp;rarr;2)-&amp;alpha;-D-Man-(1&amp;rarr;3)-[&amp;alpha;-D-Man-(1&amp;rarr;6)]-&amp;alpha;-D-Man-(1&amp;rarr;6)]-&amp;beta;-D-Man-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;4)-&amp;alpha;-D-GlcNAc-diphosphodolichol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C144H238N2O57P2">
        <notes>
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            <p>mass: 2971.3583</p>
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            <p>mass: 495.4538</p>
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            <p>mass: 494.4464</p>
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        <notes>
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            <p>mass: 342.2965</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 594.9487</p>
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            <p>inchikey: DOZKMFVMCATMEH-OZKTZCCCSA-N</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 757.0893</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 674.9297</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_cis__45__delta7__45__3__45__hydroxycerotoyl__45__ACPs_c" id="M_cis__45__delta7__45__3__45__hydroxycerotoyl__45__ACPs_c" name="a (3R,7Z)-3-hydroxyhexacos-7-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_cis__45__delta7__45__3__45__oxo__45__cerotoyl__45__ACPs_c" id="M_cis__45__delta7__45__3__45__oxo__45__cerotoyl__45__ACPs_c" name="a (7Z)-3-oxohexacos-7-enoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Glucuronosylated__45__Glucuronoside__45__Acceptors_c" id="M_Glucuronosylated__45__Glucuronoside__45__Acceptors_c" name="a glucuronated glucosyluronate acceptor" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 605.3389</p>
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          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 154.0822</p>
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        <notes>
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            <p>mass: 168.1088</p>
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            <p>mass: 184.1268</p>
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            <p>mass: 179.15</p>
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        <notes>
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            <p>mass: 721.7502</p>
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        </annotation>
      </species>
      <species metaid="M_CPD__45__11668_c" id="M_CPD__45__11668_c" name="dihydroxyferuloyl-sinapoyl spermidine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H45N3O12">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 735.7768</p>
            <p>smiles: [H]\C(=C(\[H])c1cc(O)c(O)c(OC)c1)C([O-])=[NH+]CCCCN(CCC[NH+]=C([O-])C(\[H])=C(/[H])c1cc(OC)c(O)c(OC)c1)C(=O)C(\[H])=C(/[H])c1cc(O)c(O)c(OC)c1</p>
            <p>inchikey: FDECXSCMWXHRNU-FOXWYSRTSA-N</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__11668_c">
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      <species metaid="M_CPD__45__236_c" id="M_CPD__45__236_c" name="gibberellin A29" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H23O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 347.3829</p>
            <p>smiles: [H][C@@]12CC[C@]3(O)C[C@]1(CC3=C)[C@@H](C([O-])=O)[C@]1([H])[C@@]3(C)C[C@@H](O)C[C@@]21OC3=O</p>
            <p>inchikey: BKBYHSYZKIAJDA-WWSAFQOPSA-M</p>
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        <annotation>
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        </annotation>
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      <species metaid="M_Glutaminyl__45__Peptides_c" id="M_Glutaminyl__45__Peptides_c" name="Glutaminyl-Peptides" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_5__45__OXOPROLYL__45__PEPTIDE_c" id="M_5__45__OXOPROLYL__45__PEPTIDE_c" name="5-OXOPROLYL-PEPTIDE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
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      <species metaid="M_CPD1F__45__140_c" id="M_CPD1F__45__140_c" name="gibberellin A20" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C19H23O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 331.3835</p>
            <p>smiles: [H][C@@]12CC[C@]3(O)C[C@]1(CC3=C)[C@@H](C([O-])=O)[C@]1([H])[C@@]3(C)CCC[C@@]21OC3=O</p>
            <p>inchikey: OXFPYCSNYOFUCH-KQBHUUJHSA-M</p>
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        </annotation>
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      <species metaid="M_GLUTARATE_c" id="M_GLUTARATE_c" name="glutarate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H6O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 130.0998</p>
            <p>smiles: [O-]C(=O)CCCC([O-])=O</p>
            <p>inchikey: JFCQEDHGNNZCLN-UHFFFAOYSA-L</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_GLUTARATE_c">
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      <species metaid="M_CPD__45__12287_c" id="M_CPD__45__12287_c" name="hydrogen bromide" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="Br">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 79.905</p>
            <p>smiles: [Br-]</p>
            <p>inchikey: CPELXLSAUQHCOX-UHFFFAOYSA-M</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_Tau__45__proteins_c" id="M_Tau__45__proteins_c" name="a tau protein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_O__45__phospho__45__tau__45__proteins_c" id="M_O__45__phospho__45__tau__45__proteins_c" name="an O-phospho-tau protein" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_TYR__45__tRNAs_c" id="M_TYR__45__tRNAs_c" name="a tRNATyr" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="RH">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Charged__45__TYR__45__tRNAs_c" id="M_Charged__45__TYR__45__tRNAs_c" name="an L-tyrosyl-[tRNATyr]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__16015_c" id="M_CPD__45__16015_c" name="2-iminopropanoate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5NO2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 87.0773</p>
            <p>smiles: CC(=[NH2+])C([O-])=O</p>
            <p>inchikey: DUAWRLXHCUAWMK-UHFFFAOYSA-N</p>
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        </notes>
        <annotation>
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                </rdf:Bag>
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      <species metaid="M_CPD__45__6972_c" id="M_CPD__45__6972_c" name="4-(2&apos;-carboxyphenyl)-4-oxobutyryl-CoA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-5" fbc:chemicalFormula="C32H39N7O20P3S">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 966.676</p>
            <p>smiles: CC(C)(COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP([O-])([O-])=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)c1ccccc1C(=O)CCC([O-])=O</p>
            <p>inchikey: AVOVYFCDODUXLY-HSJNEKGZSA-I</p>
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        <annotation>
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      <species metaid="M_PHYTOENE_c" id="M_PHYTOENE_c" name="PHYTOENE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H64">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 544.9362</p>
            <p>smiles: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C\C=C\C=C(/C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C</p>
            <p>inchikey: YVLPJIGOMTXXLP-KEKOKYSKSA-N</p>
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        <annotation>
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            <rdf:Description rdf:about="#M_PHYTOENE_c">
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      <species metaid="M_CPD1F__45__114_c" id="M_CPD1F__45__114_c" name="all-trans-lycopene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 536.8726</p>
            <p>smiles: CC(C)=CCC\C(C)=C\C=C\C(\C)=C\C=C\C(\C)=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\C=C(/C)CCC=C(C)C</p>
            <p>inchikey: OAIJSZIZWZSQBC-GYZMGTAESA-N</p>
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        <annotation>
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      <species metaid="M_CPD1F__45__118_c" id="M_CPD1F__45__118_c" name="&amp;alpha;-carotene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 536.8726</p>
            <p>smiles: C\C(\C=C\C=C(/C)\C=C\C1C(C)=CCCC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1=C(C)CCCC1(C)C</p>
            <p>inchikey: ANVAOWXLWRTKGA-JLTXGRSLSA-N</p>
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      <species metaid="M_CPD1F__45__126_c" id="M_CPD1F__45__126_c" name="&amp;gamma;-carotene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 536.8726</p>
            <p>smiles: CC(C)=CCC\C(C)=C\C=C\C(\C)=C\C=C\C(\C)=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\C1=C(C)CCCC1(C)C</p>
            <p>inchikey: HRQKOYFGHJYEFS-BXOLYSJBSA-N</p>
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        </annotation>
      </species>
      <species metaid="M_CPD1F__45__129_c" id="M_CPD1F__45__129_c" name="&amp;beta;-carotene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H56">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 536.8726</p>
            <p>smiles: C\C(\C=C\C=C(/C)\C=C\C1=C(C)CCCC1(C)C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C1=C(C)CCCC1(C)C</p>
            <p>inchikey: OENHQHLEOONYIE-JLTXGRSLSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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      <species metaid="M_CPD0__45__2472_c" id="M_CPD0__45__2472_c" name="(R)-NADHX" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H29N7O15P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 681.4415</p>
            <p>smiles: NC(=O)C1=CN([C@@H]2O[C@H](COP([O-])(=O)OP([O-])(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n3cnc4c(N)ncnc34)[C@@H](O)[C@H]2O)[C@H](O)CC1</p>
            <p>inchikey: IDBZKGQRLBFUFQ-MTKBYBFRSA-L</p>
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        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 151.1399</p>
            <p>smiles: Oc1ccccc1CC([O-])=O</p>
            <p>inchikey: CCVYRRGZDBSHFU-UHFFFAOYSA-M</p>
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        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__11495_c">
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      <species metaid="M_CPD__45__13793_c" id="M_CPD__45__13793_c" name="3-oxo-24-ethyl-cholest-5-ene" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H48O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 412.6908</p>
            <p>smiles: [H][C@@](CC)(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])CC=C4CC(=O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)C(C)C</p>
            <p>inchikey: KYOFIJXMVNQYFC-XJZKHKOHSA-N</p>
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      <species metaid="M_CPD__45__13907_c" id="M_CPD__45__13907_c" name="dehydroascorbate (bicyclic form)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 192.1235</p>
            <p>smiles: [H][C@]1(O)CO[C@@]2(O)[C@]1([H])OC(=O)C2(O)O</p>
            <p>inchikey: QPPOKIPSRPKDEM-VPGXFDHMSA-N</p>
          </body>
        </notes>
        <annotation>
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      <species metaid="M_CPD__45__334_c" id="M_CPD__45__334_c" name="2,3-dioxo-L-gulonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H7O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 191.1161</p>
            <p>smiles: OC[C@H](O)[C@@H](O)C(=O)C(=O)C([O-])=O</p>
            <p>inchikey: GJQWCDSAOUMKSE-STHAYSLISA-M</p>
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        <annotation>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 645.705</p>
            <p>smiles: [NH3+]C(CCC([O-])=[NH+]C(CSSSCC([NH+]=C([O-])CCC([NH3+])C([O-])=O)C([O-])=[NH+]CC([O-])=O)C(O)[NH2+]CC([O-])=O)C([O-])=O</p>
            <p>inchikey: IMZRQZICOZIGNP-UHFFFAOYSA-M</p>
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                </rdf:Bag>
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      <species metaid="M_CPD__45__13914_c" id="M_CPD__45__13914_c" name="cyclic-2,3-O-oxalyl-L-threonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H5O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 189.1002</p>
            <p>smiles: OCC1OC(=O)C(=O)OC1C([O-])=O</p>
            <p>inchikey: NKBSFRFTBUHMJF-UHFFFAOYSA-M</p>
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        <annotation>
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      <species metaid="M_CPD__45__13913_c" id="M_CPD__45__13913_c" name="2-carboxy-L-xylonolactone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H7O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 191.1161</p>
            <p>smiles: OCC1OC(=O)C(O)(C1O)C([O-])=O</p>
            <p>inchikey: ZNJUNWARRIXWAA-UHFFFAOYSA-M</p>
          </body>
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        <annotation>
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      <species metaid="M_CPD__45__11878_c" id="M_CPD__45__11878_c" name="3,4-dihydroxyphenylglycol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H10O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 170.1626</p>
            <p>smiles: OCC(O)c1ccc(O)c(O)c1</p>
            <p>inchikey: MTVWFVDWRVYDOR-UHFFFAOYSA-N</p>
          </body>
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        <annotation>
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            <rdf:Description rdf:about="#M_CPD__45__11878_c">
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      <species metaid="M_CPD__45__13912_c" id="M_CPD__45__13912_c" name="2-carboxy-L-threo-pentonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H8O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 208.124</p>
            <p>smiles: OCC(O)C(O)C(O)(C([O-])=O)C([O-])=O</p>
            <p>inchikey: CQIRJDZGDXTXKF-UHFFFAOYSA-L</p>
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        <annotation>
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      <species metaid="M_DIHYDROXYPHENYLGLYCOLALDEHYDE_c" id="M_DIHYDROXYPHENYLGLYCOLALDEHYDE_c" name="3,4-dihydroxyphenylglycolaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H8O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 168.1467</p>
            <p>smiles: [H]C(=O)C(O)c1ccc(O)c(O)c1</p>
            <p>inchikey: YUGMCLJIWGEKCK-UHFFFAOYSA-N</p>
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            <rdf:Description rdf:about="#M_DIHYDROXYPHENYLGLYCOLALDEHYDE_c">
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      <species metaid="M_CPD__45__13910_c" id="M_CPD__45__13910_c" name="cyclic- 3,4-O-oxalyl-L-threonate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H5O7">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 189.1002</p>
            <p>smiles: OC(C1COC(=O)C(=O)O1)C([O-])=O</p>
            <p>inchikey: FTDFTFXOJYXVTH-UHFFFAOYSA-M</p>
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            <p>mass: 1431.3098</p>
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        <notes>
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        </notes>
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      <species metaid="M_N__45__ACETYL__45__BETA__45__D__45__GLUCOSAMINYL__45__16__45__ETCETERA_c" id="M_N__45__ACETYL__45__BETA__45__D__45__GLUCOSAMINYL__45__16__45__ETCETERA_c" name="N-ACETYL-BETA-D-GLUCOSAMINYL-16-ETCETERA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_ALPHA__45__D__45__GALACTOSYL__45__ETCETERA__45__GLUCOSAMINYL_c" id="M_ALPHA__45__D__45__GALACTOSYL__45__ETCETERA__45__GLUCOSAMINYL_c" name="an &amp;alpha;-D-galactosyl-(1,3)-&amp;beta;-D-galactosyl-(1,4)-N-acetyl-D-glucosaminyl-R" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H34NO15R">
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        <notes>
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            <p>mass: 1241.3282</p>
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        <notes>
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            <p>mass: 1579.5818</p>
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        <notes>
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            <p>mass: 151.1261</p>
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            <p>mass: 255.246</p>
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      <species metaid="M_NIACINE_c" id="M_NIACINE_c" name="nicotinate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H4NO2">
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            <p>mass: 122.102</p>
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            <p>mass: 183.1387</p>
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      <species metaid="M_MANNOSE_c" id="M_MANNOSE_c" name="D-mannose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
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            <p>mass: 180.1559</p>
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            <p>inchikey: WQZGKKKJIJFFOK-QTVWNMPRSA-N</p>
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        </notes>
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      <species metaid="M_CPD__45__11876_c" id="M_CPD__45__11876_c" name="3-methoxy-4-hydroxyphenylglycolaldehyde" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H10O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 182.1733</p>
            <p>smiles: COc1cc(ccc1O)C(O)C=O</p>
            <p>inchikey: VISAJVAPYPFKCL-UHFFFAOYSA-N</p>
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        </notes>
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      <species metaid="M_VANILLYL_MANDELATE_c" id="M_VANILLYL_MANDELATE_c" name="vanillyl mandelate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C9H9O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 197.1653</p>
            <p>smiles: COc1cc(ccc1O)C(O)C([O-])=O</p>
            <p>inchikey: CGQCWMIAEPEHNQ-UHFFFAOYSA-M</p>
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            <rdf:Description rdf:about="#M_VANILLYL_MANDELATE_c">
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      <species metaid="M_SINAPATE_c" id="M_SINAPATE_c" name="sinapate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C11H11O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 223.2026</p>
            <p>smiles: COc1cc(\C=C\C([O-])=O)cc(OC)c1O</p>
            <p>inchikey: PCMORTLOPMLEFB-ONEGZZNKSA-M</p>
          </body>
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            <rdf:Description rdf:about="#M_SINAPATE_c">
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 315.4271</p>
            <p>smiles: [H][C@@]12C[C@]3(CC1=C)[C@@H](C=O)[C@@]1([H])[C@@](C)(CCC[C@@]1(C)C([O-])=O)[C@]3([H])CC2</p>
            <p>inchikey: ZCTUNYRXJKLWPY-LLCOKINKSA-M</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 330.4191</p>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 346.4185</p>
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      <species metaid="M_CPD1F__45__120_c" id="M_CPD1F__45__120_c" name="gibberellin A24" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C20H24O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 344.4027</p>
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      <species metaid="M_24__45__26__45__N__45__linked__45__Glycan_c" id="M_24__45__26__45__N__45__linked__45__Glycan_c" name="a {&amp;beta;-D-GlcNAc-(1&amp;rarr;2)-[&amp;beta;-D-GlcNAc-(1&amp;rarr;4)]-&amp;alpha;-D-Man-(1&amp;rarr;3)-[&amp;beta;-D-GlcNAc-(1&amp;rarr;2)-[&amp;beta;-D-GlcNAc-(1&amp;rarr;6)]-&amp;alpha;-D-Man-(1&amp;rarr;6)]-&amp;beta;-D-Man-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc-(1&amp;rarr;4)-&amp;beta;-D-GlcNAc}-N-Asn-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C70H114N8O48R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO[C@H]4O[C@H](CO[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5NC(C)=O)[C@@H](O)[C@H](O)[C@@H]4O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4NC(C)=O)[C@@H](O)[C@H](O[C@H]4O[C@H](CO)[C@@H](O[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5NC(C)=O)[C@H](O)[C@@H]4O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4NC(C)=O)[C@@H]3O)[C@H](O)[C@H]2NC(C)=O)[C@@H](CO)O[C@H]1NC(=O)C[C@H](N*)C(=O)O*</p>
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      <species metaid="M_24__45__246__45__N__45__linked__45__Glycan_c" id="M_24__45__246__45__N__45__linked__45__Glycan_c" name="24-246-N-linked-Glycan" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C78H127N9O53R2">
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            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO[C@H]4O[C@H](CO[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5NC(C)=O)[C@@H](O[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5NC(C)=O)[C@H](O)[C@@H]4O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4NC(C)=O)[C@@H](O)[C@H](O[C@H]4O[C@H](CO)[C@@H](O[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5NC(C)=O)[C@H](O)[C@@H]4O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4NC(C)=O)[C@@H]3O)[C@H](O)[C@H]2NC(C)=O)[C@@H](CO)O[C@H]1NC(=O)C[C@H](N*)C(=O)O*</p>
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      <species metaid="M_3__45__HYDROXY__45__DOCOSAPENTAENOYL__45__ACP_c" id="M_3__45__HYDROXY__45__DOCOSAPENTAENOYL__45__ACP_c" name="a (3R,7Z,10Z,13Z,16Z,19Z)-3-hydroxydocosa-7,10,13,16,19-pentaenoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
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          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_Oxidized__45__Flavoproteins_c" id="M_Oxidized__45__Flavoproteins_c" name="an [oxidized flavoprotein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
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      <species metaid="M_CO__43__2_c" id="M_CO__43__2_c" name="CO+2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Co">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 58.9321</p>
            <p>smiles: [Co++]</p>
            <p>inchikey: XLJKHNWPARRRJB-UHFFFAOYSA-N</p>
          </body>
        </notes>
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            <rdf:Description rdf:about="#M_CO__43__2_c">
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      <species metaid="M_COB__45__I__45__ALAMIN_c" id="M_COB__45__I__45__ALAMIN_c" name="cob(I)alamin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C62H88CoN13O14P">
        <notes>
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            <p>mass: 1329.3483</p>
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      <species metaid="M_CPD__45__315_c" id="M_CPD__45__315_c" name="cyanocob(III)alamin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C63H88CoN14O14P">
        <notes>
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            <p>mass: 1355.3652</p>
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            <p>inchikey: RMRCNWBMXRMIRW-WZHZPDAFSA-L</p>
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        </notes>
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              <bqbiol:isVersionOf>
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      </species>
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        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 182.0696</p>
            <p>smiles: CC(=O)C(O)COP([O-])([O-])=O</p>
            <p>inchikey: OKYHYXLCTGGOLM-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_DIHYDROXY__45__BUTANONE__45__P_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_CPD0__45__1718_c" id="M_CPD0__45__1718_c" name="7,8-dihydropterin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__16458_c" id="M_CPD__45__16458_c" name="7,8-dihydrolumazine" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H6N4O2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 166.1374</p>
            <p>smiles: O=c1[nH]c2NCC=Nc2c(=O)[nH]1</p>
            <p>inchikey: MYJNEEHZESREMO-UHFFFAOYSA-N</p>
          </body>
        </notes>
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      <species metaid="M_BETA__45__D__45__GALACTOSYL__45__ETCETERA__45__GLUCOSAMINE_c" id="M_BETA__45__D__45__GALACTOSYL__45__ETCETERA__45__GLUCOSAMINE_c" name="BETA-D-GALACTOSYL-ETCETERA-GLUCOSAMINE" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H25NO11">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 383.3484</p>
            <p>smiles: CC(=O)N[C@H]1C(O)O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@@H]1O</p>
            <p>inchikey: KFEUJDWYNGMDBV-RPHKZZMBSA-N</p>
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        </notes>
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            <rdf:Description rdf:about="#M_BETA__45__D__45__GALACTOSYL__45__ETCETERA__45__GLUCOSAMINE_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_CPD__45__16475_c" id="M_CPD__45__16475_c" name="CPD-16475" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H35NO15">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 529.4896</p>
            <p>smiles: C[C@@H]1O[C@@H](O[C@@H]2[C@@H](NC(C)=O)C(O)O[C@H](CO)[C@H]2O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@H](O)[C@@H]1O</p>
            <p>inchikey: HBBOZFUQJDYASD-QGTNPELVSA-N</p>
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        </notes>
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                </rdf:Bag>
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      <species metaid="M_CPD__45__16483_c" id="M_CPD__45__16483_c" name="an N-acetyl-&amp;alpha;-neuraminyl-(2&amp;rarr;6)-&amp;beta;-D-galactosyl-(1&amp;rarr;4)-N-acetyl-&amp;beta;-D-glucosaminyl-R" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C25H40N2O19R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: [H][C@]1(O[C@](C[C@H](O)[C@H]1NC(C)=O)(OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](NC(C)=O)[C@H](O[*])O[C@@H]2CO)[C@H](O)[C@@H](O)[C@H]1O)C([O-])=O)[C@H](O)[C@H](O)CO</p>
          </body>
        </notes>
      </species>
      <species metaid="M_i__45__Antigens_c" id="M_i__45__Antigens_c" name="an i antigen" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H70N3O31R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@H](CO[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)[C@H](O)[C@H]3NC(C)=O)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)[C@H](O)[C@H]3NC(C)=O)[C@H]2O)[C@@H](CO)O[C@H]1O[*]</p>
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        </notes>
      </species>
      <species metaid="M_I__45__antigens_c" id="M_I__45__antigens_c" name="an I antigen" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H70N3O31R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@H](CO[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)[C@H](O)[C@H]3NC(C)=O)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)[C@H](O)[C@H]3NC(C)=O)[C@H]2O)[C@@H](CO)O[C@H]1O[*]</p>
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        </notes>
      </species>
      <species metaid="M_CU__43___c" id="M_CU__43___c" name="CU+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="1" fbc:chemicalFormula="Cu">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 63.545</p>
            <p>smiles: [Cu+]</p>
            <p>inchikey: VMQMZMRVKUZKQL-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CU__43___c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Cu/q+1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__3061_c" id="M_CPD__45__3061_c" name="(2S)-liquiritigenin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H12O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 256.2534</p>
            <p>smiles: Oc1ccc(cc1)C1CC(=O)c2ccc(O)cc2O1</p>
            <p>inchikey: FURUXTVZLHCCNA-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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      <species metaid="M_CU__43__2_c" id="M_CU__43__2_c" name="CU+2" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Cu">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 63.545</p>
            <p>smiles: [Cu++]</p>
            <p>inchikey: JPVYNHNXODAKFH-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_CU__43__2_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Cu/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_D__45__MYO__45__INOSITOL__45__34__45__BISPHOSPHATE_c" id="M_D__45__MYO__45__INOSITOL__45__34__45__BISPHOSPHATE_c" name="D-myo-inositol (3,4)-bisphosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 336.0861</p>
            <p>smiles: O[C@H]1[C@H](O)[C@@H](O)[C@H](OP([O-])([O-])=O)[C@@H](OP([O-])([O-])=O)[C@H]1O</p>
            <p>inchikey: MCKAJXMRULSUKI-CNWJWELYSA-J</p>
          </body>
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            <rdf:Description rdf:about="#M_D__45__MYO__45__INOSITOL__45__34__45__BISPHOSPHATE_c">
              <bqbiol:isVersionOf>
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                </rdf:Bag>
              </bqbiol:isVersionOf>
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        </annotation>
      </species>
      <species metaid="M_EDTA_c" id="M_EDTA_c" name="EDTA" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H14N2O8">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 290.2279</p>
            <p>smiles: [O-]C(=O)C[NH+](CC[NH+](CC([O-])=O)CC([O-])=O)CC([O-])=O</p>
            <p>inchikey: KCXVZYZYPLLWCC-UHFFFAOYSA-L</p>
          </body>
        </notes>
        <annotation>
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            <rdf:Description rdf:about="#M_EDTA_c">
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                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_L__45__CANALINE_c" id="M_L__45__CANALINE_c" name="L-canaline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H10N2O3">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 134.1338</p>
            <p>smiles: [H][C@]([NH3+])(CCON)C([O-])=O</p>
            <p>inchikey: FQPGMQABJNQLLF-VKHMYHEASA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_L__45__CANALINE_c">
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      </species>
      <species metaid="M_Myo__45__inositol__45__monophosphates_c" id="M_Myo__45__inositol__45__monophosphates_c" name="a myo-inositol monophosphate" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__10332_c" id="M_CPD__45__10332_c" name="gibberellin44 (open lactone form)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C20H26O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 362.4179</p>
            <p>smiles: [H][C@@]12CC[C@]3(O)C[C@]1(CC3=C)[C@@H](C([O-])=O)[C@@]1([H])[C@@]2(CO)CCC[C@@]1(C)C([O-])=O</p>
            <p>inchikey: AXEUUXHMKSPQAI-YTJHIPEWSA-L</p>
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        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__10332_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H28O6/c1-11-8-19-9-20(11,26)7-4-12(19)18(10-21)6-3-5-17(2,16(24)25)14(18)13(19)15(22)23/h12-14,21,26H,1,3-10H2,2H3,(H,22,23)(H,24,25)/p-2/t12-,13+,14+,17+,18+,19-,20-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD__45__695_c" id="M_CPD__45__695_c" name="gibberellin A53" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C20H26O5">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 346.4185</p>
            <p>smiles: [H][C@@]12CC[C@]3(O)C[C@]1(CC3=C)[C@@H](C([O-])=O)[C@@]1([H])[C@@]2(C)CCC[C@@]1(C)C([O-])=O</p>
            <p>inchikey: CZEMYYICWZPENF-VOLTXKGXSA-L</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__695_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C20H28O5/c1-11-9-19-10-20(11,25)8-5-12(19)17(2)6-4-7-18(3,16(23)24)14(17)13(19)15(21)22/h12-14,25H,1,4-10H2,2-3H3,(H,21,22)(H,23,24)/p-2/t12-,13+,14-,17-,18+,19-,20-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MG__43__2_c" id="M_MG__43__2_c" name="Mg2+" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="2" fbc:chemicalFormula="Mg">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 24.304</p>
            <p>smiles: [Mg++]</p>
            <p>inchikey: JLVVSXFLKOJNIY-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MG__43__2_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/Mg/q+2"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_MG__45__PROTOPORPHYRIN_c" id="M_MG__45__PROTOPORPHYRIN_c" name="Mg-protoporphyrin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C34H30MgN4O4">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 582.932</p>
            <p>smiles: CC1=C(CCC([O-])=O)C2=N\C\1=C/c1c(C)c(C=C)c3\C=C4/N=C(/C=c5/c(C)c(CCC([O-])=O)\c(=C\2)n5[Mg]n13)C(C=C)=C4C</p>
            <p>inchikey: REJJDEGSUOCEEW-RGGAHWMASA-J</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_MG__45__PROTOPORPHYRIN_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C34H34N4O4.Mg/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-4/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_CPD1F__45__453_c" id="M_CPD1F__45__453_c" name="kaempferol 3-O-&amp;beta;-D-glucoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H19O11">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 447.3695</p>
            <p>smiles: OC[C@H]1O[C@@H](Oc2c(oc3cc([O-])cc(O)c3c2=O)-c2ccc(O)cc2)[C@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: JPUKWEQWGBDDQB-QSOFNFLRSA-M</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD1F__45__453_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C21H20O11/c22-7-13-15(26)17(28)18(29)21(31-13)32-20-16(27)14-11(25)5-10(24)6-12(14)30-19(20)8-1-3-9(23)4-2-8/h1-6,13,15,17-18,21-26,28-29H,7H2/p-1/t13-,15-,17+,18-,21+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_S__45__1__45__PHENYLETHANOL_c" id="M_S__45__1__45__PHENYLETHANOL_c" name="(S)-1-phenylethanol" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H10O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 122.1644</p>
            <p>smiles: C[C@H](O)c1ccccc1</p>
            <p>inchikey: WAPNOHKVXSQRPX-ZETCQYMHSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_S__45__1__45__PHENYLETHANOL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H10O/c1-7(9)8-5-3-2-4-6-8/h2-7,9H,1H3/t7-/m0/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_PHENYL_c" id="M_PHENYL_c" name="acetophenone" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H8O">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 120.1485</p>
            <p>smiles: CC(=O)c1ccccc1</p>
            <p>inchikey: KWOLFJPFCHCOCG-UHFFFAOYSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_PHENYL_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C8H8O/c1-7(9)8-5-3-2-4-6-8/h2-6H,1H3"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_GlcA__45__GlcNAc__45__GlcA__45__Gal__45__Gal__45__Xyl__45__Protein_c" id="M_GlcA__45__GlcNAc__45__GlcA__45__Gal__45__Gal__45__Xyl__45__Protein_c" name="a 3-O-[&amp;beta;-D-GlcA-(1&amp;rarr;3)-&amp;alpha;-D-GlcNAc-(1&amp;rarr;4)-&amp;beta;-D-GlcA-(1&amp;rarr;3)-&amp;beta;-D-Gal-(1&amp;rarr;3)-&amp;beta;-D-Gal-(1&amp;rarr;4)-&amp;beta;-D-Xyl]-L-seryl-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C40H60N2O33R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@@H]([C@@H](O)[C@H](O)[C@H]2O)C([O-])=O)[C@@H](CO)O[C@@H]1O[C@H]1[C@H](O)[C@@H](O)[C@H](O[C@H]2[C@@H](O)[C@@H](CO)O[C@@H](O[C@H]3[C@@H](O)[C@@H](CO)O[C@@H](O[C@@H]4CO[C@@H](OC[C@H](N*)C(*)=O)[C@H](O)[C@H]4O)[C@@H]3O)[C@@H]2O)O[C@@H]1C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_GlcNAc__45__GlcA__45__GlcNAc__45__GlcA__45__Gal__45__Gal__45__Xyl__45__Core_c" id="M_GlcNAc__45__GlcA__45__GlcNAc__45__GlcA__45__Gal__45__Gal__45__Xyl__45__Core_c" name="a 3-O-[&amp;alpha;-D-GlcNAc-(1&amp;rarr;4)-&amp;beta;-D-GlcA-(1&amp;rarr;3)-&amp;alpha;-D-GlcNAc-(1&amp;rarr;4)-&amp;beta;-D-GlcA-(1&amp;rarr;3)-&amp;beta;-D-Gal-(1&amp;rarr;3)-&amp;beta;-D-Gal-(1&amp;rarr;4)-&amp;beta;-D-Xyl]-L-seryl-[protein]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="-2" fbc:chemicalFormula="C48H73N3O38R2">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1O[C@H]1[C@H](O)[C@@H](O)[C@H](O[C@H]2[C@H](O)[C@@H](NC(C)=O)[C@@H](O[C@H]3[C@H](O)[C@@H](O)[C@H](O[C@H]4[C@@H](O)[C@@H](CO)O[C@@H](O[C@H]5[C@@H](O)[C@@H](CO)O[C@@H](O[C@@H]6CO[C@@H](OC[C@H](N*)C(*)=O)[C@H](O)[C@H]6O)[C@@H]5O)[C@@H]4O)O[C@@H]3C([O-])=O)O[C@@H]2CO)O[C@@H]1C([O-])=O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_CPD__45__6242_c" id="M_CPD__45__6242_c" name="a protein-O-(N-acetyl-D-glucosaminyl)-trans-4-hydroxy-L-proline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_CPD__45__13559_c" id="M_CPD__45__13559_c" name="&amp;alpha;-D-mannopyranose" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>mass: 180.1559</p>
            <p>smiles: OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O</p>
            <p>inchikey: WQZGKKKJIJFFOK-PQMKYFCFSA-N</p>
          </body>
        </notes>
        <annotation>
          <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:vCard4="http://www.w3.org/2006/vcard/ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/">
            <rdf:Description rdf:about="#M_CPD__45__13559_c">
              <bqbiol:isVersionOf>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/inchi/InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1"/>
                </rdf:Bag>
              </bqbiol:isVersionOf>
            </rdf:Description>
          </rdf:RDF>
        </annotation>
      </species>
      <species metaid="M_Protein__45__hydroxyprolines_c" id="M_Protein__45__hydroxyprolines_c" name="a [protein]-trans-4-hydroxy-L-proline" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Man8GlcNAc2__45__protein__45__A123B13_c" id="M_Man8GlcNAc2__45__protein__45__A123B13_c" name="Man8GlcNAc2-[protein] (isomer 8A1,2,3B1,3)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_CHITIN_c" id="M_CHITIN_c" name="chitin" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Man__45__16__45__Man8GlcNAc2__45__proteins_c" id="M_Man__45__16__45__Man8GlcNAc2__45__proteins_c" name="Man9GlcNAc2-[protein]  (isomer 8A1,2,3,4B1,4)" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_BETA__45__ACETYLGLUCOSAMINIDE_c" id="M_BETA__45__ACETYLGLUCOSAMINIDE_c" name="an N-acetyl-&amp;beta;-D-glucosaminyl-R" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14NO6R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1O[*]</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Beta__45__D__45__Galactosides_c" id="M_Beta__45__D__45__Galactosides_c" name="a &amp;beta;-D-galactoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O6R">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>smiles: OC[C@H]1O[C@@H](O[*])[C@H](O)[C@@H](O)[C@H]1O</p>
          </body>
        </notes>
      </species>
      <species metaid="M_Alpha__45__D__45__Mannosides_c" id="M_Alpha__45__D__45__Mannosides_c" name="an &amp;alpha;-D-mannoside" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Oxidized__45__Disulfide__45__Carrier__45__Proteins_c" id="M_Oxidized__45__Disulfide__45__Carrier__45__Proteins_c" name="a [disulfide-bond carrier protein] carrying a disulfide bond" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Protein__45__Red__45__Disulfides_c" id="M_Protein__45__Red__45__Disulfides_c" name="a protein with reduced L-cysteine residues" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_Reduced__45__Disulfide__45__Carrier__45__Proteins_c" id="M_Reduced__45__Disulfide__45__Carrier__45__Proteins_c" name="a [disulfide-bond carrier protein] with reduced L-cysteine residues" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species metaid="M_Protein__45__Ox__45__Disulfides_c" id="M_Protein__45__Ox__45__Disulfides_c" name="a protein with a disulfide bond" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
      <species metaid="M_R__45__3__45__hydroxydodecanoyl__45__ACPs_c" id="M_R__45__3__45__hydroxydodecanoyl__45__ACPs_c" name="a (3R)-3-hydroxydodecanoyl-[acp]" compartment="c" initialAmount="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false" fbc:charge="0">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml"/>
        </notes>
      </species>
    </listOfSpecies>
    <listOfReactions>
      <reaction id="R_1__45__PHOSPHATIDYLINOSITOL__45__3__45__KINASE__45__RXN" name="phosphatidylinositol 3-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15524) or (E_subulatus_17191) or (E_subulatus_11533) or (E_subulatus_15525)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6352</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__1__45__phosphatidyl__45__inositols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__177_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__45__PHOSPHATIDYLINOSITOL__45__KINASE__45__RXN" name="1-phosphatidylinositol 4-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03296) or (E_subulatus_11382) or (E_subulatus_00708) or (E_subulatus_00709) or (E_subulatus_11383) or (E_subulatus_21184) or (E_subulatus_21185) or (E_subulatus_21732) or (E_subulatus_21183) or (E_subulatus_21877) or (E_subulatus_21733) or (E_subulatus_21186)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6352 , PWY-6351</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__1__45__phosphatidyl__45__inositols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__1108_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__1__46__1__46__145__45__RXN" name="3-beta-hydroxy-delta5-steroid dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01313) or (E_subulatus_11841)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3b__45__hydroxy__45__D5__45__steroids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__D5__45__steroids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__1__46__1__46__178__45__RXN" name="1.1.1.178-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5109 , ILEUDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__METHYL__45__3__45__HYDROXY__45__BUTYRYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__METHYL__45__ACETO__45__ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__1__46__1__46__211__45__RXN" name="1.1.1.211-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Long__45__Chain__45__3S__45__Hydroxyacyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Long__45__Chain__45__oxoacyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__1__46__1__46__255__45__RXN" name="1.1.1.255-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-3861</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MANNITOL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15373_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__1__46__1__46__271__45__RXN" name="GDP-L-fucose synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01075) or (E_subulatus_07774) or (E_subulatus_07773) or (E_subulatus_19816)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP__45__4__45__DEHYDRO__45__6__45__DEOXY__45__D__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13118_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__1__46__1__46__34__45__RXN" name="hydroxymethylglutaryl-CoA reductase (NADPH)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16755) or (E_subulatus_21172) or (E_subulatus_21173) or (E_subulatus_21174) or (E_subulatus_16754)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7391 , PWY-7524 , PWY-922 , PWY-6174</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MEVALONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_3__45__HYDROXY__45__3__45__METHYL__45__GLUTARYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__1__46__1__46__39__45__RXN" name="malate dehydrogenase, NAD-requiring" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23248) or (E_subulatus_23246) or (E_subulatus_23247) or (E_subulatus_23250) or (E_subulatus_23249)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7384 , PWY-7686 , PWY-7115 , PWY-3641 , GLUCONEO-PWY , PWY-7118</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__1__46__1__46__8__45__RXN" name="glycerol 3-phosphate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11786) or (E_subulatus_04109) or (E_subulatus_07294) or (E_subulatus_06480) or (E_subulatus_06478) or (E_subulatus_04110) or (E_subulatus_06481) or (E_subulatus_04111) or (E_subulatus_07295) or (E_subulatus_06479) or (E_subulatus_11787) or (E_subulatus_19994)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7385 , PWY-6118 , PWY-7411</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__1__46__3__46__37__45__RXN" name="D-arabinono-1,4-lactone oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25123) or (E_subulatus_25119) or (E_subulatus_03370) or (E_subulatus_03371) or (E_subulatus_25120) or (E_subulatus_25121) or (E_subulatus_03372) or (E_subulatus_25122)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY3O-6</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__356_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1789_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__10__46__2__46__2__45__RXN" name="ubiquinol-cytochrome-c reductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09489) or (E_subulatus_00265) or (E_subulatus_07623) or (E_subulatus_09490) or (E_subulatus_09492) or (E_subulatus_09491) or (E_subulatus_07624) or (E_subulatus_22247)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7279 , PWY-7082 , PWY-3781</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Oxidized_e" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Reduced_e" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__11__46__1__46__12__45__RXN" name="glutathione peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18548) or (E_subulatus_18794) or (E_subulatus_18793) or (E_subulatus_18549)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4081</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_A__45__LIPID__45__HYDROPEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXIDIZED__45__GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Lipid__45__hydroxy__45__fatty__45__acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__11__46__1__46__15__45__RXN" name="peroxiredoxin" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08800) or (E_subulatus_08799) or (E_subulatus_18794) or (E_subulatus_21611) or (E_subulatus_18793) or (E_subulatus_18334) or (E_subulatus_20829) or (E_subulatus_08798) or (E_subulatus_17339)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Alkyl__45__Hydro__45__Peroxides_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Alcohols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__14__46__11__46__2__45__RXN" name="prolyl 4-hydroxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16980) or (E_subulatus_16981) or (E_subulatus_17536) or (E_subulatus_02339) or (E_subulatus_16982) or (E_subulatus_17537)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7894</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROCOLLAGEN__45__L__45__PROLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__6321_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__14__46__13__46__79__45__RXN" name="ent-kaurenoate monooxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5034 , PWY-5047</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__132_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__136_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__14__46__13__46__8__45__RXN" name="dimethylaniline monooxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08772) or (E_subulatus_08190) or (E_subulatus_13714) or (E_subulatus_13715) or (E_subulatus_13711) or (E_subulatus_08189) or (E_subulatus_18753) or (E_subulatus_18754) or (E_subulatus_13440) or (E_subulatus_08188) or (E_subulatus_13713) or (E_subulatus_13182) or (E_subulatus_13183) or (E_subulatus_12999) or (E_subulatus_13181) or (E_subulatus_21060) or (E_subulatus_17574) or (E_subulatus_13712)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NN__45__DIMETHYLANILINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NN__45__DIMETHYLANILINE__45__N__45__OXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__14__46__19__46__1__45__RXN" name="stearoyl-CoA 9-desaturase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08000) or (E_subulatus_05429) or (E_subulatus_08001) or (E_subulatus_17810) or (E_subulatus_05430) or (E_subulatus_08002) or (E_subulatus_05431) or (E_subulatus_17811)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5996</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_STEAROYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__14__46__99__46__33__45__RXN" name="linoleate 12-acetylenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08000) or (E_subulatus_09174) or (E_subulatus_08001) or (E_subulatus_08133) or (E_subulatus_19800) or (E_subulatus_08002)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6013</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Linoleoyl__45__groups_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Glycerolipid__45__crepenynate_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__18__46__1__46__2__45__RXN" name="ferredoxin-NADP oxidoreductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16793) or (E_subulatus_05524) or (E_subulatus_18122) or (E_subulatus_05525)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Reduced__45__ferredoxins_e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADP_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_e" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Oxidized__45__ferredoxins_e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADPH_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__2__46__1__46__13__45__RXN" name="1.2.1.13-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: CALVIN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DPG_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__2__46__1__46__18__45__RXN" name="Malonate-semialdehyde dehydrogenase (acetylating)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25404)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONATE__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__2__46__1__46__2__45__RXN" name="1.2.1.2-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19981)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-1881 , PWY-6696 , PWY-5497 , P164-PWY , PWY-7985</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__2__46__1__46__25__45__RXN" name="3-methyl-2-oxobutanoate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14800)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: VALDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETO__45__ISOVALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ISOBUTYRYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__2__46__1__46__27__45__RXN" name="methylmalonate-semialdehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25404)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5642</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12179_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROPIONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__2__46__1__46__9__45__RXN" name="NADP-dependent glyceraldehyde-3-phosphate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21064) or (E_subulatus_21066) or (E_subulatus_21067) or (E_subulatus_21065)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1042</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_G3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__2__46__4__46__4__45__RXN" name="3-methyl-2-oxobutanoate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14800) or (E_subulatus_02028)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5046</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETO__45__ISOVALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__2MP__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__3__46__1__46__9__45__RXN" name="1.3.1.9-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft479_9a) or (EsuBft414_17a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TRANS__45__D2__45__ENOYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__3__46__7__46__4__45__RXN" name="1.3.7.4-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11501)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-7170</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BILIVERDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3Z__45__PHYTOCHROMOBILIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__3__46__99__46__23__45__RXN" name="all-trans-retinol 13,14-reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13524_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7247_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__5__46__1__46__15__45__RXN" name="1.5.1.15-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00189)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2201</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__10__45__METHENYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__5__46__1__46__20__45__RXN" name="methylenetetrahydrofolate reductase (NAD(P)H)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01980) or (E_subulatus_13632)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: CODH-PWY , PWY-3841 , 1CMET2-PWY , PWY-2201</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__METHYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__5__46__1__46__20__45__RXN__45__5__45__METHYL__45__THF__47__NAD__47____47__METHYLENE__45__THF__47__NADH__47__PROTON__46__44__46__" name="1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44." reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYLENE__45__THF_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__METHYL__45__THF_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__5__46__5__46__1__45__RXN" name="1.5.5.1-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft39_26a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__6__46__5__46__4__45__RXN" name="NADH-monodehydroascorbate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19684) or (E_subulatus_19683) or (E_subulatus_19682)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6370</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__318_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__8__46__1__46__4__45__RXN" name="protein N6-(dihydrolipoyl)lysine:NAD+ oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04353) or (E_subulatus_01830) or (E_subulatus_04354) or (E_subulatus_01831)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Dihydro__45__Lipoyl__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Lipoyl__45__Protein__45__N6__45__lipoyllysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__8__46__4__46__12__45__RXN" name="peptide-methionine (R)-S-oxide reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17022) or (E_subulatus_19733) or (E_subulatus_17020) or (E_subulatus_24880) or (E_subulatus_25063) or (E_subulatus_08565) or (E_subulatus_09541) or (E_subulatus_08564) or (E_subulatus_05074) or (E_subulatus_09035) or (E_subulatus_17021) or (E_subulatus_17019) or (E_subulatus_19734) or (E_subulatus_08566) or (E_subulatus_05073) or (E_subulatus_09036) or (E_subulatus_24879) or (E_subulatus_09037) or (E_subulatus_17023)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__L__45__methionine__45__R__45__S__45__oxides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__methionine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__8__46__4__46__13__45__RXN" name="methionine sulfoxide reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07115) or (E_subulatus_24342)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8989_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1__46__8__46__5__46__1__45__RXN" name="dehydroascorbate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17354) or (E_subulatus_01219) or (E_subulatus_15841) or (E_subulatus_15842) or (E_subulatus_15843)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6370 , PWY-2261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__DEHYDRO__45__ASCORBATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXIDIZED__45__GLUTATHIONE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_12__45__ALPHA__45__L__45__FUCOSIDASE__45__RXN" name="12-ALPHA-L-FUCOSIDASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12561) or (E_subulatus_04167) or (E_subulatus_04168)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__8198_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__Fucopyranoses_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHYL__45__BETA__45__D__45__GALACTOSIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_12__45__OXOPHYTODIENOATE__45__REDUCTASE__45__RXN" name="12-oxophytodienoate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24053)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__729_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__730_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_13__45__BETA__45__GLUCAN__45__SYNTHASE__45__RXN" name="callose synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17399) or (E_subulatus_17774) or (E_subulatus_24678) or (E_subulatus_20468) or (E_subulatus_20469) or (E_subulatus_02079) or (E_subulatus_17398) or (E_subulatus_20467) or (E_subulatus_24677) or (E_subulatus_19679)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6773</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__3__45__beta__45__D__45__Glucans_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__3__45__beta__45__D__45__Glucans_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_1TRANSKETO__45__RXN" name="transketolase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01924) or (E_subulatus_25188) or (E_subulatus_25187)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5723 , P124-PWY , P185-PWY , CALVIN-PWY , P21-PWY , PWY-1861 , NONOXIPENT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__SEDOHEPTULOSE__45__7__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RIBOSE__45__5P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_XYLULOSE__45__5__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__45__ISOPROPYLMALATESYN__45__RXN" name="2-isopropylmalate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15581) or (E_subulatus_15582)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6871 , LEUSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETO__45__ISOVALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__CARBOXY__45__3__45__HYDROXY__45__ISOCAPROATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__45__KETO__45__ADIPATE__45__DEHYDROG__45__RXN" name="2-KETO-ADIPATE-DEHYDROG-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17006) or (E_subulatus_01830) or (E_subulatus_04353)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY66-425 , LYSINE-DEG1-PWY , PWY-5652</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2K__45__ADIPATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTARYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__45__METHYLACYL__45__COA__45__DEHYDROGENASE__45__RXN" name="2-METHYLACYL-COA-DEHYDROGENASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5109 , ILEUDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__METHYL__45__BUTYRYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__1083_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__45__NITROPROPANE__45__DIOXYGENASE__45__RXN" name="nitronate monooxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10258)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-723</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__320_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NITRITE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Unspecified__45__Degradation__45__Products_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__100__45__RXN" name="protein-S-isoprenylcysteine O-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15985)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTEIN__45__C__45__TERMINAL__45__S__45__ETC__45__CYSTEINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTEIN__45__C__45__TERMINAL__45__S__45__FARNESYL__45__L__45__CYSTEINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__125__45__RXN" name="2.1.1.125-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft539_9a) or (EsuBft32_31a) or (EsuBft275_19a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Histone__45__L__45__arginines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Histone__45__N__45__o__45__methyl__45__arginines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__126__45__RXN" name="2.1.1.126-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft32_31a) or (EsuBft2601_3a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Myelin__45__L__45__arginines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Myelin__45__N__45__o__45__methyl__45__arginines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__135__45__RXN" name="methionine synthase reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16914) or (E_subulatus_10031)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7974</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Methionine__45__synthase__45__cob__45__II__45__alamins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_METHIONINE__45__SYNTHASE__45__METHYLCOBALAMIN_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__137__45__RXN" name="S-adenosyl-L-methionine:arsenite As-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21120)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4202</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__763_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_METHYLARSONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__138__45__RXN" name="methylarsonite methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03931) or (E_subulatus_03932) or (E_subulatus_03929) or (E_subulatus_21120) or (E_subulatus_03930)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4202</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHYLARSONITE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_DIMETHYLARSINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__19__45__RXN" name="2.1.1.19-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-2201</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__7670_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__METHYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TRIMETHYLSULFONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__34__45__RXN" name="tRNA (Gm18) 2&apos;-O-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18777)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_tRNA__45__guanosine18_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__O__45__Methylguanosine18_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__57__45__RXN" name="cap1 methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23642)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7379</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_m7G5__45__pppR__45__mRNAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_m7G5__45__pppRm__45__mRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__63__45__RXN" name="methylated-DNA-[protein]-cysteine S-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12251)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DNA__45__6__45__O__45__Methyl__45__Guanines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROT__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DNA__45__Guanines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__S__45__methyl__45__L__45__cysteine_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__74__45__RXN" name="2.1.1.74-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10098) or (E_subulatus_10099)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Uracil__45__54__45__in__45__tRNA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FADH2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_tRNA__45__containing__45__5Me__45__uridine54_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__1__46__1__46__77__45__RXN" name="protein-L-isoaspartate (D-aspartate) O-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02157) or (E_subulatus_02159) or (E_subulatus_17874) or (E_subulatus_02158) or (E_subulatus_09946)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTEIN__45__L__45__BETA__45__ISOASPARTATES_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTEIN__45__L__45__BETA__45__ISOSPARTATE__45__METHYL__45__ESTERS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__3__46__1__46__155__45__RXN" name="2.3.1.155-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7656 , PWY-7654</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__OXOPALMITOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TETRADECANOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__3__46__1__46__168__45__RXN" name="dihydrolipoyllysine-residue (2-methylpropanoyl)transferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14800)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5046</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ISOBUTYRYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__2MP__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__3__46__1__46__176__45__RXN" name="2.3.1.176-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23204)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6061</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7257_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__202_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROPIONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__3__46__1__46__179__45__RXN" name="2.3.1.179-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5973</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Palmitoleoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__cis__45__vaccenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__3__46__1__46__23__45__RXN" name="1-acylglycerophosphocholine O-acyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6803 , PWY-7470</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__Lysophosphatidylcholines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHATIDYLCHOLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__3__46__1__46__41__45__RXN" name="&amp;beta;-ketoacyl [acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_B__45__KETOACYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__3__46__1__46__67__45__RXN" name="2.3.1.67-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__Alkyl__45__sn__45__glycero__45__3__45__phosphocholines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Alkyl__45__acetyl__45__glycero__45__phosphocholines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__3__46__2__46__13__45__RXN" name="2.3.2.13-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13631) or (E_subulatus_02339) or (E_subulatus_19753) or (E_subulatus_19754)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__L__45__glutamine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__N6__45__5__45__glutamyl__45__lysine__45__crosslinks_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__3__46__2__46__15__45__RXN" name="phytochelatin synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21795) or (E_subulatus_06213)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6745</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Poly__45__Gamma__45__Glutamylcysteine__45__Glycines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Poly__45__Gamma__45__Glutamylcysteine__45__Glycines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__101__45__RXN" name="&amp;alpha;-1,3-mannosyl-glycoprotein 2-&amp;beta;-N-acetylglucosaminyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07220) or (E_subulatus_03526) or (E_subulatus_13268) or (E_subulatus_13267) or (E_subulatus_14298) or (E_subulatus_07218) or (E_subulatus_03527) or (E_subulatus_10590) or (E_subulatus_10589) or (E_subulatus_23843) or (E_subulatus_12722) or (E_subulatus_14299) or (E_subulatus_14300) or (E_subulatus_10588) or (E_subulatus_12721) or (E_subulatus_22576) or (E_subulatus_09549) or (E_subulatus_10591) or (E_subulatus_07219) or (E_subulatus_22704) or (E_subulatus_23842) or (E_subulatus_11398) or (E_subulatus_22703) or (E_subulatus_09550)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7920 , PWY-7426</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Mannosyl5__45__N__45__Glycans_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Mannosyl5__45__N__45__acetyl__45__glucosamine2__45__R_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__117__45__RXN" name="UDP-glucose:dolichyl-phosphate glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21992)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__166_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__119__45__RXN" name="dolichyl-diphosphooligosaccharide-protein glycotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13517) or (E_subulatus_03437) or (E_subulatus_13518)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__18076_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__Asparagine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18077_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__224_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__141__45__RXN" name="2.4.1.141-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__190_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NN__45__DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__142__45__RXN" name="2.4.1.142-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NN__45__DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ALPHA__45__D__45__MANNOSYLCHITOBIO_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__143__45__RXN" name="2.4.1.143-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7426</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__2__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__144__45__RXN" name="2.4.1.144-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7426</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__2__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__4__45__2__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__145__45__RXN" name="2.4.1.145-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7426</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__2__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_24__45__2__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__149__45__RXN" name="2.4.1.149-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7434</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_B__45__Gal__45__14__45__NacGlc__45__R_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__BETA__45__D__45__GLUCOSAMINYL__45__13__45__ETCETERA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__150__45__RXN" name="2.4.1.150-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7434</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_B__45__Gal__45__14__45__NacGlc__45__R_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_N__45__ACETYL__45__BETA__45__D__45__GLUCOSAMINYL__45__16__45__ETCETERA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__151__45__RXN" name="galactosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03212) or (E_subulatus_05950) or (E_subulatus_20560) or (E_subulatus_01400) or (E_subulatus_22704) or (E_subulatus_20561) or (E_subulatus_23844) or (E_subulatus_22703) or (E_subulatus_20562) or (E_subulatus_01402) or (E_subulatus_01401)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7434</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14553_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_B__45__Gal__45__14__45__NacGlc__45__R_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ALPHA__45__D__45__GALACTOSYL__45__ETCETERA__45__GLUCOSAMINYL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__155__45__RXN" name="alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05914)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7426</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_24__45__2__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_24__45__26__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__198__45__RXN" name="phosphatidylinositol N-acetylglucosaminyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11418) or (E_subulatus_11133) or (E_subulatus_23365) or (E_subulatus_11134)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__phosphatidyl__45__inositols_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__452_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__201__45__RXN" name="2.4.1.201-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7426</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_24__45__26__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_24__45__246__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__224__45__RXN" name="N-acetylglucosaminyl-proteoglycan 4-&amp;beta;-glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08823) or (E_subulatus_04745) or (E_subulatus_04743) or (E_subulatus_04740) or (E_subulatus_20561) or (E_subulatus_03524) or (E_subulatus_20562) or (E_subulatus_18320) or (E_subulatus_04747) or (E_subulatus_05426) or (E_subulatus_25335) or (E_subulatus_04741) or (E_subulatus_20471) or (E_subulatus_04746) or (E_subulatus_04744) or (E_subulatus_08824) or (E_subulatus_05427) or (E_subulatus_25336) or (E_subulatus_04742) or (E_subulatus_01636) or (E_subulatus_20560) or (E_subulatus_20470) or (E_subulatus_23604) or (E_subulatus_23605)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6558</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GlcA__45__GlcNAc__45__GlcA__45__Gal__45__Gal__45__Xyl__45__Protein_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GlcNAc__45__GlcA__45__GlcNAc__45__GlcA__45__Gal__45__Gal__45__Xyl__45__Core_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__229__45__RXN" name="2.4.1.229-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24938) or (E_subulatus_25622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__hydroxyprolines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__6242_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__232__45__RXN" name="glycolipid 6-alpha-mannosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24765)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Man8GlcNAc2__45__protein__45__A123B13_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Man__45__16__45__Man8GlcNAc2__45__proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__38__45__RXN" name="&amp;beta;-N-acetylglucosaminylglycopeptide &amp;beta;-1,4-galactosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01584) or (E_subulatus_19464) or (E_subulatus_19465)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7434 , PWY-7837 , PWY-7833 , PWY-7831</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BETA__45__ACETYLGLUCOSAMINIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14553_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_B__45__Gal__45__14__45__NacGlc__45__R_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__46__45__RXN" name="monogalactosyldiacylglycerol synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10095) or (E_subulatus_09249) or (E_subulatus_16126) or (E_subulatus_16123) or (E_subulatus_16121) or (E_subulatus_16124) or (E_subulatus_16122) or (E_subulatus_16125)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-401</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14553_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__Galactosyl__45__12__45__diacyl__45__glycerols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__67__45__RXN" name="2.4.1.67-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20390) or (E_subulatus_01137)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5337</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__458_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1099_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__170_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__83__45__RXN" name="dolichyl-phosphate &amp;beta;-D-mannosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18188) or (E_subulatus_18187) or (E_subulatus_19866)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7922 , PWY-7979 , PWY-7921 , MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__171_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__1__46__94__45__RXN" name="2.4.1.94-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21329) or (E_subulatus_02946) or (E_subulatus_10094) or (E_subulatus_21330) or (E_subulatus_14790) or (E_subulatus_14789) or (E_subulatus_22704) or (E_subulatus_25831) or (E_subulatus_22686) or (E_subulatus_25830) or (E_subulatus_22703) or (E_subulatus_22685)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__Asparagine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__8541_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__2__46__26__45__RXN" name="protein xylosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10235) or (E_subulatus_10236) or (E_subulatus_00803) or (E_subulatus_10237) or (E_subulatus_07356) or (E_subulatus_25052) or (E_subulatus_10233) or (E_subulatus_25054) or (E_subulatus_25051) or (E_subulatus_20165) or (E_subulatus_10234) or (E_subulatus_00804) or (E_subulatus_25053)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6557</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__D__45__XYLOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__serines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Core__45__Protein__45__L__45__Ser__45__Xyl_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__2__46__31__45__RXN" name="NAD+&amp;mdash;protein-arginine ADP-ribosyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09582) or (E_subulatus_09581)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__L__45__Arginines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__557_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NIACINAMIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__4__46__99__46__6__45__RXN" name="2.4.99.6-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7434</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_B__45__Gal__45__14__45__NacGlc__45__R_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP__45__N__45__ACETYL__45__NEURAMINATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ALPHA__45__N__45__ACETYLNEURAMINYL__45__23__45__BETA__45__ETCETER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__5__46__1__46__19__45__RXN" name="2.5.1.19-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6163</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SHIKIMATE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__ENOLPYRUVYL__45__SHIKIMATE__45__5P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__5__46__1__46__32__45__RXN" name="2.5.1.32-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18355)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6475 , PWY-7943 , PWY-6287</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GERANYLGERANYL__45__PP_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__464_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__5__46__1__46__39__45__RXN" name="4-hydroxybenzoate-nonaprenyl transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12511) or (E_subulatus_12512) or (E_subulatus_19962) or (E_subulatus_09512) or (E_subulatus_08023) or (E_subulatus_12510)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5856 , PWY-5871 , PWY-6978</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__21340_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_4__45__hydroxybenzoate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NONAPRENYL__45__4__45__HYDROXYBENZOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__5__46__1__46__46__45__RXN" name="deoxyhypusine synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07266) or (E_subulatus_07267)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SPERMIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_EIF5A__45__LYSINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9973_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__313_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__5__46__1__46__58__45__RXN" name="2.5.1.58-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1174_4a) or (EsuBft484_10a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROT__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FARNESYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Protein__45__S__45__farnesyl__45__L__45__cysteines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__5__46__1__46__64__45__RXN" name="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08673)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5837</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ISOCHORISMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9924_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__6__46__1__46__22__45__RXN" name="2.6.1.22-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: VALDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__466_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CH3__45__MALONATE__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__6__46__1__46__57__45__RXN" name="aromatic-amino-acid transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16058)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Aromatic__45__Amino__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Aromatic__45__Oxoacids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__6__46__1__46__58__45__RXN" name="L-phenylalanine:pyruvate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20406)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5079 , PWY-7275</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHENYL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__6__46__1__46__63__45__RXN" name="2.6.1.63-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20406)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLYOX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14736_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__476_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__6__46__1__46__7__45__RXN" name="kynurenine-oxoglutarate transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20406)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6309</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14736_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__476_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__127__45__RXN" name="2.7.1.127-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6364 , PWY-6361 , PWY-6362</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_INOSITOL__45__1__45__4__45__5__45__TRISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__506_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__133__45__RXN" name="inositol-1,3,4-trisphosphate 6-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12838) or (E_subulatus_12837)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6366 , PWY-6365 , PWY-6554 , PWY-6362</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_INOSITOL__45__1__45__3__45__4__45__TRIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__505_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__134__45__RXN" name="inositol tetrakisphosphate 1-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12838) or (E_subulatus_12837)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4661 , PWY-6365</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__178_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1107_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__139__45__RXN" name="inositol-1,3,4-trisphosphate 6-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12838) or (E_subulatus_12837)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6554</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INOSITOL__45__1__45__3__45__4__45__TRIPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__506_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__140__45__RXN" name="2.7.1.140-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6365 , PWY-6554 , PWY-6372 , PWY-6366 , PWY-6362</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__505_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1107_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__148__45__RXN" name="4-(cytidine 5&apos;-diphospho)-2-C-methyl-D-erythritol kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03311) or (E_subulatus_03312) or (E_subulatus_03313) or (E_subulatus_03314)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7560 , NONMEVIPP-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_4__45__CYTIDINE__45__5__45__DIPHOSPHO__45__2__45__C_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__PHOSPHO__45__4__45__CYTIDINE__45__5__45__DIPHOSPHO__45__2__45__C__45__MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__149__45__RXN" name="2.7.1.149-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6367 , PWY-6351</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__5__45__PHOSPHA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHATIDYL__45__MYO__45__INOSITOL__45__45__45__BISPHOSPHA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__150__45__RXN" name="phosphatidylinositol-3-phosphate 5-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09584) or (E_subulatus_09585) or (E_subulatus_09586)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6352</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__177_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__35__45__BISPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__152__45__RXN" name="inositol hexakisphosphate kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24710) or (E_subulatus_24579) or (E_subulatus_24580) or (E_subulatus_24709) or (E_subulatus_24578)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6369</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MI__45__HEXAKISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__DIPHOSPHO__45__1D__45__MYO__45__INOSITOL__45__12346P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__153__45__RXN" name="2.7.1.153-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6352</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHATIDYL__45__MYO__45__INOSITOL__45__45__45__BISPHOSPHA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHATIDYLINOSITOL__45__345__45__TRIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__154__45__RXN" name="2.7.1.154-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6352</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1108_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__34__45__BISPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__160__45__RXN" name="2.7.1.160-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6689</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__phospho__45__ligated__45__tRNA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9007_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NIACINAMIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Spliced__45__tRNA__45__precursor_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__68__45__RXN" name="phosphatidylinositol 4 phosphate 5 kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05991) or (E_subulatus_20870) or (E_subulatus_21430) or (E_subulatus_09585) or (E_subulatus_00123) or (E_subulatus_23018) or (E_subulatus_23017) or (E_subulatus_10460) or (E_subulatus_03688) or (E_subulatus_23015) or (E_subulatus_23016) or (E_subulatus_18865) or (E_subulatus_22487) or (E_subulatus_09584) or (E_subulatus_00124) or (E_subulatus_03686) or (E_subulatus_03687)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6352 , PWY-6351</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1108_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHATIDYL__45__MYO__45__INOSITOL__45__45__45__BISPHOSPHA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__1__46__90__45__RXN" name="diphosphate:fructose-6-phosphate 1-phosphotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18454)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1042</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FRUCTOSE__45__16__45__DIPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__10__46__1__45__RXN" name="protein-tyrosine kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17863) or (E_subulatus_10408) or (E_subulatus_18635) or (E_subulatus_25115) or (E_subulatus_00026) or (E_subulatus_05897) or (E_subulatus_18766) or (E_subulatus_00028) or (E_subulatus_25118) or (E_subulatus_07438) or (E_subulatus_24275) or (E_subulatus_00268) or (E_subulatus_13141) or (E_subulatus_03220) or (E_subulatus_14261) or (E_subulatus_05893) or (E_subulatus_06209) or (E_subulatus_19573) or (E_subulatus_13138) or (E_subulatus_19175) or (E_subulatus_13140) or (E_subulatus_22679) or (E_subulatus_21727) or (E_subulatus_13739) or (E_subulatus_22677) or (E_subulatus_21728) or (E_subulatus_05896) or (E_subulatus_07437) or (E_subulatus_18366) or (E_subulatus_00027) or (E_subulatus_05894) or (E_subulatus_13139) or (E_subulatus_25117) or (E_subulatus_05895) or (E_subulatus_19574) or (E_subulatus_03219) or (E_subulatus_25116) or (E_subulatus_14697) or (E_subulatus_05898) or (E_subulatus_08563) or (E_subulatus_06208) or (E_subulatus_22678) or (E_subulatus_00025) or (E_subulatus_24775) or (E_subulatus_14190)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__Tyrosines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__tyrosine__45__phosphates_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__11__46__19__45__RXN" name="phosphorylase kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10272) or (E_subulatus_10274) or (E_subulatus_10273) or (E_subulatus_15414) or (E_subulatus_10275) or (E_subulatus_15415) or (E_subulatus_07763)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Phosphorylase__45__b_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Phosphorylase__45__a_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__11__46__2__45__RXN" name="pyruvate dehydrogenase kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06005) or (E_subulatus_00851) or (E_subulatus_06004)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__L__45__serine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pyruvate__45__Dehydrogenase__45__Phosphoserine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__11__46__20__45__RXN" name="2.7.11.20-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21477) or (E_subulatus_14456) or (E_subulatus_02038) or (E_subulatus_02037) or (E_subulatus_14457)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Elongation__45__factor__45__2_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Elongation__45__factor__45__2__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__11__46__24__45__RXN" name="MAP kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23699) or (E_subulatus_03322) or (E_subulatus_14784) or (E_subulatus_01825) or (E_subulatus_14783) or (E_subulatus_23698) or (E_subulatus_14782) or (E_subulatus_13007) or (E_subulatus_09256) or (E_subulatus_01824) or (E_subulatus_02482) or (E_subulatus_02483) or (E_subulatus_03324) or (E_subulatus_11570) or (E_subulatus_09255) or (E_subulatus_25407) or (E_subulatus_11569) or (E_subulatus_01823) or (E_subulatus_02558) or (E_subulatus_05112) or (E_subulatus_02557) or (E_subulatus_25406) or (E_subulatus_02484)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__Ser__45__or__45__L__45__Thr__45__L__45__Pro_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__Ser__45__or__45__L__45__Thr__45__P__45__L__45__Pro_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__11__46__25__45__RXN" name="2.7.11.25-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15563) or (E_subulatus_03768) or (E_subulatus_17688) or (E_subulatus_09694) or (E_subulatus_02337) or (E_subulatus_16340) or (E_subulatus_04122) or (E_subulatus_02336) or (E_subulatus_09693) or (E_subulatus_21789) or (E_subulatus_00294) or (E_subulatus_09692)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MAPKK__45__L__45__serine__45__or__45__L__45__threonine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MAPKK__45__Ser__45__or__45__Thr__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__11__46__30__45__RXN" name="transmembrane receptor protein serine/threonine kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15024) or (E_subulatus_19163) or (E_subulatus_15023)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Receptor__45__protein__45__Ser__45__or__45__Thr_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Receptor__45__Protein__45__Ser__45__or__45__Thr__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__12__46__1__45__RXN" name="tyrosine-phosphorylation-regulated kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10408) or (E_subulatus_18635) or (E_subulatus_25115) or (E_subulatus_00026) or (E_subulatus_05897) or (E_subulatus_01751) or (E_subulatus_01749) or (E_subulatus_00028) or (E_subulatus_25118) or (E_subulatus_05571) or (E_subulatus_07438) or (E_subulatus_24275) or (E_subulatus_00268) or (E_subulatus_13141) or (E_subulatus_12768) or (E_subulatus_03220) or (E_subulatus_14261) or (E_subulatus_05893) or (E_subulatus_06209) or (E_subulatus_13138) or (E_subulatus_13140) or (E_subulatus_22679) or (E_subulatus_21727) or (E_subulatus_13739) or (E_subulatus_22677) or (E_subulatus_21728) or (E_subulatus_05896) or (E_subulatus_07437) or (E_subulatus_01750) or (E_subulatus_00027) or (E_subulatus_05894) or (E_subulatus_13139) or (E_subulatus_25117) or (E_subulatus_05895) or (E_subulatus_03219) or (E_subulatus_25116) or (E_subulatus_14697) or (E_subulatus_05898) or (E_subulatus_08563) or (E_subulatus_06208) or (E_subulatus_22678) or (E_subulatus_12769) or (E_subulatus_00025) or (E_subulatus_14190)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__serines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__Phosphoserines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__12__46__2__45__RXN" name="MAP kinase kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11765) or (E_subulatus_05571) or (E_subulatus_08344) or (E_subulatus_13756) or (E_subulatus_01825) or (E_subulatus_13755) or (E_subulatus_23748) or (E_subulatus_14228) or (E_subulatus_23747) or (E_subulatus_14229) or (E_subulatus_13007) or (E_subulatus_01824) or (E_subulatus_07904) or (E_subulatus_02063) or (E_subulatus_11764) or (E_subulatus_01823) or (E_subulatus_05112) or (E_subulatus_04122) or (E_subulatus_08345) or (E_subulatus_08342) or (E_subulatus_13757) or (E_subulatus_08343)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Mitogen__45__Activated__45__Protein__45__Kinase__45__L__45__Thr_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MAP__45__Kinase__45__L__45__Phosphothreonine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__13__46__3__45__RXN" name="2.7.13.3-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11792) or (E_subulatus_07606) or (E_subulatus_25609) or (E_subulatus_07603) or (E_subulatus_10680) or (E_subulatus_05367) or (E_subulatus_15491) or (E_subulatus_15489) or (E_subulatus_03615) or (E_subulatus_22699) or (E_subulatus_22700) or (E_subulatus_07604) or (E_subulatus_15490) or (E_subulatus_25610) or (E_subulatus_13619) or (E_subulatus_10679) or (E_subulatus_22701) or (E_subulatus_00132) or (E_subulatus_22702) or (E_subulatus_03616) or (E_subulatus_07605)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__Histidines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__phospho__45__L__45__histidines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__4__46__10__45__RXN" name="2.7.4.10-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25782) or (E_subulatus_25785) or (E_subulatus_15295) or (E_subulatus_25784) or (E_subulatus_25783)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Nucleoside__45__Triphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Nucleoside__45__Diphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__4__46__24__45__RXN" name="5-diphosphoinositol-pentakisphosphate 1-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24710) or (E_subulatus_24579) or (E_subulatus_24580) or (E_subulatus_24709) or (E_subulatus_24578)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6369</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__DIPHOSPHO__45__1D__45__MYO__45__INOSITOL__45__12346P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11938_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__7__46__1__45__RXN" name="NMN adenylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21810)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY3O-4106 , NAD-BIOSYNTHESIS-III</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NICOTINAMIDE_NUCLEOTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__7__46__11__45__RXN" name="UTP:xylose-1-phosphate uridylyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11660) or (E_subulatus_11661)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__490_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP__45__D__45__XYLOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__7__46__13__45__RXN" name="2.7.7.13-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5659 , PWY-882</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MANNOSE__45__1P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__7__46__14__45__RXN" name="ethanolamine-phosphate cytidylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18244)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY4FS-6 , PWY-7782</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHORYL__45__ETHANOLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CDP__45__ETHANOLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__7__46__15__45__RXN" name="CTP:phosphocholine cytidylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17600)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3561 , PWY-7782 , PWY-7818 , PWY3O-450 , PWY-7886 , PWY4FS-2</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHORYL__45__CHOLINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CDP__45__CHOLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__7__46__30__45__RXN" name="2.7.7.30-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft95_15a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__488_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GUANOSINE_DIPHOSPHATE_FUCOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__7__46__44__45__RXN" name="glucuronate-1-phosphate uridylyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11660) or (E_subulatus_11661)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4841</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__510_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__7__46__60__45__RXN" name="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22261) or (E_subulatus_22262)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7560 , NONMEVIPP-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__C__45__METHYL__45__D__45__ERYTHRITOL__45__4__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_4__45__CYTIDINE__45__5__45__DIPHOSPHO__45__2__45__C_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__7__46__8__45__RXN" name="polyribonucleotide nucleotidyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24865) or (E_subulatus_01718) or (E_subulatus_24866)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ssRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ssRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Nucleoside__45__Diphosphates_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__8__46__11__45__RXN" name="phosphatidylinositol synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23680)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PHOSLIPSYN2-PWY , PWY-7625 , PWY-6351 , PWY-6352</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CDPDIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__1__45__phosphatidyl__45__inositols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__8__46__15__45__RXN" name="UDP-N-acetylglucosamine&amp;mdash;dolichyl-phosphate N-acetylglucosaminephosphotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19936) or (E_subulatus_06884) or (E_subulatus_18807) or (E_subulatus_19937) or (E_subulatus_18805) or (E_subulatus_01177) or (E_subulatus_06885) or (E_subulatus_01176) or (E_subulatus_18806)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__190_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__7__46__8__46__24__45__RXN" name="2.7.8.24-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6826</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHOLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CDPDIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHATIDYLCHOLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2__46__8__46__1__46__6__45__RXN" name="biotin synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02357)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7380 , PWY0-1507</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Sulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DETHIOBIOTIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Unsulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BIOTIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CH33ADO_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Oxidized__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2KETO__45__3METHYLVALERATE__45__RXN" name="(S)-3-methyl-2-oxopentanoate dehydrogenase (acylating)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14800)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ILEUDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETO__45__3__45__METHYL__45__VALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__METHYL__45__BUTYRYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2KETO__45__4METHYL__45__PENTANOATE__45__DEHYDROG__45__RXN" name="4-methyl-2-oxopentanoate dehydrogenase (acylating)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14800)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: LEU-DEG2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2K__45__4CH3__45__PENTANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ISOVALERYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2OXOGLUTDECARB__45__RXN" name="2-oxoglutarate decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23120) or (E_subulatus_23121) or (E_subulatus_23122) or (E_subulatus_21822)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5084 , PWY66-398</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxo__45__glutarate__45__dehydrogenase__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Oxo__45__glutarate__45__dehydro__45__suc__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2PGADEHYDRAT__45__RXN" name="phosphopyruvate hydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21947) or (E_subulatus_16508) or (E_subulatus_16455) or (E_subulatus_03609) or (E_subulatus_01963) or (E_subulatus_16456) or (E_subulatus_16452) or (E_subulatus_03608) or (E_subulatus_16454) or (E_subulatus_18121) or (E_subulatus_16451) or (E_subulatus_16453) or (E_subulatus_01962)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: P122-PWY , PWY-8004 , PWY-7003 , PWY-7218 , PWY-6142 , P124-PWY , PWY-1042 , PWY-5484 , GLYCOLYSIS , PWY-6901 , GLUCONEO-PWY , PWY-2221 , PWY-5723 , ANAGLYCOLYSIS-PWY , NPGLUCAT-PWY , P341-PWY , PWY-1622 , PWY-6886 , PWY66-399 , PWY-7124</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__PG_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_2TRANSKETO__45__RXN" name="transketolase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01924) or (E_subulatus_25188) or (E_subulatus_25187)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5723 , P185-PWY , CALVIN-PWY , PWY-6901 , PWY-1861 , P21-PWY , NONOXIPENT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_XYLULOSE__45__5__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ERYTHROSE__45__4P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__CH3__45__2__45__OXOBUTANOATE__45__OH__45__CH3__45__XFER__45__RXN" name="3-methyl-2-oxobutanoate hydroxymethyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19833)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PANTO-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETO__45__ISOVALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__DEHYDROPANTOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__DEHYDROQUINATE__45__DEHYDRATASE__45__RXN" name="3-dehydroquinate dehydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21777) or (E_subulatus_01962) or (E_subulatus_17155)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6707 , QUINATEDEG-PWY , PWY-6416 , PWY-6163</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DEHYDROQUINATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__DEHYDRO__45__SHIKIMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__DEHYDROQUINATE__45__SYNTHASE__45__RXN" name="3-dehydroquinate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14362) or (E_subulatus_19746) or (E_subulatus_19747) or (E_subulatus_19748) or (E_subulatus_19749)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6164</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__DEOXY__45__D__45__ARABINO__45__HEPTULOSONATE__45__7__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DEHYDROQUINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__HYDROXYBUTYRATE__45__DEHYDROGENASE__45__RXN" name="3-hydroxybutyrate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20831) or (E_subulatus_09945)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-368 , PWY66-367</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__335_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__KETOBUTYRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__HYDROXYBUTYRYL__45__COA__45__DEHYDROGENASE__45__RXN" name="3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETOACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__3__45__HYDROXYBUTANOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__HYDROXYDECANOYL__45__ACP__45__DEHYDR__45__RXN" name="3-hydroxyacyl-[acp] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: FASYN-ELONG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OH__45__ACYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_TRANS__45__D2__45__ENOYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__HYDROXYISOBUTYRATE__45__DEHYDROGENASE__45__RXN" name="3-hydroxyisobutyrate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02116) or (E_subulatus_09945) or (E_subulatus_05762)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: VALDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12175_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CH3__45__MALONATE__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__HYDROXYISOBUTYRYL__45__COA__45__HYDROLASE__45__RXN" name="3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: VALDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12173_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12175_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__ISOPROPYLMALDEHYDROG__45__RXN" name="3-ISOPROPYLMALDEHYDROG-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17009) or (E_subulatus_02601) or (E_subulatus_17221) or (E_subulatus_02602) or (E_subulatus_24609) or (E_subulatus_13130) or (E_subulatus_13131)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6871 , LEUSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__D__45__THREO__45__HYDROXY__45__3__45__CARBOXY__45__ISOCAPROATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7100_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__ISOPROPYLMALISOM__45__RXN" name="3-isopropylmalate dehydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21073) or (E_subulatus_16031) or (E_subulatus_16030) or (E_subulatus_03963) or (E_subulatus_16032) or (E_subulatus_16033) or (E_subulatus_21072)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6871 , LEUSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__9451_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__CARBOXY__45__3__45__HYDROXY__45__ISOCAPROATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__OXOACYL__45__ACP__45__REDUCT__45__RXN" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: FASYN-ELONG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_B__45__KETOACYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OH__45__ACYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__OXOACYL__45__ACP__45__SYNTH__45__BASE__45__RXN" name="acetoacetyl-[acp] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13005) or (E_subulatus_08948) or (E_subulatus_13006) or (E_subulatus_15038) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5965 , PWY-5966 , PWY-7388 , FASYN-INITIAL-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Acetoacetyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__OXOACYL__45__ACP__45__SYNTH__45__RXN" name="&amp;beta;-ketoacyl-ACP synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_15038) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: FASYN-ELONG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Saturated__45__Fatty__45__Acyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_B__45__KETOACYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__PHOSPHOGLYCERATE__45__PHOSPHATASE__45__RXN" name="3-PHOSPHOGLYCERATE-PHOSPHATASE-RXN" reversible="false" fast="false">
        <listOfReactants>
          <speciesReference species="M_G3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCERATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__45__SULFINOALANINE__45__AMINOTRANSFERASE__45__RXN" name="3-SULFINOALANINE-AMINOTRANSFERASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16058)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: CYSTEINE-DEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__SULFINOALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__SULFINYL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__1__46__47__45__RXN" name="1-alkyl-2-acetylglycerophosphocholine esterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16168) or (E_subulatus_13048) or (E_subulatus_13047) or (E_subulatus_16169) or (E_subulatus_16167) or (E_subulatus_13046)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Alkyl__45__acetyl__45__glycero__45__phosphocholines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__Alkyl__45__sn__45__glycero__45__3__45__phosphocholines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__1__46__64__45__RXN" name="all-trans-retinyl-palmitate hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25832) or (E_subulatus_19092) or (E_subulatus_14865) or (E_subulatus_18262) or (E_subulatus_18257) or (E_subulatus_21870) or (E_subulatus_19094) or (E_subulatus_21230) or (E_subulatus_04105) or (E_subulatus_25092) or (E_subulatus_19095) or (E_subulatus_16013) or (E_subulatus_12303) or (E_subulatus_12304) or (E_subulatus_18259) or (E_subulatus_00063) or (E_subulatus_15207) or (E_subulatus_18261) or (E_subulatus_03119) or (E_subulatus_00064) or (E_subulatus_15388) or (E_subulatus_14143) or (E_subulatus_04561) or (E_subulatus_25438) or (E_subulatus_15338) or (E_subulatus_18263) or (E_subulatus_02795) or (E_subulatus_03121) or (E_subulatus_21869) or (E_subulatus_15387) or (E_subulatus_06890) or (E_subulatus_02797) or (E_subulatus_24432) or (E_subulatus_08500) or (E_subulatus_18256) or (E_subulatus_19093) or (E_subulatus_15339) or (E_subulatus_06891) or (E_subulatus_14668) or (E_subulatus_02796) or (E_subulatus_25439) or (E_subulatus_25833) or (E_subulatus_03118) or (E_subulatus_16015) or (E_subulatus_10229) or (E_subulatus_24429) or (E_subulatus_24431) or (E_subulatus_14705) or (E_subulatus_12305) or (E_subulatus_04562) or (E_subulatus_18255) or (E_subulatus_09863) or (E_subulatus_24430) or (E_subulatus_05151) or (E_subulatus_19091) or (E_subulatus_04563) or (E_subulatus_14145) or (E_subulatus_15337) or (E_subulatus_05150) or (E_subulatus_00065) or (E_subulatus_18258) or (E_subulatus_06892) or (E_subulatus_16014) or (E_subulatus_14144) or (E_subulatus_03122) or (E_subulatus_21634) or (E_subulatus_15859) or (E_subulatus_18260) or (E_subulatus_03120) or (E_subulatus_25091) or (E_subulatus_03117)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHOCOLA_A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13524_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PALMITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__1__46__69__45__RXN" name="3.1.1.69-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01568) or (E_subulatus_01569)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__452_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1113_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__13__46__4__45__RXN" name="3.1.13.4-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07940) or (E_subulatus_01966) or (E_subulatus_01965) or (E_subulatus_03564) or (E_subulatus_01967)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_mRNAs__45__With__45__PolyA__45__Tails_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_mRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__21__46__4__45__RXN" name="3.1.21.4-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14687) or (E_subulatus_18427) or (E_subulatus_14689) or (E_subulatus_05801) or (E_subulatus_02161) or (E_subulatus_03736) or (E_subulatus_13687) or (E_subulatus_10078) or (E_subulatus_05774) or (E_subulatus_07961) or (E_subulatus_22559) or (E_subulatus_22552) or (E_subulatus_07057) or (E_subulatus_07059) or (E_subulatus_07959) or (E_subulatus_05775) or (E_subulatus_06919) or (E_subulatus_14685) or (E_subulatus_18813) or (E_subulatus_06317) or (E_subulatus_22239) or (E_subulatus_21537) or (E_subulatus_21267) or (E_subulatus_18428) or (E_subulatus_21268) or (E_subulatus_06918) or (E_subulatus_07960) or (E_subulatus_13689) or (E_subulatus_22236) or (E_subulatus_25330) or (E_subulatus_01059) or (E_subulatus_03737) or (E_subulatus_09305) or (E_subulatus_22264) or (E_subulatus_05802) or (E_subulatus_07792) or (E_subulatus_22551) or (E_subulatus_02213) or (E_subulatus_14642) or (E_subulatus_06903) or (E_subulatus_09306) or (E_subulatus_25331) or (E_subulatus_22557) or (E_subulatus_25329) or (E_subulatus_22554) or (E_subulatus_13688) or (E_subulatus_07794) or (E_subulatus_06316) or (E_subulatus_12317) or (E_subulatus_20855) or (E_subulatus_03735) or (E_subulatus_22553) or (E_subulatus_07793) or (E_subulatus_06314) or (E_subulatus_07060) or (E_subulatus_07962) or (E_subulatus_06315) or (E_subulatus_25332) or (E_subulatus_17481) or (E_subulatus_06921) or (E_subulatus_22560) or (E_subulatus_10077) or (E_subulatus_22555) or (E_subulatus_13158) or (E_subulatus_05776) or (E_subulatus_16506) or (E_subulatus_00613) or (E_subulatus_11838) or (E_subulatus_07058) or (E_subulatus_02160) or (E_subulatus_00293) or (E_subulatus_10271) or (E_subulatus_22238) or (E_subulatus_00601) or (E_subulatus_19675) or (E_subulatus_07795) or (E_subulatus_00600) or (E_subulatus_11839) or (E_subulatus_14688) or (E_subulatus_10076) or (E_subulatus_14686) or (E_subulatus_22556) or (E_subulatus_10883) or (E_subulatus_00612) or (E_subulatus_00377) or (E_subulatus_22558) or (E_subulatus_06920) or (E_subulatus_14643) or (E_subulatus_22237) or (E_subulatus_00292) or (E_subulatus_07796) or (E_subulatus_25156)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Double__45__Stranded__45__DNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Double__45__Stranded__45__DNA__45__with__45__terminal__45__PO4s_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__26__46__11__45__RXN" name="3&apos;-tRNA processing endoribonuclease" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22470)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_tRNA__45__precursors_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_mature__45__tRNA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SS__45__Oligoribonucleotides_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__26__46__3__45__RXN" name="ribonuclease III" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13771) or (E_subulatus_21767) or (E_subulatus_21385) or (E_subulatus_13772) or (E_subulatus_21383) or (E_subulatus_12947) or (E_subulatus_21386) or (E_subulatus_21769) or (E_subulatus_21387) or (E_subulatus_19686) or (E_subulatus_21384) or (E_subulatus_12946) or (E_subulatus_19688) or (E_subulatus_12945) or (E_subulatus_21768) or (E_subulatus_19687)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RNASE__45__III__45__MRNA__45__PROCESSING__45__SUBSTRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RNASE__45__III__45__PROCESSING__45__PRODUCT__45__MRNA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_mRNA__45__Fragments_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__26__46__4__45__RXN" name="ribonuclease" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22295) or (E_subulatus_23422) or (E_subulatus_21315) or (E_subulatus_23423) or (E_subulatus_21312) or (E_subulatus_03652) or (E_subulatus_21316) or (E_subulatus_24941) or (E_subulatus_24251) or (E_subulatus_05133) or (E_subulatus_22296) or (E_subulatus_21313) or (E_subulatus_21314) or (E_subulatus_21317)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RNA__45__DNA__45__hybrids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DNA__45__Holder_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Nucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__26__46__5__45__RXN" name="ribonuclease P" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00218) or (E_subulatus_00219)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1479</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2352_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2353_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_tRNA__45__fragment_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__27__46__1__45__RXN" name="3.1.27.1-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft170_11a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__Prime__45__Ribonucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__phosphooligonucleotides_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__27__46__9__45__RXN" name="tRNA-intron endonuclease" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08300) or (E_subulatus_08301)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6689 , PWY-7803</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2350_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pre__45__tRNA__45__3__45__prime__45__half__45__molecules_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_tRNA__45__Introns_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pre__45__tRNA__45__5__45__prime__45__half__45__molecules_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__3__46__16__45__RXN" name="phosphoprotein phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047) or (E_subulatus_08269) or (E_subulatus_05164) or (E_subulatus_00366) or (E_subulatus_05161) or (E_subulatus_16971) or (E_subulatus_25824) or (E_subulatus_19152) or (E_subulatus_06959) or (E_subulatus_00837) or (E_subulatus_09293) or (E_subulatus_20806) or (E_subulatus_10537) or (E_subulatus_22647) or (E_subulatus_00730) or (E_subulatus_10538) or (E_subulatus_22874) or (E_subulatus_15406) or (E_subulatus_25826) or (E_subulatus_05162) or (E_subulatus_06784) or (E_subulatus_01570) or (E_subulatus_00006) or (E_subulatus_06783) or (E_subulatus_07651) or (E_subulatus_13232) or (E_subulatus_15370) or (E_subulatus_00729) or (E_subulatus_02481) or (E_subulatus_15368) or (E_subulatus_02809) or (E_subulatus_13233) or (E_subulatus_07652) or (E_subulatus_00728) or (E_subulatus_06388) or (E_subulatus_13483) or (E_subulatus_22646) or (E_subulatus_01822) or (E_subulatus_13234) or (E_subulatus_21424) or (E_subulatus_19259) or (E_subulatus_24006) or (E_subulatus_09292) or (E_subulatus_21423) or (E_subulatus_15369) or (E_subulatus_15367) or (E_subulatus_10536) or (E_subulatus_05121) or (E_subulatus_05163) or (E_subulatus_07650) or (E_subulatus_25825)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__Ser__45__or__45__Thr__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Protein__45__L__45__serine__45__or__45__L__45__threonine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__3__46__46__45__RXN" name="fructose-2,6-bisphosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19077) or (E_subulatus_16329) or (E_subulatus_24377) or (E_subulatus_04274) or (E_subulatus_19321) or (E_subulatus_04275) or (E_subulatus_18542) or (E_subulatus_16330) or (E_subulatus_19074) or (E_subulatus_16328) or (E_subulatus_19075) or (E_subulatus_19076)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-423</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__535_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__3__46__56__45__RXN" name="3.1.3.56-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6363</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INOSITOL__45__1__45__4__45__5__45__TRISPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_INOSITOL__45__1__45__4__45__BISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__3__46__57__45__RXN" name="3.1.3.57-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07696) or (EsuBft1927_4a)</p>
            <p>CATEGORIES: ORTHOLOGY and MANUAL</p>
            <p>SUBSYSTEM: PWY-6363</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_INOSITOL__45__1__45__4__45__BISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__MYO__45__INOSITOL__45__4__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__3__46__62__45__RXN" name="inositol-1,3,4,5-tetrakisphosphate 3-phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15371)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6364</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__506_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_INOSITOL__45__1__45__4__45__5__45__TRISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__3__46__66__45__RXN" name="3.1.3.66-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6368</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__34__45__BISPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__177_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__3__46__67__45__RXN" name="phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15371) or (E_subulatus_15367)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6368</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHATIDYLINOSITOL__45__345__45__TRIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHATIDYL__45__MYO__45__INOSITOL__45__45__45__BISPHOSPHA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__3__46__76__45__RXN" name="3.1.3.76-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft175_15a) or (EsuBft202_6a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9001_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9002_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__3__46__77__45__RXN" name="acireductone synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01842)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8999_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__85_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__4__46__1__45__RXN" name="3.1.4.1-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21315) or (E_subulatus_21312) or (E_subulatus_21316) or (E_subulatus_21313) or (E_subulatus_21314) or (E_subulatus_21317)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Oligonucleotides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Nucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oligonucleotides_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__4__46__11__45__RXN" name="phosphatidylinositol phospholipase C" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18898) or (E_subulatus_18897)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7039 , PWY-6367 , LIPASYN-PWY , PWY-6351</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHATIDYL__45__MYO__45__INOSITOL__45__45__45__BISPHOSPHA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INOSITOL__45__1__45__4__45__5__45__TRISPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__4__46__14__45__RXN" name="3.1.4.14-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6012</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PANTETHEINE__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_apo__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__4__46__17__45__RXN" name="3&apos;,5&apos;-cyclic-nucleotide phosphodiesterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21786) or (E_subulatus_11674) or (E_subulatus_07899) or (E_subulatus_21788) or (E_subulatus_06472) or (E_subulatus_21791) or (E_subulatus_07900) or (E_subulatus_21787) or (E_subulatus_23994) or (E_subulatus_23995) or (E_subulatus_11673)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cyclic__45__3__45__5__45__Nucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Nucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__1__46__6__46__12__45__RXN" name="N-acetylgalactosamine-4-sulfatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03034) or (E_subulatus_12575) or (E_subulatus_16373) or (E_subulatus_03035) or (E_subulatus_18924) or (E_subulatus_03033) or (E_subulatus_03036)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHONDROITIN__45__4__45__SULFATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Chondroitin__45__N__45__acetyl__45__galactosamines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SULFATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__106__45__RXN" name="mannosyl-oligosaccharide &amp;alpha;-1,2-glucosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24226) or (E_subulatus_14036) or (E_subulatus_05658) or (E_subulatus_15488) or (E_subulatus_24225) or (E_subulatus_05660) or (E_subulatus_05659) or (E_subulatus_15487) or (E_subulatus_14035) or (E_subulatus_14037) or (E_subulatus_24224) or (E_subulatus_04881)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7918 , PWY-7919</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__18077_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Glc2Man9GlcNAc2__45__proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__113__45__RXN" name="3.2.1.113-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1226_2a) or (EsuBft46_12a) or (EsuBft3283_3a) or (EsuBft77_13a) or (EsuBft1385_13a) or (EsuBft1451_2a) or (EsuBft874_12a) or (EsuBft532_5a) or (EsuBft527_7a) or (EsuBft1273_6a) or (EsuBft4329_4a) or (EsuBft448_13a) or (EsuBft366_11a) or (EsuBft1207_7a) or (EsuBft224_9a) or (EsuBft265_13a) or (EsuBft1270_4a) or (EsuBft1461_8a) or (EsuBft918_2a) or (EsuBft777_3a) or (EsuBft867_4a) or (EsuBft551_16a) or (EsuBft545_6a) or (EsuBft2267_2a) or (EsuBft263_24a) or (EsuBft2380_3a) or (EsuBft84_6a) or (EsuBft545_2a) or (EsuBft4944_2a) or (EsuBft989_3a) or (EsuBft700_3a) or (EsuBft1355_4a) or (EsuBft35_20a) or (EsuBft677_11a) or (EsuBft42_35a) or (EsuBft1009_5a) or (EsuBft3276_3a) or (EsuBft2017_2a) or (EsuBft1087_2a) or (EsuBft655_2a) or (EsuBft2470_2a) or (EsuBft346_8a) or (EsuBft203_15a) or (EsuBft71_26a) or (EsuBft2366_2a) or (EsuBft1893_3a) or (EsuBft663_18a) or (EsuBft2259_3a) or (EsuBft1170_2a) or (EsuBft729_2a) or (EsuBft719_12a) or (EsuBft2319_2a) or (EsuBft1147_2a) or (EsuBft2319_3a) or (EsuBft788_8a) or (EsuBft675_11a) or (EsuBft849_3a) or (EsuBft818_3a) or (EsuBft3373_2a) or (EsuBft582_9a) or (EsuBft323_8a) or (EsuBft280_24a) or (EsuBft637_7a) or (EsuBft217_35a) or (EsuBft874_2a) or (EsuBft597_7a) or (EsuBft821_13a) or (EsuBft1066_6a) or (EsuBft572_4a) or (EsuBft1235_3a) or (EsuBft797_19a) or (EsuBft908_3a) or (EsuBft127_21a) or (EsuBft159_13a) or (EsuBft1562_2a) or (EsuBft646_4a) or (EsuBft1221_9a) or (EsuBft465_9a) or (EsuBft1171_4a) or (EsuBft2089_3a) or (EsuBft3349_2a) or (EsuBft1165_4a) or (EsuBft2087_4a) or (EsuBft715_7a) or (EsuBft74_22a) or (EsuBft263_14a) or (EsuBft1669_4a) or (EsuBft925_12a) or (EsuBft618_6a) or (EsuBft126_5a) or (EsuBft52_43a) or (EsuBft680_8a) or (EsuBft148_37a) or (EsuBft1182_6a) or (EsuBft1286_2a) or (EsuBft1723_6a) or (EsuBft442_5a) or (EsuBft172_11a) or (EsuBft137_8a) or (EsuBft2362_2a) or (EsuBft597_10a) or (EsuBft3774_2a) or (EsuBft165_14a) or (EsuBft681_3a) or (EsuBft1158_4a) or (EsuBft1435_6a) or (EsuBft96_19a) or (EsuBft1906_4a) or (EsuBft433_11a) or (EsuBft860_7a) or (EsuBft328_11a) or (EsuBft281_9a) or (EsuBft885_9a) or (EsuBft552_2a) or (EsuBft1019_9a) or (EsuBft2164_2a) or (EsuBft1395_3a) or (EsuBft42_10a) or (EsuBft415_19a) or (EsuBft764_6a) or (EsuBft204_11a) or (EsuBft1126_10a) or (EsuBft2413_3a) or (EsuBft1728_4a) or (EsuBft358_9a) or (EsuBft945_7a) or (EsuBft209_18a) or (EsuBft682_5a) or (EsuBft3082_2a) or (EsuBft323_11a) or (EsuBft32_27a) or (EsuBft190_7a) or (EsuBft1486_4a) or (EsuBft58_11a) or (EsuBft1099_10a) or (EsuBft70_8a) or (EsuBft731_8a) or (EsuBft52_44a) or (EsuBft307_12a) or (EsuBft186_6a) or (EsuBft504_4a) or (EsuBft3245_4a) or (EsuBft3349_3a) or (EsuBft91_16a) or (EsuBft480_9a) or (EsuBft96_7a) or (EsuBft1580_7a) or (EsuBft611_3a) or (EsuBft472_7a) or (EsuBft201_5a) or (EsuBft563_11a) or (EsuBft594_2a) or (EsuBft37_13a) or (EsuBft52_29a) or (EsuBft132_10a) or (EsuBft32_23a) or (EsuBft200_6a) or (EsuBft555_13a) or (EsuBft287_7a) or (EsuBft1657_3a) or (EsuBft359_5a) or (EsuBft892_6a) or (EsuBft248_20a) or (EsuBft2361_2a) or (EsuBft239_11a) or (EsuBft2188_2a) or (EsuBft196_17a) or (EsuBft362_12a) or (EsuBft1072_11a) or (EsuBft1279_3a) or (EsuBft153_13a) or (EsuBft729_8a) or (EsuBft818_6a) or (EsuBft834_4a) or (EsuBft741_5a) or (EsuBft661_11a) or (EsuBft68_7a) or (EsuBft51_27a) or (EsuBft1186_4a) or (EsuBft3035_3a) or (EsuBft41_19a) or (EsuBft1029_10a) or (EsuBft206_11a) or (EsuBft1286_4a) or (EsuBft1156_3a) or (EsuBft358_15a) or (EsuBft207_11a) or (EsuBft391_9a) or (EsuBft1672_4a) or (EsuBft1552_2a) or (EsuBft78_25a) or (EsuBft100_8a) or (EsuBft62_10a) or (EsuBft2025_3a) or (EsuBft1186_2a) or (EsuBft1474_4a) or (EsuBft441_11a) or (EsuBft2628_2a) or (EsuBft2011_2a) or (EsuBft1543_5a) or (EsuBft566_7a) or (EsuBft1108_2a) or (EsuBft352_15a) or (EsuBft431_9a) or (EsuBft212_6a) or (EsuBft2326_4a) or (EsuBft450_15a) or (EsuBft2894_3a) or (EsuBft175_18a) or (EsuBft708_8a) or (EsuBft67_13a) or (EsuBft263_15a) or (EsuBft570_6a) or (EsuBft209_5a) or (EsuBft2306_4a) or (EsuBft172_23a) or (EsuBft1450_5a) or (EsuBft997_4a) or (EsuBft154_18a) or (EsuBft2350_4a) or (EsuBft602_6a) or (EsuBft688_4a) or (EsuBft734_9a) or (EsuBft914_5a) or (EsuBft131_17a) or (EsuBft1250_3a) or (EsuBft1237_4a) or (EsuBft1339_4a) or (EsuBft1935_4a) or (EsuBft804_23a) or (EsuBft455_10a) or (EsuBft1173_5a) or (EsuBft421_8a) or (EsuBft137_17a) or (EsuBft267_5a) or (EsuBft603_9a) or (EsuBft83_12a) or (EsuBft578_2a) or (EsuBft615_11a) or (EsuBft350_25a) or (EsuBft1086_8a) or (EsuBft870_11a) or (EsuBft32_25a) or (EsuBft375_11a) or (EsuBft1788_3a) or (EsuBft525_19a) or (EsuBft716_9a) or (EsuBft127_13a) or (EsuBft1094_21a) or (EsuBft65_20a) or (EsuBft4362_2a) or (EsuBft818_7a) or (EsuBft2465_6a) or (EsuBft1163_8a) or (EsuBft183_6a) or (EsuBft79_2a) or (EsuBft100_23a) or (EsuBft44_14a) or (EsuBft1127_5a) or (EsuBft2104_3a) or (EsuBft88_19a) or (EsuBft396_17a) or (EsuBft64_22a) or (EsuBft1365_6a) or (EsuBft680_12a) or (EsuBft342_14a) or (EsuBft352_14a) or (EsuBft1248_2a) or (EsuBft1719_6a) or (EsuBft2228_4a) or (EsuBft216_8a) or (EsuBft118_2a) or (EsuBft207_28a) or (EsuBft47_2a) or (EsuBft97_8a) or (EsuBft115_9a) or (EsuBft989_2a) or (EsuBft320_5a) or (EsuBft465_11a) or (EsuBft32_56a) or (EsuBft911_5a) or (EsuBft307_10a) or (EsuBft2208_6a) or (EsuBft2786_3a) or (EsuBft415_9a) or (EsuBft89_4a) or (EsuBft72_24a) or (EsuBft2304_2a) or (EsuBft1031_7a) or (EsuBft560_2a) or (EsuBft1658_5a) or (EsuBft138_18a) or (EsuBft355_7a) or (EsuBft424_10a) or (EsuBft1123_3a) or (EsuBft2711_2a) or (EsuBft334_2a) or (EsuBft534_7a) or (EsuBft225_2a) or (EsuBft766_3a) or (EsuBft120_5a) or (EsuBft1190_7a) or (EsuBft35_12a) or (EsuBft409_4a) or (EsuBft61_4a) or (EsuBft414_9a) or (EsuBft1005_8a) or (EsuBft331_13a) or (EsuBft137_4a) or (EsuBft116_11a) or (EsuBft422_4a) or (EsuBft898_4a) or (EsuBft402_10a) or (EsuBft116_2a) or (EsuBft165_19a) or (EsuBft546_7a) or (EsuBft58_27a) or (EsuBft374_11a) or (EsuBft1131_2a) or (EsuBft538_8a) or (EsuBft2050_2a) or (EsuBft804_24a) or (EsuBft491_2a) or (EsuBft366_17a) or (EsuBft168_14a) or (EsuBft126_19a) or (EsuBft819_12a) or (EsuBft1673_5a) or (EsuBft74_10a) or (EsuBft708_6a) or (EsuBft530_8a) or (EsuBft921_3a) or (EsuBft75_29a) or (EsuBft1750_4a) or (EsuBft716_8a) or (EsuBft205_12a) or (EsuBft1160_8a) or (EsuBft953_2a) or (EsuBft276_2a) or (EsuBft1309_2a) or (EsuBft160_20a) or (EsuBft1785_6a) or (EsuBft245_7a) or (EsuBft1031_8a) or (EsuBft353_8a) or (EsuBft1235_6a) or (EsuBft1252_5a) or (EsuBft400_5a) or (EsuBft851_5a) or (EsuBft704_5a) or (EsuBft514_10a) or (EsuBft262_11a) or (EsuBft1578_6a) or (EsuBft1950_4a) or (EsuBft1461_4a) or (EsuBft1646_9a) or (EsuBft680_10a) or (EsuBft1134_7a) or (EsuBft357_9a) or (EsuBft269_9a) or (EsuBft233_8a) or (EsuBft60_27a) or (EsuBft128_22a) or (EsuBft894_15a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Mannosyl9__45__Nacetylglucosaminyl2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Mannosyl8__45__Nacetylglucosaminyl2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MANNOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__114__45__RXN" name="3.2.1.114-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7426</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Mannosyl5__45__N__45__acetyl__45__glucosamine2__45__R_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__N__45__linked__45__Glycan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13559_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__14__45__RXN" name="chitinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01798)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7822 , PWY-6855 , PWY-6902</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHITIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Chitodextrins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__23__45__RXN" name="&amp;beta;-galactosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18607) or (E_subulatus_14852) or (E_subulatus_00876) or (E_subulatus_07881) or (E_subulatus_00877) or (E_subulatus_14853)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Beta__45__D__45__Galactosides_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Non__45__Galactosylated__45__Galactose__45__Acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__galactopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__24__45__RXN" name="alpha mannosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24226) or (E_subulatus_24225) or (E_subulatus_00876) or (E_subulatus_00877) or (E_subulatus_24224)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Alpha__45__D__45__Mannosides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13559_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Non__45__Glycosylated__45__sugar__45__Acceptors_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__25__45__RXN" name="beta-mannosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13878) or (E_subulatus_13882) or (E_subulatus_13884) or (E_subulatus_13881) or (E_subulatus_13879) or (E_subulatus_13883) or (E_subulatus_07881) or (E_subulatus_13880)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Beta__45__D__45__Mannosides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12601_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Non__45__Glycosylated__45__sugar__45__Acceptors_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__38__45__RXN" name="3.2.1.38-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00877) or (E_subulatus_00876) or (E_subulatus_07881)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Beta__45__D__45__fucosides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13293_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Non__45__Fucosylated__45__Fucose__45__Acceptors_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__39__45__RXN" name="3.2.1.39-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07151) or (E_subulatus_01361) or (E_subulatus_19014) or (E_subulatus_03591) or (E_subulatus_01360) or (E_subulatus_24400) or (E_subulatus_19013) or (E_subulatus_02209) or (E_subulatus_07153) or (E_subulatus_07152) or (E_subulatus_00877) or (E_subulatus_02210) or (E_subulatus_00876) or (E_subulatus_21367) or (E_subulatus_07881) or (E_subulatus_14194) or (E_subulatus_14195) or (E_subulatus_20389)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__3__45__beta__45__D__45__Glucans_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__3__45__beta__45__D__45__Glucans_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__58__45__RXN" name="glucan 1,3-&amp;beta;-glucosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05034) or (E_subulatus_05035) or (E_subulatus_05032) or (E_subulatus_12452) or (E_subulatus_06611) or (E_subulatus_12453) or (E_subulatus_06612) or (E_subulatus_12451) or (E_subulatus_05036) or (E_subulatus_05033) or (E_subulatus_06613)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__3__45__beta__45__D__45__Glucans_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__3__45__beta__45__D__45__Glucans_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ALPHA__45__GLUCOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__6__45__RXN" name="glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07151) or (E_subulatus_01361) or (E_subulatus_24400) or (E_subulatus_01360) or (E_subulatus_03591) or (E_subulatus_07153) or (E_subulatus_03589) or (E_subulatus_07152) or (E_subulatus_03590) or (E_subulatus_21367) or (E_subulatus_14194) or (E_subulatus_14195)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Beta__45__D__45__glucan__45__w__45__C__45__3__45__substitution_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Beta__45__D__45__Glucans_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__8__45__RXN" name="endo-1,4-&amp;beta;-xylanase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00381) or (E_subulatus_00380)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6717 , PWY-6784</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__4__45__beta__45__Xylan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__4__45__D__45__xylooligosaccharides_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__2__46__1__46__96__45__RXN" name="3.2.1.96-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20953) or (E_subulatus_20952) or (E_subulatus_20954)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_a__45__glycopeptide__45__D__45__mannosyl__45__Nsup4sup__45__N__45__ace_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_N__45__acetyl__45__D__45__glucosamine__45__asparagine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14375_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__3__46__2__46__10__45__RXN" name="3.3.2.10-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14205)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_epoxides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_glycols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__4__46__14__46__10__45__RXN" name="tripeptidyl-peptidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12832)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Tripeptidyl__45__Peptidase__45__II__45__Substrates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_TRIPEPTIDES_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Peptides__45__holder_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__4__46__14__46__9__45__RXN" name="tripeptidyl-peptidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12832)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Tripeptidyl__45__Peptidase__45__I__45__Substrates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Peptides__45__holder_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TRIPEPTIDES_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__4__46__19__46__12__45__RXN" name="thiol-dependent ubiquitinyl hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20896) or (E_subulatus_14822) or (E_subulatus_14255) or (E_subulatus_13748) or (E_subulatus_16659) or (E_subulatus_11224) or (E_subulatus_23487) or (E_subulatus_19041) or (E_subulatus_21353) or (E_subulatus_23829) or (E_subulatus_11227) or (E_subulatus_10054) or (E_subulatus_23831) or (E_subulatus_23486) or (E_subulatus_14912) or (E_subulatus_23485) or (E_subulatus_04753) or (E_subulatus_13419) or (E_subulatus_19042) or (E_subulatus_17297) or (E_subulatus_07164) or (E_subulatus_11226) or (E_subulatus_20897) or (E_subulatus_17892) or (E_subulatus_07889) or (E_subulatus_13417) or (E_subulatus_21354) or (E_subulatus_20494) or (E_subulatus_02086) or (E_subulatus_23828) or (E_subulatus_16502) or (E_subulatus_23482) or (E_subulatus_17318) or (E_subulatus_23484) or (E_subulatus_17298) or (E_subulatus_16601) or (E_subulatus_17891) or (E_subulatus_19177) or (E_subulatus_17893) or (E_subulatus_16503) or (E_subulatus_17394) or (E_subulatus_22408) or (E_subulatus_11225) or (E_subulatus_13747) or (E_subulatus_20493) or (E_subulatus_20056) or (E_subulatus_15604) or (E_subulatus_19040) or (E_subulatus_13416) or (E_subulatus_23827) or (E_subulatus_22803) or (E_subulatus_00777) or (E_subulatus_20496) or (E_subulatus_17272) or (E_subulatus_14911) or (E_subulatus_09003) or (E_subulatus_23261) or (E_subulatus_15483) or (E_subulatus_19348) or (E_subulatus_07890) or (E_subulatus_14419) or (E_subulatus_23830) or (E_subulatus_20495) or (E_subulatus_23260) or (E_subulatus_21355) or (E_subulatus_21633) or (E_subulatus_16117) or (E_subulatus_02088) or (E_subulatus_19176) or (E_subulatus_23832) or (E_subulatus_23483) or (E_subulatus_13418) or (E_subulatus_13420) or (E_subulatus_02087) or (E_subulatus_19488) or (E_subulatus_14633) or (E_subulatus_05026) or (E_subulatus_23481) or (E_subulatus_02089)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTEIN__45__N__45__UBIQUITYL__45__LYSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Protein__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ubiquitin__45__C__45__Terminal__45__Glycine_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__4__46__21__46__92__45__RXN" name="obsolete endopeptidase Clp" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05417) or (E_subulatus_05416)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_General__45__Protein__45__Substrates_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Peptides__45__holder_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__5__46__1__46__26__45__RXN" name="L-asparaginase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16694) or (E_subulatus_16693)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ASPARAGINE-DEG1-PWY-1</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__ETCETERA__45__L__45__ASPARAGINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__BETA__45__GLUCOSAMINYLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__5__46__1__46__27__45__RXN" name="peptide deformylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16900)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Charged__45__fMET__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__Methionylaminoacyl__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__5__46__1__46__52__45__RXN" name="peptide:N-glycanase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16166)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8541_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_N__45__ACETYL__45__BETA__45__GLUCOSAMINYLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__Aspartates_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__5__46__1__46__88__45__RXN" name="peptide deformylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16900)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FORMYL__45__L__45__METHIONYL__45__PEPTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_METHIONYL__45__PEPTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__5__46__1__46__98__45__RXN" name="histone deacetylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16511) or (E_subulatus_25817) or (E_subulatus_03585) or (E_subulatus_25816) or (E_subulatus_02433) or (E_subulatus_16548) or (E_subulatus_16549) or (E_subulatus_22386) or (E_subulatus_03584) or (E_subulatus_13385) or (E_subulatus_24058) or (E_subulatus_22385) or (E_subulatus_09582) or (E_subulatus_24059) or (E_subulatus_03583) or (E_subulatus_23514) or (E_subulatus_24057) or (E_subulatus_02434) or (E_subulatus_09581) or (E_subulatus_20100) or (E_subulatus_05099) or (E_subulatus_22387) or (E_subulatus_16510) or (E_subulatus_17888) or (E_subulatus_17889)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Histone__45__Acetyl__45__Lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Histone__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__5__46__2__46__17__45__RXN" name="5-hydroxyisourate hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07118)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7849 , PWY-5691 , PWY-7394</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__HYDROXYISOURATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5821_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__1__46__19__45__RXN" name="3.6.1.19-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft244_7a) or (EsuBft125_4a) or (EsuBft40_14a) or (EsuBft1127_4a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Nucleoside__45__Triphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Nucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__1__45__RXN" name="phospholipid-translocating ATPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10624) or (E_subulatus_02432) or (E_subulatus_00948) or (E_subulatus_00364) or (E_subulatus_19023) or (E_subulatus_02932) or (E_subulatus_19024) or (E_subulatus_02935) or (E_subulatus_02934) or (E_subulatus_19026) or (E_subulatus_00365) or (E_subulatus_02933) or (E_subulatus_16029) or (E_subulatus_19025) or (E_subulatus_00956) or (E_subulatus_00947)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Phospholipids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Phospholipids_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__16__45__RXN" name="ATPase-coupled arsenite transmembrane transporter" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21795)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4621</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__763_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__763_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__23__45__RXN" name="oligopeptide-transporting ATPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14164) or (E_subulatus_00707)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OLIGOPEPTIDES_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OLIGOPEPTIDES_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__35__45__RXN" name="manganese-transporting ATPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10718) or (E_subulatus_10721) or (E_subulatus_10722) or (E_subulatus_10720) or (E_subulatus_10719)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MN__43__2_e" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MN__43__2_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__41__45__RXN" name="heme-transporting ATPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16484) or (E_subulatus_16483)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Heme__45__b_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Heme__45__b_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__43__45__RXN" name="peptide-transporting ATPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07471) or (E_subulatus_14708) or (E_subulatus_07472)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Peptides__45__holder_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Peptides__45__holder_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__44__45__RXN" name="3.6.3.44-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02294) or (E_subulatus_17137) or (E_subulatus_02292) or (E_subulatus_02295) or (E_subulatus_02293) or (E_subulatus_07614) or (E_subulatus_17138)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Xenobiotic_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Xenobiotic_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__6__45__RXN" name="H+-ATPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16692) or (E_subulatus_16689) or (E_subulatus_13008) or (E_subulatus_16691) or (E_subulatus_16690)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__8__45__RXN" name="3.6.3.8-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft2482_3a) or (EsuBft448_13a) or (EsuBft2482_2a) or (EsuBft225_2a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CA__43__2_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_e" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CA__43__2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__3__46__9__45__RXN" name="sodium:potassium-exchanging ATPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02428) or (E_subulatus_13804) or (E_subulatus_20177)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_K__43___e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NA__43___c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_K__43___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NA__43___e" stoichiometry="3" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__4__46__3__45__RXN" name="microtubule-severing ATPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09854) or (E_subulatus_09855) or (E_subulatus_09853) or (E_subulatus_20524)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Microtubules_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Tubulin__45__Heterodimers_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__4__46__4__45__RXN" name="ATP-dependent microtubule motor activity, plus-end-directed" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16427) or (E_subulatus_24395) or (E_subulatus_13638) or (E_subulatus_25491) or (E_subulatus_15504) or (E_subulatus_12495) or (E_subulatus_25492) or (E_subulatus_19444) or (E_subulatus_10428) or (E_subulatus_00169) or (E_subulatus_16426) or (E_subulatus_24007) or (E_subulatus_16428) or (E_subulatus_16457) or (E_subulatus_04865) or (E_subulatus_03260) or (E_subulatus_03261) or (E_subulatus_22705) or (E_subulatus_13639) or (E_subulatus_04864) or (E_subulatus_12494) or (E_subulatus_12493)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Kinesin__45__Microtubules__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Kinesin__45__Microtubules__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3__46__6__46__4__46__5__45__RXN" name="ATP-dependent microtubule motor activity, minus-end-directed" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16428) or (E_subulatus_16457) or (E_subulatus_21545) or (E_subulatus_21548) or (E_subulatus_01062) or (E_subulatus_16427) or (E_subulatus_22705) or (E_subulatus_16426) or (E_subulatus_04987)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Kinesin__45__Microtubules__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Kinesin__45__Microtubules__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_325__45__BISPHOSPHATE__45__NUCLEOTIDASE__45__RXN" name="3&apos;(2&apos;),5&apos;-bisphosphate nucleotidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07563) or (E_subulatus_07696) or (E_subulatus_05309) or (E_subulatus_07565) or (E_subulatus_05310) or (E_subulatus_07562) or (E_subulatus_07561) or (E_subulatus_07564)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_35__45__CYCLIC__45__GMP__45__PHOSPHODIESTERASE__45__RXN" name="35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11152)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CGMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_3PGAREARR__45__RXN" name="phosphoglycerate mutase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11809) or (E_subulatus_14260) or (E_subulatus_23640) or (E_subulatus_01110) or (E_subulatus_01979) or (E_subulatus_09341) or (E_subulatus_11810)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5723 , P124-PWY , PWY-1042 , ANAGLYCOLYSIS-PWY , PWY-5484 , GLYCOLYSIS , P341-PWY , PWY-6901 , PWY-7218 , PWY-7003 , PWY-6142 , GLUCONEO-PWY , PWY-6886 , PWY-2221 , PWY-7124</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__PG_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_G3P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__45__COUMARATE__45____45__COA__45__LIGASE__45__RXN" name="4-COUMARATE--COA-LIGASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21143)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-361 , PWY-6320 , PWY-7398 , PWY-5135 , PWY-7046 , PWY1F-FLAVSYN , PWY-5048 , PWY-8002 , PWY-7897 , PWY-6982 , PWY-6920 , PWY-6435 , PWY-7397</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_COUMARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_P__45__COUMAROYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__45__HYDROXY__45__2__45__KETOPIMELATE__45__LYSIS__45__RXN" name="4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15873)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__804_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SUCC__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__45__HYDROXYPHENYLPYRUVATE__45__DIOXYGENASE__45__RXN" name="4-hydroxyphenylpyruvate dioxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04651)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1581 , TYRFUMCAT-PWY , PWY-1422</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_P__45__HYDROXY__45__PHENYLPYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HOMOGENTISATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__45__NITROPHENYLPHOSPHATASE__45__RXN" name="nitrophenyl phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18352) or (E_subulatus_04656) or (E_subulatus_24322) or (E_subulatus_15091) or (E_subulatus_18354) or (E_subulatus_06630) or (E_subulatus_15089) or (E_subulatus_24323) or (E_subulatus_22048) or (E_subulatus_10777) or (E_subulatus_02491) or (E_subulatus_18351) or (E_subulatus_10776) or (E_subulatus_02492) or (E_subulatus_20634) or (E_subulatus_15090) or (E_subulatus_22047) or (E_subulatus_02489) or (E_subulatus_18108) or (E_subulatus_18353) or (E_subulatus_15092) or (E_subulatus_02488) or (E_subulatus_21678) or (E_subulatus_18129) or (E_subulatus_18128) or (E_subulatus_03152) or (E_subulatus_02490) or (E_subulatus_02493) or (E_subulatus_18109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__194_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_P__45__NITROPHENOL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__46__2__46__1__46__58__45__RXN" name="(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971 , PWY-7388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Beta__45__3__45__hydroxybutyryl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Crotonyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__46__2__46__1__46__59__45__RXN" name="(3R)-3-hydroxyoctanoyl-[acyl-carrier protein] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__Hydroxy__45__octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__Octenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__46__2__46__1__46__61__45__RXN" name="(3R)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__Hydroxypalmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__Hexadecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__46__2__46__99__46__18__45__RXN" name="DNA-AP site lyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21315) or (E_subulatus_21312) or (E_subulatus_21316) or (E_subulatus_21313) or (E_subulatus_21314) or (E_subulatus_21317)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DNA__45__containing__45__abasic__45__Sites_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__Phospho__45__terminated__45__DNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__terminal__45__unsaturated__45__sugars_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__46__3__46__1__46__16__45__RXN" name="L-threo-3-hydroxy aspartate dehydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05630) or (E_subulatus_08899) or (E_subulatus_05629)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THREO__45__3__45__HYDROXY__45__L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__46__3__46__1__46__17__45__RXN" name="L-serine deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05630) or (E_subulatus_08899) or (E_subulatus_05629)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4__46__4__46__1__46__14__45__RXN" name="4.4.1.14-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04784)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: ETHYL-PWY , PWY-7270</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__METHYLTHIOADENOSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__68_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_4OHBENZOATE__45__OCTAPRENYLTRANSFER__45__RXN" name="4-hydroxybenzoate octaprenyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12511) or (E_subulatus_12512) or (E_subulatus_19962) or (E_subulatus_09512) or (E_subulatus_08023) or (E_subulatus_12510)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5870 , PWY-6708</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OCTAPRENYL__45__DIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_4__45__hydroxybenzoate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__OCTAPRENYL__45__4__45__HYDROXYBENZOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__45__FORMYL__45__THF__45__CYCLO__45__LIGASE__45__RXN" name="5-FORMYL-THF-CYCLO-LIGASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-3841 , 1CMET2-PWY , PWY-2201</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N5__45__Formyl__45__THF__45__Glu__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__10__45__METHENYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__45__METHYLTHIORIBOSE__45__KINASE__45__RXN" name="MTR kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18722) or (E_subulatus_02600) or (E_subulatus_16308)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6754</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__560_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__444_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__45__NUCLEOTID__45__RXN" name="5&apos;-nucleotidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13217) or (E_subulatus_17313) or (E_subulatus_02463) or (E_subulatus_02465) or (E_subulatus_17477) or (E_subulatus_10902) or (E_subulatus_10901) or (E_subulatus_17314) or (E_subulatus_02464)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ribonucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ribonucleosides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__45__OXOPROLINASE__45__ATP__45__HYDROLYSING__45__RXN" name="5-oxoprolinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24861) or (E_subulatus_14679) or (E_subulatus_24860) or (E_subulatus_14681) or (E_subulatus_14680)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7942 , PWY-4041</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__OXOPROLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__46__1__46__1__46__18__45__RXN" name="serine racemase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05630) or (E_subulatus_05629) or (E_subulatus_08899)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6196 , PWY-6455</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__SERINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__46__3__46__1__46__23__45__RXN" name="5-methylthioribose-1-phosphate isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03024) or (E_subulatus_01607) or (E_subulatus_03023) or (E_subulatus_01606) or (E_subulatus_01608) or (E_subulatus_01609) or (E_subulatus_01605) or (E_subulatus_16207)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7174 , PWY-4361</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__444_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__1063_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__46__3__46__3__46__14__45__RXN" name="5.3.3.14-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY0-862</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Trans__45__D2__45__decenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Cis__45__delta__45__3__45__decenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__46__3__46__4__46__1__45__RXN" name="protein disulfide isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17536) or (E_subulatus_13357) or (E_subulatus_19754) or (E_subulatus_23834) or (E_subulatus_14295) or (E_subulatus_16661) or (E_subulatus_14009) or (E_subulatus_14008) or (E_subulatus_13356) or (E_subulatus_23836) or (E_subulatus_02689) or (E_subulatus_14006) or (E_subulatus_09785) or (E_subulatus_16662) or (E_subulatus_09786) or (E_subulatus_23835) or (E_subulatus_02339) or (E_subulatus_13631) or (E_subulatus_23833) or (E_subulatus_14007) or (E_subulatus_14294) or (E_subulatus_02688) or (E_subulatus_19753) or (E_subulatus_17537) or (E_subulatus_12650) or (E_subulatus_14010)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Proteins__45__with__45__incorrect__45__disulfides_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Proteins__45__with__45__correct__45__disulfides_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__46__99__46__1__46__2__45__RXN" name="DNA topoisomerase type I" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20442) or (E_subulatus_16129) or (E_subulatus_03698) or (E_subulatus_10555) or (E_subulatus_14080) or (E_subulatus_23335) or (E_subulatus_12414) or (E_subulatus_23338) or (E_subulatus_03699) or (E_subulatus_14698) or (E_subulatus_05057) or (E_subulatus_05543) or (E_subulatus_10556) or (E_subulatus_10557) or (E_subulatus_08261) or (E_subulatus_05058) or (E_subulatus_05059) or (E_subulatus_16128) or (E_subulatus_23336) or (E_subulatus_23337)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Negatively__45__super__45__coiled__45__DNAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Relaxed__45__DNAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_5__46__99__46__1__46__3__45__RXN" name="DNA topoisomerase type II (ATP-hydrolyzing)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08261) or (E_subulatus_17599) or (E_subulatus_13382) or (E_subulatus_21548) or (E_subulatus_13383) or (E_subulatus_05543) or (E_subulatus_15783) or (E_subulatus_07855)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Double__45__Stranded__45__DNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Negatively__45__super__45__coiled__45__DNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_6__45__PHOSPHOFRUCTO__45__2__45__KINASE__45__RXN" name="fructose-6P, 2 kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19077) or (E_subulatus_16329) or (E_subulatus_24377) or (E_subulatus_04274) or (E_subulatus_04275) or (E_subulatus_16330) or (E_subulatus_18542) or (E_subulatus_19074) or (E_subulatus_16328) or (E_subulatus_24378) or (E_subulatus_19075) or (E_subulatus_19076)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-423</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__535_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_6__46__2__46__1__46__34__45__RXN" name="6.2.1.34-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21143)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-1121 , PWY-6343</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FERULIC__45__ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERULOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_6__46__3__46__2__46__25__45__RXN" name="6.3.2.25-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24895) or (E_subulatus_24892) or (E_subulatus_24893) or (E_subulatus_24894)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Detyrosinated__45__alpha__45____45__tubulins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TYR_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Alpha__45__tubulins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_6__46__3__46__5__46__7__45__RXN" name="glutamyl-tRNA(Gln) amidotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12413)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__glutamyl__45__tRNAGln_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Charged__45__GLN__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_6PFRUCTPHOS__45__RXN" name="6-phosphofructokinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12441) or (E_subulatus_11499) or (E_subulatus_11500) or (E_subulatus_12443) or (E_subulatus_12444) or (E_subulatus_12442) or (E_subulatus_18454)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1042 , ANAGLYCOLYSIS-PWY , GLYCOLYSIS , PWY-5484 , PWY-1861 , PWY-7385</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FRUCTOSE__45__16__45__DIPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_6PGLUCONDEHYDROG__45__RXN" name="phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05762) or (E_subulatus_09945) or (E_subulatus_02177) or (E_subulatus_02178) or (E_subulatus_20831)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: P122-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__2961_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RIBULOSE__45__5P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_6PGLUCONOLACT__45__RXN" name="6-phosphogluconolactonase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02576)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: RUMP-PWY , OXIDATIVEPENT-PWY , GLYCOLYSIS-E-D , P122-PWY , PWY-8004</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__6__45__P__45__GLUCONO__45__DELTA__45__LACTONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__2961_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_7KAPSYN__45__RXN" name="7KAPSYN-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15035)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6578</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__558_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_8__45__AMINO__45__7__45__OXONONANOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETATE__45____45__COA__45__LIGASE__45__RXN" name="acetyl-CoA synthetase (AMP-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10759) or (E_subulatus_10760)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-21 , PWY66-161 , PWY0-1313 , PWY-6672 , PWY66-162 , PWY-7118</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETOLACTREDUCTOISOM__45__RXN" name="(2R)-2,3-dihydroxy-3-methylbutanoate:NADP+ oxidoreductase (isomerizing)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21979) or (E_subulatus_11005) or (E_subulatus_21980) or (E_subulatus_18066)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: VALSYN-PWY , PWY-7111</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__ACETO__45__LACTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13357_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETOLACTSYN__45__RXN" name="ACETOLACTSYN-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5939 , PWY-5938 , PWY-6389 , VALSYN-PWY , PWY-7111</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__ACETO__45__LACTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETOOHBUTREDUCTOISOM__45__RXN" name="(R)-2,3-dihydroxy-3-methylpentanoate:NADP+ oxidoreductase (isomerizing)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21979) or (E_subulatus_11005) or (E_subulatus_21980) or (E_subulatus_18066)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ILEUSYN-PWY , PWY-5103</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__ACETO__45__2__45__HYDROXY__45__BUTYRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__KETO__45__2__45__METHYLVALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETOOHBUTSYN__45__RXN" name="ACETOOHBUTSYN-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: ILEUSYN-PWY , PWY-5103 , PWY-5104 , PWY-5101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__OXOBUTANOATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__ACETO__45__2__45__HYDROXY__45__BUTYRATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETYL__45__COA__45__ACETYLTRANSFER__45__RXN" name="acetyl-CoA acetyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15293) or (E_subulatus_15294) or (E_subulatus_23204)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6863 , P163-PWY , PWY-6883 , PWY66-367 , PWY-7778 , PWY-7401 , PWY1-3 , PWY-6876 , PWY-6588 , PWY-922 , CENTFERM-PWY , PWY66-368 , PWY-7779 , ACETOACETATE-DEG-PWY , PWY-5177 , P162-PWY , PWY-5789 , PWY-7216 , PWY-6583 , PWY-7391 , PWY-7524 , PWY-5741 , PWY-6174 , PWY-5676</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETOACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETYL__45__COA__45__CARBOXYLTRANSFER__45__RXN" name="acetyl-CoA carboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09247) or (E_subulatus_22691) or (E_subulatus_05706) or (E_subulatus_09248)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6679 , PWY-7388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETYLGLUTKIN__45__RXN" name="acetylglutamate kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19234)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: GLUTORN-PWY , PWY-5154 , ARGSYNBSUB-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__GLU_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_N__45__ACETYL__45__GLUTAMYL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETYLORNDEACET__45__RXN" name="ACETYLORNDEACET-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03965) or (E_subulatus_18182)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: GLUTORN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__ALPHA__45__ACETYLORNITHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__ORNITHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACETYLORNTRANSAM__45__RXN" name="N-acetylornithine aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20725)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLUTORN-PWY , PWY-5154 , ARGSYNBSUB-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__ALPHA__45__ACETYLORNITHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__469_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACID__45__PHOSPHATASE__45__RXN" name="acid phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24710) or (E_subulatus_01143) or (E_subulatus_24579) or (E_subulatus_04656) or (E_subulatus_08878) or (E_subulatus_20190) or (E_subulatus_09245) or (E_subulatus_24578) or (E_subulatus_18108) or (E_subulatus_20191) or (E_subulatus_23099) or (E_subulatus_09244) or (E_subulatus_01144) or (E_subulatus_01145) or (E_subulatus_21678) or (E_subulatus_22769) or (E_subulatus_24580) or (E_subulatus_03152) or (E_subulatus_09246) or (E_subulatus_18109)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6348</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Orthophosphoric__45__Monoesters_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Alcohols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACONITATEDEHYDR__45__RXN" name="citrate hydro-lyase (cis-aconitate-forming)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20171)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P105-PWY , PWY-6969 , PWY-7124 , FERMENTATION-PWY , PWY-5690 , GLYOXYLATE-BYPASS , PWY66-398 , PWY-5392 , PWY-7254 , PWY-5913 , PWY-6728 , TCA , P23-PWY , REDCITCYC , PWY-6549</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CIT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CIS__45__ACONITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACONITATEHYDR__45__RXN" name="cis-aconitate hydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20171)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P105-PWY , PWY-6969 , PWY-7124 , FERMENTATION-PWY , PWY-5690 , PWY66-398 , GLYOXYLATE-BYPASS , PWY-5392 , PWY-7254 , PWY-5913 , PWY-6728 , TCA , P23-PWY , REDCITCYC , PWY-6549</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CIS__45__ACONITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THREO__45__DS__45__ISO__45__CITRATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACP__45__S__45__ACETYLTRANSFER__45__RXN" name="S-acetyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13005) or (E_subulatus_08948) or (E_subulatus_15038) or (E_subulatus_24809) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5966 , FASYN-INITIAL-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACSERLY__45__RXN" name="O-acetylserine sulfhydrylase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06191) or (E_subulatus_06192) or (E_subulatus_06194) or (E_subulatus_06193) or (E_subulatus_00981) or (E_subulatus_06195) or (E_subulatus_06197) or (E_subulatus_06196)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: CYSTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYLSERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACYL__45__COA__45__HYDROLASE__45__RXN" name="acyl-CoA thioesterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21799) or (E_subulatus_16883) or (E_subulatus_16882)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACYL__45__COA__45__OXIDASE__45__RXN" name="ACYL-COA-OXIDASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft185_8a) or (EsuBft256_7a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7007</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_TRANS__45__D2__45__ENOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACYLCOADEHYDROG__45__RXN" name="acyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_12413) or (E_subulatus_17420) or (E_subulatus_21544) or (E_subulatus_23466) or (E_subulatus_11080) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: FAO-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Saturated__45__Fatty__45__Acyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_TRANS__45__D2__45__ENOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ACYLCOASYN__45__RXN" name="2,3,4-saturated fatty acyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-391 , FAO-PWY , PWY-7288 , PWY-5136</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD66__45__39_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Saturated__45__Fatty__45__Acyl__45__CoA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADCLY__45__RXN" name="ADCLY-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12552)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6543</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_4__45__AMINO__45__4__45__DEOXYCHORISMATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_P__45__AMINO__45__BENZOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADDALT__45__RXN" name="deoxyadenosine deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10339) or (E_subulatus_21946) or (E_subulatus_10338) or (E_subulatus_21945)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7179-1 , PWY-7179</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DEOXYADENOSINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DEOXYINOSINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADENODEAMIN__45__RXN" name="adenosine deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21945) or (E_subulatus_21946) or (E_subulatus_10338) or (E_subulatus_10339)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6611 , PWY-6609 , SALVADEHYPOX-PWY , PWY0-1296</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADENOSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INOSINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADENOSINE__45__KINASE__45__RXN" name="adenosine kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13739)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6619</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADENOSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADENOSYLHOMOCYSTEINASE__45__RXN" name="adenosylhomocysteinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22943)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: METHIONINE-DEG1-PWY , PWY-5041</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADENPRIBOSYLTRAN__45__RXN" name="adenine phosphoribosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11708) or (E_subulatus_11704) or (E_subulatus_11706) or (E_subulatus_11705) or (E_subulatus_11709) or (E_subulatus_11707)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: P121-PWY , PWY-6605 , PWY-6610 , PWY-7807 , PWY-7805</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADENINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRPP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADENYL__45__KIN__45__RXN" name="adenylate kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09987) or (E_subulatus_10264) or (E_subulatus_10265) or (E_subulatus_13739) or (E_subulatus_25782) or (E_subulatus_25785) or (E_subulatus_15295) or (E_subulatus_24493) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_25784) or (E_subulatus_16162) or (E_subulatus_24951) or (E_subulatus_13579) or (E_subulatus_24952) or (E_subulatus_13580) or (E_subulatus_24953) or (E_subulatus_25783)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7219</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADENYLOSUCCINATE__45__SYNTHASE__45__RXN" name="adenylosuccinate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17722) or (E_subulatus_17721) or (E_subulatus_17723) or (E_subulatus_13049) or (E_subulatus_13050)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7219</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_IMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ADENYLOSUCC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADENYLYLSULFATASE__45__RXN" name="adenylylsulfate sulfohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20639) or (E_subulatus_20640)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_APS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_SULFATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADENYLYLSULFATE__45__REDUCTASE__45__RXN" name="ADENYLYLSULFATE-REDUCTASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: P224-PWY , DISSULFRED-PWY , PWY-5279 , PWY-5278</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_APS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADENYLYLSULFKIN__45__RXN" name="adenylyl-sulfate kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25391) or (E_subulatus_22149) or (E_subulatus_22148)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5340</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_APS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADPREDUCT__45__RXN" name="ADP reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16358) or (E_subulatus_11791) or (E_subulatus_15745) or (E_subulatus_25204) or (E_subulatus_16363) or (E_subulatus_20463) or (E_subulatus_16359) or (E_subulatus_17310) or (E_subulatus_20465) or (E_subulatus_17311) or (E_subulatus_16362) or (E_subulatus_15746) or (E_subulatus_15977) or (E_subulatus_17312) or (E_subulatus_17309) or (E_subulatus_25205) or (E_subulatus_07744) or (E_subulatus_07745) or (E_subulatus_18208) or (E_subulatus_16360) or (E_subulatus_16361) or (E_subulatus_20464)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7220 , PWY-7227</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ADPSUGPPHOSPHAT__45__RXN" name="ADP-sugar diphosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09770) or (E_subulatus_01494) or (E_subulatus_09769) or (E_subulatus_01493) or (E_subulatus_05076) or (E_subulatus_18590) or (E_subulatus_18628) or (E_subulatus_01497) or (E_subulatus_01496) or (E_subulatus_09771) or (E_subulatus_19225) or (E_subulatus_01495) or (E_subulatus_01498)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADP__45__SUGARS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Alpha__45__D__45__aldose__45__1__45__phosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AGMATINE__45__DEIMINASE__45__RXN" name="agmatine deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03927) or (E_subulatus_03928)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-43 , ARGDEG-III-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AGMATHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__597_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AICARSYN__45__RXN" name="5&apos;-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00370)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6123 , PWY-7234 , PWY-6124</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_P__45__RIBOSYL__45__4__45__SUCCCARB__45__AMINOIMIDAZOLE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AICAR_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AICARTRANSFORM__45__RXN" name="AICAR transformylase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23472)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6123 , PWY-6124</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FORMYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AICAR_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHORIBOSYL__45__FORMAMIDO__45__CARBOXAMIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AIRCARBOXY__45__RXN" name="phosphoribosylaminoimidazole carboxylase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03470) or (E_subulatus_03469)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6124</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHORIBOSYL__45__CARBOXY__45__AMINOIMIDAZOLE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__PHOSPHORIBOSYL__45__5__45__AMINOIMIDAZOLE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AIRS__45__RXN" name="phosphoribosylformylglycinamidine cyclo-ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14591)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6122 , PWY-6121 , PWY-6277</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__PHOSPHORIBOSYL__45__N__45__FORMYLGLYCINEAMIDINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__PHOSPHORIBOSYL__45__5__45__AMINOIMIDAZOLE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALANINE__45____45__GLYOXYLATE__45__AMINOTRANSFERASE__45__RXN" name="serine--pyruvate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20725) or (E_subulatus_18435) or (E_subulatus_06213)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: GLYSYN-ALA-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLYOX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALANINE__45____45__TRNA__45__LIGASE__45__RXN" name="alanine&amp;mdash;tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18802) or (E_subulatus_20327) or (E_subulatus_12129) or (E_subulatus_12130) or (E_subulatus_22872)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ALA__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__ALA__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALANINE__45__AMINOTRANSFERASE__45__RXN" name="glutamate&amp;mdash;pyruvate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16384) or (E_subulatus_16050) or (E_subulatus_16382) or (E_subulatus_20106) or (E_subulatus_06213) or (E_subulatus_16385) or (E_subulatus_16383)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7383 , PWY-7115 , ALACAT2-PWY , PWY-7117 , ALANINE-DEG3-PWY , ALANINE-SYN2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALCOHOL__45__DEHYDROG__45__RXN" name="ALCOHOL-DEHYDROG-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY66-21 , PWY-5480 , PWY-6587 , FERMENTATION-PWY , P122-PWY , PWY-5486 , P161-PWY , PWY-6333 , PWY4LZ-257 , PWY-7118 , ETOH-ACETYLCOA-ANA-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ETOH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALCOHOL__45__DEHYDROGENASE__45__NADP__43____45__RXN" name="alcohol dehydrogenase (NADP+)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03981) or (E_subulatus_04997) or (E_subulatus_02174) or (E_subulatus_03982) or (E_subulatus_04999) or (E_subulatus_16044) or (E_subulatus_03980) or (E_subulatus_16048) or (E_subulatus_16049) or (E_subulatus_23526) or (E_subulatus_16047) or (E_subulatus_02173) or (E_subulatus_04998) or (E_subulatus_16046) or (E_subulatus_16045) or (E_subulatus_02175) or (E_subulatus_02945)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Alcohols_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALCOHOL__45__DEHYDROGENASE__45__NADPORNOP__43____45__RXN" name="aldehyde reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04997) or (E_subulatus_03981) or (E_subulatus_03982) or (E_subulatus_02174) or (E_subulatus_03980) or (E_subulatus_16044) or (E_subulatus_04999) or (E_subulatus_16048) or (E_subulatus_16049) or (E_subulatus_23526) or (E_subulatus_16047) or (E_subulatus_16045) or (E_subulatus_04998) or (E_subulatus_02173) or (E_subulatus_16046) or (E_subulatus_02175) or (E_subulatus_02945)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Alcohols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALDEHYDE__45__DEHYDROGENASE__45__NADORNOP__43____45__RXN" name="ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23526)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALDEHYDE__45__DEHYDROGENASE__45__NADP__43____45__RXN" name="aldehyde dehydrogenase [NAD(P)+]" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23526)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7269</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALDHDEHYDROG__45__RXN" name="aldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_18015) or (E_subulatus_00192) or (E_subulatus_03415) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7269</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALDOSE__45__1__45__EPIMERASE__45__RXN" name="ALDOSE-1-EPIMERASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft395_6a) or (E_subulatus_15923)</p>
            <p>CATEGORIES: ORTHOLOGY and MANUAL</p>
            <p>SUBSYSTEM: PWY0-1466</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ALPHA__45__GLUCOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLC_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALDOSE1EPIM__45__RXN" name="ALDOSE1EPIM-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6317 , PWY66-422</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GALACTOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ALPHA__45__D__45__GALACTOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALKANE__45__1__45__MONOOXYGENASE__45__RXN" name="alkane hydroxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16192)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P221-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__148_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__Rubredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OCTANOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__Rubredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALKYLGLYCERONE__45__PHOSPHATE__45__SYNTHASE__45__RXN" name="alkylglycerone-phosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16759)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7782</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__415_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Long__45__chain__45__alcohols_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__ALKYL__45__GLYCERONE__45__3__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Long__45__Chain__45__Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALLANTOICASE__45__RXN" name="allantoicase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09258)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5697</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ALLANTOATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UREA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1091_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALLANTOINASE__45__RXN" name="ALLANTOINASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5697 , PWY-5698</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ALLANTOIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ALLANTOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALPHA__45__L__45__FUCOSIDASE__45__RXN" name="&amp;alpha; fucosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10683) or (E_subulatus_10682)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AN__45__ALPHA__45__L__45__FUCOSIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Alcohols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__Fucopyranoses_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ALPHAGALACTOSID__45__RXN" name="&amp;alpha;-galactosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20390) or (E_subulatus_17187) or (E_subulatus_01137)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1301</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MELIBIOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__galactopyranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AMACETOXID__45__RXN" name="primary amine oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11639) or (E_subulatus_19483) or (E_subulatus_14646) or (E_subulatus_19482) or (E_subulatus_13120) or (E_subulatus_14645) or (E_subulatus_11640) or (E_subulatus_14644)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: THRDLCTCAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMINO__45__ACETONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_METHYL__45__GLYOXAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AMINEOXID__45__RXN" name="Aliphatic-amine oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11639) or (E_subulatus_19483) or (E_subulatus_19482) or (E_subulatus_14646) or (E_subulatus_13120) or (E_subulatus_14645) or (E_subulatus_11640) or (E_subulatus_14644)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Aliphatic__45__Amines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AMINEPHEN__45__RXN" name="primary amine oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11639) or (E_subulatus_19483) or (E_subulatus_14646) or (E_subulatus_19482) or (E_subulatus_13120) or (E_subulatus_14645) or (E_subulatus_11640) or (E_subulatus_14644)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: 2PHENDEG-PWY , PWY-5751</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHENYLETHYLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHENYLACETALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AMINOACYLASE__45__RXN" name="aminoacylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18185) or (E_subulatus_07947) or (E_subulatus_18183) or (E_subulatus_00324) or (E_subulatus_18182) or (E_subulatus_18184)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__Acylated__45__Aliphatic__45__Amino__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Aliphatic__45__L__45__Amino__45__Acids_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AMINOCYL__45__TRNA__45__HYDROLASE__45__RXN" name="aminoacyl-tRNA hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21087) or (E_subulatus_02644) or (E_subulatus_21090) or (E_subulatus_04210) or (E_subulatus_02642) or (E_subulatus_02643) or (E_subulatus_04209) or (E_subulatus_21088) or (E_subulatus_21089)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__Substituted__45__Aminoacyl__45__tRNA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__Substituted__45__Amino__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AMP__45__DEAMINASE__45__RXN" name="AMP deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24263) or (E_subulatus_24262) or (E_subulatus_05395)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6596</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_IMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AMP__45__DEPHOSPHORYLATION__45__RXN" name="5&apos;-nucleotidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13217) or (E_subulatus_17313) or (E_subulatus_02463) or (E_subulatus_02465) or (E_subulatus_17477) or (E_subulatus_10902) or (E_subulatus_10901) or (E_subulatus_17314) or (E_subulatus_02464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: SALVADEHYPOX-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AMPSYN__45__RXN" name="adenylosuccinate lyase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00370)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7219</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADENYLOSUCC_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AMYGDALIN__45__BETA__45__GLUCOSIDASE__45__RXN" name="amygdalin hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07881)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6011</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1125_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__553_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ANTHRANSYN__45__RXN" name="ANTHRANSYN-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6661 , PWY-6660 , PWY-5958 , TRPSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHORISMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ANTHRANILATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_APIGNAR__45__RXN" name="Naringenin chalcone isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12873) or (E_subulatus_16597)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY1F-FLAVSYN , PWY-6787 , PWY-7897 , PWY-7397</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__20012_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NARINGENIN__45__CMPD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARACHIDONATE__45__5__45__LIPOXYGENASE__45__RXN" name="arachidonate 5-lipoxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05196) or (E_subulatus_05195)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-375</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ARACHIDONIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_6E8Z11Z14Z__45__5S__45__5__45__HYDROPEROXYCOSA__45__6_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARG__45__OXIDATION__45__RXN" name="ARG-OXIDATION-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft45_39a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: ARGDEG-IV-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ARG_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__824_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARGDECARBOX__45__RXN" name="arginine decarboxylase, biosynthetic" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13478) or (E_subulatus_13481) or (E_subulatus_13476) or (E_subulatus_13475) or (E_subulatus_13479) or (E_subulatus_13480) or (E_subulatus_13477)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6305 , PWY-6834 , PWY-40 , PWY0-823 , ARGDEG-III-PWY , PWY-43 , PWY0-1299</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ARG_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AGMATHINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARGINASE__45__RXN" name="arginase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03337) or (E_subulatus_17610)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: ARGASEDEG-PWY , PWY-6305 , ARG-PRO-PWY , ARG-GLU-PWY , PWY-6922 , CITRULBIO-PWY , PWY-4984</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ARG_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UREA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ORNITHINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARGININE__45____45__TRNA__45__LIGASE__45__RXN" name="arginine-tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11512) or (E_subulatus_11040) or (E_subulatus_11041) or (E_subulatus_07098)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ARG__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ARG_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__ARG__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARGINYLTRANSFERASE__45__RXN" name="arginyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21145)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_General__45__Protein__45__Substrates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Charged__45__ARG__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ARG__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__N__45__terminal__45__L__45__Arginine_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARGSUCCINLYA__45__RXN" name="argininosuccinate lyase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05554)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: ARGSYN-PWY , PWY-7400 , PWY-4983 , PWY-4984 , PWY-5154 , ARGSYNBSUB-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ARGININO__45__SUCCINATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ARG_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARGSUCCINSYN__45__RXN" name="argininosuccinate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21292) or (E_subulatus_21293)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: ARGSYN-PWY , PWY-7400 , PWY-4983 , PWY-4984 , PWY-5154 , ARGSYNBSUB-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__CITRULLINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ARGININO__45__SUCCINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_AROMATIC__45__L__45__AMINO__45__ACID__45__DECARBOXYLASE__45__RXN" name="aromatic-L-amino-acid decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01359)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3181 , PWY-5877 , PWY-5290 , PWY-581 , PWY-7936 , PWY-6307 , PWY-5473</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TRP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TRYPTAMINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARYL__45__SULFOTRANSFERASE__45__RXN" name="phenol sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_00494) or (E_subulatus_06138) or (E_subulatus_08626) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Phenols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Aryl__45__sulfates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ARYLSULFAT__45__RXN" name="sulfuric ester hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12932) or (E_subulatus_22045) or (E_subulatus_12575) or (E_subulatus_22019) or (E_subulatus_24411) or (E_subulatus_04812) or (E_subulatus_12202) or (E_subulatus_18924) or (E_subulatus_22009) or (E_subulatus_03034) or (E_subulatus_04172) or (E_subulatus_01732) or (E_subulatus_24412) or (E_subulatus_03035) or (E_subulatus_12201) or (E_subulatus_22046) or (E_subulatus_16163) or (E_subulatus_22010) or (E_subulatus_16373) or (E_subulatus_01731) or (E_subulatus_11258) or (E_subulatus_03033) or (E_subulatus_03036) or (E_subulatus_24410) or (E_subulatus_22008)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Aryl__45__sulfates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Phenols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SULFATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ASNSYNA__45__RXN" name="asparagine synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00581) or (E_subulatus_15542) or (E_subulatus_09531) or (E_subulatus_09532) or (E_subulatus_15541) or (E_subulatus_00580)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ASPARAGINESYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ASNSYNB__45__RXN" name="L-aspartate:L-glutamine amido-ligase (AMP-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00581) or (E_subulatus_15542) or (E_subulatus_09531) or (E_subulatus_09532) or (E_subulatus_15541) or (E_subulatus_00580)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: ASPARAGINE-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ASPAMINOTRANS__45__RXN" name="aspartate transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02206) or (E_subulatus_16058)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7383 , ASPARTATESYN-PWY , MALATE-ASPARTATE-SHUTTLE-PWY , PWY-7115 , ASPARTATE-DEG1-PWY , ASPARAGINE-DEG1-PWY-1 , PWY-7117 , PWY-5913 , GLUTDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ASPARAGHYD__45__RXN" name="asparaginase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13048) or (E_subulatus_13047) or (E_subulatus_13046) or (E_subulatus_13045)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ASPARAGINE-DEG1-PWY , ASPASN-PWY , ASPARAGINE-DEG1-PWY-1</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASN_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ASPARAGINE__45____45__TRNA__45__LIGASE__45__RXN" name="asparagine-tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00557) or (E_subulatus_12590) or (E_subulatus_00555) or (E_subulatus_12591) or (E_subulatus_00556) or (E_subulatus_20567)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ASN__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Charged__45__ASN__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ASPARTATE__45____45__TRNA__45__LIGASE__45__RXN" name="aspartate&amp;mdash;tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00324) or (E_subulatus_07947)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ASP__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__ASP__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ASPARTATE__45__SEMIALDEHYDE__45__DEHYDROGENASE__45__RXN" name="aspartate-semialdehyde dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21322) or (E_subulatus_21324) or (E_subulatus_21321) or (E_subulatus_21320) or (E_subulatus_21323)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7977 , PWY-2941 , PWY-6160 , P101-PWY , DAPLYSINESYN-PWY , HOMOSERSYN-PWY , PWY-2942 , PWY-5097 , PWY-6562 , PWY-6559 , PWY-7153</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ASPARTATE__45__SEMIALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__BETA__45__ASPARTYL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ASPARTATEKIN__45__RXN" name="aspartate kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21984) or (E_subulatus_01743) or (E_subulatus_01744) or (E_subulatus_21982) or (E_subulatus_25025) or (E_subulatus_18588) or (E_subulatus_21983) or (E_subulatus_01746) or (E_subulatus_21985) or (E_subulatus_01745)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7977 , PWY-2941 , PWY-6160 , P101-PWY , DAPLYSINESYN-PWY , HOMOSERSYN-PWY , PWY-2942 , PWY-5097 , PWY-6562 , PWY-6559 , PWY-7153</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__BETA__45__ASPARTYL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ASPCARBTRANS__45__RXN" name="aspartate carbamoyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03698) or (E_subulatus_23335) or (E_subulatus_12414) or (E_subulatus_14080) or (E_subulatus_11887) or (E_subulatus_11884) or (E_subulatus_22040) or (E_subulatus_22039) or (E_subulatus_11886) or (E_subulatus_11885) or (E_subulatus_11888)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7791 , PWY-5686 , PWY-7790</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBAMOYL__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBAMYUL__45__L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ATP__45__ADENYLYLTRANSFERASE__45__RXN" name="ATP adenylyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25337)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__P4_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ATP__45__CITRATE__45__PRO__45__S__45____45__LYASE__45__RXN" name="ATP-citrate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17382) or (E_subulatus_12371) or (E_subulatus_17383) or (E_subulatus_00867) or (E_subulatus_17381)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: P23-PWY , PWY-5172</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CIT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ATP__45__PYROPHOSPHATASE__45__RXN" name="ATP pyrophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09812)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ATPASE__45__RXN" name="ATPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02934) or (E_subulatus_22253) or (E_subulatus_13008) or (E_subulatus_11840) or (E_subulatus_10719) or (E_subulatus_01615) or (E_subulatus_15151) or (E_subulatus_24450) or (E_subulatus_13349) or (E_subulatus_25408) or (E_subulatus_17887) or (E_subulatus_18891) or (E_subulatus_24674) or (E_subulatus_00813) or (E_subulatus_10410) or (E_subulatus_03229) or (E_subulatus_25531) or (E_subulatus_18936) or (E_subulatus_10006) or (E_subulatus_10142) or (E_subulatus_04355) or (E_subulatus_07726) or (E_subulatus_22160) or (E_subulatus_13804) or (E_subulatus_02428) or (E_subulatus_17330) or (E_subulatus_09577) or (E_subulatus_00947) or (E_subulatus_19024) or (E_subulatus_23245) or (E_subulatus_20419) or (E_subulatus_19026) or (E_subulatus_02612) or (E_subulatus_07615) or (E_subulatus_09842) or (E_subulatus_23003) or (E_subulatus_20610) or (E_subulatus_12035) or (E_subulatus_23990) or (E_subulatus_01713) or (E_subulatus_01795) or (E_subulatus_14956) or (E_subulatus_05373) or (E_subulatus_08882) or (E_subulatus_00278) or (E_subulatus_16800) or (E_subulatus_06863) or (E_subulatus_23746) or (E_subulatus_21360) or (E_subulatus_12571) or (E_subulatus_11474) or (E_subulatus_12922) or (E_subulatus_20440) or (E_subulatus_01349) or (E_subulatus_00713) or (E_subulatus_13968) or (E_subulatus_07262) or (E_subulatus_20437) or (E_subulatus_22538) or (E_subulatus_00805) or (E_subulatus_01793) or (E_subulatus_07204) or (E_subulatus_23002) or (E_subulatus_13449) or (E_subulatus_01899) or (E_subulatus_02379) or (E_subulatus_07206) or (E_subulatus_24662) or (E_subulatus_19692) or (E_subulatus_21550) or (E_subulatus_12214) or (E_subulatus_02477) or (E_subulatus_23242) or (E_subulatus_00711) or (E_subulatus_22549) or (E_subulatus_00228) or (E_subulatus_12210) or (E_subulatus_11850) or (E_subulatus_20791) or (E_subulatus_24685) or (E_subulatus_04987) or (E_subulatus_16386) or (E_subulatus_05920) or (E_subulatus_00279) or (E_subulatus_11683) or (E_subulatus_21743) or (E_subulatus_20441) or (E_subulatus_12212) or (E_subulatus_01469) or (E_subulatus_12034) or (E_subulatus_02378) or (E_subulatus_05487) or (E_subulatus_11682) or (E_subulatus_07916) or (E_subulatus_03639) or (E_subulatus_21545) or (E_subulatus_12570) or (E_subulatus_06183) or (E_subulatus_24682) or (E_subulatus_05529) or (E_subulatus_21564) or (E_subulatus_15085) or (E_subulatus_14547) or (E_subulatus_12505) or (E_subulatus_00232) or (E_subulatus_23744) or (E_subulatus_15007) or (E_subulatus_21363) or (E_subulatus_17987) or (E_subulatus_00710) or (E_subulatus_12208) or (E_subulatus_19519) or (E_subulatus_13972) or (E_subulatus_17265) or (E_subulatus_01794) or (E_subulatus_15463) or (E_subulatus_07545) or (E_subulatus_01714) or (E_subulatus_12646) or (E_subulatus_14957) or (E_subulatus_00182) or (E_subulatus_13843) or (E_subulatus_15741) or (E_subulatus_21364) or (E_subulatus_11663) or (E_subulatus_19786) or (E_subulatus_13969) or (E_subulatus_12211) or (E_subulatus_19691) or (E_subulatus_21475) or (E_subulatus_16801) or (E_subulatus_24681) or (E_subulatus_02009) or (E_subulatus_08551) or (E_subulatus_19730) or (E_subulatus_20416) or (E_subulatus_22834) or (E_subulatus_19428) or (E_subulatus_17693) or (E_subulatus_03950) or (E_subulatus_24659) or (E_subulatus_07752) or (E_subulatus_09843) or (E_subulatus_15589) or (E_subulatus_19025) or (E_subulatus_21359) or (E_subulatus_02712) or (E_subulatus_21841) or (E_subulatus_19828) or (E_subulatus_16426) or (E_subulatus_25541) or (E_subulatus_12923) or (E_subulatus_20435) or (E_subulatus_21399) or (E_subulatus_24364) or (E_subulatus_17694) or (E_subulatus_11694) or (E_subulatus_09844) or (E_subulatus_12538) or (E_subulatus_01792) or (E_subulatus_23400) or (E_subulatus_12507) or (E_subulatus_25540) or (E_subulatus_06801) or (E_subulatus_00712) or (E_subulatus_24656) or (E_subulatus_16427) or (E_subulatus_15464) or (E_subulatus_20417) or (E_subulatus_07732) or (E_subulatus_24367) or (E_subulatus_11408) or (E_subulatus_14517) or (E_subulatus_05506) or (E_subulatus_15742) or (E_subulatus_05531) or (E_subulatus_12141) or (E_subulatus_22300) or (E_subulatus_01796) or (E_subulatus_20415) or (E_subulatus_05372) or (E_subulatus_19729) or (E_subulatus_23399) or (E_subulatus_13953) or (E_subulatus_09034) or (E_subulatus_13492) or (E_subulatus_17740) or (E_subulatus_01136) or (E_subulatus_15008) or (E_subulatus_22845) or (E_subulatus_12349) or (E_subulatus_05486) or (E_subulatus_00903) or (E_subulatus_02904) or (E_subulatus_16684) or (E_subulatus_20438) or (E_subulatus_09222) or (E_subulatus_22844) or (E_subulatus_22847) or (E_subulatus_02476) or (E_subulatus_15245) or (E_subulatus_02014) or (E_subulatus_02581) or (E_subulatus_04360) or (E_subulatus_12648) or (E_subulatus_02478) or (E_subulatus_16970) or (E_subulatus_25410) or (E_subulatus_23000) or (E_subulatus_00230) or (E_subulatus_24247) or (E_subulatus_21361) or (E_subulatus_20963) or (E_subulatus_09221) or (E_subulatus_07754) or (E_subulatus_14248) or (E_subulatus_03511) or (E_subulatus_20434) or (E_subulatus_13555) or (E_subulatus_05508) or (E_subulatus_20964) or (E_subulatus_13494) or (E_subulatus_24658) or (E_subulatus_12213) or (E_subulatus_12748) or (E_subulatus_13052) or (E_subulatus_02929) or (E_subulatus_22705) or (E_subulatus_10392) or (E_subulatus_20965) or (E_subulatus_12350) or (E_subulatus_12033) or (E_subulatus_04517) or (E_subulatus_12647) or (E_subulatus_00326) or (E_subulatus_02011) or (E_subulatus_07733) or (E_subulatus_17986) or (E_subulatus_21473) or (E_subulatus_24816) or (E_subulatus_13491) or (E_subulatus_12506) or (E_subulatus_11475) or (E_subulatus_20055) or (E_subulatus_06184) or (E_subulatus_00231) or (E_subulatus_02779) or (E_subulatus_21400) or (E_subulatus_12749) or (E_subulatus_16457) or (E_subulatus_12209) or (E_subulatus_09220) or (E_subulatus_03327) or (E_subulatus_08550) or (E_subulatus_25523) or (E_subulatus_24684) or (E_subulatus_07942) or (E_subulatus_13448) or (E_subulatus_00017) or (E_subulatus_24661) or (E_subulatus_10039) or (E_subulatus_02012) or (E_subulatus_02715) or (E_subulatus_25428) or (E_subulatus_00714) or (E_subulatus_03797) or (E_subulatus_20674) or (E_subulatus_03532) or (E_subulatus_02013) or (E_subulatus_11473) or (E_subulatus_19479) or (E_subulatus_13051) or (E_subulatus_00229) or (E_subulatus_02930) or (E_subulatus_12645) or (E_subulatus_20259) or (E_subulatus_15855) or (E_subulatus_00706) or (E_subulatus_07036) or (E_subulatus_02010) or (E_subulatus_17245) or (E_subulatus_21548) or (E_subulatus_15462) or (E_subulatus_24986) or (E_subulatus_13493) or (E_subulatus_12921) or (E_subulatus_21549) or (E_subulatus_01715) or (E_subulatus_24953) or (E_subulatus_03951) or (E_subulatus_01968) or (E_subulatus_21362) or (E_subulatus_15743) or (E_subulatus_02713) or (E_subulatus_03147) or (E_subulatus_07205) or (E_subulatus_09224) or (E_subulatus_13971) or (E_subulatus_24655) or (E_subulatus_16983) or (E_subulatus_00806) or (E_subulatus_24365) or (E_subulatus_07027) or (E_subulatus_24657) or (E_subulatus_14527) or (E_subulatus_21581) or (E_subulatus_07917) or (E_subulatus_06905) or (E_subulatus_23989) or (E_subulatus_11563) or (E_subulatus_06476) or (E_subulatus_02780) or (E_subulatus_02931) or (E_subulatus_14955) or (E_subulatus_22833) or (E_subulatus_07037) or (E_subulatus_21766) or (E_subulatus_17972) or (E_subulatus_14533) or (E_subulatus_19429) or (E_subulatus_20054) or (E_subulatus_12649) or (E_subulatus_13447) or (E_subulatus_11564) or (E_subulatus_13554) or (E_subulatus_24366) or (E_subulatus_01062) or (E_subulatus_13188) or (E_subulatus_25202) or (E_subulatus_24683) or (E_subulatus_25409) or (E_subulatus_04775) or (E_subulatus_05919) or (E_subulatus_13487) or (E_subulatus_14154) or (E_subulatus_11748) or (E_subulatus_02778) or (E_subulatus_24363) or (E_subulatus_24952) or (E_subulatus_18107) or (E_subulatus_23667) or (E_subulatus_25539) or (E_subulatus_22846) or (E_subulatus_09841) or (E_subulatus_24742) or (E_subulatus_03328) or (E_subulatus_15006) or (E_subulatus_23243) or (E_subulatus_20418) or (E_subulatus_21474) or (E_subulatus_21000) or (E_subulatus_20439) or (E_subulatus_07207) or (E_subulatus_06865) or (E_subulatus_14330) or (E_subulatus_19518) or (E_subulatus_18464) or (E_subulatus_02714) or (E_subulatus_22848) or (E_subulatus_24007) or (E_subulatus_07028) or (E_subulatus_09223) or (E_subulatus_25429) or (E_subulatus_20999) or (E_subulatus_01660) or (E_subulatus_24660) or (E_subulatus_01252) or (E_subulatus_03796) or (E_subulatus_20436) or (E_subulatus_25522) or (E_subulatus_15021) or (E_subulatus_12508) or (E_subulatus_19613) or (E_subulatus_06059) or (E_subulatus_17264) or (E_subulatus_06904) or (E_subulatus_23001) or (E_subulatus_13446) or (E_subulatus_12509) or (E_subulatus_13952) or (E_subulatus_00080) or (E_subulatus_03510) or (E_subulatus_06864) or (E_subulatus_22539) or (E_subulatus_24246) or (E_subulatus_20421) or (E_subulatus_05530) or (E_subulatus_08547) or (E_subulatus_15792) or (E_subulatus_16428) or (E_subulatus_23244) or (E_subulatus_14518) or (E_subulatus_07753) or (E_subulatus_16063) or (E_subulatus_25201) or (E_subulatus_05916) or (E_subulatus_05921) or (E_subulatus_02070)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ATPPHOSPHORIBOSYLTRANS__45__RXN" name="ATP phosphoribosyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12968)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHORIBOSYL__45__ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRPP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ATPSYN__45__RXN" name="proton-transporting ATP synthase activity, rotational mechanism" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24675) or (E_subulatus_03951) or (E_subulatus_25408) or (E_subulatus_03950) or (E_subulatus_18937) or (E_subulatus_17887) or (E_subulatus_25531) or (E_subulatus_10142) or (E_subulatus_24674) or (E_subulatus_03229) or (E_subulatus_18891) or (E_subulatus_24450) or (E_subulatus_04355) or (E_subulatus_10410) or (E_subulatus_25410) or (E_subulatus_11840) or (E_subulatus_13008) or (E_subulatus_18936) or (E_subulatus_04356) or (E_subulatus_25409)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7980</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_e" stoichiometry="4" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BADH__45__RXN" name="betaine aldehyde dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14940) or (E_subulatus_05449) or (E_subulatus_14941)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: BETSYN-PWY , PWY-3722 , PWY1F-353 , PWY-7494 , CHOLINE-BETAINE-ANA-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BETAINE_ALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_BETAINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BETA__45__LACTAMASE__45__RXN" name="beta-lactamase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20490) or (E_subulatus_12155) or (E_subulatus_14197) or (E_subulatus_15171)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Beta__45__Lactams_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8550_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BETA__45__UREIDOPROPIONASE__45__RXN" name="BETA-UREIDOPROPIONASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05075)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-3982</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_3__45__UREIDO__45__PROPIONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_B__45__ALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BETAGALACTOSID__45__RXN" name="BETAGALACTOSID-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1083_3a) or (EsuBft501_15a) or (EsuBft358_4a) or (EsuBft196_13a) or (EsuBft358_3a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: BGALACT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15972_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GALACTOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BILIVERDIN__45__REDUCTASE__45__RXN" name="BILIVERDIN-REDUCTASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5874</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BILIVERDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BILIRUBIN_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BIOTIN__45__CARBOXYL__45__RXN" name="biotin carboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22691) or (E_subulatus_21148) or (E_subulatus_21149) or (E_subulatus_21382) or (E_subulatus_04285) or (E_subulatus_21151) or (E_subulatus_21385) or (E_subulatus_21383) or (E_subulatus_05704) or (E_subulatus_21386) or (E_subulatus_21387) or (E_subulatus_21384) or (E_subulatus_21150) or (E_subulatus_08408) or (E_subulatus_04286) or (E_subulatus_05705)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5789 , PWY0-1264 , PWY-5743 , PWY-5744</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_biotin__45__L__45__lysine__45__in__45__BCCP__45__dimers_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_carboxybiotin__45__L__45__lysine__45__in__45__BCCP__45__dimers_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BIOTINLIG__45__RXN" name="biotin-[acetyl-CoA-carboxylase] ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16341) or (E_subulatus_03808) or (E_subulatus_03807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1264</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BCCP__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BIOTIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BCCP__45__biotin__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BRANCHED__45__CHAINAMINOTRANSFERILEU__45__RXN" name="isoleucine transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12552) or (E_subulatus_14594) or (E_subulatus_14595) or (E_subulatus_00115) or (E_subulatus_14596) or (E_subulatus_14599) or (E_subulatus_14600)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5078 , PWY-5104 , ILEUDEG-PWY , PWY-5108 , PWY-5101 , ILEUSYN-PWY , PWY-5103</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ILE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETO__45__3__45__METHYL__45__VALERATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BRANCHED__45__CHAINAMINOTRANSFERLEU__45__RXN" name="leucine transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14595) or (E_subulatus_00115) or (E_subulatus_14599) or (E_subulatus_14596) or (E_subulatus_14594) or (E_subulatus_14600)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5076 , PWY-7767 , LEU-DEG2-PWY , LEUSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LEU_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2K__45__4CH3__45__PENTANOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BRANCHED__45__CHAINAMINOTRANSFERVAL__45__RXN" name="valine transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14595) or (E_subulatus_00115) or (E_subulatus_14596) or (E_subulatus_14599) or (E_subulatus_14594) or (E_subulatus_14600)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: VALSYN-PWY , ALANINE-VALINESYN-PWY , VALDEG-PWY , PWY-5057</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_VAL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETO__45__ISOVALERATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BTUR2__45__RXN" name="cobinamide adenosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25799)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__20903_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Reduced__45__Flavoproteins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYLCOBINAMIDE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_P3I_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Oxidized__45__Flavoproteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_BUTYRYL__45__COA__45__DEHYDROGENASE__45__RXN" name="butanoyl-CoA dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_25109) or (E_subulatus_21544) or (E_subulatus_25110)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6583 , PWY-5022 , PWY-5677 , P163-PWY , P162-PWY , CENTFERM-PWY , PWY-5676 , P3-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BUTYRYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CROTONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CAFFEOYL__45__COA__45__O__45__METHYLTRANSFERASE__45__RXN" name="CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15056)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-361 , PWY-7398 , PWY-1121 , PWY-5710 , PWY-7498 , PWY-6792 , PWY-6039</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CAFFEOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERULOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CARBODEHYDRAT__45__RXN" name="carbonate dehydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13623) or (E_subulatus_15067) or (E_subulatus_25291) or (E_subulatus_21159) or (E_subulatus_21157) or (E_subulatus_21158) or (E_subulatus_25289) or (E_subulatus_24440) or (E_subulatus_13621) or (E_subulatus_24441) or (E_subulatus_13622) or (E_subulatus_15917) or (E_subulatus_25290) or (E_subulatus_15068)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_H2CO3_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CARBONYL__45__REDUCTASE__45__NADPH__45__RXN" name="CARBONYL-REDUCTASE-NADPH-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23749)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Secondary__45__Alcohols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_LONG__45__CHAIN__45__KETONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CARBOXYCYCLOHEXADIENYL__45__DEHYDRATASE__45__RXN" name="arogenate dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13405) or (E_subulatus_13406) or (E_subulatus_07858) or (E_subulatus_08604) or (E_subulatus_07857)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3462</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__659_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CARBOXYLESTERASE__45__RXN" name="carboxylesterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25832) or (E_subulatus_19092) or (E_subulatus_14865) or (E_subulatus_18257) or (E_subulatus_18262) or (E_subulatus_21870) or (E_subulatus_19094) or (E_subulatus_21230) or (E_subulatus_04105) or (E_subulatus_00063) or (E_subulatus_19095) or (E_subulatus_16013) or (E_subulatus_18261) or (E_subulatus_25092) or (E_subulatus_15207) or (E_subulatus_03119) or (E_subulatus_18259) or (E_subulatus_12303) or (E_subulatus_12304) or (E_subulatus_00064) or (E_subulatus_15388) or (E_subulatus_14143) or (E_subulatus_21869) or (E_subulatus_04561) or (E_subulatus_15338) or (E_subulatus_18263) or (E_subulatus_15387) or (E_subulatus_03121) or (E_subulatus_25438) or (E_subulatus_02795) or (E_subulatus_06890) or (E_subulatus_02797) or (E_subulatus_24432) or (E_subulatus_08500) or (E_subulatus_18256) or (E_subulatus_19093) or (E_subulatus_15339) or (E_subulatus_25439) or (E_subulatus_14668) or (E_subulatus_02796) or (E_subulatus_06891) or (E_subulatus_03118) or (E_subulatus_25833) or (E_subulatus_14705) or (E_subulatus_16015) or (E_subulatus_24429) or (E_subulatus_24431) or (E_subulatus_10229) or (E_subulatus_12305) or (E_subulatus_04562) or (E_subulatus_18255) or (E_subulatus_09863) or (E_subulatus_24430) or (E_subulatus_19091) or (E_subulatus_05151) or (E_subulatus_04563) or (E_subulatus_14145) or (E_subulatus_15337) or (E_subulatus_05150) or (E_subulatus_18258) or (E_subulatus_00065) or (E_subulatus_06892) or (E_subulatus_16014) or (E_subulatus_14144) or (E_subulatus_03122) or (E_subulatus_21634) or (E_subulatus_15859) or (E_subulatus_18260) or (E_subulatus_03120) or (E_subulatus_25091) or (E_subulatus_03117)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Carboxylic__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Alcohols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CARBPSYN__45__RXN" name="carbamoyl phosphate synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11887) or (E_subulatus_11884) or (E_subulatus_22040) or (E_subulatus_22039) or (E_subulatus_11886) or (E_subulatus_11885) or (E_subulatus_20257) or (E_subulatus_11888)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: ARGSYN-PWY , PWY-5686 , PWY-7400 , PWY-7790 , PWY-7791 , PWY-5154 , ARGSYNBSUB-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBAMOYL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CARDIOLIPSYN__45__RXN" name="cardiolipin synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18345) or (E_subulatus_18344) or (E_subulatus_18347) or (E_subulatus_18346)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5668</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__1__45__PHOSPHATIDYL__45__GLYCEROL_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARDIOLIPIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CATAL__45__RXN" name="catalase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02016) or (E_subulatus_05686) or (E_subulatus_05687) or (E_subulatus_02015) or (E_subulatus_00420) or (E_subulatus_07826) or (E_subulatus_08834) or (E_subulatus_13413) or (E_subulatus_11753) or (E_subulatus_00421) or (E_subulatus_13415) or (E_subulatus_13414) or (E_subulatus_08836) or (E_subulatus_08835) or (E_subulatus_10790) or (E_subulatus_08833)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5506 , DETOX1-PWY , DETOX1-PWY-1</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CDPDIGLYSYN__45__RXN" name="CTP:phosphatidate cytidyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25089)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7817 , PWY0-1319 , PWY-5981 , PWY-5667</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__PHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CDPDIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CDPKIN__45__RXN" name="nucleoside diphosphate kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_03750) or (E_subulatus_23205) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_03631) or (E_subulatus_19893) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7205</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CDPREDUCT__45__RXN" name="CDP reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16358) or (E_subulatus_11791) or (E_subulatus_15745) or (E_subulatus_25204) or (E_subulatus_16363) or (E_subulatus_20463) or (E_subulatus_16359) or (E_subulatus_17310) or (E_subulatus_20465) or (E_subulatus_17311) or (E_subulatus_16362) or (E_subulatus_15746) or (E_subulatus_15977) or (E_subulatus_17312) or (E_subulatus_17309) or (E_subulatus_25205) or (E_subulatus_07744) or (E_subulatus_07745) or (E_subulatus_18208) or (E_subulatus_16360) or (E_subulatus_16361) or (E_subulatus_20464)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7184 , PWY0-166 , PWY-7198 , PWY-6545 , PWY-7210</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DCDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CELLULOSE__45__SYNTHASE__45__UDP__45__FORMING__45__RXN" name="cellulose synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03912) or (E_subulatus_15312) or (E_subulatus_20086) or (E_subulatus_15311) or (E_subulatus_13245) or (E_subulatus_23953) or (E_subulatus_25514) or (E_subulatus_25346) or (E_subulatus_22591) or (E_subulatus_20085) or (E_subulatus_13243) or (E_subulatus_07998) or (E_subulatus_22590) or (E_subulatus_12165) or (E_subulatus_25345) or (E_subulatus_22592) or (E_subulatus_20084) or (E_subulatus_25513) or (E_subulatus_07999) or (E_subulatus_13244) or (E_subulatus_25347) or (E_subulatus_12164) or (E_subulatus_25344)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1001</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CELLULOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CELLULOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CHALCONE__45__ISOMERASE__45__RXN" name="chalcone isomerase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12873)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Chalcones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FLAVANONES_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CHLORIDE__45__PEROXIDASE__45__RXN" name="chloride peroxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23616) or (E_subulatus_08105) or (E_subulatus_23617) or (E_subulatus_08107) or (E_subulatus_13036) or (E_subulatus_13034) or (E_subulatus_08106) or (E_subulatus_13035)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RH__45__Group_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CL__45___c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Chlorides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CHORISMATE__45__SYNTHASE__45__RXN" name="chorismate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21508) or (E_subulatus_21507) or (E_subulatus_21509) or (E_subulatus_21510)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6163</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__ENOLPYRUVYL__45__SHIKIMATE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CHORISMATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CHORISMATEMUT__45__RXN" name="chorismate mutase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02381) or (E_subulatus_02380)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: TYRSYN , PWY-6120 , PWY-3462 , PHESYN , PWY-6627 , PWY-7626 , PWY-3461</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHORISMATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PREPHENATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CITRAMALATE__45__LYASE__45__RXN" name="citramalate lyase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07731) or (E_subulatus_07730)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5087</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__CITRAMALATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CITSYN__45__RXN" name="citrate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08411)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P105-PWY , PWY-6969 , PWY-7124 , FERMENTATION-PWY , PWY-5690 , GLYOXYLATE-BYPASS , PWY66-398 , PWY-7254 , PWY-5913 , PWY-6728 , TCA , REDCITCYC , PWY-6549</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CIT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_COBALADENOSYLTRANS__45__RXN" name="cob(I)alamin adenosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25799)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6268 , PWY-7974</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__20905_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_P3I_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_B12__45__Corrinoid__45__Adenosyltranferase_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CREATINE__45__KINASE__45__RXN" name="creatine kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22533) or (E_subulatus_01045) or (E_subulatus_01046) or (E_subulatus_01044) or (E_subulatus_01043)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6158</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CREATINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CREATINE__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CTPSYN__45__RXN" name="CTP synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22802) or (E_subulatus_22870)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7177 , PWY-7176 , PWY-7185</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYCLOARTENOL__45__SYNTHASE__45__RXN" name="cycloartenol synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09803) or (E_subulatus_09804)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-8028 , PWY-6109</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_EPOXYSQUALENE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CYCLOARTENOL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYCLOEUCALENOL__45__CYCLOISOMERASE__45__RXN" name="cycloeucalenol cycloisomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24573)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2541 , PWY-7155</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYCLOEUCALENOL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OBTUSIFOLIOL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYSPH__45__RXN" name="CYSPH-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-702</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_O__45__PHOSPHO__45__L__45__HOMOSERINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__CYSTATHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYSTATHIONASE__45__RXN" name="CYSTATHIONASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__CYSTATHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HOMO__45__SER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYSTATHIONINE__45__BETA__45__LYASE__45__RXN" name="cystathionine &amp;beta;-lyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22240)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-801</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__CYSTATHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYSTATHIONINE__45__BETA__45__SYNTHASE__45__RXN" name="cystathionine &amp;beta;-synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06191) or (E_subulatus_06192) or (E_subulatus_06194) or (E_subulatus_06193) or (E_subulatus_20711) or (E_subulatus_20712) or (E_subulatus_20710) or (E_subulatus_06195) or (E_subulatus_06197) or (E_subulatus_06196) or (E_subulatus_20709)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-801 , HOMOCYSDEGR-PWY , PWY-I9</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__CYSTATHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYSTEAMINE__45__DIOXYGENASE__45__RXN" name="cysteamine dioxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18325)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7850</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__239_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYPOTAURINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYSTEINE__45____45__TRNA__45__LIGASE__45__RXN" name="cysteine-tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08467) or (E_subulatus_05212) or (E_subulatus_00957)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Charged__45__CYS__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYSTEINE__45__AMINOTRANSFERASE__45__RXN" name="cysteine transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16058)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5329 , PWY0-1534</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__MERCAPTO__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYSTEINE__45__DIOXYGENASE__45__RXN" name="cysteine dioxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22568) or (E_subulatus_22569) or (E_subulatus_13931) or (E_subulatus_22570)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: CYSTEINE-DEG-PWY , PWY-5331</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__SULFINOALANINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYSTHIOCYS__45__RXN" name="CYSTHIOCYS-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft610_6a) or (EsuBft739_6a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYSTINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THIOCYSTEINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYTIDEAM__45__RXN" name="deoxycytidine deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01215) or (E_subulatus_01214)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7181 , PWY-7199</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DEOXYCYTIDINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DEOXYURIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYTIDEAM2__45__RXN" name="cytidine deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01215) or (E_subulatus_01214)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1295 , PWY-6556 , PWY-7193</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYTIDINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_URIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYTIKIN__45__RXN" name="CYTIKIN-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5532 , PWY-7193</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYTIDINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYTOCHROME__45__B5__45__REDUCTASE__45__RXN" name="NADH-cytochrome b5 reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03230) or (E_subulatus_03679)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_CYTOCHROME__45__C__45__OXIDASE__45__RXN" name="cytochrome c oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19062) or (E_subulatus_02280) or (E_subulatus_01151) or (E_subulatus_01159) or (E_subulatus_20511) or (E_subulatus_00014) or (E_subulatus_02281) or (E_subulatus_20512) or (E_subulatus_17194) or (E_subulatus_02279) or (E_subulatus_03225) or (E_subulatus_20497) or (E_subulatus_17195)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7279 , PWY-3781 , PWY-4521</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="8" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Reduced_e" stoichiometry="4" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_e" stoichiometry="4" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Oxidized_e" stoichiometry="4" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_D__45____45__TARTRATE__45__DEHYDRATASE__45__RXN" name="D-tartrate dehydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14960) or (E_subulatus_14958) or (E_subulatus_14959)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__TARTRATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_D__45__LACTATE__45__DEHYDROGENASE__45__CYTOCHROME__45__RXN" name="lactate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11242)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: MGLDLCTANA-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cytochromes__45__C__45__Oxidized_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_D__45__LACTATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Reduced_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_D__45__PPENTOMUT__45__RXN" name="D-deoxyribose 1,5-phosphomutase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20342) or (E_subulatus_07640) or (E_subulatus_07638) or (E_subulatus_20343) or (E_subulatus_07642) or (E_subulatus_07641) or (E_subulatus_07639)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7180</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DEOXY__45__D__45__RIBOSE__45__1__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DEOXY__45__RIBOSE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DADPKIN__45__RXN" name="dADP kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_03750) or (E_subulatus_23205) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_03631) or (E_subulatus_19893) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7224 , PWY-7220 , PWY-7227</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DAHPSYN__45__RXN" name="3-deoxy-7-phosphoheptulonate synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16573)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6164</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ERYTHROSE__45__4P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__DEOXY__45__D__45__ARABINO__45__HEPTULOSONATE__45__7__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DAPASYN__45__RXN" name="7,8-diaminopelargonic acid synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18708)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1507</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_8__45__AMINO__45__7__45__OXONONANOATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_S__45__ADENOSYL__45__4__45__METHYLTHIO__45__2__45__OXOBUTANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIAMINONONANOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DCDPKIN__45__RXN" name="dCDP kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_03750) or (E_subulatus_23205) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_03631) or (E_subulatus_19893) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7184 , PWY0-166 , PWY-7197 , PWY-7198 , PWY-6545 , PWY-7210</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DCDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DCTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DCMP__45__DEAMINASE__45__RXN" name="dCMP deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22205) or (E_subulatus_22204)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7210</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DCMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DUMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DCTP__45__PYROPHOSPHATASE__45__RXN" name="dCTP pyrophosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_16057) or (E_subulatus_16985) or (E_subulatus_02580) or (E_subulatus_01318) or (E_subulatus_16056)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7206</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DCTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DCMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DEOXYADENYLATE__45__KINASE__45__RXN" name="DEOXYADENYLATE-KINASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7224</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DAMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DEOXYHYPUSINE__45__MONOOXYGENASE__45__RXN" name="deoxyhypusine hydroxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07314)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5905</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__9973_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_EIF5A__45__HYPUSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DEOXYRIBODIPYRIMIDINE__45__PHOTOLYASE__45__RXN" name="DNA photolyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09286) or (E_subulatus_09287)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DNA__45__deoxycytidine__45__thymidine__45__dimer_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Light_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DNA__45__Cytidines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DNA__45__thymidines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DEPHOSPHOCOAKIN__45__RXN" name="dephospho-CoA kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19043) or (E_subulatus_19044)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7851 , COA-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DEPHOSPHO__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DETHIOBIOTIN__45__SYN__45__RXN" name="dethiobiotin synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18708)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7380 , PWY0-1507</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIAMINONONANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_DETHIOBIOTIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DGDPKIN__45__RXN" name="dGDP kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_03750) or (E_subulatus_23205) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_03631) or (E_subulatus_19893) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7224 , PWY-7222 , PWY-7226</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DGDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DGTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIACYLGLYCEROL__45__O__45__ACYLTRANSFERASE__45__RXN" name="acyl-CoA:diacylglycerol acyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16434) or (E_subulatus_21142) or (E_subulatus_03624) or (E_subulatus_16435)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRIGLSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Triacylglycerols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIACYLGLYKIN__45__RXN" name="diacylglycerol kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10947) or (E_subulatus_24150) or (E_subulatus_21941) or (E_subulatus_06061) or (E_subulatus_24151) or (E_subulatus_10951) or (E_subulatus_10949) or (E_subulatus_10948) or (E_subulatus_24152) or (E_subulatus_10950)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7039 , PWY-7817</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__PHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIAMINOPIMDECARB__45__RXN" name="diaminopimelate decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04926) or (E_subulatus_04925) or (E_subulatus_04927) or (E_subulatus_04924)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5097 , DAPLYSINESYN-PWY , PWY-2941 , PWY-2942</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MESO__45__DIAMINOPIMELATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_LYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIAMINOPIMEPIM__45__RXN" name="diaminopimelate epimerase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22451)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5097 , DAPLYSINESYN-PWY , PWY-2941</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LL__45__DIAMINOPIMELATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MESO__45__DIAMINOPIMELATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIAMTRANSAM__45__RXN" name="diamine transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20725)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Aliphatic__45__Alpha__45__Omega__45__Diamines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Aliphatic__45__Omega__45__Amino__45__Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIENOYLCOAREDUCT__45__RXN" name="2,4-dienoyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01876) or (E_subulatus_12766)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_T2__45__C4__45__DECADIENYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_T2__45__DECENOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDLIPACETRANS__45__RXN" name="dihydrolipoyllysine-residue acetyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21822) or (E_subulatus_21824) or (E_subulatus_18266) or (E_subulatus_21823) or (E_subulatus_19867)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDROLIPOAMIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ACETYLDIHYDROLIPOAMIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDRODIPICSYN__45__RXN" name="4-hydroxy-tetrahydrodipicolinate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07317)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5097 , DAPLYSINESYN-PWY , PWY-2941 , PWY-2942</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ASPARTATE__45__SEMIALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14443_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDROFOLATEREDUCT__45__RXN" name="dihydrofolate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14834)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3841 , 1CMET2-PWY , PWY-6614</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROFOLATE__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDROFOLATEREDUCT__45__RXN__45__THF__47__NADP__47____47__DIHYDROFOLATE__47__NADPH__47__PROTON__46__37__46__" name="DIHYDROFOLATEREDUCT-RXN-THF/NADP//DIHYDROFOLATE/NADPH/PROTON.37." reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROFOLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THF_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDROFOLATESYNTH__45__RXN" name="dihydrofolate synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09050) or (E_subulatus_09049) or (E_subulatus_09048)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6614</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_7__45__8__45__DIHYDROPTEROATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDROFOLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDROKAEMPFEROL__45__4__45__REDUCTASE__45__RXN" name="DIHYDROKAEMPFEROL-4-REDUCTASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14571) or (E_subulatus_03281) or (E_subulatus_08480)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY1F-823</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROKAEMPFEROL__45__CMPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_LEUCOPELARGONIDIN__45__CMPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDRONEOPTERIN__45__MONO__45__P__45__DEPHOS__45__RXN" name="DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20022) or (E_subulatus_02764) or (E_subulatus_11806) or (E_subulatus_25425) or (E_subulatus_12666) or (E_subulatus_19973) or (E_subulatus_04553) or (E_subulatus_19729) or (E_subulatus_20551) or (E_subulatus_22489) or (E_subulatus_06627) or (E_subulatus_05672) or (E_subulatus_09115) or (E_subulatus_15608) or (E_subulatus_00649) or (E_subulatus_24944) or (E_subulatus_23712) or (E_subulatus_20483) or (E_subulatus_02180) or (E_subulatus_21748)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6797 , PWY-7539 , PWY-6147</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDRONEOPTERIN__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIHYDRO__45__NEO__45__PTERIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDROOROT__45__RXN" name="dihydroorotase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11887) or (E_subulatus_11884) or (E_subulatus_22040) or (E_subulatus_22039) or (E_subulatus_11885) or (E_subulatus_12414)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7791 , PWY-5686 , PWY-7790</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DI__45__H__45__OROTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBAMYUL__45__L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDROOROTATE__45__DEHYDROGENASE__45__RXN" name="dihydroorotate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06327) or (E_subulatus_06326)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5686</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DI__45__H__45__OROTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETR__45__Quinones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETR__45__Quinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OROTATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDROXYISOVALDEHYDRAT__45__RXN" name="2,3-dihydroxy-isovalerate dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10888) or (E_subulatus_10889)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: VALSYN-PWY , PWY-7111</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13357_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__KETO__45__ISOVALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIHYDROXYMETVALDEHYDRAT__45__RXN" name="2,3-Dihydroxy-3-methylvalerate dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10888) or (E_subulatus_10889)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: ILEUSYN-PWY , PWY-5103 , PWY-5104 , PWY-5101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__KETO__45__2__45__METHYLVALERATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__KETO__45__3__45__METHYL__45__VALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIOHBUTANONEPSYN__45__RXN" name="3,4-dihydroxy-2-butanone-4-phosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18126) or (E_subulatus_18127)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6168 , PWY-6167 , RIBOSYN2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RIBULOSE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDROXY__45__BUTANONE__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DIPHOSPHOMEVALONTE__45__DECARBOXYLASE__45__RXN" name="diphosphomevalonate decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21848) or (E_subulatus_21847) or (E_subulatus_21845) or (E_subulatus_21846)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7391 , PWY-922</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__641_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DELTA3__45__ISOPENTENYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DISULFOXRED__45__RXN" name="protein disulfide oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21308) or (E_subulatus_19005) or (E_subulatus_19003) or (E_subulatus_19001) or (E_subulatus_14851) or (E_subulatus_22801) or (E_subulatus_07544) or (E_subulatus_23583) or (E_subulatus_10953) or (E_subulatus_00655) or (E_subulatus_22957) or (E_subulatus_19007) or (E_subulatus_19523) or (E_subulatus_11463) or (E_subulatus_04261) or (E_subulatus_19004) or (E_subulatus_05080) or (E_subulatus_19000) or (E_subulatus_13940) or (E_subulatus_03617) or (E_subulatus_10317) or (E_subulatus_00657) or (E_subulatus_00656) or (E_subulatus_11697) or (E_subulatus_09462) or (E_subulatus_04262) or (E_subulatus_11462) or (E_subulatus_01363) or (E_subulatus_09476) or (E_subulatus_19006) or (E_subulatus_04260) or (E_subulatus_04543) or (E_subulatus_13941) or (E_subulatus_19002) or (E_subulatus_23582) or (E_subulatus_04259) or (E_subulatus_09180) or (E_subulatus_02689) or (E_subulatus_16053) or (E_subulatus_07819) or (E_subulatus_19524) or (E_subulatus_19522) or (E_subulatus_11695) or (E_subulatus_22129) or (E_subulatus_10318) or (E_subulatus_11360) or (E_subulatus_19008) or (E_subulatus_23652) or (E_subulatus_09477) or (E_subulatus_11171) or (E_subulatus_02688) or (E_subulatus_01362) or (E_subulatus_20967) or (E_subulatus_11172) or (E_subulatus_19525) or (E_subulatus_09463) or (E_subulatus_10954) or (E_subulatus_05497) or (E_subulatus_09181) or (E_subulatus_11696) or (E_subulatus_18141) or (E_subulatus_04739) or (E_subulatus_10955) or (E_subulatus_18142) or (E_subulatus_11173) or (E_subulatus_05822)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Oxidized__45__Disulfide__45__Carrier__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__Red__45__Disulfides_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Reduced__45__Disulfide__45__Carrier__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__Ox__45__Disulfides_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DISULISOM__45__RXN" name="DISULISOM-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft83_25a) or (EsuBft421_9a) or (EsuBft126_19a) or (EsuBft1226_2a) or (EsuBft332_12a) or (EsuBft315_17a) or (EsuBft555_13a) or (EsuBft455_10a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_General__45__Protein__45__Substrates_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_General__45__Protein__45__Substrates_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DLACTDEHYDROGNAD__45__RXN" name="D-lactate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03798)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: FERMENTATION-PWY , P122-PWY , ALACAT2-PWY , PWY-6901 , PWY-6454 , PWY4LZ-257</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__LACTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DNA__45__CYTOSINE__45__5__45____45__METHYLTRANSFERASE__45__RXN" name="DNA-cytosine methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13722) or (E_subulatus_13720) or (E_subulatus_13721)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DNA__45__Cytosines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__Methylcytosine__45__DNA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DNA__45__DIRECTED__45__DNA__45__POLYMERASE__45__RXN" name="DNA-directed DNA polymerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03381) or (E_subulatus_18555) or (E_subulatus_01528) or (E_subulatus_00278) or (E_subulatus_03639) or (E_subulatus_06331) or (E_subulatus_18489) or (E_subulatus_01236) or (E_subulatus_21362) or (E_subulatus_01234) or (E_subulatus_21360) or (E_subulatus_15075) or (E_subulatus_01129) or (E_subulatus_12646) or (E_subulatus_09433) or (E_subulatus_21359) or (E_subulatus_13331) or (E_subulatus_21140) or (E_subulatus_04984) or (E_subulatus_15076) or (E_subulatus_23603) or (E_subulatus_04373) or (E_subulatus_07735) or (E_subulatus_16684) or (E_subulatus_06567) or (E_subulatus_24213) or (E_subulatus_04983) or (E_subulatus_12649) or (E_subulatus_01526) or (E_subulatus_06569) or (E_subulatus_21364) or (E_subulatus_24274) or (E_subulatus_13330) or (E_subulatus_01527) or (E_subulatus_21139) or (E_subulatus_21141) or (E_subulatus_18490) or (E_subulatus_12749) or (E_subulatus_18553) or (E_subulatus_00279) or (E_subulatus_12748) or (E_subulatus_08093) or (E_subulatus_01130) or (E_subulatus_21363) or (E_subulatus_13257) or (E_subulatus_12648) or (E_subulatus_12645) or (E_subulatus_18557) or (E_subulatus_12417) or (E_subulatus_03380) or (E_subulatus_19259) or (E_subulatus_12418) or (E_subulatus_06568) or (E_subulatus_20030) or (E_subulatus_01235) or (E_subulatus_18556) or (E_subulatus_23216) or (E_subulatus_21361) or (E_subulatus_04374) or (E_subulatus_09836) or (E_subulatus_12647) or (E_subulatus_18554) or (E_subulatus_01233) or (E_subulatus_13329) or (E_subulatus_01128) or (E_subulatus_04134)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Deoxy__45__Ribonucleoside__45__Triphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DNA__45__N_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DNA__45__N_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DNA__45__DIRECTED__45__RNA__45__POLYMERASE__45__RXN" name="DNA-directed 5&apos;-3&apos; RNA polymerase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01630) or (E_subulatus_25698) or (E_subulatus_20812) or (E_subulatus_08144) or (E_subulatus_09451) or (E_subulatus_24096) or (E_subulatus_05570) or (E_subulatus_25696) or (E_subulatus_08025) or (E_subulatus_01632) or (E_subulatus_09686) or (E_subulatus_09689) or (E_subulatus_09452) or (E_subulatus_02782) or (E_subulatus_04761) or (E_subulatus_11973) or (E_subulatus_02255) or (E_subulatus_15214) or (E_subulatus_18833) or (E_subulatus_04760) or (E_subulatus_09688) or (E_subulatus_01631) or (E_subulatus_16531) or (E_subulatus_16530) or (E_subulatus_25697) or (E_subulatus_09453) or (E_subulatus_17237) or (E_subulatus_09687) or (E_subulatus_08143) or (E_subulatus_24095)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Nucleoside__45__Triphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DNA__45__LIGASE__45__ATP__45__RXN" name="DNA ligase (ATP)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16238) or (E_subulatus_18782) or (E_subulatus_16239) or (E_subulatus_02446)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__Hydroxy__45__Terminated__45__DNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__Phospho__45__terminated__45__DNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DNA__45__N_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DNA__45__LIGASE__45__NAD__43____45__RXN" name="DNA ligase (NAD+)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14723) or (E_subulatus_23474) or (E_subulatus_11271) or (E_subulatus_16774) or (E_subulatus_16377) or (E_subulatus_16376) or (E_subulatus_23476) or (E_subulatus_23475) or (E_subulatus_17275) or (E_subulatus_08368) or (E_subulatus_11270) or (E_subulatus_11269)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__Hydroxy__45__Terminated__45__DNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__Phospho__45__terminated__45__DNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DNA__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NICOTINAMIDE_NUCLEOTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DOLICHOL__45__KINASE__45__RXN" name="dolichol kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20401) or (E_subulatus_20402)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6129</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DOLICHOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DSERDEAM__45__RXN" name="D-serine ammonia-lyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05629) or (E_subulatus_05630) or (E_subulatus_08899)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__SERINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DTDPDEHYDRHAMEPIM__45__RXN" name="dTDP-4-dehydrorhamnose 3,5-epimerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02254)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: DTDPRHAMSYN-PWY , PWY-7814 , PWY-7301</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DTDP__45__DEOH__45__DEOXY__45__GLUCOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DTDP__45__DEOH__45__DEOXY__45__MANNOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DTDPDEHYRHAMREDUCT__45__RXN" name="dTDP-&amp;alpha;-L-rhamnose synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02254)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: DTDPRHAMSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DTDP__45__RHAMNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DTDP__45__DEOH__45__DEOXY__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DTDPGLUCDEHYDRAT__45__RXN" name="dTDP-glucose 4,6-dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18893) or (E_subulatus_21311) or (E_subulatus_18894)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7315 , PWY-6808 , PWY-6974 , PWY-7688 , PWY-7312 , PWY-7301 , PWY-7414 , PWY-7104 , PWY-7814 , PWY-7318 , PWY-7657 , PWY-7413 , PWY-7440 , PWY-6953 , PWY-6973 , PWY-6976 , DTDPRHAMSYN-PWY , PWY-6942 , PWY-7316</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DTDP__45__D__45__GLUCOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DTDP__45__DEOH__45__DEOXY__45__GLUCOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DTDPKIN__45__RXN" name="dTDP kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_03750) or (E_subulatus_23205) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_03631) or (E_subulatus_19893) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7187 , PWY0-166 , PWY-7184 , PWY-7197 , PWY-7198 , PWY-6545 , PWY-7210</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_TTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DTDPRHAMSYNTHMULTI__45__RXN" name="DTDPRHAMSYNTHMULTI-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1218_11a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DTDP__45__RHAMNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DTDP__45__DEOH__45__DEOXY__45__GLUCOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DTMPKI__45__RXN" name="dTMP kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14023) or (E_subulatus_14022)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7187 , PWY0-166 , PWY-7184 , PWY-7197 , PWY-7198 , PWY-6545 , PWY-7210</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DUDPKIN__45__RXN" name="dUDP kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_03750) or (E_subulatus_23205) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_19893) or (E_subulatus_03631) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7184 , PWY0-166 , PWY-6545</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DUDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DUTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DUTP__45__PYROP__45__RXN" name="deoxyuridine triphosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_19996) or (E_subulatus_16057) or (E_subulatus_10507) or (E_subulatus_16985) or (E_subulatus_02580) or (E_subulatus_01318) or (E_subulatus_16056) or (E_subulatus_19998) or (E_subulatus_19997)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7187 , PWY-7184 , PWY0-166 , PWY-6545 , PWY-7206</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DUTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DUMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_DXS__45__RXN" name="1-deoxy-D-xylulose-5-phosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17630)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PYRIDOXSYN-PWY , NONMEVIPP-PWY , PWY-7560 , PWY-6891 , PWY-6892</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DEOXYXYLULOSE__45__5P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ENOYL__45__ACP__45__REDUCT__45__NADH__45__RXN" name="2,3,4-saturated fatty acyl-[acp]:NAD+ oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: FASYN-ELONG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TRANS__45__D2__45__ENOYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Saturated__45__Fatty__45__Acyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ENOYL__45__ACP__45__REDUCT__45__NADPH__45__RXN" name="2,3,4-saturated fatty acyl-[acp] dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: FASYN-ELONG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TRANS__45__D2__45__ENOYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Saturated__45__Fatty__45__Acyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ENOYL__45__COA__45__HYDRAT__45__RXN" name="enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19620) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-391 , PWY-5138 , PWY-7007 , FAO-PWY , PWY-5136</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TRANS__45__D2__45__ENOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__3__45__HYDROXYACYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ENTDB__45__RXN" name="holo-[acyl-carrier-protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01014) or (E_subulatus_12579) or (E_subulatus_01013) or (E_subulatus_17853) or (E_subulatus_12578) or (E_subulatus_12580) or (E_subulatus_12581) or (E_subulatus_12582)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ENTBACSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Apo__45__EntB_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Holo__45__EntB_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ENZRXN__45__201__45__RXN" name="butanal reductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03981) or (E_subulatus_04997) or (E_subulatus_02174) or (E_subulatus_03980) or (E_subulatus_04999) or (E_subulatus_16044) or (E_subulatus_03982) or (E_subulatus_16048) or (E_subulatus_16049) or (E_subulatus_23526) or (E_subulatus_16047) or (E_subulatus_16045) or (E_subulatus_04998) or (E_subulatus_16046) or (E_subulatus_02173) or (E_subulatus_02175) or (E_subulatus_02945)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6583</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BUTANOL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BUTANAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ETHANOLAMINE__45__KINASE__45__RXN" name="ETHANOLAMINE-KINASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-3385 , PWY4FS-6 , PWY-7782</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETHANOL__45__AMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHORYL__45__ETHANOLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ETHANOLAMINEPHOSPHOTRANSFERASE__45__RXN" name="ETHANOLAMINEPHOSPHOTRANSFERASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY4FS-6</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CDP__45__ETHANOLAMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__PHOSPHATIDYL__45__ETHANOLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__ACP" name="ExchangeSeed-ACP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__ADENOSYLCOBALAMIN" name="ExchangeSeed-ADENOSYLCOBALAMIN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADENOSYLCOBALAMIN_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYLCOBALAMIN_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__ADP" name="ExchangeSeed-ADP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__AMMONIA" name="ExchangeSeed-AMMONIA" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMMONIA_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIA_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__AMP" name="ExchangeSeed-AMP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__ATP" name="ExchangeSeed-ATP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ATP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__Acceptor" name="ExchangeSeed-Acceptor" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Acceptor_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Acceptor_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__BIOTIN" name="ExchangeSeed-BIOTIN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BIOTIN_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BIOTIN_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__CA__43__2" name="ExchangeSeed-CA+2" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CA__43__2_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CA__43__2_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__CARBON__45__DIOXIDE" name="ExchangeSeed-CARBON-DIOXIDE" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CARBON__45__DIOXIDE_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__CL__45__" name="ExchangeSeed-CL-" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CL__45___C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CL__45___e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__CO__43__2" name="ExchangeSeed-CO+2" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__43__2_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__43__2_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__COB__45__I__45__ALAMIN" name="ExchangeSeed-COB-I-ALAMIN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_COB__45__I__45__ALAMIN_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_COB__45__I__45__ALAMIN_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__CPD__45__3" name="ExchangeSeed-CPD-3" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__3_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__3_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__CPD__45__315" name="ExchangeSeed-CPD-315" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__315_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__315_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__CU__43__" name="ExchangeSeed-CU+" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CU__43___C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CU__43___e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__CU__43__2" name="ExchangeSeed-CU+2" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CU__43__2_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CU__43__2_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__Donor__45__H2" name="ExchangeSeed-Donor-H2" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Donor__45__H2_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Donor__45__H2_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__EDTA" name="ExchangeSeed-EDTA" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_EDTA_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_EDTA_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__FE__43__2" name="ExchangeSeed-FE+2" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FE__43__2_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FE__43__2_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__FE__43__3" name="ExchangeSeed-FE+3" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FE__43__3_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FE__43__3_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__FERRICYTOCHROME__45__B5" name="ExchangeSeed-FERRICYTOCHROME-B5" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__FERROCYTOCHROME__45__B5" name="ExchangeSeed-FERROCYTOCHROME-B5" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__GDP" name="ExchangeSeed-GDP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GDP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__GTP" name="ExchangeSeed-GTP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GTP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__HYDROGEN__45__PEROXIDE" name="ExchangeSeed-HYDROGEN-PEROXIDE" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__K__43__" name="ExchangeSeed-K+" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_K__43___C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_K__43___e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__Light" name="ExchangeSeed-Light" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Light_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Light_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__MG__43__2" name="ExchangeSeed-MG+2" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MG__43__2_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MG__43__2_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__MN__43__2" name="ExchangeSeed-MN+2" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MN__43__2_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MN__43__2_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__NA__43__" name="ExchangeSeed-NA+" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NA__43___C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NA__43___e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__NAD" name="ExchangeSeed-NAD" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__NAD__45__P__45__OR__45__NOP" name="ExchangeSeed-NAD-P-OR-NOP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__NADH" name="ExchangeSeed-NADH" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__NADH__45__P__45__OR__45__NOP" name="ExchangeSeed-NADH-P-OR-NOP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__NADP" name="ExchangeSeed-NADP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__NADPH" name="ExchangeSeed-NADPH" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADPH_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__NITRATE" name="ExchangeSeed-NITRATE" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NITRATE_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NITRATE_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__OXYGEN__45__MOLECULE" name="ExchangeSeed-OXYGEN-MOLECULE" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXYGEN__45__MOLECULE_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__PPI" name="ExchangeSeed-PPI" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PPI_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__PROTON" name="ExchangeSeed-PROTON" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__Pi" name="ExchangeSeed-Pi" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Pi_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__SULFATE" name="ExchangeSeed-SULFATE" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SULFATE_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SULFATE_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__THIAMINE" name="ExchangeSeed-THIAMINE" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THIAMINE_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THIAMINE_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__UDP" name="ExchangeSeed-UDP" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__WATER" name="ExchangeSeed-WATER" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ExchangeSeed__45__ZN__43__2" name="ExchangeSeed-ZN+2" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ZN__43__2_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ZN__43__2_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_Exchange_BIOMASS" name="Exchange_BIOMASS" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BIOMASS_e" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BIOMASS_C__45__BOUNDARY" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_F16ALDOLASE__45__RXN" name="fructose-bisphosphate aldolase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15857) or (E_subulatus_09283) or (E_subulatus_09282) or (E_subulatus_04830) or (E_subulatus_09284) or (E_subulatus_09281) or (E_subulatus_15858) or (E_subulatus_20714) or (E_subulatus_09285)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P185-PWY , PWY-1042 , SUCSYN-PWY , ANAGLYCOLYSIS-PWY , PWY-5484 , GLYCOLYSIS , P341-PWY , CALVIN-PWY , PWY-1861 , PWY-6142 , GLUCONEO-PWY , PWY66-399 , PWY-7385</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FRUCTOSE__45__16__45__DIPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_F16BDEPHOS__45__RXN" name="fructose 1,6-bisphosphate 1-phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20213) or (E_subulatus_13101) or (E_subulatus_15379) or (E_subulatus_19321) or (E_subulatus_20214) or (E_subulatus_20211) or (E_subulatus_12063) or (E_subulatus_15378) or (E_subulatus_12062) or (E_subulatus_12060) or (E_subulatus_16321) or (E_subulatus_20212) or (E_subulatus_12061)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: P185-PWY , PWY-5484 , GLYCOLYSIS , SUCSYN-PWY , CALVIN-PWY , GLUCONEO-PWY , PWY66-399</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FRUCTOSE__45__16__45__DIPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FADSYN__45__RXN" name="FMN adenylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15520) or (E_subulatus_15521)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6168 , PWY-6167 , PWY66-366 , RIBOSYN2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FMN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FARNESYLTRANSTRANSFERASE__45__RXN" name="geranylgeranyl diphosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14925) or (E_subulatus_14923) or (E_subulatus_14924) or (E_subulatus_00014) or (E_subulatus_18294) or (E_subulatus_18225) or (E_subulatus_01843) or (E_subulatus_14926)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6659 , PWY-7492 , PWY-6691 , PWY-7517 , PWY-7720 , PWY-7721 , PWY-5120 , PWY-7736</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FARNESYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DELTA3__45__ISOPENTENYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GERANYLGERANYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FATTY__45__ACID__45__SYNTHASE__45__RXN" name="acyl-CoA:malonyl-CoA C-acyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Long__45__Chain__45__Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FERREDOXIN__45____45__NITRITE__45__REDUCTASE__45__RXN" name="FERREDOXIN--NITRITE-REDUCTASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14758)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY490-3 , PWY-381</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NITRITE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__ferredoxins_c" stoichiometry="6" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="8" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Oxidized__45__ferredoxins_c" stoichiometry="6" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FESGSHTHIO__45__RXN" name="S-sulfanylglutathione dioxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17203) or (E_subulatus_10327) or (E_subulatus_14503) or (E_subulatus_10328) or (E_subulatus_17202) or (E_subulatus_10329)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: SULFUROX-PWY , PWY-5285 , PWY-7927</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11281_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17866_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FESO3OXI__45__RXN" name="FESO3OXI-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: FESULFOX-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FE__43__3_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_SULFATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FE__43__2_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FGAMSYN__45__RXN" name="phosphoribosylformylglycinamide synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11384) or (E_subulatus_11385) or (E_subulatus_11386)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6122 , PWY-6121 , PWY-6277</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__P__45__RIBOSYL__45__N__45__FORMYLGLYCINEAMIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__PHOSPHORIBOSYL__45__N__45__FORMYLGLYCINEAMIDINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FLAVONADPREDUCT__45__RXN" name="FLAVONADPREDUCT-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1596_3a) or (EsuBft426_19a) or (EsuBft48_17a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__flavodoxins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__flavodoxins_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FOLYLPOLYGLUTAMATESYNTH__45__RXN" name="tetrahydrofolylpolyglutamate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09050) or (E_subulatus_24089) or (E_subulatus_24090) or (E_subulatus_09048) or (E_subulatus_24088) or (E_subulatus_09049) or (E_subulatus_24087)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2161</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FORMATETHFLIG__45__RXN" name="formate:tetrahydropteroylpolyglutamate ligase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18694) or (E_subulatus_18693)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2161 , CODH-PWY , PWY-3841 , PWY-1722 , PWY-2201</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FORMYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FORMYLTHFDEFORMYL__45__RXN" name="FORMYLTHFDEFORMYL-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: P164-PWY , PWY-2201 , PWY-5497</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FORMYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FORMYLTHFGLUSYNTH__45__RXN" name="tetrahydrofolylpolyglutamate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09050) or (E_subulatus_24089) or (E_subulatus_09048) or (E_subulatus_24088) or (E_subulatus_09049) or (E_subulatus_24090) or (E_subulatus_24087)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2161</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FORMYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FORMYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FRUCTOKINASE__45__RXN" name="manno(fructo)kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05978)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: SUCUTIL-PWY , PWY-621 , P122-PWY , PWY-3801 , PWY-6531 , PWY-5384 , PWY-4101 , SUCROSEUTIL2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BETA__45__D__45__FRUCTOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FUCOKINASE__45__RXN" name="FUCOKINASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft95_15a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__Fucopyranoses_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__488_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FUMARATE__45__REDUCTASE__45__NADH__45__RXN" name="FUMARATE-REDUCTASE-NADH-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00074) or (E_subulatus_00075)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_FUMHYDR__45__RXN" name="fumarase C" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14960) or (E_subulatus_14958) or (E_subulatus_03391) or (E_subulatus_14959)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: P105-PWY , PWY-6969 , P108-PWY , P42-PWY , FERMENTATION-PWY , PWY-7384 , PWY-5690 , PWY66-398 , PWY-5392 , PWY-7254 , PWY-5913 , PWY-6728 , PWY-561 , TCA , P23-PWY , REDCITCYC</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MAL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GALACTOKIN__45__RXN" name="galactokinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11918) or (E_subulatus_15511)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6317 , PWY-3821 , PWY-6527 , PWY66-422</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ALPHA__45__D__45__GALACTOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GALACTOSE__45__1P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GALACTOSIDE__45__3__45__FUCOSYLTRANSFERASE__45__RXN" name="&amp;alpha;-(1,3)-fucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17772) or (E_subulatus_23387) or (E_subulatus_23388) or (E_subulatus_07184)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7833 , PWY-7831</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13118_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_B__45__Gal__45__14__45__NacGlc__45__R_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8594_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GALACTOSYLCERAMIDE__45__SULFOTRANSFERASE__45__RXN" name="galactosylceramide sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07829) or (E_subulatus_24119) or (E_subulatus_04081) or (E_subulatus_07830) or (E_subulatus_14819) or (E_subulatus_19052) or (E_subulatus_00904) or (E_subulatus_19053) or (E_subulatus_02794) or (E_subulatus_04083) or (E_subulatus_01999) or (E_subulatus_04086) or (E_subulatus_04088) or (E_subulatus_16624) or (E_subulatus_07602) or (E_subulatus_07828) or (E_subulatus_25735) or (E_subulatus_19919) or (E_subulatus_04085) or (E_subulatus_04087) or (E_subulatus_24118) or (E_subulatus_04084) or (E_subulatus_06073) or (E_subulatus_05887) or (E_subulatus_16625) or (E_subulatus_01998) or (E_subulatus_04089) or (E_subulatus_04080) or (E_subulatus_00905) or (E_subulatus_05888) or (E_subulatus_04082)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cerebrosides_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GALACTOSYLCERAMIDE__45__SULFATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GALACTURIDYLYLTRANS__45__RXN" name="GALACTURIDYLYLTRANS-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6317 , PWY-6527 , PWY66-422</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GALACTOSE__45__1P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14553_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GAMMA__45__GLUTAMYLTRANSFERASE__45__RXN" name="obsolete gamma-glutamyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06213) or (E_subulatus_10761)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__L__45__GLUTAMYL__45__PEPTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Amino__45__Acids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__L__45__GLUTAMYL__45__AMINO__45__ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Peptides__45__holder_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GAPDHSYNEC__45__RXN" name="glyceraldehyde 3-phosphate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04102) or (E_subulatus_04104) or (E_subulatus_04101) or (E_subulatus_04103)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DPG_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GAPOXNPHOSPHN__45__RXN" name="glyceraldehyde-3-phosphate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21064) or (E_subulatus_05268) or (E_subulatus_05269) or (E_subulatus_21065) or (E_subulatus_05270) or (E_subulatus_22629) or (E_subulatus_21066) or (E_subulatus_21067)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-399 , P124-PWY , P185-PWY , PWY-1042 , P122-PWY , ANAGLYCOLYSIS-PWY , PWY-5484 , GLYCOLYSIS , SUCSYN-PWY , PWY-6901 , PWY-7003 , GLUCONEO-PWY , PWY-8004</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DPG_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GART__45__RXN" name="phosphoribosylglycinamide formyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14591)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6613 , PWY-6121</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FORMYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__PHOSPHO__45__RIBOSYL__45__GLYCINEAMIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__P__45__RIBOSYL__45__N__45__FORMYLGLYCINEAMIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GCVMULTI__45__RXN" name="GCVMULTI-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-3841 , 1CMET2-PWY , PWY-2201 , PWY-181</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GCVMULTI__45__RXN__45__GLY__47__THF__47__NAD__47____47__METHYLENE__45__THF__47__AMMONIUM__47__CARBON__45__DIOXIDE__47__NADH__46__56__46__" name="GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56." reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THF_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHYLENE__45__THF_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GCVP__45__RXN" name="glycine decarboxylase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02305) or (E_subulatus_18735)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLYCLEAV-PWY , GLYCINE-SYN2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTEIN__45__LIPOYLLYSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMINOMETHYLDIHYDROLIPOYL__45__GCVH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GCVT__45__RXN" name="aminomethyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02310) or (E_subulatus_02307) or (E_subulatus_02306) or (E_subulatus_02308) or (E_subulatus_02309)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLYCLEAV-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMINOMETHYLDIHYDROLIPOYL__45__GCVH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIHYDROLIPOYL__45__GCVH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GDP__45__4__45__DEHYDRO__45__D__45__RHAMNOSE__45__REDUCTASE__45__RXN" name="GDP-4-dehydro-D-rhamnose reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01075) or (E_subulatus_07774) or (E_subulatus_07773) or (E_subulatus_19816)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GDPRHAMSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP__45__4__45__DEHYDRO__45__6__45__DEOXY__45__D__45__MANNOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__353_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GDP__45__6__45__DEOXY__45__D__45__TALOSE__45__4__45__DEHYDROGENASE__45__RXN" name="GDP-4-keto-6-deoxy-D-mannose reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01075) or (E_subulatus_07774) or (E_subulatus_07773) or (E_subulatus_19816)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5738</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP__45__4__45__DEHYDRO__45__6__45__DEOXY__45__D__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__354_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GDP__45__MANNOSE__45__6__45__DEHYDROGENASE__45__RXN" name="GDP-mannose 6-dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15827) or (E_subulatus_15828) or (E_subulatus_19639) or (E_subulatus_19638) or (E_subulatus_24910)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6082 , PWY-6073</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_CPD__45__1828_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GDPKIN__45__RXN" name="GDP kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_03750) or (E_subulatus_23205) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_19893) or (E_subulatus_03631) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PPGPPMET-PWY , PWY-7221</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GDPMANDEHYDRA__45__RXN" name="GDP-mannose 4,6-dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25024) or (E_subulatus_05534) or (E_subulatus_06684) or (E_subulatus_06683) or (E_subulatus_06681) or (E_subulatus_06682)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7573 , PWY-5738 , PWY-5739 , PWY-66 , PWY-5740 , GDPRHAMSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GDP__45__4__45__DEHYDRO__45__6__45__DEOXY__45__D__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GDPPYPHOSKIN__45__RXN" name="GDP pyrophosphokinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16060)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PPGPPMET-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GUANOSINE__45__5DP__45__3DP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GDPREDUCT__45__RXN" name="GDP reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16358) or (E_subulatus_11791) or (E_subulatus_15745) or (E_subulatus_25204) or (E_subulatus_16363) or (E_subulatus_20463) or (E_subulatus_16359) or (E_subulatus_17310) or (E_subulatus_20465) or (E_subulatus_17311) or (E_subulatus_16362) or (E_subulatus_15746) or (E_subulatus_15977) or (E_subulatus_17312) or (E_subulatus_17309) or (E_subulatus_25205) or (E_subulatus_07744) or (E_subulatus_07745) or (E_subulatus_18208) or (E_subulatus_16360) or (E_subulatus_16361) or (E_subulatus_20464)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7222 , PWY-7226</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DGDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLU6PDEHYDROG__45__RXN" name="GLU6PDEHYDROG-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: OXIDATIVEPENT-PWY , RUMP-PWY , GLYCOLYSIS-E-D , P122-PWY , PWY-7268</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__glucopyranose__45__6__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__6__45__P__45__GLUCONO__45__DELTA__45__LACTONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUC1PADENYLTRANS__45__RXN" name="glucose-1-phosphate adenylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22149) or (E_subulatus_22148)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLYCOGENSYNTH-PWY , PWY-622 , PWY-7902</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP__45__D__45__GLUCOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUC1PURIDYLTRANS__45__RXN" name="UTP&amp;mdash;glucose-1-phosphate uridylyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11660) or (E_subulatus_11661) or (E_subulatus_20369)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3801 , PWY-7343 , PWY-7817 , PWY-7238 , PWY-6527</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUCOKIN__45__RXN" name="glucokinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13557) or (E_subulatus_13559) or (E_subulatus_13558)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1182 , TREDEGLOW-PWY , P124-PWY , PWY-621 , UDPNACETYLGALSYN-PWY , P122-PWY , ANAGLYCOLYSIS-PWY , PWY-5941 , PWY-2723 , GLUCOSE1PMETAB-PWY , PWY-2722 , PWY-7238 , PWY-5661 , PWY-7385 , PWY-5514 , GLYCOCAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__glucopyranose__45__6__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUCONATE__45__5__45__DEHYDROGENASE__45__RXN" name="5-keto-D-gluconate 5-reductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17329)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: IDNCAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLUCONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__DEHYDROGLUCONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUCOSAMINEPNACETYLTRANS__45__RXN" name="GLUCOSAMINEPNACETYLTRANS-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5514 , UDPNACETYLGALSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__GLUCOSAMINE__45__6__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__6__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUCOSE__45__1__45__PHOSPHAT__45__RXN" name="GLUCOSE-1-PHOSPHAT-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: GLUCOSE1PMETAB-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUCOSE__45__16__45__BISPHOSPHATE__45__SYNTHASE__45__RXN" name="GLUCOSE-16-BISPHOSPHATE-SYNTHASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20342) or (E_subulatus_07640) or (E_subulatus_07638) or (E_subulatus_20343) or (E_subulatus_07642) or (E_subulatus_07641) or (E_subulatus_07639)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DPG_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ALPHA__45__GLUCOSE__45__16__45__BISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_G3P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLURS__45__RXN" name="glutamate&amp;mdash;tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07603) or (E_subulatus_07604) or (E_subulatus_07605) or (E_subulatus_13619) or (E_subulatus_05367) or (E_subulatus_17390) or (E_subulatus_12907) or (E_subulatus_07606) or (E_subulatus_12906) or (E_subulatus_12908)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY , PWY-5188</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLT__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__GLT__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMATE__45__DEHYDROGENASE__45__NADP__43____45__RXN" name="glutamate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22259) or (E_subulatus_17368)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5766 , GLUDEG-I-PWY , ARGININE-SYN4-PWY , GLUTAMATE-SYN2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMATE__45__DEHYDROGENASE__45__RXN" name="glutamate dehydrogenase (NAD+)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22259) or (E_subulatus_17368) or (E_subulatus_25171) or (E_subulatus_25172)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: GLUTAMATE-DEG1-PWY , PWY-5022 , PWY-7126 , P162-PWY , ALACAT2-PWY , PWY-6728</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMATE__45__N__45__ACETYLTRANSFERASE__45__RXN" name="glutamate N-acetyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23761) or (E_subulatus_23762) or (E_subulatus_23759) or (E_subulatus_23758) or (E_subulatus_23760)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ARGSYNBSUB-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ALPHA__45__ACETYLORNITHINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__GLU_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ORNITHINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMATE__45__SYNTHASE__45__FERREDOXIN__45__RXN" name="glutamate synthase (ferredoxin)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13550) or (E_subulatus_17838)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4341 , PWY-6964 , PWY-6549</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Oxidized__45__ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMATE__45__SYNTHASE__45__NADH__45__RXN" name="glutamate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17841) or (E_subulatus_17839) or (E_subulatus_17843) or (E_subulatus_18043) or (E_subulatus_18044) or (E_subulatus_17840) or (E_subulatus_02880) or (E_subulatus_17838) or (E_subulatus_18042) or (E_subulatus_13504) or (E_subulatus_17842) or (E_subulatus_17844)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6963 , GLUGLNSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMATESYN__45__RXN" name="GLUTAMATESYN-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17838)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: GLUTSYN-PWY , GLUTAMINEFUM-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMIDOTRANS__45__RXN" name="imidazoleglycerol-phosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12825)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHORIBULOSYL__45__FORMIMINO__45__AICAR__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__ERYTHRO__45__IMIDAZOLE__45__GLYCEROL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AICAR_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMIN__45__RXN" name="glutaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15542) or (E_subulatus_09531) or (E_subulatus_02876) or (E_subulatus_09532) or (E_subulatus_13550) or (E_subulatus_22802) or (E_subulatus_06834) or (E_subulatus_09216) or (E_subulatus_00581) or (E_subulatus_22039) or (E_subulatus_18595) or (E_subulatus_11886) or (E_subulatus_11885) or (E_subulatus_18250) or (E_subulatus_02874) or (E_subulatus_06838) or (E_subulatus_11888) or (E_subulatus_11887) or (E_subulatus_11884) or (E_subulatus_09215) or (E_subulatus_06836) or (E_subulatus_09214) or (E_subulatus_02877) or (E_subulatus_12825) or (E_subulatus_06835) or (E_subulatus_15541) or (E_subulatus_02875) or (E_subulatus_06837) or (E_subulatus_22040) or (E_subulatus_22870) or (E_subulatus_00580)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLUTAMINDEG-PWY , PWY490-4 , CITRULBIO-PWY , PWY-5921</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMINE__45____45__PYRUVATE__45__AMINOTRANSFERASE__45__RXN" name="GLUTAMINE--PYRUVATE-AMINOTRANSFERASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20406)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__KETO__45__GLUTARAMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMINE__45____45__TRNA__45__LIGASE__45__RXN" name="GLUTAMINE--TRNA-LIGASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__GLN__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMINESYN__45__RXN" name="glutamine synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20185) or (E_subulatus_12328) or (E_subulatus_05756) or (E_subulatus_20186) or (E_subulatus_12330) or (E_subulatus_12329) or (E_subulatus_12331) or (E_subulatus_05757)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: GLNSYN-PWY , PWY490-3 , PWY-381 , PWY-6964 , PWY-6963 , PWY-5675 , PWY-6549</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTAMINYL__45__PEPTIDE__45__CYCLOTRANSFERASE__45__RXN" name="GLUTAMINYL-PEPTIDE-CYCLOTRANSFERASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft525_20a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Glutaminyl__45__Peptides_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__OXOPROLYL__45__PEPTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTARATE__45__SEMIALDEHYDE__45__DEHYDROGENASE__45__RXN" name="GLUTARATE-SEMIALDEHYDE-DEHYDROGENASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_03414)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: LYSDEGII-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__280_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTATHIONE__45__PEROXIDASE__45__RXN" name="glutathione peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04261) or (E_subulatus_18794) or (E_subulatus_04259) or (E_subulatus_18549) or (E_subulatus_21221) or (E_subulatus_18793) or (E_subulatus_04260) or (E_subulatus_04262) or (E_subulatus_18548) or (E_subulatus_21220)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: DETOX1-PWY-1 , PWY-4081</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXIDIZED__45__GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTATHIONE__45__REDUCT__45__NADPH__45__RXN" name="glutathione reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09691) or (E_subulatus_04500)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4081</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXIDIZED__45__GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTATHIONE__45__SYN__45__RXN" name="glutathione synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21920) or (E_subulatus_21919)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: GLUTATHIONESYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__GAMMA__45__GLUTAMYLCYSTEINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTCYSLIG__45__RXN" name="glutamate&amp;mdash;cysteine ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11415) or (E_subulatus_11417) or (E_subulatus_11416)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7255 , GLUTATHIONESYN-PWY , PWY-6840</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__GAMMA__45__GLUTAMYLCYSTEINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTDEHYD__45__RXN" name="glutamate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17368) or (E_subulatus_22259)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5913 , GLUTSYNIII-PWY , PWY490-3 , PWY-5675</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTKIN__45__RXN" name="glutamate 5-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00191) or (E_subulatus_00192) or (E_subulatus_19234)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PROSYN-PWY , PWY-6922 , CITRULBIO-PWY , ARGININE-SYN4-PWY , PWY-3341</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__GLUTAMATE__45__5__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTRNAREDUCT__45__RXN" name="glutamyl-tRNA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21684) or (E_subulatus_21685) or (E_subulatus_21682) or (E_subulatus_21683)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5188</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Charged__45__GLT__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLUTAMATE__45__1__45__SEMIALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLUTSEMIALDEHYDROG__45__RXN" name="glutamate-5-semialdehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00191) or (E_subulatus_00192)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PROSYN-PWY , PWY-6922 , CITRULBIO-PWY , ARGININE-SYN4-PWY , PWY-3341</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__GLUTAMATE__45__5__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__GLUTAMATE_GAMMA__45__SEMIALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYC3PDEHYDROGBIOSYN__45__RXN" name="glycerol-3-phosphate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11786) or (E_subulatus_07294) or (E_subulatus_04109) or (E_subulatus_06478) or (E_subulatus_06480) or (E_subulatus_04110) or (E_subulatus_06481) or (E_subulatus_04111) or (E_subulatus_07295) or (E_subulatus_06479) or (E_subulatus_11787) or (E_subulatus_19994)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1319 , PWY-7902 , PWY-5981 , PWY-5667</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYCEROL__45__KIN__45__RXN" name="glycerol kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06768)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYCERONE__45__KINASE__45__RXN" name="glycerone kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25010) or (E_subulatus_25011) or (E_subulatus_25006) or (E_subulatus_25005) or (E_subulatus_25012) or (E_subulatus_25009) or (E_subulatus_25007) or (E_subulatus_25008)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6131 , P185-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROXYACETONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYCINE__45____45__TRNA__45__LIGASE__45__RXN" name="glycine-tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03226) or (E_subulatus_15126)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLY__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__GLY__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYCINE__45__AMINOTRANSFERASE__45__RXN" name="glycine transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06213)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-181</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYOX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYCOPHOSPHORYL__45__RXN" name="glycogen phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5941 , GLYCOCAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Glycogens_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__971_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYCOPROTEIN__45__PHOSPHOLIPASE__45__D__45__RXN" name="glycosylphosphatidylinositol phospholipase D" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25604) or (E_subulatus_25603)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1113_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__PHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1G__45__0_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYCPDIESTER__45__RXN" name="glycerophosphodiester phosphodiesterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19386) or (E_subulatus_19387) or (E_subulatus_19388) or (E_subulatus_19385) or (E_subulatus_19384)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6952</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerophosphodiesters_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Alcohols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYMALTOPHOSPHORYL__45__RXN" name="GLYMALTOPHOSPHORYL-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Glycogens_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MALTOTETRAOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYOHMETRANS__45__RXN" name="5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23643) or (E_subulatus_11692) or (E_subulatus_01358)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2161 , 1CMET2-PWY , PWY-3661 , PWY-181 , PWY-3841 , PWY-5497 , PWY-1622 , GLYSYN-PWY , PWY-2201 , PWY-3661-1</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYOHMETRANS__45__RXN__45__SER__47__THF__47____47__GLY__47__METHYLENE__45__THF__47__WATER__46__33__46__" name="GLYOHMETRANS-RXN-SER/THF//GLY/METHYLENE-THF/WATER.33." reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THF_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_METHYLENE__45__THF_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYOXI__45__RXN" name="lactoylglutathione lyase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23228) or (E_subulatus_17365)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5386</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__LACTOYL__45__GLUTATHIONE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_METHYL__45__GLYOXAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYOXII__45__RXN" name="hydroxyacylglutathione hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22822) or (E_subulatus_06892) or (E_subulatus_02795) or (E_subulatus_06890) or (E_subulatus_02797) or (E_subulatus_06891) or (E_subulatus_05989) or (E_subulatus_02796)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5386</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__LACTOYL__45__GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__LACTATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYOXIII__45__RXN" name="glyoxalase III" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20829)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYL__45__GLYOXAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__LACTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYOXYLATE__45__OXIDASE__45__RXN" name="GLYOXYLATE-OXIDASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23904) or (E_subulatus_23906) or (E_subulatus_19878) or (E_subulatus_06725) or (E_subulatus_23903) or (E_subulatus_23908) or (E_subulatus_23907) or (E_subulatus_19877) or (E_subulatus_23905) or (E_subulatus_19876) or (E_subulatus_06724)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLYOX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXALATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYOXYLATE__45__REDUCTASE__45__NADP__43____45__RXN" name="glyoxylate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20831) or (E_subulatus_09945)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLYOX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCOLLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GLYRIBONUCSYN__45__RXN" name="phosphoribosylamine-glycine ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14591)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6122 , PWY-6121 , PWY-6277</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__P__45__BETA__45__D__45__RIBOSYL__45__AMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__PHOSPHO__45__RIBOSYL__45__GLYCINEAMIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GMKALT__45__RXN" name="GMKALT-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7224</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DGMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DGDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GMP__45__SYN__45__GLUT__45__RXN" name="xanthosine-5&apos;-phosphate:L-glutamine amido-ligase (AMP-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06838) or (E_subulatus_06835) or (E_subulatus_06837) or (E_subulatus_09215) or (E_subulatus_06836) or (E_subulatus_06834) or (E_subulatus_09214) or (E_subulatus_18250) or (E_subulatus_09216)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7221</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_XANTHOSINE__45__5__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GMP__45__SYN__45__NH3__45__RXN" name="xanthosine-5&apos;-phosphate:ammonia ligase (AMP-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06835) or (E_subulatus_06837) or (E_subulatus_09215) or (E_subulatus_06836) or (E_subulatus_06834) or (E_subulatus_09214) or (E_subulatus_18250) or (E_subulatus_06838) or (E_subulatus_09216)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_XANTHOSINE__45__5__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GPH__45__RXN" name="phosphoglycolate phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15399) or (E_subulatus_00047) or (E_subulatus_01178) or (E_subulatus_08269) or (E_subulatus_05164) or (E_subulatus_00366) or (E_subulatus_05161) or (E_subulatus_16971) or (E_subulatus_25824) or (E_subulatus_19152) or (E_subulatus_06959) or (E_subulatus_00837) or (E_subulatus_09293) or (E_subulatus_20806) or (E_subulatus_22647) or (E_subulatus_10538) or (E_subulatus_00730) or (E_subulatus_10537) or (E_subulatus_22874) or (E_subulatus_15519) or (E_subulatus_25826) or (E_subulatus_15406) or (E_subulatus_01570) or (E_subulatus_06784) or (E_subulatus_00006) or (E_subulatus_06783) or (E_subulatus_24394) or (E_subulatus_15398) or (E_subulatus_07651) or (E_subulatus_15518) or (E_subulatus_05162) or (E_subulatus_13232) or (E_subulatus_15370) or (E_subulatus_00729) or (E_subulatus_15368) or (E_subulatus_02809) or (E_subulatus_00732) or (E_subulatus_02481) or (E_subulatus_13233) or (E_subulatus_07652) or (E_subulatus_00728) or (E_subulatus_22331) or (E_subulatus_15397) or (E_subulatus_06388) or (E_subulatus_13483) or (E_subulatus_22079) or (E_subulatus_22646) or (E_subulatus_13234) or (E_subulatus_21424) or (E_subulatus_04529) or (E_subulatus_19259) or (E_subulatus_24006) or (E_subulatus_21423) or (E_subulatus_09292) or (E_subulatus_15369) or (E_subulatus_15367) or (E_subulatus_21808) or (E_subulatus_01179) or (E_subulatus_10536) or (E_subulatus_05121) or (E_subulatus_05163) or (E_subulatus_07650) or (E_subulatus_21809) or (E_subulatus_25825)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-181</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__67_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCOLLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GPPSYN__45__RXN" name="geranyl diphosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01544) or (E_subulatus_01545) or (E_subulatus_01546) or (E_subulatus_21262) or (E_subulatus_22336) or (E_subulatus_13199) or (E_subulatus_01208) or (E_subulatus_05634) or (E_subulatus_22337) or (E_subulatus_24160) or (E_subulatus_01543)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7141 , PWY-7410 , PWY-5122 , PWY-7659 , PWY-7709 , PWY-5123 , PWY-6859 , PWY-6383 , PWY-7102 , PWY-7182 , PWY-7736</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__4211_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DELTA3__45__ISOPENTENYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GERANYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GSAAMINOTRANS__45__RXN" name="glutamate-1-semialdehyde aminotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14163)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5188</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLUTAMATE__45__1__45__SEMIALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__AMINO__45__LEVULINATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GSHTRAN__45__RXN" name="glutathione transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13975) or (E_subulatus_04261) or (E_subulatus_12836) or (E_subulatus_04259) or (E_subulatus_14266) or (E_subulatus_03320) or (E_subulatus_12834) or (E_subulatus_04260) or (E_subulatus_04262) or (E_subulatus_05002) or (E_subulatus_12835)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6842 , PWY-4061</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RX_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_S__45__Substituted__45__Glutathione_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HX_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GST__45__RXN" name="glutathione S-transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13975) or (E_subulatus_04261) or (E_subulatus_12836) or (E_subulatus_04259) or (E_subulatus_03320) or (E_subulatus_12834) or (E_subulatus_04260) or (E_subulatus_04262) or (E_subulatus_05002) or (E_subulatus_12835)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__CHLORO__45__24__45__DINITROBENZENE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__24__45__DINITROPHENYLGLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CL__45___c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GTP__45__CYCLOHYDRO__45__I__45__RXN" name="GTP cyclohydrolase I" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04937)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6983 , PWY-6147 , PWY-5663 , PWY-6703 , PWY0-1433 , PWY-7442 , PWY-5664 , PWY-7852</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIHYDRONEOPTERIN__45__P3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GTP__45__CYCLOHYDRO__45__II__45__RXN" name="GTP cyclohydrolase II" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04571) or (E_subulatus_18126) or (E_subulatus_04573) or (E_subulatus_18127) or (E_subulatus_04572)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7991 , PWY-6168 , RIBOSYN2-PWY , PWY-7539</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIAMINO__45__OH__45__PHOSPHORIBOSYLAMINO__45__PYR_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GTPPYPHOSKIN__45__RXN" name="GTP pyrophosphokinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16060)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PPGPPMET-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GDP__45__TP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GUANIDINOACETATE__45__N__45__METHYLTRANSFERASE__45__RXN" name="guanidinoacetate N-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16411)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLYCGREAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GUANIDOACETIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CREATINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GUANINE__45__DEAMINASE__45__RXN" name="guanine deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06189) or (E_subulatus_05923)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6608 , PWY-6606 , P164-PWY , PWY-5497</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GUANINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_XANTHINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GUANOSINE__45__DIPHOSPHATASE__45__RXN" name="GUANOSINE-DIPHOSPHATASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06847)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GUANYL__45__KIN__45__RXN" name="guanylate kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20804) or (E_subulatus_17421)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7221</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_GUANYLCYC__45__RXN" name="GUANYLCYC-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03275) or (E_subulatus_17731) or (E_subulatus_17730) or (E_subulatus_17726) or (E_subulatus_08934) or (E_subulatus_08935) or (E_subulatus_17729) or (E_subulatus_05951) or (E_subulatus_17727) or (E_subulatus_15892) or (E_subulatus_17728) or (E_subulatus_19743) or (E_subulatus_13162) or (E_subulatus_03276) or (E_subulatus_14467) or (E_subulatus_19745) or (E_subulatus_03277) or (E_subulatus_17732) or (E_subulatus_19744) or (E_subulatus_15893) or (E_subulatus_08936) or (E_subulatus_08937)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CGMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_H2NEOPTERINALDOL__45__RXN" name="H2NEOPTERINALDOL-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6797 , PWY-6148 , PWY-7539 , PWY-6147</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDRO__45__NEO__45__PTERIN_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMINO__45__OH__45__HYDROXYMETHYL__45__DIHYDROPTERIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCOLALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_H2NEOPTERINP3PYROPHOSPHOHYDRO__45__RXN" name="dihydroneopterin triphosphate pyrophosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20022) or (E_subulatus_02764) or (E_subulatus_11806) or (E_subulatus_25425) or (E_subulatus_12666) or (E_subulatus_19973) or (E_subulatus_04553) or (E_subulatus_19729) or (E_subulatus_20551) or (E_subulatus_22489) or (E_subulatus_06627) or (E_subulatus_05672) or (E_subulatus_09115) or (E_subulatus_15608) or (E_subulatus_00649) or (E_subulatus_24944) or (E_subulatus_23712) or (E_subulatus_20483) or (E_subulatus_02180) or (E_subulatus_21748) or (E_subulatus_09384) or (E_subulatus_09387) or (E_subulatus_09386) or (E_subulatus_09385)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6147</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDRONEOPTERIN__45__P3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDRONEOPTERIN__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_H2PTERIDINEPYROPHOSPHOKIN__45__RXN" name="2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05199) or (E_subulatus_05198)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6147 , PWY-6797 , PWY-7539 , PWY-7853 , PWY-7852</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMINO__45__OH__45__HYDROXYMETHYL__45__DIHYDROPTERIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDROPTERIN__45__CH2OH__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_H2PTEROATESYNTH__45__RXN" name="H2PTEROATESYNTH-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05198)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6614</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROPTERIN__45__CH2OH__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_P__45__AMINO__45__BENZOATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_7__45__8__45__DIHYDROPTEROATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HEME__45__OXYGENASE__45__DECYCLIZING__45__RXN" name="heme oxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20663)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5874</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTOHEME_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BILIVERDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FE__43__2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__MONOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="3" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HEMEOSYN__45__RXN" name="heme o biosynthesis" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00014)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7856</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTOHEME_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FARNESYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17063_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HEMN__45__RXN" name="HEMN-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13762)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5531 , HEMESYN2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_COPROPORPHYRINOGEN_III_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTOPORPHYRINOGEN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CH33ADO_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HEXOKINASE__45__RXN" name="HEXOKINASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1656_9a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__Hexoses_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__HEXOSE__45__6__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HISTALDEHYD__45__RXN" name="histidinol dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12595)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HISTIDINAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HIS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HISTAMINOTRANS__45__RXN" name="histidinol-phosphate transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17401) or (E_subulatus_17400)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__HISTIDINOL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_IMIDAZOLE__45__ACETOL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HISTCYCLOHYD__45__RXN" name="phosphoribosyl-AMP cyclohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24035) or (E_subulatus_24036) or (E_subulatus_24037)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHORIBOSYL__45__AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHORIBOSYL__45__FORMIMINO__45__AICAR__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HISTIDINE__45____45__TRNA__45__LIGASE__45__RXN" name="histidine&amp;mdash;tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18431) or (E_subulatus_18430)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HIS__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HIS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__HIS__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HISTIDPHOS__45__RXN" name="HISTIDPHOS-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__HISTIDINOL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HISTIDINOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HISTOLDEHYD__45__RXN" name="histidinol dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12595)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HISTIDINOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HISTIDINAL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HISTONE__45__ACETYLTRANSFERASE__45__RXN" name="histone acetyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24887) or (E_subulatus_03248) or (E_subulatus_20641) or (E_subulatus_11808) or (E_subulatus_24316) or (E_subulatus_08744) or (E_subulatus_02805) or (E_subulatus_08743) or (E_subulatus_25782) or (E_subulatus_07359) or (E_subulatus_25785) or (E_subulatus_24888) or (E_subulatus_25784) or (E_subulatus_13843) or (E_subulatus_02806) or (E_subulatus_19305) or (E_subulatus_11671) or (E_subulatus_11806) or (E_subulatus_25783) or (E_subulatus_06651) or (E_subulatus_24990) or (E_subulatus_07360) or (E_subulatus_19304) or (E_subulatus_21038) or (E_subulatus_11807) or (E_subulatus_02807) or (E_subulatus_01574) or (E_subulatus_14237) or (E_subulatus_18822)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Histone__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Histone__45__Acetyl__45__Lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HISTONE__45__LYSINE__45__N__45__METHYLTRANSFERASE__45__RXN" name="histone-lysine N-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04756) or (E_subulatus_16931) or (E_subulatus_09497) or (E_subulatus_13563) or (E_subulatus_04755) or (E_subulatus_01048) or (E_subulatus_17361) or (E_subulatus_01714) or (E_subulatus_12098) or (E_subulatus_07293) or (E_subulatus_08141) or (E_subulatus_07292) or (E_subulatus_01049) or (E_subulatus_06145) or (E_subulatus_06146) or (E_subulatus_22269) or (E_subulatus_24585) or (E_subulatus_13564) or (E_subulatus_16134) or (E_subulatus_16135) or (E_subulatus_12135) or (E_subulatus_02555) or (E_subulatus_00734) or (E_subulatus_12097) or (E_subulatus_22268) or (E_subulatus_08263) or (E_subulatus_09496) or (E_subulatus_07291) or (E_subulatus_25581) or (E_subulatus_12096) or (E_subulatus_06147) or (E_subulatus_22028) or (E_subulatus_20400) or (E_subulatus_24271) or (E_subulatus_22270) or (E_subulatus_01051) or (E_subulatus_13085) or (E_subulatus_15275) or (E_subulatus_13380) or (E_subulatus_01713) or (E_subulatus_06144) or (E_subulatus_06148) or (E_subulatus_01050) or (E_subulatus_02181) or (E_subulatus_24523) or (E_subulatus_06149) or (E_subulatus_01715) or (E_subulatus_24586) or (E_subulatus_20563) or (E_subulatus_25580)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Histone__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8579_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HISTPRATPHYD__45__RXN" name="phosphoribosyl-ATP diphosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24036) or (E_subulatus_24035) or (E_subulatus_24037)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHORIBOSYL__45__ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHORIBOSYL__45__AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOLO__45__ACP__45__SYNTH__45__RXN" name="holo-[acyl-carrier-protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01014) or (E_subulatus_12579) or (E_subulatus_01013) or (E_subulatus_17853) or (E_subulatus_12578) or (E_subulatus_12580) or (E_subulatus_12581) or (E_subulatus_12582)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6012 , PWY-6012-1</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_All__45__apo__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_All__45__holo__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOLOCYTOCHROME__45__C__45__SYNTHASE__45__RXN" name="holocytochrome-c synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00554) or (E_subulatus_24001)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cytochromes__45__c_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HEME_C_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Apocytochromes__45__c_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMOACONITATE__45__HYDRATASE__45__RXN" name="HOMOACONITATE-HYDRATASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft399_5a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-3081 , P241-PWY , LYSINE-AMINOAD-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HOMO__45__CIS__45__ACONITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HOMO__45__I__45__CIT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMOCYSMET__45__RXN" name="5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19864)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HSERMETANA-PWY , PWY-6151 , HOMOSER-METSYN-PWY , PWY-5041 , PWY-702</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1302_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__1301_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMOCYSMETB12__45__RXN" name="methionine synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03439) or (E_subulatus_08517)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: 1CMET2-PWY , PWY-7977 , HSERMETANA-PWY , PWY-3841 , HOMOSER-METSYN-PWY , ADENOSYLHOMOCYSCAT-PWY , PWY-2201</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__METHYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMOCYSMETB12__45__RXN__45__HOMO__45__CYS__47__5__45__METHYL__45__THF__47____47__MET__47__THF__46__31__46__" name="HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31." reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__METHYL__45__THF_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THF_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMOCYSTEINE__45__S__45__METHYLTRANSFERASE__45__RXN" name="S-adenosylmethionine-homocysteine S-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03439) or (E_subulatus_08517) or (E_subulatus_16080)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMOGENTISATE__45__12__45__DIOXYGENASE__45__RXN" name="homogentisate oxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02611)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TYRFUMCAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HOMOGENTISATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_4__45__MALEYL__45__ACETOACETATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMOSERDEAM__45__RXN" name="HOMOSERDEAM-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_22565) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HOMO__45__SER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__OXOBUTANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMOSERDEHYDROG__45__RXN" name="homoserine dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24093) or (E_subulatus_18837) or (E_subulatus_24092) or (E_subulatus_25025) or (E_subulatus_24091)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: HOMOSERSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ASPARTATE__45__SEMIALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HOMO__45__SER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMOSERKIN__45__RXN" name="homoserine kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24324)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HOMOSER-THRESYN-PWY , PWY-702</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HOMO__45__SER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_O__45__PHOSPHO__45__L__45__HOMOSERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HOMSUCTRAN__45__RXN" name="HOMSUCTRAN-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: HOMOSER-METSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HOMO__45__SER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_O__45__SUCCINYL__45__L__45__HOMOSERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HYDROXYMETHYLGLUTARYL__45__COA__45__LYASE__45__RXN" name="hydroxymethylglutaryl-CoA lyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22330)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5074 , LEU-DEG2-PWY , PWY66-367</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__HYDROXY__45__3__45__METHYL__45__GLUTARYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__KETOBUTYRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_HYDROXYMETHYLGLUTARYL__45__COA__45__SYNTHASE__45__RXN" name="hydroxymethyl glutaryl-CoA synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02860) or (E_subulatus_05504) or (E_subulatus_05505) or (E_subulatus_06769) or (E_subulatus_02861)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7391 , PWY-7524 , PWY-7571 , PWY-6174 , PWY66-367 , PWY-922</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETOACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__HYDROXY__45__3__45__METHYL__45__GLUTARYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_IGPSYN__45__RXN" name="indole-3-glycerol-phosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18124) or (E_subulatus_18125) or (E_subulatus_21178) or (E_subulatus_22810) or (E_subulatus_22809)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: TRPSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBOXYPHENYLAMINO__45__DEOXYRIBULOSE__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_INDOLE__45__3__45__GLYCEROL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_IMIDPHOSDEHYD__45__RXN" name="imidazoleglycerol-phosphate dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24102)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__ERYTHRO__45__IMIDAZOLE__45__GLYCEROL__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_IMIDAZOLE__45__ACETOL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_IMP__45__DEHYDROG__45__RXN" name="inosine 5&apos;-monophosphate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13042) or (E_subulatus_03908) or (E_subulatus_13041)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6596 , PWY-5695 , PWY-7221</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_IMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_XANTHOSINE__45__5__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_IMPCYCLOHYDROLASE__45__RXN" name="IMP cyclohydrolase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23472)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6123 , PWY-7234 , PWY-6124</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_IMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHORIBOSYL__45__FORMAMIDO__45__CARBOXAMIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_INDANOL__45__DEHYDROGENASE__45__RXN" name="Aldo-keto reductase family 1 member C1" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16044) or (E_subulatus_16048) or (E_subulatus_16049) or (E_subulatus_16047) or (E_subulatus_16045) or (E_subulatus_16046)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__INDANOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__INDANONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_INOPHOSPHOR__45__RXN" name="INOPHOSPHOR-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6609 , SALVADEHYPOX-PWY , PWY0-1296</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INOSINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RIBOSE__45__1P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYPOXANTHINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_INORGPYROPHOSPHAT__45__RXN" name="inorganic pyrophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18785) or (E_subulatus_05650) or (E_subulatus_22148) or (E_subulatus_14166) or (E_subulatus_18787) or (E_subulatus_18784) or (E_subulatus_16971) or (E_subulatus_18407) or (E_subulatus_24983) or (E_subulatus_05651) or (E_subulatus_12902) or (E_subulatus_05656) or (E_subulatus_05654) or (E_subulatus_22149) or (E_subulatus_12185) or (E_subulatus_14167) or (E_subulatus_20386) or (E_subulatus_22147) or (E_subulatus_05652) or (E_subulatus_18786) or (E_subulatus_05657) or (E_subulatus_12903) or (E_subulatus_05655) or (E_subulatus_05653) or (E_subulatus_20385)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7807 , PWY-7805</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_IPPISOM__45__RXN" name="isopentenyl-diphosphate delta-isomerase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00110) or (E_subulatus_00109)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7391 , PWY-5123 , PWY-7560 , PWY-7524 , PWY-6859 , PWY-6383 , PWY-7102 , PWY-6174 , PWY-922 , NONMEVIPP-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DELTA3__45__ISOPENTENYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4211_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ISOCIT__45__CLEAV__45__RXN" name="isocitrate lyase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22267) or (E_subulatus_18977)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P105-PWY , PWY-6969 , GLYOXYLATE-BYPASS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THREO__45__DS__45__ISO__45__CITRATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYOX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ISOCITDEH__45__RXN" name="isocitrate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13345)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P105-PWY , PWY-6969 , PWY-7124 , FERMENTATION-PWY , PWY-7268 , PWY-7254 , PWY-5913 , PWY-6728 , TCA , P23-PWY , REDCITCYC , PWY-6549</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THREO__45__DS__45__ISO__45__CITRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ISOLEUCINE__45____45__TRNA__45__LIGASE__45__RXN" name="isoleucine-tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22968) or (E_subulatus_22794)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ILE__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ILE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__ILE__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ISOVALERYLCOA__45__DHLIPOAMIDE__45__RXN" name="dihydrolipoyllysine-residue (3-methylbutanoyl)transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14800)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ISOVALERYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__3MB__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ISPH2__45__RXN" name="isopentenyl-diphosphate:NAD(P)+ oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11846)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7560 , NONMEVIPP-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HYDROXY__45__METHYL__45__BUTENYL__45__DIP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DELTA3__45__ISOPENTENYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_KETOACYLCOATHIOL__45__RXN" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-391 , FAO-PWY , PWY-7288 , PWY-5136</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__KETOACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Saturated__45__Fatty__45__Acyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_KETOBUTFORMLY__45__RXN" name="keto acid formate lyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24809)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5437</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__OXOBUTANOATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROPIONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_KETOISOCAPROATE__45__RXN" name="4-methyl-2-oxopentanoate dehydrogenase (lipoamide)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14800) or (E_subulatus_02028)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2K__45__4CH3__45__PENTANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__3MB__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_KETOLACTOSE__45__RXN" name="3-ketolactose hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18607) or (E_subulatus_14852) or (E_subulatus_00876) or (E_subulatus_07881) or (E_subulatus_00877) or (E_subulatus_14853)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: LACTOSEUTIL-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__KETOLACTOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1242_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_L__45__AMINO__45__ACID__45__OXIDASE__45__RXN" name="L-amino-acid oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17393) or (E_subulatus_17392)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Amino__45__Acids__45__20_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__Oxo__45__carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_L__45__ASPARTATE__45__OXID__45__RXN" name="L-ASPARTATE-OXID-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7342 , PYRIDNUCSYN-PWY , PWY-5316</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_IMINOASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_L__45__GLN__45__FRUCT__45__6__45__P__45__AMINOTRANS__45__RXN" name="glutamine-fructose-6-phosphate transaminase (isomerizing)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23178) or (E_subulatus_20684) or (E_subulatus_20685) or (E_subulatus_20686) or (E_subulatus_23177) or (E_subulatus_23176)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: UDPNAGSYN-PWY , PWY-6749 , PWY-8013 , UDPNACETYLGALSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__GLUCOSAMINE__45__6__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_L__45__IDITOL__45__2__45__DEHYDROGENASE__45__RXN" name="L-iditol dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13923) or (E_subulatus_13920) or (E_subulatus_13922) or (E_subulatus_13921)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__369_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15616_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_L__45__LACTATE__45__DEHYDROGENASE__45__CYTOCHROME__45__RXN" name="L-lactate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24177)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5458</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cytochromes__45__C__45__Oxidized_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_L__45__LACTATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Reduced_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_L__45__LYSINE__45__OXIDASE__45__RXN" name="L-LYSINE-OXIDASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5311</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LYS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETO__45__6__45__AMINO__45__CAPROATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_L__45__XYLULOSE__45__REDUCTASE__45__RXN" name="L-xylulose reductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02587) or (E_subulatus_20215)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5525 , PWY-5515</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_XYLITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__XYLULOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LACTALDDEHYDROG__45__RXN" name="LACTALDDEHYDROG-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY0-1317 , PWY-5197 , PWY-6713 , PWY-5458</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LACTALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__LACTATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LACTALDEHYDE__45__OXI__45__RXN" name="LACTALDEHYDE-OXI-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MGLDLCTANA-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__358_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__LACTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LCYSDESULF__45__RXN" name="L-cysteine desulfhydrase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_22565) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-426</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LEGHEMOGLOBIN__45__REDUCTASE__45__RXN" name="LEGHEMOGLOBIN-REDUCTASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04353) or (E_subulatus_04354)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10494_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10495_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LEUCINE__45____45__TRNA__45__LIGASE__45__RXN" name="leucine&amp;mdash;tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22795) or (E_subulatus_12272) or (E_subulatus_23408) or (E_subulatus_22796) or (E_subulatus_08472) or (E_subulatus_23409) or (E_subulatus_12273)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LEU_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LEU__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__LEU__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LEUKOTRIENE__45__A4__45__HYDROLASE__45__RXN" name="leukotriene A-4 hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14205)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-375</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8892_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_6Z8E10E14Z__45__5S12R__45__512__45__DIHYDROXYI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LINOLENOYL__45__RXN" name="acyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7724 , PWY-7049</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LINOLENIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_LINOLENOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LINOLEOYL__45__RXN" name="LINOLEOYL-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6917</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__18_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LINOLEIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LONG__45__CHAIN__45__ACYL__45__COA__45__DEHYDROGENASE__45__RXN" name="long-chain-acyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_21544) or (E_subulatus_23466) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Long__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Long__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LONG__45__CHAIN__45__ENOYL__45__COA__45__HYDRATASE__45__RXN" name="long-chain-enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Long__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Long__45__Chain__45__3S__45__Hydroxyacyl__45__CoAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LONG__45__CHAIN__45__FATTY__45__ACYL__45__COA__45__REDUCTASE__45__RXN" name="acyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12410) or (E_subulatus_25108) or (E_subulatus_12413) or (E_subulatus_12412) or (E_subulatus_12411) or (E_subulatus_17420) or (E_subulatus_23466) or (E_subulatus_21544) or (E_subulatus_11080) or (E_subulatus_12178) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Long__45__Chain__45__Acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Long__45__Chain__45__Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LTAA__45__RXN" name="L-allo-threonine aldolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15876) or (E_subulatus_15873) or (E_subulatus_23527) or (E_subulatus_15874) or (E_subulatus_15875) or (E_subulatus_23528)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ALLO__45__THREONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETALD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LYSINE__45____45__TRNA__45__LIGASE__45__RXN" name="lysine&amp;mdash;tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16816) or (E_subulatus_18715) or (E_subulatus_18713) or (E_subulatus_18714) or (E_subulatus_18716) or (E_subulatus_18712) or (E_subulatus_15900)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LYS__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__LYS__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LYSINE__45__N__45__ACETYLTRANSFERASE__45__RXN" name="LYSINE-N-ACETYLTRANSFERASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24887) or (E_subulatus_06651) or (E_subulatus_08186) or (E_subulatus_08187) or (E_subulatus_24888) or (E_subulatus_09989) or (E_subulatus_07724)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__567_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_LYSOPHOSPHOLIPASE__45__RXN" name="lysophospholipase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13048) or (E_subulatus_13047) or (E_subulatus_13046)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__Lysophosphatidylcholines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__GLYCERO__45__PHOSPHORYLCHOLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MALATE__45__DEH__45__RXN" name="malate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21352) or (E_subulatus_25574) or (E_subulatus_23248) or (E_subulatus_23246) or (E_subulatus_23247) or (E_subulatus_23250) or (E_subulatus_23249)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7383 , P108-PWY , P42-PWY , MALATE-ASPARTATE-SHUTTLE-PWY , PWY-5690 , PWY66-398 , PWY-7115 , PWY-5392 , PWY-5913 , PWY-561 , PWY-6969 , FERMENTATION-PWY , GLYOXYLATE-BYPASS , P23-PWY , P105-PWY , GLUCONEO-PWY , TCA , PWY-1622 , PWY66-399 , PWY-6728</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MALIC__45__NADP__45__RXN" name="malate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23248) or (E_subulatus_23246) or (E_subulatus_23247) or (E_subulatus_23250) or (E_subulatus_23249)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-241 , GLUCONEO-PWY , PWY-7117</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MAL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MALONYL__45__COA__45__ACP__45__TRANSACYL__45__RXN" name="[acyl-carrier-protein] S-malonyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_24809) or (E_subulatus_06112) or (E_subulatus_06111) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6799 , PWY-8012 , PWY-7388 , PWY-4381</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MALONYL__45__COA__45__DECARBOXYLASE__45__RXN" name="malonyl-CoA decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02885) or (E_subulatus_02884) or (E_subulatus_02886)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MALSYN__45__RXN" name="malate synthase A" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07731) or (E_subulatus_18977) or (E_subulatus_07730)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: P105-PWY , PWY-7295 , PWY-6969 , PWY-7854 , GLYOXDEG-PWY , PWY-7294 , GLYOXYLATE-BYPASS , PWY-7118</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYOX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MANNITOL__45__1__45__PHOSPHATASE__45__RXN" name="mannitol-1-phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17183)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3881 , PWY-6531</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MANNITOL__45__1P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MANNITOL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MANNITOL__45__2__45__DEHYDROGENASE__45__RXN" name="D-mannitol dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25738)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6531</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MANNITOL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15382_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MANNKIN__45__RXN" name="MANNKIN-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1656_9a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6140 , PWY-3861 , PWY-6992</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__mannopyranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15979_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MANNPDEHYDROG__45__RXN" name="mannitol-1-phosphate 5-dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23679) or (E_subulatus_06133) or (E_subulatus_00272) or (E_subulatus_06132) or (E_subulatus_17196) or (E_subulatus_17182) or (E_subulatus_06131)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: MANNIDEG-PWY , PWY-6531</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MANNITOL__45__1P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MANNPGUANYLTRANGDP__45__RXN" name="MANNPGUANYLTRANGDP-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08388)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MANNOSE__45__1P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MANNPISOM__45__RXN" name="mannose-6-phosphate isomerase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20089) or (E_subulatus_20087) or (E_subulatus_24832) or (E_subulatus_17116) or (E_subulatus_24833) or (E_subulatus_17115)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3881 , PWY-7456 , PWY-5659 , PWY-6992 , PWY-3861 , PWY-882 , PWY-7586 , MANNCAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15979_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MBCOA__45__DHLIPOAMIDE__45__RXN" name="dihydrolipoyllysine-residue (2-methylbutanoyl)transferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14800)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__METHYL__45__BUTYRYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__2MB__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MEPROPCOA__45__FAD__45__RXN" name="MEPROPCOA-FAD-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: VALDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ISOBUTYRYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FADH2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHACRYLYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MERCAPYSTRANS__45__RXN" name="3-mercaptopyruvate:cyanide sulfurtransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24020) or (E_subulatus_24021) or (E_subulatus_02631) or (E_subulatus_24019) or (E_subulatus_24022) or (E_subulatus_24025) or (E_subulatus_24023) or (E_subulatus_24024)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5329</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__MERCAPTO__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METBALT__45__RXN" name="METBALT-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22240)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_O__45__SUCCINYL__45__L__45__HOMOSERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__OXOBUTANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHENYLTHFCYCLOHYDRO__45__RXN" name="methenyltetrahydrofolate cyclohydrolase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18694) or (E_subulatus_18693)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: 1CMET2-PWY , CODH-PWY , PWY-3841 , PWY-5497 , PWY-5030 , P164-PWY , PWY-7909 , PWY-6613 , PWY-1722 , PWY-2201</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__10__45__METHENYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FORMYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHIONINE__45____45__TRNA__45__LIGASE__45__RXN" name="methionine-tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21925) or (E_subulatus_21928) or (E_subulatus_23075) or (E_subulatus_21926) or (E_subulatus_23077) or (E_subulatus_21927) or (E_subulatus_16674) or (E_subulatus_23078) or (E_subulatus_23079) or (E_subulatus_23076)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Elongation__45__tRNAMet_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__MET__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHIONYL__45__TRNA__45__FORMYLTRANSFERASE__45__RXN" name="methionyl-tRNA formyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02633) or (E_subulatus_02632)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__methionyl__45__tRNAfmet_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__formyl__45__L__45__methionyl__45__tRNAfmet_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHYLACETOACETYLCOATHIOL__45__RXN" name="3-oxoacyl CoA thiolase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23204) or (E_subulatus_15294) or (E_subulatus_15293)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5109 , ILEUDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__METHYL__45__ACETO__45__ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROPIONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHYLACYLYLCOA__45__HYDROXY__45__RXN" name="Methylacrylyl-CoA hydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13805) or (E_subulatus_02116) or (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_04057) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: VALDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12173_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHACRYLYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHYLCROTONYL__45__COA__45__CARBOXYLASE__45__RXN" name="3-methylcrotonyl-CoA carboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21382) or (E_subulatus_21383) or (E_subulatus_21385) or (E_subulatus_21386) or (E_subulatus_21387) or (E_subulatus_21384) or (E_subulatus_08408)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: LEU-DEG2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__METHYL__45__CROTONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_TRANS__45__3__45__METHYL__45__GLUTACONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHYLENETHFDEHYDROG__45__NADP__45__RXN" name="methylenetetrahydrofolate dehydrogenase (NADP+)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18694) or (E_subulatus_08635) or (E_subulatus_08637) or (E_subulatus_08636) or (E_subulatus_01721) or (E_subulatus_01722) or (E_subulatus_18693) or (E_subulatus_20899) or (E_subulatus_00189) or (E_subulatus_20898)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: 1CMET2-PWY , CODH-PWY , PWY-3841 , PWY-5497 , PWY-7909 , PWY-1722 , PWY-2201</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__10__45__METHENYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHYLGLUTACONYL__45__COA__45__HYDRATASE__45__RXN" name="methylglutaconyl-CoA hydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13806) or (E_subulatus_13807) or (E_subulatus_13805)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: LEU-DEG2-PWY , PWY-7571</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__HYDROXY__45__3__45__METHYL__45__GLUTARYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TRANS__45__3__45__METHYL__45__GLUTACONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHYLMALONYL__45__COA__45__EPIM__45__RXN" name="METHYLMALONYL-COA-EPIM-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: P108-PWY , PROPIONMET-PWY , PWY-7384 , PWY-5789 , PWY-5743 , PWY-6728</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYL__45__MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__METHYL__45__MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHYLMALONYL__45__COA__45__MUT__45__RXN" name="methylmalonyl-CoA mutase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15374)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7854 , PROPIONMET-PWY , P108-PWY , PWY-7384 , PWY0-43 , PWY-5789 , PWY-5743 , PWY-6728</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYL__45__MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SUC__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHYLTHIOADENOSINE__45__NUCLEOSIDASE__45__RXN" name="5&apos;-methylthioadenosine nucleosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00201) or (E_subulatus_00200)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6754 , PWY0-1391</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__METHYLTHIOADENOSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__560_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_METHYLVALERATE__45__RXN" name="3-methyl-2-oxobutanoate dehydrogenase [(S)-2-methylbutanoyl-transferring)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14800) or (E_subulatus_02028)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETO__45__3__45__METHYL__45__VALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__2MB__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MEVALONATE__45__KINASE__45__RXN" name="mevalonate kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13787)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7391 , PWY-922 , PWY-6174</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MEVALONATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__499_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MONOPHENOL__45__MONOOXYGENASE__45__RXN" name="tyrosinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04816) or (E_subulatus_07983) or (E_subulatus_00885) or (E_subulatus_03621) or (E_subulatus_20787) or (E_subulatus_10375) or (E_subulatus_04818) or (E_subulatus_08208) or (E_subulatus_10196) or (E_subulatus_10195) or (E_subulatus_18153) or (E_subulatus_11644) or (E_subulatus_00884) or (E_subulatus_07399) or (E_subulatus_09951) or (E_subulatus_15328) or (E_subulatus_13795) or (E_subulatus_09948) or (E_subulatus_02578) or (E_subulatus_08206) or (E_subulatus_15819) or (E_subulatus_03619) or (E_subulatus_16728) or (E_subulatus_09950) or (E_subulatus_02228) or (E_subulatus_13421) or (E_subulatus_07400) or (E_subulatus_13422) or (E_subulatus_15381) or (E_subulatus_03620) or (E_subulatus_17576) or (E_subulatus_18484) or (E_subulatus_09947) or (E_subulatus_04817) or (E_subulatus_08210) or (E_subulatus_15820) or (E_subulatus_02227) or (E_subulatus_00478) or (E_subulatus_08207) or (E_subulatus_02579) or (E_subulatus_07984) or (E_subulatus_18154) or (E_subulatus_08209) or (E_subulatus_23779) or (E_subulatus_17575) or (E_subulatus_09949) or (E_subulatus_15380) or (E_subulatus_18759) or (E_subulatus_10289)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7917 , PWY-6481</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TYR_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DOPAQUINONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MRNA__45__GUANYLYLTRANSFERASE__45__RXN" name="mRNA guanylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18352) or (E_subulatus_18354) or (E_subulatus_18351) or (E_subulatus_18353)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7375</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__8630_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_G5__45__pppR__45__mRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MYO__45__INOSITOL__45__1__45__PHOSPHATE__45__SYNTHASE__45__RXN" name="inositol-3-phosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21538) or (E_subulatus_05446)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6372 , PWY-2301 , PWY-4661 , PWY-6580 , PWY1G-0 , PWY-6664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__glucopyranose__45__6__45__phosphate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__L__45__MYO__45__INOSITOL__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MYO__45__INOSITOL__45__1OR__45__4__45__MONOPHOSPHATASE__45__RXN" name="inositol-1(or 4)-monophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22024) or (E_subulatus_14942) or (E_subulatus_18485) or (E_subulatus_19762) or (E_subulatus_22023) or (E_subulatus_01398) or (E_subulatus_01396) or (E_subulatus_22025) or (E_subulatus_01397) or (E_subulatus_14670) or (E_subulatus_22022) or (E_subulatus_04574)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2301</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__L__45__MYO__45__INOSITOL__45__1__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_MYO__45__INOSITOL__45__OXYGENASE__45__RXN" name="inositol oxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18920) or (E_subulatus_05362) or (E_subulatus_18919)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4841</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__Glucopyranuronate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_N__45__ACETYLGLUTPREDUCT__45__RXN" name="N-acetyl-gamma-glutamyl-phosphate reductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21322) or (E_subulatus_21324) or (E_subulatus_21321) or (E_subulatus_21320) or (E_subulatus_21323) or (E_subulatus_20194)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLUTORN-PWY , PWY-5154 , ARGSYNBSUB-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__469_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__GLUTAMYL__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_N__45__ACETYLTRANSFER__45__RXN" name="acetyl-CoA:L-glutamate N-acetyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15123)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLUTORN-PWY , PWY-5154 , ARGSYNBSUB-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__GLU_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_N__45__CARBAMOYLPUTRESCINE__45__AMIDASE__45__RXN" name="N-carbamoylputrescine amidohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05075)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-43 , ARGDEG-III-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__597_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PUTRESCINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NAD__43____45__ADP__45__RIBOSYLTRANSFERASE__45__RXN" name="NAD+ ADP-ribosyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20599) or (E_subulatus_14910) or (E_subulatus_00378) or (E_subulatus_21901) or (E_subulatus_01837) or (E_subulatus_19417) or (E_subulatus_14403) or (E_subulatus_19578) or (E_subulatus_05322) or (E_subulatus_19418) or (E_subulatus_07277) or (E_subulatus_06603) or (E_subulatus_03541) or (E_subulatus_23531) or (E_subulatus_06246) or (E_subulatus_10374) or (E_subulatus_01267) or (E_subulatus_10018) or (E_subulatus_10373) or (E_subulatus_21915) or (E_subulatus_19904) or (E_subulatus_02763) or (E_subulatus_05235) or (E_subulatus_17515) or (E_subulatus_05325) or (E_subulatus_01262) or (E_subulatus_07280) or (E_subulatus_06602) or (E_subulatus_14765) or (E_subulatus_00097) or (E_subulatus_00098) or (E_subulatus_07935) or (E_subulatus_17822) or (E_subulatus_05324) or (E_subulatus_00099) or (E_subulatus_11194) or (E_subulatus_17518) or (E_subulatus_01135) or (E_subulatus_14909) or (E_subulatus_05323) or (E_subulatus_14402) or (E_subulatus_11195) or (E_subulatus_23532) or (E_subulatus_05326) or (E_subulatus_06601) or (E_subulatus_07278) or (E_subulatus_06078) or (E_subulatus_05318) or (E_subulatus_05319) or (E_subulatus_20598) or (E_subulatus_07283) or (E_subulatus_00100) or (E_subulatus_07282) or (E_subulatus_19398) or (E_subulatus_21902) or (E_subulatus_18210) or (E_subulatus_06604) or (E_subulatus_02447) or (E_subulatus_17517) or (E_subulatus_05320) or (E_subulatus_05321) or (E_subulatus_05236) or (E_subulatus_14404) or (E_subulatus_07281) or (E_subulatus_03538) or (E_subulatus_21914) or (E_subulatus_17800) or (E_subulatus_06719) or (E_subulatus_17516) or (E_subulatus_02528) or (E_subulatus_21913) or (E_subulatus_24393) or (E_subulatus_07279) or (E_subulatus_21900) or (E_subulatus_18209) or (E_subulatus_03542) or (E_subulatus_02448)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADP__45__D__45__Ribosyl__45__Acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NIACINAMIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP__45__D__45__Ribosyl__45__Acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NAD__45__KIN__45__RXN" name="NAD+ kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10947) or (E_subulatus_12048) or (E_subulatus_24150) or (E_subulatus_21941) or (E_subulatus_12047) or (E_subulatus_24151) or (E_subulatus_10951) or (E_subulatus_10949) or (E_subulatus_10948) or (E_subulatus_24152) or (E_subulatus_23696) or (E_subulatus_01686) or (E_subulatus_10950)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: NADPHOS-DEPHOS-PWY , NADPHOS-DEPHOS-PWY-1 , PWY-5083 , PWY-7269 , PWY-7268</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NAD__45__SYNTH__45__GLN__45__RXN" name="NAD+ synthetase, glutamine dependent" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02877) or (E_subulatus_02876) or (E_subulatus_02875) or (E_subulatus_02874)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY3O-4107 , PYRIDNUCSYN-PWY , PWY-7761 , PWY-5381 , PWY-5653 , PYRIDNUCSAL-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DEAMIDO__45__NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NAD__45__SYNTH__45__NH3__45__RXN" name="NAD+ synthetase, NH3-dependent" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02874) or (E_subulatus_02875)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PYRIDNUCSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DEAMIDO__45__NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NADH__45__DEHYDROG__45__A__45__RXN" name="NADH dehydrogenase (ubiquinone)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04901) or (E_subulatus_24041) or (E_subulatus_03077) or (E_subulatus_03082) or (E_subulatus_24043) or (E_subulatus_20230) or (E_subulatus_22862) or (E_subulatus_03083) or (E_subulatus_04899) or (E_subulatus_19174) or (E_subulatus_09984) or (E_subulatus_04902) or (E_subulatus_22859) or (E_subulatus_03079) or (E_subulatus_09985) or (E_subulatus_22858) or (E_subulatus_22860) or (E_subulatus_17880) or (E_subulatus_01687) or (E_subulatus_13132) or (E_subulatus_17879) or (E_subulatus_04900) or (E_subulatus_24042) or (E_subulatus_11126) or (E_subulatus_03078) or (E_subulatus_22864) or (E_subulatus_04904) or (E_subulatus_11127) or (E_subulatus_04903) or (E_subulatus_22861) or (E_subulatus_22863) or (E_subulatus_22857) or (E_subulatus_17878) or (E_subulatus_21002) or (E_subulatus_24044)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1334 , PWY-5083 , PWY0-1335 , PWY-6692 , PWY-3781 , PWY-4302</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="5" constant="false"/>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_e" stoichiometry="4" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NADH__45__DEHYDROGENASE__45__RXN" name="NADH-DEHYDROGENASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04901) or (E_subulatus_24041) or (E_subulatus_24043) or (E_subulatus_00263) or (E_subulatus_04794) or (E_subulatus_04899) or (E_subulatus_08615) or (E_subulatus_04902) or (E_subulatus_00264) or (E_subulatus_13132) or (E_subulatus_04900) or (E_subulatus_24042) or (E_subulatus_11126) or (E_subulatus_04904) or (E_subulatus_11127) or (E_subulatus_04903) or (E_subulatus_04793) or (E_subulatus_04795) or (E_subulatus_24044)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NADH__45__KINASE__45__RXN" name="NADH kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12048) or (E_subulatus_12047) or (E_subulatus_23696) or (E_subulatus_01686)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7269 , PWY-7268 , PWY-5083</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NADPH__45____45__FERRIHEMOPROTEIN__45__REDUCTASE__45__RXN" name="NADPH--cytochrome P450 reductase 2" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05990) or (E_subulatus_03642) or (E_subulatus_16914) or (E_subulatus_03641) or (E_subulatus_10031)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Oxidized__45__hemoproteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Reduced__45__hemoproteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NADPH__45__DEHYDROGENASE__45__FLAVIN__45__RXN" name="flavin reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22949) or (E_subulatus_03230) or (E_subulatus_21943)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_RIBOFLAVIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__316_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NADPH__45__DEHYDROGENASE__45__RXN" name="NADPH-DEHYDROGENASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02690) or (E_subulatus_04793) or (E_subulatus_04795) or (E_subulatus_04794)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NADPYROPHOSPHAT__45__RXN" name="NAD pyrophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16985)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PYRIDNUCSAL-PWY , NAD-BIOSYNTHESIS-II , PWY-5381 , PWY-7761</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NICOTINAMIDE_NUCLEOTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NAG1P__45__URIDYLTRANS__45__RXN" name="NAG1P-URIDYLTRANS-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05405) or (EsuBft1578_6a)</p>
            <p>CATEGORIES: ORTHOLOGY and MANUAL</p>
            <p>SUBSYSTEM: UDPNAGSYN-PWY , PWY0-1261 , PWY-5514 , UDPNACETYLGALSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__1__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NAPHTHOATE__45__SYN__45__RXN" name="1,4-dihydroxy-2-naphthoyl-CoA synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05633)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5837</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__6972_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9925_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NARINGENIN__45__3__45__DIOXYGENASE__45__RXN" name="NARINGENIN-3-DIOXYGENASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY1F-FLAVSYN , PWY-6787</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NARINGENIN__45__CMPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIHYDROKAEMPFEROL__45__CMPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NARINGENIN__45__CHALCONE__45__SYNTHASE__45__RXN" name="NARINGENIN-CHALCONE-SYNTHASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09952) or (E_subulatus_24492) or (E_subulatus_23341)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6787 , PWY-5135 , PWY-6316 , PWY1F-FLAVSYN , PWY-7897 , PWY-7397</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_P__45__COUMAROYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="3" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__20012_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="4" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NICONUCADENYLYLTRAN__45__RXN" name="nicotinate-mononucleotide adenylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21810)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY3O-4107 , PYRIDNUCSYN-PWY , PWY-7761 , PWY-5381 , PWY-5653 , PYRIDNUCSAL-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NICOTINATE_NUCLEOTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DEAMIDO__45__NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NICOTINATEPRIBOSYLTRANS__45__RXN" name="nicotinate phosphoribosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10473) or (E_subulatus_22807)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY3O-4107 , PYRIDNUCSAL-PWY , PWY-5381</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NIACINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRPP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NICOTINATE_NUCLEOTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NITRATE__45__REDUCTASE__45__NADH__45__RXN" name="nitrate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24178) or (E_subulatus_24177) or (E_subulatus_04764)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-381</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NITRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NITRITE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NITRATE__45__REDUCTASE__45__NADPH__45__RXN" name="nitrate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24177)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5675</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NITRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NITRITE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NITRATE__45__REDUCTASE__45__NADPORNOPH__45__RXN" name="nitrate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24177)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NITRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NITRITE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NUCLEOSIDE__45__DIP__45__KIN__45__RXN" name="nucleoside diphosphate kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_19893) or (E_subulatus_03631) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_03750) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_23205) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Nucleoside__45__Diphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Nucleoside__45__Triphosphates_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NUCLEOSIDE__45__DIPHOSPHATASE__45__RXN" name="nucleoside diphosphate phosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19487) or (E_subulatus_19875) or (E_subulatus_03479) or (E_subulatus_11023) or (E_subulatus_03480) or (E_subulatus_19872) or (E_subulatus_19873) or (E_subulatus_06847) or (E_subulatus_19874)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Nucleoside__45__Diphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Nucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NUCLEOSIDE__45__PHOSPHATE__45__KINASE__45__RXN" name="NUCLEOSIDE-PHOSPHATE-KINASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14023) or (E_subulatus_14022)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Nucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Nucleoside__45__Diphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NUCLEOSIDE__45__TRIPHOSPHATASE__45__RXN" name="nucleoside triphosphate phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07754) or (E_subulatus_06476) or (E_subulatus_01794) or (E_subulatus_14955) or (E_subulatus_22833) or (E_subulatus_20419) or (E_subulatus_14248) or (E_subulatus_01714) or (E_subulatus_12646) or (E_subulatus_13555) or (E_subulatus_14957) or (E_subulatus_14533) or (E_subulatus_19429) or (E_subulatus_12649) or (E_subulatus_24658) or (E_subulatus_13554) or (E_subulatus_21364) or (E_subulatus_11663) or (E_subulatus_13969) or (E_subulatus_12213) or (E_subulatus_12211) or (E_subulatus_12748) or (E_subulatus_13188) or (E_subulatus_19691) or (E_subulatus_01713) or (E_subulatus_21475) or (E_subulatus_10392) or (E_subulatus_14956) or (E_subulatus_05373) or (E_subulatus_12647) or (E_subulatus_07733) or (E_subulatus_20416) or (E_subulatus_19730) or (E_subulatus_13487) or (E_subulatus_22834) or (E_subulatus_19428) or (E_subulatus_00278) or (E_subulatus_14154) or (E_subulatus_24659) or (E_subulatus_07752) or (E_subulatus_21360) or (E_subulatus_15589) or (E_subulatus_21359) or (E_subulatus_06184) or (E_subulatus_00231) or (E_subulatus_13968) or (E_subulatus_12209) or (E_subulatus_12749) or (E_subulatus_07262) or (E_subulatus_22538) or (E_subulatus_03327) or (E_subulatus_09220) or (E_subulatus_08550) or (E_subulatus_00805) or (E_subulatus_10006) or (E_subulatus_02379) or (E_subulatus_03328) or (E_subulatus_23400) or (E_subulatus_20418) or (E_subulatus_24662) or (E_subulatus_21474) or (E_subulatus_19692) or (E_subulatus_21550) or (E_subulatus_24661) or (E_subulatus_12214) or (E_subulatus_24656) or (E_subulatus_20417) or (E_subulatus_14330) or (E_subulatus_00228) or (E_subulatus_07732) or (E_subulatus_12210) or (E_subulatus_11850) or (E_subulatus_20791) or (E_subulatus_09223) or (E_subulatus_07028) or (E_subulatus_00279) or (E_subulatus_21743) or (E_subulatus_00229) or (E_subulatus_24660) or (E_subulatus_12141) or (E_subulatus_01252) or (E_subulatus_12645) or (E_subulatus_12212) or (E_subulatus_22300) or (E_subulatus_20415) or (E_subulatus_15855) or (E_subulatus_02378) or (E_subulatus_00706) or (E_subulatus_05372) or (E_subulatus_17245) or (E_subulatus_05487) or (E_subulatus_19729) or (E_subulatus_23399) or (E_subulatus_24986) or (E_subulatus_21549) or (E_subulatus_01715) or (E_subulatus_15021) or (E_subulatus_19613) or (E_subulatus_01136) or (E_subulatus_21362) or (E_subulatus_17264) or (E_subulatus_06904) or (E_subulatus_06183) or (E_subulatus_05486) or (E_subulatus_21564) or (E_subulatus_16684) or (E_subulatus_00232) or (E_subulatus_09224) or (E_subulatus_09222) or (E_subulatus_24655) or (E_subulatus_07027) or (E_subulatus_00806) or (E_subulatus_16983) or (E_subulatus_24657) or (E_subulatus_21363) or (E_subulatus_12648) or (E_subulatus_07753) or (E_subulatus_21581) or (E_subulatus_16063) or (E_subulatus_00230) or (E_subulatus_12208) or (E_subulatus_21361) or (E_subulatus_05916) or (E_subulatus_20963) or (E_subulatus_06905) or (E_subulatus_09221) or (E_subulatus_17265)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Nucleoside__45__Triphosphates_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Nucleoside__45__Diphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NUCLEOTIDASE__45__RXN" name="NUCLEOTIDASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22024) or (E_subulatus_22022) or (E_subulatus_22023) or (E_subulatus_22025)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Nucleotides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Nucleosides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_NUCLEOTIDE__45__PYROPHOSPHATASE__45__RXN" name="nucleoside triphosphate pyrophosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_16985) or (E_subulatus_16057) or (E_subulatus_02580) or (E_subulatus_01318) or (E_subulatus_16056)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Nucleoside__45__Triphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Nucleoside__45__Monophosphates_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_O__45__SUCCHOMOSERLYASE__45__RXN" name="O-SUCCHOMOSERLYASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22240)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: HOMOSER-METSYN-PWY , PWY-801 , PWY-I9</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_O__45__SUCCINYL__45__L__45__HOMOSERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__CYSTATHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_OHACYL__45__COA__45__DEHYDROG__45__RXN" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-391 , FAO-PWY , PWY-7007 , PWY-5136</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__3__45__HYDROXYACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__KETOACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_OHMETHYLBILANESYN__45__RXN" name="hydroxymethylbilane synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07065) or (E_subulatus_07066)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5188 , PWY-5189</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PORPHOBILINOGEN_c" stoichiometry="4" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="4" constant="false"/>
          <speciesReference species="M_HYDROXYMETHYLBILANE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_OMEGA__45__AMIDASE__45__RXN" name="OMEGA-AMIDASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21609)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DICARBOXYLIC__45__ACID__45__MONOAMIDES_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_dicarboxylate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ORNCARBAMTRANSFER__45__RXN" name="ORNCARBAMTRANSFER-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: ARGSYNBSUB-PWY , CITRULLINE-DEG-PWY , ARGSYN-PWY , PWY-7400 , CITRULBIO-PWY , PWY-4984 , PWY-4981</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ORNITHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBAMOYL__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__CITRULLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ORNDECARBOX__45__RXN" name="ornithine decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12389) or (E_subulatus_12392) or (E_subulatus_07648) or (E_subulatus_05377) or (E_subulatus_12391) or (E_subulatus_23646) or (E_subulatus_12390)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6305 , ORNDEG-PWY , PWY-46</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ORNITHINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PUTRESCINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ORNITHINE__45____45__OXO__45__ACID__45__AMINOTRANSFERASE__45__RXN" name="ornithine aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20725)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ORNITHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__Oxo__45__carboxylates_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Amino__45__Acids__45__20_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__GLUTAMATE_GAMMA__45__SEMIALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_ORNITHINE__45__GLU__45__AMINOTRANSFERASE__45__RXN" name="Ornithine--oxo-glutarate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20725)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ARGASEDEG-PWY , ARG-PRO-PWY , PWY-6344 , PWY-6922 , CITRULBIO-PWY , PWY-3341 , ARGININE-SYN4-PWY , PWY-4981</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ORNITHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__GLUTAMATE_GAMMA__45__SEMIALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_OROPRIBTRANS__45__RXN" name="orotate phosphoribosyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20068) or (E_subulatus_20073) or (E_subulatus_20071) or (E_subulatus_20074) or (E_subulatus_20072) or (E_subulatus_20075) or (E_subulatus_20067) or (E_subulatus_20070) or (E_subulatus_20069)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7791 , PWY-5686 , PWY-7790</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OROTIDINE__45__5__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PRPP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OROTATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_OROTPDECARB__45__RXN" name="OROTPDECARB-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20067) or (EsuBft572_7a)</p>
            <p>CATEGORIES: ORTHOLOGY and MANUAL</p>
            <p>SUBSYSTEM: PWY-7791 , PWY-5686 , PWY-7790</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OROTIDINE__45__5__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_OXALATE__45__OXIDASE__45__RXN" name="oxalate oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01075) or (E_subulatus_07774) or (E_subulatus_07773) or (E_subulatus_19816)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6697</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXALATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_OXALOACETATE__45__TAUTOMERASE__45__RXN" name="oxaloacetate keto-enol-isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14958) or (E_subulatus_14960) or (E_subulatus_14959)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ENOL__45__OXALOACETATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_OXALODECARB__45__RXN" name="oxaloacetate decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23248) or (E_subulatus_23246) or (E_subulatus_23247) or (E_subulatus_23250) or (E_subulatus_23249)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6339 , P184-PWY , METHYLGALLATE-DEGRADATION-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_P__45__PANTOCYSDECARB__45__RXN" name="4&apos;-phosphopantothenoylcysteine decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21040)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7851 , COA-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_R__45__4__45__PHOSPHOPANTOTHENOYL__45__L__45__CYSTEINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PANTETHEINE__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PABASYN__45__RXN" name="PABASYN-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18596)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6543</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHORISMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_4__45__AMINO__45__4__45__DEOXYCHORISMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PALMITOTRANS__45__RXN" name="palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24809)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: KDO-NAGLIPASYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Palmitoleoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_KDO2__45__LIPID__45__IVA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_KDO2__45__PALMITOLEOYL__45__LIPID__45__IVA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PALMITOYL__45__COA__45__HYDROLASE__45__RXN" name="PALMITOYL-COA-HYDROLASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6733 , PWY-5994 , PWY-321 , PWY-1121</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PALMITYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PALMITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PANTEPADENYLYLTRAN__45__RXN" name="pantetheine-phosphate adenylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19043) or (E_subulatus_19044) or (E_subulatus_05560) or (E_subulatus_05559) or (E_subulatus_05558)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7851 , COA-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PANTETHEINE__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DEPHOSPHO__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PANTOATE__45__BETA__45__ALANINE__45__LIG__45__RXN" name="pantoate-beta-alanine ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04858) or (E_subulatus_04859) or (E_subulatus_04860)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PANTO-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_B__45__ALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__PANTOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PANTOTHENATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PANTOTHENATE__45__KIN__45__RXN" name="pantothenate kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24329) or (E_subulatus_24333) or (E_subulatus_08359) or (E_subulatus_24331) or (E_subulatus_24330) or (E_subulatus_24332)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3961 , PANTO-PWY , COA-PWY-1</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PANTOTHENATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_4__45__P__45__PANTOTHENATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PDXJ__45__RXN" name="pyridoxine 5&apos;-phosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18064)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PYRIDOXSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DEOXYXYLULOSE__45__5P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__AMINO__45__PROPAN__45__2__45__ONE__45__3__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRIDOXINE__45__5P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PEPCARBOX__45__RXN" name="phosphoenolpyruvate carboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24628)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYQT-4429 , FERMENTATION-PWY , PWY-6146 , PWY-1622 , PWY-7115 , PWY-241 , PWY-6142 , PWY-7117 , PWY-5913 , PWY-7124 , P23-PWY , PWY-6549</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PEPCARBOXYKIN__45__RXN" name="phosphoenolpyruvate carboxykinase (ATP)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03444) or (E_subulatus_03443)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-561 , GLUCONEO-PWY , PWY-7117</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PEPDEPHOS__45__RXN" name="pyruvate kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05006) or (E_subulatus_22306) or (E_subulatus_07963) or (E_subulatus_05005)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7383 , PWY-5723 , P124-PWY , PWY-1042 , FERMENTATION-PWY , P122-PWY , ANAGLYCOLYSIS-PWY , PWY-5484 , GLYCOLYSIS , NPGLUCAT-PWY , P341-PWY , PWY-6901 , PWY-2221 , PWY-7003 , PWY-7218 , PWY-6142 , PWY-6886 , PWY-8004</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PEPSYNTH__45__RXN" name="PEPSYNTH-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5484 , P23-PWY , GLUCONEO-PWY , GLYCOLYSIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PEPTIDE__45__ALPHA__45__N__45__ACETYLTRANSFERASE__45__RXN" name="PEPTIDE-ALPHA-N-ACETYLTRANSFERASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft605_7a) or (EsuBft4059_3a) or (EsuBft1386_2a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__terminal__45__Amino__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__Alpha__45__Acetylated__45__N__45__terminal__45__Amino__45__Acid_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PEPTIDE__45__ASPARTATE__45__BETA__45__DIOXYGENASE__45__RXN" name="PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24508)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__L__45__Aspartates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Peptide__45__3__45__hydroxy__45__L__45__Aspartates_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PEPTIDYLPROLYL__45__ISOMERASE__45__RXN" name="peptidyl-prolyl cis-trans isomerase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10545) or (E_subulatus_06856) or (E_subulatus_23173) or (E_subulatus_25668) or (E_subulatus_15798) or (E_subulatus_15239) or (E_subulatus_15797) or (E_subulatus_03413) or (E_subulatus_02208) or (E_subulatus_25130) or (E_subulatus_10544) or (E_subulatus_17704) or (E_subulatus_17532) or (E_subulatus_21896) or (E_subulatus_17705) or (E_subulatus_07132) or (E_subulatus_07546) or (E_subulatus_16697) or (E_subulatus_08901) or (E_subulatus_13868) or (E_subulatus_17469) or (E_subulatus_09997) or (E_subulatus_02034) or (E_subulatus_13170) or (E_subulatus_12250) or (E_subulatus_16696) or (E_subulatus_20372) or (E_subulatus_07547) or (E_subulatus_17468) or (E_subulatus_09695) or (E_subulatus_13865) or (E_subulatus_23575) or (E_subulatus_02207) or (E_subulatus_10543) or (E_subulatus_02020) or (E_subulatus_15784) or (E_subulatus_09996) or (E_subulatus_22974) or (E_subulatus_17466) or (E_subulatus_02021) or (E_subulatus_17706) or (E_subulatus_02035) or (E_subulatus_08902) or (E_subulatus_08880) or (E_subulatus_17470) or (E_subulatus_07131) or (E_subulatus_17467) or (E_subulatus_13866) or (E_subulatus_03525) or (E_subulatus_16695) or (E_subulatus_13867) or (E_subulatus_18377) or (E_subulatus_08603)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8624_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8625_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PEROXID__45__RXN" name="alkaline peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02016) or (E_subulatus_01446) or (E_subulatus_16649) or (E_subulatus_25320) or (E_subulatus_08105) or (E_subulatus_00420) or (E_subulatus_08107) or (E_subulatus_16650) or (E_subulatus_20015) or (E_subulatus_18334) or (E_subulatus_21986) or (E_subulatus_13034) or (E_subulatus_10790) or (E_subulatus_08798) or (E_subulatus_04125) or (E_subulatus_08800) or (E_subulatus_05686) or (E_subulatus_04126) or (E_subulatus_05281) or (E_subulatus_08456) or (E_subulatus_22471) or (E_subulatus_08513) or (E_subulatus_20011) or (E_subulatus_21987) or (E_subulatus_10127) or (E_subulatus_20014) or (E_subulatus_08106) or (E_subulatus_13035) or (E_subulatus_05687) or (E_subulatus_23617) or (E_subulatus_17484) or (E_subulatus_20013) or (E_subulatus_08455) or (E_subulatus_07826) or (E_subulatus_15057) or (E_subulatus_20012) or (E_subulatus_21225) or (E_subulatus_01447) or (E_subulatus_03379) or (E_subulatus_08799) or (E_subulatus_23616) or (E_subulatus_02015) or (E_subulatus_04124) or (E_subulatus_13544) or (E_subulatus_13036) or (E_subulatus_25319) or (E_subulatus_11753) or (E_subulatus_00421) or (E_subulatus_02233) or (E_subulatus_13545) or (E_subulatus_05280)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Phenolic__45__Donors_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Phenoxyl__45__rad__45__of__45__phenolic__45__donors_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PGLUCISOM__45__RXN" name="glucose-6-phosphate isomerase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25494) or (E_subulatus_25493) or (E_subulatus_25497) or (E_subulatus_25496) or (E_subulatus_10015) or (E_subulatus_10868) or (E_subulatus_21917) or (E_subulatus_25495)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P122-PWY , PWY-5384 , PWY-6992 , SUCSYN-PWY , UDPNAGSYN-PWY , PWY-6142 , PWY-622 , PWY-5514 , PWY-6981 , PWY-5054 , RUMP-PWY , P124-PWY , PWY-621 , PWY-5659 , UDPNACETYLGALSYN-PWY , GLYCOLYSIS , PWY-7347 , GLUCONEO-PWY , PWY-7385 , PWY-8013 , PWY-3801 , ANAGLYCOLYSIS-PWY , P341-PWY , PWY-7238 , PWY66-399</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__glucopyranose__45__6__45__phosphate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PGLYCDEHYDROG__45__RXN" name="D-3-phosphoglycerate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01138) or (E_subulatus_19983) or (E_subulatus_19982)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-8010 , SERSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_G3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__P__45__HYDROXYPYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PGPPHOSPHA__45__RXN" name="phosphatidylglycerophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10800)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1545 , PWY4FS-8 , PWY-5269 , PWY-7817 , PWY-5668 , PWY4FS-7</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__1__45__PHOSPHATIDYL__45__GLYCEROL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__1__45__PHOSPHATIDYL__45__GLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHEAMINOTRANS__45__RXN" name="PHEAMINOTRANS-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1211_3a) or (EsuBft450_4a) or (EsuBft40_18a) or (EsuBft591_8a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: ANAPHENOXI-PWY , PWY-7432 , PWY-5079 , PHESYN</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHENYL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHENDEHYD__45__RXN" name="PHENDEHYD-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6941 , PWY-6534 , ANAPHENOXI-PWY , 2PHENDEG-PWY , PWY-6318</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHENYLACETALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHENYLACETATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHENOL__45__BETA__45__GLUCOSYLTRANSFERASE__45__RXN" name="UDP-glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10548) or (E_subulatus_03526) or (E_subulatus_06463) or (E_subulatus_11623) or (E_subulatus_17231) or (E_subulatus_08236) or (E_subulatus_05291) or (E_subulatus_03527) or (E_subulatus_11622) or (E_subulatus_05290) or (E_subulatus_07736) or (E_subulatus_11624) or (E_subulatus_17232) or (E_subulatus_17234) or (E_subulatus_02786) or (E_subulatus_07162) or (E_subulatus_17233) or (E_subulatus_09650) or (E_subulatus_22077) or (E_subulatus_22076) or (E_subulatus_22704) or (E_subulatus_05914) or (E_subulatus_22703)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Phenols_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Aryl__45__beta__45__D__45__Glucosides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHENYLALANINE__45____45__TRNA__45__LIGASE__45__RXN" name="phenylalanine-tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18305) or (E_subulatus_18306) or (E_subulatus_18304) or (E_subulatus_00284) or (E_subulatus_18302) or (E_subulatus_00285) or (E_subulatus_18303) or (E_subulatus_25781)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHE__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__PHE__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHENYLPYRUVATE__45__TAUTOMERASE__45__RXN" name="PHENYLPYRUVATE-TAUTOMERASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHENYL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ENOL__45__PHENYLPYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHENYLSERINE__45__ALDOLASE__45__RXN" name="phenylserine aldolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15876) or (E_subulatus_23527) or (E_subulatus_15873) or (E_subulatus_15874) or (E_subulatus_15875) or (E_subulatus_23528)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__644_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BENZALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSACETYLGLUCOSAMINEMUT__45__RXN" name="phosphoacetylglucosamine mutase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07582)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6906 , PWY-5514 , UDPNACETYLGALSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__6__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSGLYPHOS__45__RXN" name="phosphoglycerate kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15256) or (E_subulatus_15259) or (E_subulatus_04991) or (E_subulatus_03289) or (E_subulatus_15258) or (E_subulatus_02891) or (E_subulatus_04844) or (E_subulatus_03288) or (E_subulatus_00005) or (E_subulatus_15257) or (E_subulatus_15260)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-399 , P185-PWY , P124-PWY , PWY-1042 , P122-PWY , SUCSYN-PWY , ANAGLYCOLYSIS-PWY , PWY-5484 , GLYCOLYSIS , CALVIN-PWY , PWY-6901 , PWY-7003 , GLUCONEO-PWY , PWY-6886 , PWY-8004</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_G3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DPG_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSMANMUT__45__RXN" name="phosphomannomutase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06900) or (E_subulatus_06901) or (E_subulatus_06898) or (E_subulatus_06899)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-882 , PWY-7456 , PWY-7586 , PWY-5659</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MANNOSE__45__1P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15979_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSNACMURPENTATRANS__45__RXN" name="UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19936) or (E_subulatus_06884) or (E_subulatus_18807) or (E_subulatus_19937) or (E_subulatus_18805) or (E_subulatus_01177) or (E_subulatus_06885) or (E_subulatus_01176) or (E_subulatus_18806)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PEPTIDOGLYCANSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_C1_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9646_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_C5_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSPHAGLYPSYN__45__RXN" name="CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22910) or (E_subulatus_22908) or (E_subulatus_22909)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1545 , PWY4FS-8 , PWY-5269 , PWY-7817 , PWY-5668 , PWY4FS-7</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CDPDIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__PHOSPHATIDYL__45__GLYCEROL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSPHATIDATE__45__PHOSPHATASE__45__RXN" name="phosphatidate phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16185) or (E_subulatus_16189) or (E_subulatus_23912) or (E_subulatus_16187) or (E_subulatus_16184) or (E_subulatus_16186) or (E_subulatus_17376) or (E_subulatus_06616) or (E_subulatus_23911) or (E_subulatus_16188) or (E_subulatus_16190) or (E_subulatus_06615)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRIGLSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__PHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSPHATIDYLINOSITOL__45__3__45__PHOSPHATASE__45__RXN" name="phosphatidylinositol-3-phosphate 3-phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15371) or (E_subulatus_21423) or (E_subulatus_00732) or (E_subulatus_21424)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6368 , PWY-6580</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__177_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__1__45__phosphatidyl__45__inositols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSPHATIDYLINOSITOL__45__BISPHOSPHATASE__45__RXN" name="PI(4,5)P2phosphoinositide 5-phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10800)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6368</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHATIDYL__45__MYO__45__INOSITOL__45__45__45__BISPHOSPHA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1108_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSPHATIDYLINOSITOL__45__DEACYLASE__45__RXN" name="PHOSPHATIDYLINOSITOL-DEACYLASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13281) or (E_subulatus_13280) or (E_subulatus_13282)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__1__45__phosphatidyl__45__inositols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15180_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSPHOGLUCMUT__45__RXN" name="phosphoglucomutase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09988) or (E_subulatus_07640) or (E_subulatus_07582) or (E_subulatus_07641) or (E_subulatus_20820) or (E_subulatus_19055) or (E_subulatus_07638) or (E_subulatus_14108) or (E_subulatus_20819) or (E_subulatus_20343) or (E_subulatus_20821) or (E_subulatus_18333) or (E_subulatus_07639) or (E_subulatus_20822) or (E_subulatus_20342) or (E_subulatus_20823) or (E_subulatus_14109) or (E_subulatus_17206) or (E_subulatus_07642) or (E_subulatus_20824)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7902 , PWY-2723 , GLUCOSE1PMETAB-PWY , PWY-5384 , PWY-7343 , PWY-5661 , GLYCOCAT-PWY , PWY-5940 , PWY-622 , PWY-6981 , PWY66-422 , GLYCOGENSYNTH-PWY , PWY-5941 , PWY-6731 , PWY-3801 , PWY-6317 , PWY-6737 , PWY-7238 , PWY-7900</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__glucopyranose__45__6__45__phosphate_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSPHOGLYCERATE__45__PHOSPHATASE__45__RXN" name="PHOSPHOGLYCERATE-PHOSPHATASE-RXN" reversible="false" fast="false">
        <listOfReactants>
          <speciesReference species="M_2__45__PG_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCERATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSPHOMEVALONATE__45__KINASE__45__RXN" name="PHOSPHOMEVALONATE-KINASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23430)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-922 , PWY-7391</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__499_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__641_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHOSPHORIBULOKINASE__45__RXN" name="phosphoribulokinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18112)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: CALVIN-PWY , PWY-5723</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RIBULOSE__45__5P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__RIBULOSE__45__15__45__P2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PHYTANATE__45____45__COA__45__LIGASE__45__RXN" name="phytanate-CoA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_10154)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHYTANATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__206_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PLASTOQUINOL__45____45__PLASTOCYANIN__45__REDUCTASE__45__RXN" name="plastoquinol--plastocyanin reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00265) or (E_subulatus_07624) or (E_subulatus_07623) or (E_subulatus_22247)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Plastoquinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__Plastocyanins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_e" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Plastocyanin__45__Reduced_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PLASTOQUINONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="4" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PMPOXI__45__RXN" name="pyridoxamine 5&apos;-phosphate oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22030) or (E_subulatus_16935) or (E_subulatus_19532) or (E_subulatus_10527) or (E_subulatus_19164) or (E_subulatus_09204) or (E_subulatus_19533) or (E_subulatus_10528)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7204 , PLPSAL-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXAMINE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXAL_PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PNKIN__45__RXN" name="pyridoxine kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04123)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7204 , PLPSAL-PWY , PWY-7282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXINE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PNPOXI__45__RXN" name="pyridoxamine-phosphate oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16935) or (E_subulatus_22030) or (E_subulatus_19532) or (E_subulatus_09204) or (E_subulatus_19164) or (E_subulatus_10527) or (E_subulatus_19533) or (E_subulatus_10528)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PYRIDOXSYN-PWY , PWY-7204 , PLPSAL-PWY , PWY-7282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXINE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXAL_PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_POLYAMINE__45__OXIDASE__45__RXN" name="Polyamine oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05915) or (E_subulatus_03330)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N1__45__ACETYLSPERMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__568_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__6082_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_POLYNUCLEOTIDE__45__5__45__PHOSPHATASE__45__RXN" name="polynucleotide 5&apos;-phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18352) or (E_subulatus_18354) or (E_subulatus_18351) or (E_subulatus_18353)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7375</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__ppp__45__Pur__45__mRNA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8630_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_POLYNUCLEOTIDE__45__ADENYLYLTRANSFERASE__45__RXN" name="poly(A) polymerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13888) or (E_subulatus_13889) or (E_subulatus_11509) or (E_subulatus_11508) or (E_subulatus_03969) or (E_subulatus_03971) or (E_subulatus_21074) or (E_subulatus_23650) or (E_subulatus_03970) or (E_subulatus_11511) or (E_subulatus_11510)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PORPHOBILSYNTH__45__RXN" name="porphobilinogen synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07842)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5189 , PWY-5188</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__AMINO__45__LEVULINATE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PORPHOBILINOGEN_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PPENTOMUT__45__RXN" name="&amp;alpha;-D-ribose 1,5-phosphomutase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20342) or (E_subulatus_07640) or (E_subulatus_07638) or (E_subulatus_07642) or (E_subulatus_20343) or (E_subulatus_07641) or (E_subulatus_07639)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1296</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RIBOSE__45__1P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RIBOSE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PRAISOM__45__RXN" name="phosphoribosylanthranilate isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21176)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRPSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__5__45__PHOSPHORIBOSYL__45__ANTHRANILATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBOXYPHENYLAMINO__45__DEOXYRIBULOSE__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PREPHENATE__45__ASP__45__TRANSAMINE__45__RXN" name="PREPHENATE-ASP-TRANSAMINE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02206)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__659_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PREPHENATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PREPHENATE__45__DEHYDROGENASE__45__NADP__43____45__RXN" name="prephenate dehydrogenase (NADP+)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13405) or (E_subulatus_13406) or (E_subulatus_07858) or (E_subulatus_08604) or (E_subulatus_07857)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PREPHENATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_P__45__HYDROXY__45__PHENYLPYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PREPHENATE__45__TRANSAMINE__45__RXN" name="prephenate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02206)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3462 , PWY-6120 , PWY-3461</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__659_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PREPHENATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PREPHENATEDEHYDRAT__45__RXN" name="prephenate dehydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13405) or (E_subulatus_13406) or (E_subulatus_07858) or (E_subulatus_08604) or (E_subulatus_07857)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7432 , PHESYN</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PREPHENATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHENYL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PREPHENATEDEHYDROG__45__RXN" name="prephenate dehydrogenase (NAD+)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13405) or (E_subulatus_13406) or (E_subulatus_07858) or (E_subulatus_08604) or (E_subulatus_07857)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TYRSYN , PWY-7303</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PREPHENATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_P__45__HYDROXY__45__PHENYLPYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PRIBFAICARPISOM__45__RXN" name="1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05349) or (E_subulatus_05347) or (E_subulatus_05350) or (E_subulatus_05351) or (E_subulatus_05348)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HISTSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHORIBOSYL__45__FORMIMINO__45__AICAR__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHOSPHORIBULOSYL__45__FORMIMINO__45__AICAR__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PRODISULFREDUCT__45__A__45__RXN" name="PRODISULFREDUCT-A-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: GLUT-REDOX-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Ox__45__Glutaredoxins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXIDIZED__45__GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Glutaredoxins_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PROLINE__45____45__TRNA__45__LIGASE__45__RXN" name="proline&amp;mdash;tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12907) or (E_subulatus_12906) or (E_subulatus_12908)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRO__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRO_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Charged__45__PRO__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PROPIONYL__45__COA__45__CARBOXY__45__RXN" name="propionyl-CoA carboxylase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21382) or (E_subulatus_21383) or (E_subulatus_21385) or (E_subulatus_22034) or (E_subulatus_21386) or (E_subulatus_21387) or (E_subulatus_21384) or (E_subulatus_22033)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PROPIONMET-PWY , PWY-7384 , PWY-5789 , PWY-5743 , PWY-6728</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROPIONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__METHYL__45__MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PROTEIN__45__ARGININE__45__DEIMINASE__45__RXN" name="protein-arginine deiminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03927) or (E_subulatus_03928)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4921</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__Arginines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTEIN__45__L__45__CITRULLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PROTEIN__45__KINASE__45__RXN" name="protein kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25381) or (E_subulatus_05369) or (E_subulatus_08942) or (E_subulatus_02257) or (E_subulatus_01404) or (E_subulatus_16872) or (E_subulatus_14748) or (E_subulatus_05984) or (E_subulatus_12252) or (E_subulatus_09558) or (E_subulatus_11884) or (E_subulatus_19745) or (E_subulatus_08239) or (E_subulatus_06260) or (E_subulatus_11344) or (E_subulatus_21372) or (E_subulatus_25664) or (E_subulatus_01751) or (E_subulatus_23087) or (E_subulatus_17726) or (E_subulatus_04305) or (E_subulatus_00730) or (E_subulatus_04350) or (E_subulatus_07515) or (E_subulatus_04306) or (E_subulatus_10643) or (E_subulatus_10026) or (E_subulatus_15063) or (E_subulatus_09012) or (E_subulatus_12125) or (E_subulatus_22893) or (E_subulatus_02113) or (E_subulatus_20604) or (E_subulatus_04435) or (E_subulatus_14881) or (E_subulatus_01377) or (E_subulatus_06144) or (E_subulatus_01405) or (E_subulatus_06469) or (E_subulatus_03307) or (E_subulatus_22678) or (E_subulatus_18462) or (E_subulatus_21661) or (E_subulatus_15062) or (E_subulatus_03398) or (E_subulatus_09425) or (E_subulatus_13927) or (E_subulatus_10587) or (E_subulatus_07128) or (E_subulatus_04436) or (E_subulatus_20312) or (E_subulatus_11911) or (E_subulatus_13069) or (E_subulatus_04041) or (E_subulatus_23675) or (E_subulatus_22828) or (E_subulatus_16338) or (E_subulatus_24920) or (E_subulatus_20352) or (E_subulatus_23941) or (E_subulatus_13015) or (E_subulatus_02232) or (E_subulatus_22867) or (E_subulatus_17051) or (E_subulatus_03219) or (E_subulatus_08360) or (E_subulatus_25657) or (E_subulatus_06261) or (E_subulatus_12274) or (E_subulatus_17129) or (E_subulatus_04352) or (E_subulatus_04303) or (E_subulatus_09332) or (E_subulatus_01502) or (E_subulatus_04490) or (E_subulatus_06258) or (E_subulatus_17108) or (E_subulatus_08692) or (E_subulatus_20878) or (E_subulatus_04491) or (E_subulatus_09496) or (E_subulatus_11184) or (E_subulatus_19289) or (E_subulatus_22934) or (E_subulatus_02390) or (E_subulatus_17041) or (E_subulatus_06284) or (E_subulatus_13709) or (E_subulatus_24008) or (E_subulatus_06148) or (E_subulatus_05424) or (E_subulatus_22040) or (E_subulatus_06177) or (E_subulatus_04307) or (E_subulatus_04340) or (E_subulatus_15317) or (E_subulatus_09497) or (E_subulatus_11218) or (E_subulatus_17730) or (E_subulatus_12126) or (E_subulatus_18874) or (E_subulatus_08839) or (E_subulatus_11345) or (E_subulatus_08992) or (E_subulatus_00705) or (E_subulatus_23086) or (E_subulatus_04342) or (E_subulatus_08838) or (E_subulatus_18395) or (E_subulatus_17865) or (E_subulatus_08840) or (E_subulatus_12690) or (E_subulatus_19130) or (E_subulatus_13950) or (E_subulatus_17732) or (E_subulatus_18506) or (E_subulatus_09011) or (E_subulatus_02122) or (E_subulatus_08361) or (E_subulatus_23195) or (E_subulatus_16868) or (E_subulatus_10586) or (E_subulatus_06145) or (E_subulatus_13070) or (E_subulatus_11471) or (E_subulatus_24922) or (E_subulatus_04343) or (E_subulatus_03631) or (E_subulatus_06549) or (E_subulatus_16159) or (E_subulatus_16408) or (E_subulatus_06253) or (E_subulatus_25839) or (E_subulatus_22677) or (E_subulatus_02205) or (E_subulatus_10114) or (E_subulatus_12689) or (E_subulatus_20554) or (E_subulatus_22868) or (E_subulatus_10593) or (E_subulatus_20553) or (E_subulatus_13949) or (E_subulatus_15001) or (E_subulatus_01562) or (E_subulatus_06961) or (E_subulatus_18394) or (E_subulatus_17950) or (E_subulatus_12275) or (E_subulatus_22933) or (E_subulatus_10144) or (E_subulatus_03220) or (E_subulatus_25382) or (E_subulatus_04827) or (E_subulatus_22039) or (E_subulatus_00729) or (E_subulatus_13708) or (E_subulatus_22865) or (E_subulatus_10273) or (E_subulatus_07781) or (E_subulatus_04349) or (E_subulatus_11217) or (E_subulatus_08200) or (E_subulatus_04641) or (E_subulatus_06285) or (E_subulatus_15318) or (E_subulatus_07763) or (E_subulatus_08844) or (E_subulatus_01376) or (E_subulatus_14466) or (E_subulatus_05827) or (E_subulatus_17864) or (E_subulatus_20603) or (E_subulatus_07762) or (E_subulatus_16954) or (E_subulatus_01218) or (E_subulatus_02968) or (E_subulatus_04304) or (E_subulatus_12277) or (E_subulatus_22892) or (E_subulatus_00127) or (E_subulatus_24610) or (E_subulatus_08484) or (E_subulatus_03399) or (E_subulatus_09013) or (E_subulatus_22679) or (E_subulatus_13593) or (E_subulatus_19743) or (E_subulatus_09175) or (E_subulatus_19290) or (E_subulatus_16953) or (E_subulatus_06178) or (E_subulatus_23204) or (E_subulatus_19744) or (E_subulatus_00704) or (E_subulatus_11053) or (E_subulatus_25840) or (E_subulatus_16160) or (E_subulatus_25136) or (E_subulatus_20178) or (E_subulatus_00128) or (E_subulatus_02718) or (E_subulatus_17539) or (E_subulatus_01846) or (E_subulatus_08837) or (E_subulatus_02123) or (E_subulatus_10521) or (E_subulatus_18873) or (E_subulatus_18013) or (E_subulatus_06147) or (E_subulatus_06468) or (E_subulatus_03397) or (E_subulatus_01060) or (E_subulatus_23084) or (E_subulatus_02256) or (E_subulatus_07779) or (E_subulatus_08241) or (E_subulatus_04828) or (E_subulatus_23840) or (E_subulatus_07095) or (E_subulatus_03445) or (E_subulatus_00059) or (E_subulatus_14604) or (E_subulatus_17361) or (E_subulatus_08612) or (E_subulatus_10592) or (E_subulatus_04478) or (E_subulatus_14602) or (E_subulatus_17729) or (E_subulatus_06259) or (E_subulatus_24117) or (E_subulatus_25402) or (E_subulatus_07782) or (E_subulatus_07094) or (E_subulatus_02115) or (E_subulatus_02061) or (E_subulatus_15928) or (E_subulatus_13640) or (E_subulatus_25400) or (E_subulatus_15840) or (E_subulatus_08199) or (E_subulatus_25266) or (E_subulatus_05983) or (E_subulatus_07760) or (E_subulatus_15929) or (E_subulatus_22829) or (E_subulatus_12691) or (E_subulatus_14823) or (E_subulatus_08949) or (E_subulatus_08691) or (E_subulatus_11219) or (E_subulatus_07993) or (E_subulatus_23674) or (E_subulatus_18871) or (E_subulatus_06545) or (E_subulatus_04663) or (E_subulatus_17728) or (E_subulatus_10025) or (E_subulatus_01620) or (E_subulatus_24921) or (E_subulatus_08198) or (E_subulatus_08611) or (E_subulatus_08940) or (E_subulatus_08242) or (E_subulatus_20742) or (E_subulatus_01444) or (E_subulatus_17731) or (E_subulatus_19370) or (E_subulatus_18678) or (E_subulatus_02064) or (E_subulatus_10274) or (E_subulatus_10520) or (E_subulatus_07027) or (E_subulatus_14603) or (E_subulatus_13162) or (E_subulatus_10985) or (E_subulatus_17584) or (E_subulatus_07093) or (E_subulatus_24265) or (E_subulatus_04351) or (E_subulatus_23085) or (E_subulatus_23841) or (E_subulatus_08240) or (E_subulatus_07514) or (E_subulatus_14711) or (E_subulatus_05418) or (E_subulatus_17439) or (E_subulatus_24680) or (E_subulatus_07780) or (E_subulatus_04348) or (E_subulatus_01445) or (E_subulatus_08690) or (E_subulatus_06471) or (E_subulatus_01749) or (E_subulatus_25252) or (E_subulatus_06146) or (E_subulatus_23940) or (E_subulatus_14971) or (E_subulatus_06470) or (E_subulatus_11885) or (E_subulatus_08943) or (E_subulatus_25663) or (E_subulatus_01375) or (E_subulatus_08845) or (E_subulatus_16407) or (E_subulatus_12276) or (E_subulatus_01750) or (E_subulatus_02344) or (E_subulatus_16869) or (E_subulatus_11910) or (E_subulatus_02342) or (E_subulatus_14880) or (E_subulatus_25383) or (E_subulatus_16339) or (E_subulatus_07005) or (E_subulatus_16873) or (E_subulatus_04228) or (E_subulatus_05292) or (E_subulatus_08201) or (E_subulatus_02124) or (E_subulatus_02343) or (E_subulatus_23354) or (E_subulatus_06788) or (E_subulatus_02717) or (E_subulatus_02114) or (E_subulatus_24919) or (E_subulatus_07092) or (E_subulatus_01403) or (E_subulatus_25838) or (E_subulatus_13926) or (E_subulatus_05982) or (E_subulatus_22894) or (E_subulatus_17727) or (E_subulatus_10272) or (E_subulatus_11912) or (E_subulatus_23942) or (E_subulatus_17540) or (E_subulatus_22866) or (E_subulatus_08591) or (E_subulatus_19206) or (E_subulatus_18012) or (E_subulatus_14712) or (E_subulatus_06149) or (E_subulatus_18872) or (E_subulatus_17438) or (E_subulatus_08941) or (E_subulatus_21341) or (E_subulatus_18393) or (E_subulatus_10115) or (E_subulatus_18014) or (E_subulatus_17191) or (E_subulatus_04671) or (E_subulatus_25836) or (E_subulatus_05489) or (E_subulatus_16259) or (E_subulatus_01061) or (E_subulatus_11739) or (E_subulatus_07028) or (E_subulatus_13016) or (E_subulatus_13216) or (E_subulatus_25837) or (E_subulatus_21917) or (E_subulatus_22830) or (E_subulatus_23826) or (E_subulatus_05985) or (E_subulatus_15021) or (E_subulatus_02716) or (E_subulatus_05981) or (E_subulatus_25401) or (E_subulatus_06467) or (E_subulatus_14710) or (E_subulatus_14601) or (E_subulatus_03446) or (E_subulatus_19311) or (E_subulatus_25102) or (E_subulatus_07006) or (E_subulatus_10984) or (E_subulatus_23825) or (E_subulatus_00728) or (E_subulatus_07129) or (E_subulatus_10275) or (E_subulatus_10024) or (E_subulatus_03455) or (E_subulatus_13951) or (E_subulatus_22925) or (E_subulatus_07761) or (E_subulatus_24264)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__L__45__serine__45__or__45__L__45__threonine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Protein__45__Ser__45__or__45__Thr__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PROTEIN__45__TYROSINE__45__PHOSPHATASE__45__RXN" name="protein-tyrosine phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15399) or (E_subulatus_15371) or (E_subulatus_04737) or (E_subulatus_01055) or (E_subulatus_01178) or (E_subulatus_10800) or (E_subulatus_02420) or (E_subulatus_02194) or (E_subulatus_23946) or (E_subulatus_14526) or (E_subulatus_09094) or (E_subulatus_15739) or (E_subulatus_24825) or (E_subulatus_22048) or (E_subulatus_02195) or (E_subulatus_09096) or (E_subulatus_09095) or (E_subulatus_01058) or (E_subulatus_15738) or (E_subulatus_24394) or (E_subulatus_15398) or (E_subulatus_09092) or (E_subulatus_01056) or (E_subulatus_00732) or (E_subulatus_24826) or (E_subulatus_23947) or (E_subulatus_22331) or (E_subulatus_23362) or (E_subulatus_15397) or (E_subulatus_23948) or (E_subulatus_22047) or (E_subulatus_04529) or (E_subulatus_09093) or (E_subulatus_16551) or (E_subulatus_01057) or (E_subulatus_21808) or (E_subulatus_01179) or (E_subulatus_01054) or (E_subulatus_24228) or (E_subulatus_23057) or (E_subulatus_21809)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__tyrosine__45__phosphates_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__Tyrosines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PROTOHEMEFERROCHELAT__45__RXN" name="ferrochelatase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23140) or (E_subulatus_23142) or (E_subulatus_23143) or (E_subulatus_23141) or (E_subulatus_24842) or (E_subulatus_23144)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1415 , HEMESYN2-PWY , HEME-BIOSYNTHESIS-II</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTOHEME_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTOPORPHYRIN_IX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FE__43__2_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PROTOPORGENOXI__45__RXN" name="protoporphyrinogen oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16935) or (E_subulatus_19533) or (E_subulatus_19532)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: HEME-BIOSYNTHESIS-II , PWY-7159 , CHLOROPHYLL-SYN , PWY0-1415</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTOPORPHYRINOGEN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="3" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTOPORPHYRIN_IX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="3" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PRPPAMIDOTRANS__45__RXN" name="amidophosphoribosyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23373) or (E_subulatus_07850) or (E_subulatus_07851)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6122 , PWY-6121 , PWY-6277 , PWY-7282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__P__45__BETA__45__D__45__RIBOSYL__45__AMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PRPP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PRPPSYN__45__RXN" name="ribose phosphate diphosphokinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01470) or (E_subulatus_16210) or (E_subulatus_15930) or (E_subulatus_15931) or (E_subulatus_16209) or (E_subulatus_01472) or (E_subulatus_01473) or (E_subulatus_01539) or (E_subulatus_01471) or (E_subulatus_20326) or (E_subulatus_03977) or (E_subulatus_01560) or (E_subulatus_07613) or (E_subulatus_01561)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-662</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RIBOSE__45__5P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRPP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PRTRANS__45__RXN" name="anthranilate phosphoribosyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13402) or (E_subulatus_19186) or (E_subulatus_13400) or (E_subulatus_13401) or (E_subulatus_02910) or (E_subulatus_02245) or (E_subulatus_02248) or (E_subulatus_02247) or (E_subulatus_02246)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: TRPSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__5__45__PHOSPHORIBOSYL__45__ANTHRANILATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PRPP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ANTHRANILATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PSERPHOSPHA__45__RXN" name="L-3-phosphoserine phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19169) or (E_subulatus_19170)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Phosphoserines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Serines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PSERTRANSAM__45__RXN" name="O-phospho-L-serine:2-oxoglutarate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01138) or (E_subulatus_19983)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-8010 , SERSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__P__45__SERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__P__45__HYDROXYPYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PSERTRANSAMPYR__45__RXN" name="O-phospho-L-serine:2-oxoglutarate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01138) or (E_subulatus_19983)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PYRIDOXSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3OH__45__4P__45__OH__45__ALPHA__45__KETOBUTYRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_4__45__PHOSPHONOOXY__45__THREONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PSEUDOURIDINE__45__KINASE__45__RXN" name="PSEUDOURIDINE-KINASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6019</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__497_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PSEUDOURIDINE__45__5__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PUTTRANSAM__45__RXN" name="PUTTRANSAM-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PUTDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PUTRESCINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_4__45__AMINO__45__BUTYRALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRAMKIN__45__RXN" name="pyridoxamine kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04123)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7204 , PLPSAL-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXAMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXAMINE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRIDOXINE__45__4__45__DEHYDROGENASE__45__RXN" name="pyridoxine 4-dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01587) or (E_subulatus_17427)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7204 , PWY-7282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRIDOXAL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRIDOXKIN__45__RXN" name="pyridoxal kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04123)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7204 , PLPSAL-PWY , PWY-7282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PYRIDOXAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRIDOXAL_PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRIMSYN3__45__RXN" name="phosphomethylpyrimidine kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05007) or (E_subulatus_05009) or (E_subulatus_05008)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7282 , PWY-7357 , PWY-6890 , PWY-6910 , PWY-7356</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMINO__45__HYDROXYMETHYL__45__METHYL__45__PYR__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMINO__45__HYDROXYMETHYL__45__METHYLPYRIMIDINE__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRNUTRANSHYDROGEN__45__RXN" name="pyridine nucleotide transhydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23980) or (E_subulatus_19096) or (E_subulatus_23981) or (E_subulatus_04426) or (E_subulatus_23979)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5083</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRROLINECARBDEHYDROG__45__RXN" name="1-pyrroline-5-carboxylate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00121) or (E_subulatus_00118) or (E_subulatus_00120) or (E_subulatus_00119) or (E_subulatus_00117) or (E_subulatus_00116)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_L__45__DELTA1__45__PYRROLINE_5__45__CARBOXYLATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRROLINECARBREDUCT__45__RXN" name="pyrroline-5-carboxylate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07520) or (E_subulatus_09568)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PROSYN-PWY , ARG-PRO-PWY , PWY-6344 , PWY-3341 , PWY-4981</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__DELTA1__45__PYRROLINE_5__45__CARBOXYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PRO_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRUVATE__45__CARBOXYLASE__45__RXN" name="pyruvate carboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21148) or (E_subulatus_21149) or (E_subulatus_21151) or (E_subulatus_05704) or (E_subulatus_21150) or (E_subulatus_05705)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6146 , PWY-6142 , PWY66-399 , P42-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRUVATEORTHOPHOSPHATE__45__DIKINASE__45__RXN" name="pyruvate phosphate dikinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23681)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7115 , PWY-241 , PWY-6549 , PWY-7117</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_PYRUVDEH__45__RXN" name="PYRUVDEH-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23816) or (E_subulatus_21823) or (E_subulatus_18266) or (E_subulatus_04353) or (E_subulatus_01830) or (E_subulatus_02149) or (E_subulatus_14278)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5537 , PWY-7384 , PWY-7218 , GLYCOLYSIS-TCA-GLYOX-BYPASS , PWY-6886 , PWY-5482</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_QUERCETIN__45__23__45__DIOXYGENASE__45__RXN" name="quercetin 2,3-dioxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01277)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6848</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__520_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__PROTOCATECHUOYLPHLOROGLUCINOLCARBOXYLA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__MONOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_QUEUOSINE__45__TRNA__45__RIBOSYLTRANSFERASE__45__RXN" name="queuine tRNA-ribosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18752)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Guanine34__45__in__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_QUEUINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_tRNAs__45__with__45__queuine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GUANINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_QUINATE__45__5__45__DEHYDROGENASE__45__RXN" name="QUINATE-5-DEHYDROGENASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6416</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_QUINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DEHYDROQUINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_QUINOLINATE__45__SYNTHA__45__RXN" name="quinolinate synthetase A" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14161) or (E_subulatus_22774) or (E_subulatus_19099) or (E_subulatus_19097) or (E_subulatus_19098) or (E_subulatus_14162)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7342 , PYRIDNUCSYN-PWY , PWY-5316</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_IMINOASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_QUINOLINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_QUINOPRIBOTRANS__45__RXN" name="nicotinate-nucleotide diphosphorylase (carboxylating)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03659) or (E_subulatus_10473) or (E_subulatus_22807)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7342 , PYRIDNUCSYN-PWY , PWY-5653 , PWY-5316</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_QUINOLINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRPP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NICOTINATE_NUCLEOTIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R07063" name="R07063" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LINOLEIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8117_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R07861" name="R07861" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LINOLENIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12653_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R08184" name="R08184" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10279_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOCOSANOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R08190" name="R08190" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12646_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Eicosadienoates_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R145__45__RXN" name="methylthioribulose-1-phosphate dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01842)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4361</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1063_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8999_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R147__45__RXN" name="1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01842) or (E_subulatus_20039) or (E_subulatus_20038)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4361</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__85_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__479_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R163__45__RXN" name="R163-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07696)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_APS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R222__45__RXN" name="1-octanal dehydrogenase (NAD+)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_00192) or (E_subulatus_18015) or (E_subulatus_03414) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P221-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__371_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__195_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R223__45__RXN" name="octanoyl-CoA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P221-PWY , PWY-6920</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__195_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__196_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R344__45__RXN" name="R344-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25799)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7962</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__20909_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__690_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_P3I_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Corrinoid__45__Adenosyltransferases_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R621__45__RXN" name="nitric oxide dioxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03230)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NITRIC__45__OXIDE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NITRATE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R7__45__RXN" name="3-hydroxybutyryl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24809)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P3-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__20_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_S__45__3__45__HYDROXYBUTANOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R82__45__RXN" name="acireductone synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01842)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4361</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8999_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__HYDROXY__45__3__45__KETO__45__5__45__METHYLTHIO__45__1__45__PHOSPHOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_R83__45__RXN" name="acireductone synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01842)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4361</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__HYDROXY__45__3__45__KETO__45__5__45__METHYLTHIO__45__1__45__PHOSPHOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__85_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RETINAL__45__DEHYDROGENASE__45__RXN" name="all-trans-retinal dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16044) or (E_subulatus_16048) or (E_subulatus_16049) or (E_subulatus_16047) or (E_subulatus_16045) or (E_subulatus_16046)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RETINAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RETINOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RETINOL__45__DEHYDROGENASE__45__RXN" name="all-trans-retinol dehydrogenase (NAD)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20113) or (E_subulatus_21402)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13524_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RETINAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RETINYL__45__PALMITATE__45__ESTERASE__45__RXN" name="retinyl-palmitate esterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25832) or (E_subulatus_19092) or (E_subulatus_18257) or (E_subulatus_18262) or (E_subulatus_03117) or (E_subulatus_14865) or (E_subulatus_21870) or (E_subulatus_19094) or (E_subulatus_04105) or (E_subulatus_25092) or (E_subulatus_19095) or (E_subulatus_12303) or (E_subulatus_18261) or (E_subulatus_12304) or (E_subulatus_16013) or (E_subulatus_00063) or (E_subulatus_18259) or (E_subulatus_15207) or (E_subulatus_03119) or (E_subulatus_00064) or (E_subulatus_15388) or (E_subulatus_14143) or (E_subulatus_21869) or (E_subulatus_18263) or (E_subulatus_15338) or (E_subulatus_04561) or (E_subulatus_03121) or (E_subulatus_02795) or (E_subulatus_25438) or (E_subulatus_15387) or (E_subulatus_06890) or (E_subulatus_02797) or (E_subulatus_24432) or (E_subulatus_08500) or (E_subulatus_18256) or (E_subulatus_19093) or (E_subulatus_15339) or (E_subulatus_06891) or (E_subulatus_14668) or (E_subulatus_02796) or (E_subulatus_25439) or (E_subulatus_03118) or (E_subulatus_25833) or (E_subulatus_10229) or (E_subulatus_16015) or (E_subulatus_24429) or (E_subulatus_24431) or (E_subulatus_14705) or (E_subulatus_12305) or (E_subulatus_04562) or (E_subulatus_18255) or (E_subulatus_09863) or (E_subulatus_24430) or (E_subulatus_05151) or (E_subulatus_19091) or (E_subulatus_04563) or (E_subulatus_14145) or (E_subulatus_00065) or (E_subulatus_05150) or (E_subulatus_15337) or (E_subulatus_18258) or (E_subulatus_06892) or (E_subulatus_16014) or (E_subulatus_14144) or (E_subulatus_03122) or (E_subulatus_15859) or (E_subulatus_21634) or (E_subulatus_18260) or (E_subulatus_03120) or (E_subulatus_25091) or (E_subulatus_21230)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHOCOLA_A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Retinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PALMITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RIB5PISOM__45__RXN" name="ribose-5-phosphate isomerase A" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18449)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5723 , P185-PWY , P124-PWY , CALVIN-PWY , PWY-1861 , NONOXIPENT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RIBOSE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RIBULOSE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RIBOFLAVIN__45__SYN__45__RXN" name="riboflavin synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07329) or (E_subulatus_05669)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6168 , PWY-6167 , RIBOSYN2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIMETHYL__45__D__45__RIBITYL__45__LUMAZINE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMINO__45__RIBOSYLAMINO__45__1H__45__3H__45__PYR__45__DIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RIBOFLAVIN_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RIBOFLAVINKIN__45__RXN" name="riboflavin kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12139) or (E_subulatus_07409) or (E_subulatus_15520) or (E_subulatus_07408) or (E_subulatus_15521)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6168 , PWY-7863 , RIBOSYN2-PWY , PWY66-366 , PWY-5523</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RIBOFLAVIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FMN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RIBOFLAVINSYNDEAM__45__RXN" name="diaminohydroxyphosphoribosylaminopyrimidine deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24691)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7991 , RIBOSYN2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIAMINO__45__OH__45__PHOSPHORIBOSYLAMINO__45__PYR_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__602_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RIBOFLAVINSYNREDUC__45__RXN" name="5-amino-6-(5-phosphoribosylamino)uracil reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047) or (E_subulatus_24691)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7991 , RIBOSYN2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__602_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__1086_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RIBOKIN__45__RXN" name="ribokinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21284)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: RIBOKIN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__Ribofuranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15317_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RIBONUCLEOSIDE__45__DIP__45__REDUCTI__45__RXN" name="ribonucleoside-diphosphate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16363) or (E_subulatus_20463) or (E_subulatus_16359) or (E_subulatus_17310) or (E_subulatus_20465) or (E_subulatus_17311) or (E_subulatus_16362) or (E_subulatus_15746) or (E_subulatus_15977) or (E_subulatus_17312) or (E_subulatus_17309) or (E_subulatus_25205) or (E_subulatus_16358) or (E_subulatus_07744) or (E_subulatus_15745) or (E_subulatus_07745) or (E_subulatus_25204) or (E_subulatus_11791) or (E_subulatus_18208) or (E_subulatus_16360) or (E_subulatus_16361) or (E_subulatus_20464)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Ribonucleoside__45__Diphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Deoxy__45__Ribonucleoside__45__Diphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RIBONUCLEOSIDE__45__DIP__45__REDUCTII__45__RXN" name="2&apos;-deoxycytidine diphosphate:oxidized NrdH glutaredoxin-like protein oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16363) or (E_subulatus_20463) or (E_subulatus_16359) or (E_subulatus_17310) or (E_subulatus_20465) or (E_subulatus_17311) or (E_subulatus_16362) or (E_subulatus_15746) or (E_subulatus_15977) or (E_subulatus_17312) or (E_subulatus_17309) or (E_subulatus_25205) or (E_subulatus_16358) or (E_subulatus_07744) or (E_subulatus_15745) or (E_subulatus_07745) or (E_subulatus_25204) or (E_subulatus_11791) or (E_subulatus_18208) or (E_subulatus_16360) or (E_subulatus_16361) or (E_subulatus_20464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-166</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__NrdH__45__Proteins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Oxidized__45__NrdH__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DCDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RIBULP3EPIM__45__RXN" name="ribulose-phosphate 3-epimerase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07361) or (E_subulatus_18114)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5723 , P185-PWY , P124-PWY , P122-PWY , CALVIN-PWY , P21-PWY , PWY-1861 , NONOXIPENT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RIBULOSE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_XYLULOSE__45__5__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RNA__45__DIRECTED__45__DNA__45__POLYMERASE__45__RXN" name="RNA-DIRECTED-DNA-POLYMERASE-RXN" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14687) or (E_subulatus_18427) or (E_subulatus_14689) or (E_subulatus_05801) or (E_subulatus_02161) or (E_subulatus_13687) or (E_subulatus_03736) or (E_subulatus_10078) or (E_subulatus_05774) or (E_subulatus_07961) or (E_subulatus_22559) or (E_subulatus_22552) or (E_subulatus_07057) or (E_subulatus_07059) or (E_subulatus_07959) or (E_subulatus_05775) or (E_subulatus_06919) or (E_subulatus_14685) or (E_subulatus_18813) or (E_subulatus_06317) or (E_subulatus_22239) or (E_subulatus_21537) or (E_subulatus_21267) or (E_subulatus_18428) or (E_subulatus_21268) or (E_subulatus_06918) or (E_subulatus_07960) or (E_subulatus_13689) or (E_subulatus_22236) or (E_subulatus_25330) or (E_subulatus_01059) or (E_subulatus_03737) or (E_subulatus_09305) or (E_subulatus_22264) or (E_subulatus_05802) or (E_subulatus_07792) or (E_subulatus_22551) or (E_subulatus_02213) or (E_subulatus_14642) or (E_subulatus_09306) or (E_subulatus_06903) or (E_subulatus_25331) or (E_subulatus_22557) or (E_subulatus_25329) or (E_subulatus_22554) or (E_subulatus_07794) or (E_subulatus_13688) or (E_subulatus_06316) or (E_subulatus_12317) or (E_subulatus_20855) or (E_subulatus_03735) or (E_subulatus_22553) or (E_subulatus_07793) or (E_subulatus_06314) or (E_subulatus_07060) or (E_subulatus_07962) or (E_subulatus_06315) or (E_subulatus_25332) or (E_subulatus_17481) or (E_subulatus_06921) or (E_subulatus_22560) or (E_subulatus_10077) or (E_subulatus_22555) or (E_subulatus_13158) or (E_subulatus_05776) or (E_subulatus_16506) or (E_subulatus_00613) or (E_subulatus_11838) or (E_subulatus_07058) or (E_subulatus_02160) or (E_subulatus_00293) or (E_subulatus_10271) or (E_subulatus_00601) or (E_subulatus_19675) or (E_subulatus_07795) or (E_subulatus_00600) or (E_subulatus_11839) or (E_subulatus_14688) or (E_subulatus_10076) or (E_subulatus_14686) or (E_subulatus_22556) or (E_subulatus_10883) or (E_subulatus_00612) or (E_subulatus_00377) or (E_subulatus_07796) or (E_subulatus_22558) or (E_subulatus_06920) or (E_subulatus_14643) or (E_subulatus_22237) or (E_subulatus_00292) or (E_subulatus_22238) or (E_subulatus_25156)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Deoxy__45__Ribonucleoside__45__Triphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DNA__45__N_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DNA__45__N_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RNA__45__DIRECTED__45__RNA__45__POLYMERASE__45__RXN" name="RNA-DIRECTED-RNA-POLYMERASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15012) or (E_subulatus_20260) or (E_subulatus_15011)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Nucleoside__45__Triphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RNA__45__LIGASE__45__ATP__45__RXN" name="RNA ligase (ATP)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21195) or (E_subulatus_21194)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3Prime__45__OH__45__Terminated__45__RNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__Phospho__45__RNA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RNA__45__POLYMERASE__45__SUBUNIT__45__KINASE__45__RXN" name="RNA-POLYMERASE-SUBUNIT-KINASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15840) or (E_subulatus_16954) or (E_subulatus_04340) or (E_subulatus_16953) or (E_subulatus_20551) or (E_subulatus_03315) or (E_subulatus_20552) or (E_subulatus_04553) or (E_subulatus_07116) or (E_subulatus_10643) or (E_subulatus_04754) or (E_subulatus_07117)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DNA__45__directed__45__RNA__45__polymerases_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Phospho__45__DNA__45__directed__45__RNA__45__polymerases_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RNA__45__URIDYLYLTRANSFERASE__45__RXN" name="RNA-URIDYLYLTRANSFERASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11511) or (E_subulatus_13889) or (E_subulatus_13888) or (E_subulatus_11508) or (E_subulatus_11509) or (E_subulatus_11510)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RNA__45__Holder_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RR__45__BUTANEDIOL__45__DEHYDROGENASE__45__RXN" name="RR-BUTANEDIOL-DEHYDROGENASE-RXN" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11242)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY3O-246 , PWY-5951</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BUTANEDIOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10353_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10" name="canavaninosuccinate synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21292) or (E_subulatus_21293)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_O__45__UREIDOHOMOSERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CANAVANINOSUCCINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10034" name="RXN-10034" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6689</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10794_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSINE_DIPHOSPHATE_RIBOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10036" name="RXN-10036" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6368</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHATIDYLINOSITOL__45__345__45__TRIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__34__45__BISPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10058" name="2,5-diamino-6-(5-phosphoribitylamino)pyrimidin-4(3H)-one deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17136) or (E_subulatus_17135)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6168 , PWY-6167</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10809_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__1086_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10059" name="3-oxo-cerotoyl-[acp] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6113 , PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Lignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__cerotoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10060" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6113 , PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__cerotoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R__45__3__45__hydroxycerotoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10061" name="3-hydroxycerotyl-[acp] dehydrase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6113 , PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxycerotoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Trans__45__D2__45__hexacos__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10062" name="trans-hexacos-2-enoyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6113 , PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Trans__45__D2__45__hexacos__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Cerotoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10089" name="imidazole acetaldehyde reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_00192) or (E_subulatus_18015) or (E_subulatus_03414) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6181</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_IMIDAZOLE_ACETALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_4__45__IMIDAZOLEACETATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10460" name="N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18411) or (E_subulatus_05915) or (E_subulatus_17393) or (E_subulatus_17392) or (E_subulatus_12936) or (E_subulatus_18405) or (E_subulatus_18629) or (E_subulatus_03592) or (E_subulatus_20664)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11268_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__568_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10687_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10606" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17772) or (E_subulatus_23387) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__THYROXINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11398_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10607" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_23388) or (E_subulatus_17772)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LIOTHYRONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11400_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10608" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_17772) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__THYROXINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11401_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10609" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17772) or (E_subulatus_23387) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LIOTHYRONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11402_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10614" name="L-thyroxine sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_00494) or (E_subulatus_08626) or (E_subulatus_06138) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__THYROXINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11407_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10615" name="sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_00494) or (E_subulatus_08626) or (E_subulatus_06138) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LIOTHYRONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11408_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10616" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_23388) or (E_subulatus_17772)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11403_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11409_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10617" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_17772) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11403_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11411_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10618" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17772) or (E_subulatus_23387) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11404_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11412_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10619" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_17772) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11404_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11410_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10625" name="RXN-10625" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17252)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GERANYLGERANYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHYTYL__45__PYROPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="3" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10642" name="uroporphyrinogen I decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19236) or (E_subulatus_19239) or (E_subulatus_09205) or (E_subulatus_19237) or (E_subulatus_19235) or (E_subulatus_19238)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11444_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="4" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_COPROPORPHYRINOGEN_I_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="4" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10654" name="3-oxoacyl-[acyl-carrier-protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cis__45__Delta5__45__dodecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__cis__45__D7__45__tetradecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10655" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__cis__45__D7__45__tetradecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__hydroxy__45__cis__45__D7__45__tetraecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10656" name="3-hydroxy cis &amp;Delta;7-tetradecenoyl-[acp] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__hydroxy__45__cis__45__D7__45__tetraecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Trans__45__D2__45__cis__45__D7__45__tetradecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10657" name="cis-&amp;Delta;7-tetradecenoyl-[acp]:NAD+ oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Trans__45__D2__45__cis__45__D7__45__tetradecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Cis__45__Delta7__45__tetradecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10658" name="3-oxo-cis-&amp;Delta;9-hexadecenoyl-[acp] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cis__45__Delta7__45__tetradecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__cis__45__D9__45__hexadecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10659" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__cis__45__D9__45__hexadecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__hydroxy__45__cis__45__D9__45__hexaecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10660" name="3-hydroxy cis &amp;Delta;9-hexadecenoyl-[acp] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__hydroxy__45__cis__45__D9__45__hexaecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Trans__45__D3__45__cis__45__D9__45__hexadecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10661" name="palmitoleoyl-[acp]:NAD+ oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6282</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Trans__45__D3__45__cis__45__D9__45__hexadecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Palmitoleoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10662" name="RXN-10662" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10269_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9245_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10664" name="palmitoyl-CoA 9-desaturase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08000) or (E_subulatus_05429) or (E_subulatus_08001) or (E_subulatus_17810) or (E_subulatus_05430) or (E_subulatus_08002) or (E_subulatus_05431) or (E_subulatus_17811)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5987</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PALMITYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10269_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10696" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07245) or (E_subulatus_07244) or (E_subulatus_07246) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11517_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11518_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10697" name="OPC8-trans-2-enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11518_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11519_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10698" name="OPC8-3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11519_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11520_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10699" name="3-oxoacyl CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11520_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11521_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10700" name="3-oxoacyl CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11524_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11525_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10701" name="3-oxoacyl CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11528_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11529_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10702" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11523_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11524_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10703" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11527_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11528_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10704" name="OPC6-trans-2-enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13807) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19620) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11522_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11523_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10705" name="OPC4-trans-2-enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13807) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19621) or (E_subulatus_19350) or (E_subulatus_19620) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11526_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11527_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10706" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07244) or (E_subulatus_07245) or (E_subulatus_07246) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11521_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11522_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10707" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07244) or (E_subulatus_07245) or (E_subulatus_07246) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11525_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11526_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10708" name="RXN-10708" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21799) or (E_subulatus_16883) or (E_subulatus_16882)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11529_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__731_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10711" name="methyl indole-3-acetate methylesterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25832) or (E_subulatus_19092) or (E_subulatus_14865) or (E_subulatus_18262) or (E_subulatus_03117) or (E_subulatus_18257) or (E_subulatus_21870) or (E_subulatus_19094) or (E_subulatus_04105) or (E_subulatus_00063) or (E_subulatus_15207) or (E_subulatus_12303) or (E_subulatus_19095) or (E_subulatus_25092) or (E_subulatus_16013) or (E_subulatus_03119) or (E_subulatus_18261) or (E_subulatus_18259) or (E_subulatus_12304) or (E_subulatus_00064) or (E_subulatus_15388) or (E_subulatus_14143) or (E_subulatus_21869) or (E_subulatus_04561) or (E_subulatus_15338) or (E_subulatus_18263) or (E_subulatus_02795) or (E_subulatus_15387) or (E_subulatus_03121) or (E_subulatus_25438) or (E_subulatus_06890) or (E_subulatus_24432) or (E_subulatus_02797) or (E_subulatus_08500) or (E_subulatus_18256) or (E_subulatus_19093) or (E_subulatus_15339) or (E_subulatus_06891) or (E_subulatus_14668) or (E_subulatus_25439) or (E_subulatus_02796) or (E_subulatus_03118) or (E_subulatus_25833) or (E_subulatus_14705) or (E_subulatus_10229) or (E_subulatus_24429) or (E_subulatus_16015) or (E_subulatus_24431) or (E_subulatus_12305) or (E_subulatus_04562) or (E_subulatus_18255) or (E_subulatus_09863) or (E_subulatus_05151) or (E_subulatus_19091) or (E_subulatus_24430) or (E_subulatus_04563) or (E_subulatus_14145) or (E_subulatus_15337) or (E_subulatus_00065) or (E_subulatus_18258) or (E_subulatus_05150) or (E_subulatus_06892) or (E_subulatus_16014) or (E_subulatus_14144) or (E_subulatus_03122) or (E_subulatus_15859) or (E_subulatus_21634) or (E_subulatus_18260) or (E_subulatus_03120) or (E_subulatus_25091) or (E_subulatus_21230)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6303</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10546_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METOH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INDOLE_ACETATE_AUXIN_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10715" name="indole acetaldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_18015) or (E_subulatus_00192) or (E_subulatus_03415) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6307</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INDOLE_ACETALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_INDOLE_ACETATE_AUXIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10717" name="indole acetaldehyde reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04997) or (E_subulatus_03981) or (E_subulatus_03982) or (E_subulatus_03980) or (E_subulatus_02174) or (E_subulatus_16044) or (E_subulatus_04999) or (E_subulatus_16048) or (E_subulatus_16049) or (E_subulatus_23526) or (E_subulatus_16047) or (E_subulatus_02173) or (E_subulatus_04998) or (E_subulatus_16045) or (E_subulatus_16046) or (E_subulatus_02175) or (E_subulatus_02945)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6307</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_INDOLE_ACETALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__341_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10720" name="RXN-10720" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6309</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__476_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_KYNURENATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10721" name="3-hydroxy-L-kynurenine-oxoglutarate transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20406)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6309</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__HYDROXY__45__L__45__KYNURENINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11552_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10722" name="RXN-10722" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6309</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11552_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_XANTHURENATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10727" name="RXN-10727" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Myristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7836_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10734" name="RXN-10734" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft795_4a) or (EsuBft232_7a) or (EsuBft88_49a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6312</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="7" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="8" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11555_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="8" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="8" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10767" name="RXN-10767" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25832) or (E_subulatus_19092) or (E_subulatus_14865) or (E_subulatus_18262) or (E_subulatus_03117) or (E_subulatus_18257) or (E_subulatus_21870) or (E_subulatus_19094) or (E_subulatus_04105) or (E_subulatus_19095) or (E_subulatus_15207) or (E_subulatus_16013) or (E_subulatus_18261) or (E_subulatus_12304) or (E_subulatus_18259) or (E_subulatus_03119) or (E_subulatus_25092) or (E_subulatus_12303) or (E_subulatus_00063) or (E_subulatus_00064) or (E_subulatus_15388) or (E_subulatus_14143) or (E_subulatus_04561) or (E_subulatus_18263) or (E_subulatus_15338) or (E_subulatus_21869) or (E_subulatus_03121) or (E_subulatus_15387) or (E_subulatus_02795) or (E_subulatus_25438) or (E_subulatus_06890) or (E_subulatus_02797) or (E_subulatus_24432) or (E_subulatus_08500) or (E_subulatus_18256) or (E_subulatus_19093) or (E_subulatus_15339) or (E_subulatus_06891) or (E_subulatus_14668) or (E_subulatus_02796) or (E_subulatus_25439) or (E_subulatus_03118) or (E_subulatus_25833) or (E_subulatus_16015) or (E_subulatus_10229) or (E_subulatus_14705) or (E_subulatus_24431) or (E_subulatus_24429) or (E_subulatus_12305) or (E_subulatus_04562) or (E_subulatus_18255) or (E_subulatus_09863) or (E_subulatus_24430) or (E_subulatus_19091) or (E_subulatus_05151) or (E_subulatus_04563) or (E_subulatus_14145) or (E_subulatus_00065) or (E_subulatus_05150) or (E_subulatus_18258) or (E_subulatus_15337) or (E_subulatus_06892) or (E_subulatus_16014) or (E_subulatus_14144) or (E_subulatus_03122) or (E_subulatus_15859) or (E_subulatus_21634) or (E_subulatus_18260) or (E_subulatus_03120) or (E_subulatus_25091) or (E_subulatus_21230)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__2_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__734_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METOH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10773" name="cellobiose glucosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00877) or (E_subulatus_00876) or (E_subulatus_07881)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6788</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CELLOBIOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10777" name="serotonin sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_08626) or (E_subulatus_00494) or (E_subulatus_06138) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6313</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SEROTONIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11665_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10780" name="5-hydroxyindole acetaldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_18015) or (E_subulatus_00192) or (E_subulatus_03415) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6313</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__HYDROXYINDOLE_ACETALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__HYDROXYINDOLE_ACETATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10782" name="5-hydroxytryptophol sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_08626) or (E_subulatus_06138) or (E_subulatus_00494) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6313</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11671_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11674_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10784" name="5-hydroxytryptophol UDP-glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17772) or (E_subulatus_23387) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6313</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11671_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11673_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10814" name="phenylalanine transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02206) or (E_subulatus_16058)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5079 , PHESYN , ANAPHENOXI-PWY , PWY-8014 , PWY-6318</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHENYL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10815" name="2-oxo-3-phenylpropanoate dioxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04651)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6318</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHENYL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11495_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10841" name="all-trans-retinol dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21402)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6861 , PWY-6857</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13524_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_RETINAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10851" name="RXN-10851" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5294</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11281_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11763_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10862" name="RXN-10862" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06847)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10911" name="RXN-10911" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20113)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6342</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDROXYPHENYLGLYCOLALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11878_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10912" name="3,4-dihydroxyphenylglycolaldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_03414) or (E_subulatus_00192) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6342</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROXYPHENYLGLYCOLALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11879_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10917" name="3-methoxy-4-hydroxyphenylglycolaldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_00192) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6342</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11876_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_VANILLYL_MANDELATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10919" name="RXN-10919" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21143)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SINAPATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SINAPOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10938" name="RXN-10938" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6352</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__35__45__BISPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__177_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10939" name="RXN-10939" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07696)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_INOSITOL__45__1__45__3__45__4__45__TRIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__MYO__45__INOSITOL__45__34__45__BISPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10947" name="phosphatidylinositol-3,4-bisphosphate 3-phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15371)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6368</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__34__45__BISPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__1108_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10949" name="myo-inositol-monophosphate monophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22024) or (E_subulatus_14942) or (E_subulatus_18485) or (E_subulatus_19762) or (E_subulatus_22023) or (E_subulatus_01398) or (E_subulatus_22025) or (E_subulatus_01396) or (E_subulatus_01397) or (E_subulatus_14670) or (E_subulatus_22022) or (E_subulatus_04574)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Myo__45__inositol__45__monophosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10952" name="myo-inositol-4-phosphate monophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22024) or (E_subulatus_18485) or (E_subulatus_14942) or (E_subulatus_19762) or (E_subulatus_22023) or (E_subulatus_22025) or (E_subulatus_01398) or (E_subulatus_01396) or (E_subulatus_01397) or (E_subulatus_14670) or (E_subulatus_22022) or (E_subulatus_04574)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6363</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__MYO__45__INOSITOL__45__4__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10953" name="myo-inositol-5-phosphate monophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22024) or (E_subulatus_14942) or (E_subulatus_18485) or (E_subulatus_01396) or (E_subulatus_22023) or (E_subulatus_01398) or (E_subulatus_22025) or (E_subulatus_19762) or (E_subulatus_01397) or (E_subulatus_14670) or (E_subulatus_22022) or (E_subulatus_04574)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__6701_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10954" name="myo-inositol-6-phosphate monophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22024) or (E_subulatus_18485) or (E_subulatus_14942) or (E_subulatus_19762) or (E_subulatus_01396) or (E_subulatus_22025) or (E_subulatus_01398) or (E_subulatus_22023) or (E_subulatus_01397) or (E_subulatus_14670) or (E_subulatus_22022) or (E_subulatus_04574)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__6702_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10955" name="RXN-10955" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6365</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1107_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__178_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10958" name="phosphatidylinositol-3,5-bisphosphate 3-phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21423) or (E_subulatus_21424)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6367</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__35__45__BISPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__5__45__PHOSPHA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10961" name="RXN-10961" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6368</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1108_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__1__45__phosphatidyl__45__inositols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10962" name="RXN-10962" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6368</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__5__45__PHOSPHA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__phosphatidyl__45__inositols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10971" name="inositol hexakisphosphate 3-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24710) or (E_subulatus_24579) or (E_subulatus_24580) or (E_subulatus_24709) or (E_subulatus_24578)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6369</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MI__45__HEXAKISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11937_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10972" name="inositol hexakisphosphate 1-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24710) or (E_subulatus_24579) or (E_subulatus_24580) or (E_subulatus_24709) or (E_subulatus_24578)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6369</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MI__45__HEXAKISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11700_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10973" name="3-diphosphoinositol pentakisphosphate 5-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24710) or (E_subulatus_24579) or (E_subulatus_24580) or (E_subulatus_24709) or (E_subulatus_24578)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6369</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11937_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11939_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10974" name="1-diphosphoinositol pentakisphosphate 5-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24710) or (E_subulatus_24579) or (E_subulatus_24580) or (E_subulatus_24709) or (E_subulatus_24578)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6369</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11700_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11938_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10979" name="5-diphosphoinositol-pentakisphosphate 3-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24710) or (E_subulatus_24579) or (E_subulatus_24580) or (E_subulatus_24709) or (E_subulatus_24578)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6369</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__DIPHOSPHO__45__1D__45__MYO__45__INOSITOL__45__12346P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11939_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10981" name="RXN-10981" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6370</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__318_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__10994" name="holo-[acyl-carrier-protein] synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01014) or (E_subulatus_12579) or (E_subulatus_01013) or (E_subulatus_17853) or (E_subulatus_12578) or (E_subulatus_12580) or (E_subulatus_12581) or (E_subulatus_12582)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_VibB_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_holo__45__VibB_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1101" name="RXN-1101" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14571) or (E_subulatus_03281) or (E_subulatus_08480)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-361</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_P__45__COUMAROYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_COUMARALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1102" name="RXN-1102" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13920)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-361</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_COUMARALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_COUMARYL__45__ALCOHOL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11026" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07245) or (E_subulatus_07244) or (E_subulatus_07246) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-391 , PWY-7007 , PWY-7288 , PWY-5136</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Saturated__45__Fatty__45__Acyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TRANS__45__D2__45__ENOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11058" name="6-hydroxymelatonin sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_08626) or (E_subulatus_00494) or (E_subulatus_06138) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6398</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12014_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12015_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11059" name="N-acetyl-serotonin sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_00494) or (E_subulatus_06138) or (E_subulatus_08626) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6398</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__ACETYL__45__SEROTONIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12017_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1106" name="RXN-1106" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14571) or (E_subulatus_03281) or (E_subulatus_08480)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-361 , PWY-6027</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FERULOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CONIFERYL__45__ALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11060" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_23388) or (E_subulatus_17772)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6398</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__SEROTONIN_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12016_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11190" name="thermospermine synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18129) or (E_subulatus_18128)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SPERMIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINAMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11647_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__METHYLTHIOADENOSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11195" name="methemoglobin reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03679)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Ferrihemoglobins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ferrohemoglobins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1121" name="RXN-1121" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882) or (E_subulatus_20584)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2181</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FERULIC__45__ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__HYDROXY__45__FERULIC__45__ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11210" name="RXN-11210" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05075)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6430</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__UREIDO__45__ISOBUTYRATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__471_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11213" name="methylmalonate-semialdehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25404)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: VALDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CH3__45__MALONATE__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROPIONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1124" name="RXN-1124" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14571) or (E_subulatus_03281) or (E_subulatus_08480)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SINAPOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SINAPALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11244" name="4-coumaroyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7046 , PWY-6435 , PWY-8002</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_P__45__COUMAROYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12199_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11245" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6435</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12199_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10600_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11246" name="thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6435 , PWY-6080</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10600_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__201_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1125" name="RXN-1125" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13920)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-361</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SINAPALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SINAPYL__45__ALCOHOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1126" name="RXN-1126" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21143)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6673 , PWY-7398 , PWY-1121 , PWY-8003</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__676_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CAFFEOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11263" name="trihydroxyferuloyl spermidine O-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03930) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6442</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11667_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11668_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__113" name="RXN-113" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-102</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__140_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__236_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11329" name="bromide peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03379)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RH__45__Group_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12287_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Bromide_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11347" name="phospho-N-acetylmuramoyl-pentapeptide-transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19936) or (E_subulatus_06884) or (E_subulatus_18807) or (E_subulatus_19937) or (E_subulatus_18805) or (E_subulatus_01177) or (E_subulatus_06885) or (E_subulatus_01176) or (E_subulatus_18806)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6470</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12258_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9646_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12303_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11361" name="RXN-11361" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6823</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MPT__45__Synthases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Carboxyadenylated__45__MPT__45__synthases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11368" name="polyprenyl diphosphate transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12511) or (E_subulatus_12512) or (E_subulatus_19962) or (E_subulatus_09512) or (E_subulatus_08023) or (E_subulatus_12510)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Polyisoprenyl__45__Diphosphates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_4__45__hydroxybenzoate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_4__45__Hydroxy__45__3__45__polyprenylbenzoates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11369" name="RXN-11369" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6481</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8652_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOPAQUINONE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__DOPACHROME_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DIHYDROXY__45__PHENYLALANINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11370" name="RXN-11370" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10765) or (E_subulatus_10768) or (E_subulatus_10764) or (E_subulatus_10770) or (E_subulatus_10767) or (E_subulatus_10769) or (E_subulatus_10763) or (E_subulatus_10766)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__3__45__CARBOXY__45__3__45__AMINOPROPYL__45__L__45__HISTIDINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__3__45__CARBOXY__45__3__45__METHYLAMMONIOPROPYL__45__L__45___c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11373" name="diphthamide synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10765) or (E_subulatus_10768) or (E_subulatus_10764) or (E_subulatus_10770) or (E_subulatus_10767) or (E_subulatus_10769) or (E_subulatus_10763) or (E_subulatus_10766)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__carboxy__45__3__45__dimethylammonio__45__propyl__45__L__45__his_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIPHTINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11374" name="RXN-11374" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10765) or (E_subulatus_10768) or (E_subulatus_10764) or (E_subulatus_10770) or (E_subulatus_10767) or (E_subulatus_10769) or (E_subulatus_10763) or (E_subulatus_10766)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__3__45__CARBOXY__45__3__45__METHYLAMMONIOPROPYL__45__L__45___c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__carboxy__45__3__45__dimethylammonio__45__propyl__45__L__45__his_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11403" name="RXN-11403" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6498</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DOPACHROME_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDROXYINDOLE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11409" name="RXN-11409" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6502</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12377_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12366_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11410" name="RXN-11410" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6502</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DGTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12377_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__1905_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11474" name="3-oxo-glutaryl-[acp] methyl ester synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6519</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Malonyl__45__acp__45__methyl__45__ester_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__Ketoglutaryl__45__ACP__45__methyl__45__ester_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11476" name="3-oxo-glutaryl-[acp] methyl ester reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6519</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__Ketoglutaryl__45__ACP__45__methyl__45__ester_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__Hydroxyglutaryl__45__ACP__45__methyl__45__ester_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11477" name="3-hydroxyglutaryl-[acp] methyl ester dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6519</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__Hydroxyglutaryl__45__ACP__45__methyl__45__ester_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Enoylglutaryl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11478" name="enoylglutaryl-[acp] methyl ester reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6519</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Enoylglutaryl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Glutaryl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11479" name="3-oxo-pimeloyl-[acp] methyl ester synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6519</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Glutaryl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__Ketopimeloyl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11480" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6519</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__Ketopimeloyl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__hydroxypimeloyl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11481" name="3-hydroxypimeloyl-[acp] methyl ester dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6519</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__hydroxypimeloyl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Enoylpimeloyl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11482" name="enoylpimeloyl-[acp] methyl ester reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6519</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Enoylpimeloyl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pimeloyl__45__ACP__45__methyl__45__esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11486" name="geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01544) or (E_subulatus_01545) or (E_subulatus_01546) or (E_subulatus_24160) or (E_subulatus_01543)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6520</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GERANYLGERANYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DELTA3__45__ISOPENTENYL__45__PP_c" stoichiometry="5" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__21340_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="5" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__115" name="RXN-115" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-102</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__139_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__204_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11501" name="alkaline &amp;alpha;- galactosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20390) or (E_subulatus_01137)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6527</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__170_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__1099_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ALPHA__45__D__45__GALACTOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11519" name="RXN-11519" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00870) or (E_subulatus_07434) or (E_subulatus_07435)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6632</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__7__45__DIMETHYLXANTHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12482_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11520" name="RXN-11520" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00870) or (E_subulatus_07434) or (E_subulatus_07435)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6632</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__7__45__DIMETHYLXANTHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12483_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11521" name="RXN-11521" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00870) or (E_subulatus_07434) or (E_subulatus_07435)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6632</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_7__45__METHYLXANTHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12481_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11574" name="23S rRNA m2G2445 methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25436)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_23S__45__rRNA__45__guanine__45__2445_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_23S__45__RRNA__45__N2__45__METHYLGUANINE2445_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11576" name="16S rRNA m2G1207 methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25436)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_16S__45__rRNA__45__guanine__45__1207_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_16S__45__rRNA__45__N2__45__methylguanine1207_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11635" name="23S rRNA m2G1835 methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25436)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_23S__45__rRNA__45__guanine__45__1835_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_23S__45__rRNA__45__N2__45__methylguanine1835_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11662" name="(S)-3-hydroxybutanoyl-CoA dehydrogeanse" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6583 , PWY-7779 , PWY-7401 , PWY-6863 , PWY-5177 , P162-PWY , PWY-5789 , PWY-6883 , PWY-7778 , CENTFERM-PWY , PWY-7216</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__3__45__HYDROXYBUTANOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETOACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11667" name="(S)-3-hydroxybutanoyl-CoA dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13805) or (E_subulatus_02116) or (EsuBft327_5a) or (EsuBft1203_2a)</p>
            <p>CATEGORIES: ORTHOLOGY and MANUAL</p>
            <p>SUBSYSTEM: PWY-6583 , PWY-6863 , PWY-7401 , PWY-5177 , P162-PWY , PWY-5789 , PWY-6883 , CENTFERM-PWY , P3-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__3__45__HYDROXYBUTANOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CROTONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11734" name="medium-chain acyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_21544) or (E_subulatus_23466) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Medium__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_medium__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11737" name="cysteate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02206) or (E_subulatus_16058)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6642 , PWY-6643 , PWY-6638</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__CYSTEATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__380_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11750" name="RXN-11750" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5080</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Very__45__Long__45__Chain__45__3__45__Hydroxyacyl__45__CoAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Very__45__Long__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11784" name="RXN-11784" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft542_10a) or (E_subulatus_19482)</p>
            <p>CATEGORIES: ORTHOLOGY and MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CADAVERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12763_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11811" name="RXN-11811" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11832" name="CMP kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19892) or (E_subulatus_13577) or (E_subulatus_19893) or (E_subulatus_03631) or (E_subulatus_13578) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_13580)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7205</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11876" name="RXN-11876" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuFWS1071_10-9)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-8191</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12850_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12852_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11878" name="RXN-11878" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuFWS144_14-3)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-8191</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12853_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_4__45__METHYL__45__824__45__CHOLESTADIENOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11881" name="RXN-11881" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuFWS528_9)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_CPD__45__12852_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12853_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="4" constant="false"/>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11884" name="cholestenol delta-isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02274)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_4__45__METHYL__45__824__45__CHOLESTADIENOL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12860_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11887" name="RXN-11887" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuFWS91_14)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-8191 , PWY66-4</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__ALPHA__45__CHOLESTA__45__724__45__DIEN__45__3__45__BETA__45__OL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8646_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11917" name="7-methyl-3-oxo-6-octenoyl-CoA:acetyl-CoA C-acyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23204)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6672</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12897_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12902_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11919" name="(2E)-5-methylhexa-2,4-dienoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13805)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6672</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12904_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12905_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11921" name="3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23204)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6672</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12906_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__METHYL__45__CROTONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11922" name="RXN-11922" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft540_2a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: DISSULFRED-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DsrC__45__L__45__Cysteine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Acceptor_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_DsrC__45__persulfides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="3" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__11923" name="RXN-11923" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: DISSULFRED-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DsrC__45__disulfide__45__form_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DsrC__45__persulfides_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12002" name="UMP kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19892) or (E_subulatus_13577) or (E_subulatus_03631) or (E_subulatus_19893) or (E_subulatus_13578) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_13580)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7176</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12055" name="RXN-12055" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6689</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9007_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10794_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12056" name="RXN-12056" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6689</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Pre__45__tRNA__45__5__45__prime__45__half__45__molecules_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pre__45__tRNA__45__3__45__prime__45__half__45__molecules_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__phospho__45__ligated__45__tRNA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12088" name="&amp;alpha;-galactosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20390) or (E_subulatus_01137)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Alpha__45__D__45__Galactosides_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ALPHA__45__D__45__GALACTOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Non__45__Galactosylated__45__Galactose__45__Acceptors_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12089" name="N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18411) or (E_subulatus_17393) or (E_subulatus_05915) or (E_subulatus_17392) or (E_subulatus_12936) or (E_subulatus_18405) or (E_subulatus_18629) or (E_subulatus_03592) or (E_subulatus_20664)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6441</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SPERMIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PUTRESCINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__6082_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12090" name="N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18411) or (E_subulatus_17393) or (E_subulatus_05915) or (E_subulatus_17392) or (E_subulatus_12936) or (E_subulatus_18405) or (E_subulatus_18629) or (E_subulatus_03592) or (E_subulatus_20664)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N1__45__ACETYLSPERMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10687_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SPERMIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12091" name="N1-acetylspermidine oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18411) or (E_subulatus_05915) or (E_subulatus_17393) or (E_subulatus_17392) or (E_subulatus_12936) or (E_subulatus_18405) or (E_subulatus_18629) or (E_subulatus_03592) or (E_subulatus_20664)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6117</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__568_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PUTRESCINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10687_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12123" name="soladodine glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09669) or (E_subulatus_09668)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY18C3-4</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13080_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13081_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12125" name="brassicasterol glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09669) or (E_subulatus_09668)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__4161_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13084_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12126" name="stigmasterol glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09669) or (E_subulatus_09668)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__4162_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11606_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12127" name="cholesterol glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09669) or (E_subulatus_09668)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CHOLESTEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__556_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12128" name="&amp;beta;-sitosterol glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09669) or (E_subulatus_09668)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__4143_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11608_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12171" name="maltodextrin phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6737 , PWY-6731</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Maltodextrins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Maltodextrins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12184" name="7-hydroxylauroyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6733</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17637_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17638_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12195" name="CTP phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07754) or (E_subulatus_06476) or (E_subulatus_01794) or (E_subulatus_14955) or (E_subulatus_22833) or (E_subulatus_20419) or (E_subulatus_14248) or (E_subulatus_01714) or (E_subulatus_12646) or (E_subulatus_13555) or (E_subulatus_14957) or (E_subulatus_14533) or (E_subulatus_19429) or (E_subulatus_12649) or (E_subulatus_24658) or (E_subulatus_13554) or (E_subulatus_21364) or (E_subulatus_11663) or (E_subulatus_13969) or (E_subulatus_12213) or (E_subulatus_12748) or (E_subulatus_12211) or (E_subulatus_13188) or (E_subulatus_19691) or (E_subulatus_01713) or (E_subulatus_21475) or (E_subulatus_10392) or (E_subulatus_14956) or (E_subulatus_05373) or (E_subulatus_12647) or (E_subulatus_19730) or (E_subulatus_20416) or (E_subulatus_07733) or (E_subulatus_13487) or (E_subulatus_22834) or (E_subulatus_14154) or (E_subulatus_00278) or (E_subulatus_19428) or (E_subulatus_24659) or (E_subulatus_07752) or (E_subulatus_21360) or (E_subulatus_15589) or (E_subulatus_21359) or (E_subulatus_06184) or (E_subulatus_00231) or (E_subulatus_12209) or (E_subulatus_13968) or (E_subulatus_12749) or (E_subulatus_07262) or (E_subulatus_22538) or (E_subulatus_03327) or (E_subulatus_09220) or (E_subulatus_08550) or (E_subulatus_00805) or (E_subulatus_10006) or (E_subulatus_02379) or (E_subulatus_03328) or (E_subulatus_20418) or (E_subulatus_23400) or (E_subulatus_24662) or (E_subulatus_21474) or (E_subulatus_19692) or (E_subulatus_21550) or (E_subulatus_24661) or (E_subulatus_12214) or (E_subulatus_24656) or (E_subulatus_20417) or (E_subulatus_14330) or (E_subulatus_00228) or (E_subulatus_07732) or (E_subulatus_12210) or (E_subulatus_11850) or (E_subulatus_20791) or (E_subulatus_09223) or (E_subulatus_07028) or (E_subulatus_00279) or (E_subulatus_21743) or (E_subulatus_00229) or (E_subulatus_24660) or (E_subulatus_12141) or (E_subulatus_01252) or (E_subulatus_12645) or (E_subulatus_22300) or (E_subulatus_12212) or (E_subulatus_20415) or (E_subulatus_15855) or (E_subulatus_02378) or (E_subulatus_00706) or (E_subulatus_05372) or (E_subulatus_17245) or (E_subulatus_05487) or (E_subulatus_19729) or (E_subulatus_23399) or (E_subulatus_24986) or (E_subulatus_21549) or (E_subulatus_01715) or (E_subulatus_15021) or (E_subulatus_19613) or (E_subulatus_01136) or (E_subulatus_21362) or (E_subulatus_17264) or (E_subulatus_06904) or (E_subulatus_06183) or (E_subulatus_21564) or (E_subulatus_05486) or (E_subulatus_16684) or (E_subulatus_00232) or (E_subulatus_09224) or (E_subulatus_09222) or (E_subulatus_24655) or (E_subulatus_16983) or (E_subulatus_07027) or (E_subulatus_00806) or (E_subulatus_24657) or (E_subulatus_21363) or (E_subulatus_12648) or (E_subulatus_07753) or (E_subulatus_21581) or (E_subulatus_16063) or (E_subulatus_00230) or (E_subulatus_12208) or (E_subulatus_21361) or (E_subulatus_05916) or (E_subulatus_20963) or (E_subulatus_06905) or (E_subulatus_09221) or (E_subulatus_17265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7184 , PWY-7198 , PWY-7210 , PWY-6545</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12196" name="UTP phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07754) or (E_subulatus_06476) or (E_subulatus_01794) or (E_subulatus_14955) or (E_subulatus_20419) or (E_subulatus_22833) or (E_subulatus_14248) or (E_subulatus_01714) or (E_subulatus_12646) or (E_subulatus_13555) or (E_subulatus_14957) or (E_subulatus_14533) or (E_subulatus_19429) or (E_subulatus_12649) or (E_subulatus_24658) or (E_subulatus_13554) or (E_subulatus_21364) or (E_subulatus_11663) or (E_subulatus_13969) or (E_subulatus_12213) or (E_subulatus_12748) or (E_subulatus_12211) or (E_subulatus_13188) or (E_subulatus_19691) or (E_subulatus_01713) or (E_subulatus_21475) or (E_subulatus_10392) or (E_subulatus_14956) or (E_subulatus_05373) or (E_subulatus_12647) or (E_subulatus_19730) or (E_subulatus_20416) or (E_subulatus_07733) or (E_subulatus_13487) or (E_subulatus_22834) or (E_subulatus_14154) or (E_subulatus_19428) or (E_subulatus_00278) or (E_subulatus_24659) or (E_subulatus_07752) or (E_subulatus_21360) or (E_subulatus_15589) or (E_subulatus_21359) or (E_subulatus_06184) or (E_subulatus_00231) or (E_subulatus_13968) or (E_subulatus_12209) or (E_subulatus_12749) or (E_subulatus_07262) or (E_subulatus_09220) or (E_subulatus_03327) or (E_subulatus_22538) or (E_subulatus_08550) or (E_subulatus_00805) or (E_subulatus_10006) or (E_subulatus_02379) or (E_subulatus_03328) or (E_subulatus_20418) or (E_subulatus_23400) or (E_subulatus_24662) or (E_subulatus_21474) or (E_subulatus_19692) or (E_subulatus_21550) or (E_subulatus_24661) or (E_subulatus_12214) or (E_subulatus_24656) or (E_subulatus_20417) or (E_subulatus_14330) or (E_subulatus_00228) or (E_subulatus_07732) or (E_subulatus_12210) or (E_subulatus_11850) or (E_subulatus_20791) or (E_subulatus_09223) or (E_subulatus_07028) or (E_subulatus_00279) or (E_subulatus_21743) or (E_subulatus_00229) or (E_subulatus_24660) or (E_subulatus_01252) or (E_subulatus_12141) or (E_subulatus_12645) or (E_subulatus_12212) or (E_subulatus_22300) or (E_subulatus_20415) or (E_subulatus_15855) or (E_subulatus_02378) or (E_subulatus_00706) or (E_subulatus_05372) or (E_subulatus_17245) or (E_subulatus_05487) or (E_subulatus_19729) or (E_subulatus_23399) or (E_subulatus_24986) or (E_subulatus_21549) or (E_subulatus_01715) or (E_subulatus_15021) or (E_subulatus_19613) or (E_subulatus_01136) or (E_subulatus_21362) or (E_subulatus_17264) or (E_subulatus_06904) or (E_subulatus_06183) or (E_subulatus_05486) or (E_subulatus_21564) or (E_subulatus_16684) or (E_subulatus_00232) or (E_subulatus_09224) or (E_subulatus_09222) or (E_subulatus_24655) or (E_subulatus_07027) or (E_subulatus_16983) or (E_subulatus_00806) or (E_subulatus_24657) or (E_subulatus_21363) or (E_subulatus_12648) or (E_subulatus_07753) or (E_subulatus_21581) or (E_subulatus_16063) or (E_subulatus_00230) or (E_subulatus_12208) or (E_subulatus_21361) or (E_subulatus_05916) or (E_subulatus_20963) or (E_subulatus_06905) or (E_subulatus_09221) or (E_subulatus_17265)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12197" name="UDP phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19487) or (E_subulatus_19875) or (E_subulatus_03479) or (E_subulatus_11023) or (E_subulatus_03480) or (E_subulatus_19872) or (E_subulatus_19873) or (E_subulatus_06847) or (E_subulatus_19874)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12198" name="CDP phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19487) or (E_subulatus_19875) or (E_subulatus_03479) or (E_subulatus_11023) or (E_subulatus_03480) or (E_subulatus_19872) or (E_subulatus_19873) or (E_subulatus_06847) or (E_subulatus_19874)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12199" name="RXN-12199" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7177 , PWY-7185</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12200" name="RXN-12200" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7177 , PWY-7185</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1223" name="UDP-sulfoquinovose synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15768)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWYQT-4427</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP__45__SULFOQUINOVOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1224" name="RXN-1224" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYQT-4427</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__SULFOQUINOVOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SULFOQUINOVOSYLDIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1225" name="digalactosyldiacylglycerol synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01840) or (E_subulatus_10302) or (E_subulatus_18292) or (E_subulatus_17738) or (E_subulatus_14739) or (E_subulatus_09153) or (E_subulatus_01839) or (E_subulatus_14738) or (E_subulatus_18293) or (E_subulatus_09152)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-401 , PWY-7666</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14553_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__Galactosyl__45__12__45__diacyl__45__glycerols_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Galactosyl__45__galactosyl__45__diacyl__45__glycerols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12252" name="RXN-12252" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25832) or (E_subulatus_19092) or (E_subulatus_18257) or (E_subulatus_14865) or (E_subulatus_18262) or (E_subulatus_21870) or (E_subulatus_21230) or (E_subulatus_19094) or (E_subulatus_04105) or (E_subulatus_25092) or (E_subulatus_15207) or (E_subulatus_16013) or (E_subulatus_00063) or (E_subulatus_12304) or (E_subulatus_18259) or (E_subulatus_19095) or (E_subulatus_03119) or (E_subulatus_12303) or (E_subulatus_18261) or (E_subulatus_00064) or (E_subulatus_15388) or (E_subulatus_14143) or (E_subulatus_04561) or (E_subulatus_21869) or (E_subulatus_18263) or (E_subulatus_15338) or (E_subulatus_02795) or (E_subulatus_15387) or (E_subulatus_03121) or (E_subulatus_25438) or (E_subulatus_06890) or (E_subulatus_02797) or (E_subulatus_24432) or (E_subulatus_08500) or (E_subulatus_18256) or (E_subulatus_19093) or (E_subulatus_15339) or (E_subulatus_06891) or (E_subulatus_25439) or (E_subulatus_02796) or (E_subulatus_14668) or (E_subulatus_03118) or (E_subulatus_25833) or (E_subulatus_14705) or (E_subulatus_16015) or (E_subulatus_10229) or (E_subulatus_24429) or (E_subulatus_24431) or (E_subulatus_12305) or (E_subulatus_04562) or (E_subulatus_18255) or (E_subulatus_09863) or (E_subulatus_24430) or (E_subulatus_19091) or (E_subulatus_05151) or (E_subulatus_04563) or (E_subulatus_14145) or (E_subulatus_15337) or (E_subulatus_05150) or (E_subulatus_18258) or (E_subulatus_00065) or (E_subulatus_06892) or (E_subulatus_16014) or (E_subulatus_14144) or (E_subulatus_03122) or (E_subulatus_21634) or (E_subulatus_15859) or (E_subulatus_18260) or (E_subulatus_03120) or (E_subulatus_25091) or (E_subulatus_03117)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13174_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13172_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__173_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1226" name="galactolipid galactosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01840) or (E_subulatus_10302) or (E_subulatus_18292) or (E_subulatus_14739) or (E_subulatus_09153) or (E_subulatus_18293) or (E_subulatus_01839) or (E_subulatus_14738) or (E_subulatus_17738) or (E_subulatus_09152)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-401</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__Galactosyl__45__12__45__diacyl__45__glycerols_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10363_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12263" name="presqualene diphosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00110) or (E_subulatus_00109)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6767 , PWY-7072 , PWY-6105 , PWY-5875</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FARNESYL__45__PP_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__465_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12383" name="RXN-12383" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: TRIGLSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__409_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Triacylglycerols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12392" name="linear malto-oligosaccharide phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Linear__45__Malto__45__Oligosaccharides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Linear__45__Malto__45__Oligosaccharides_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12398" name="xyloglucan XXLG oligosaccharide &amp;beta;-galactosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18607) or (E_subulatus_14852) or (E_subulatus_00876) or (E_subulatus_07881) or (E_subulatus_00877) or (E_subulatus_14853)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6807</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13376_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__galactopyranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13375_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12399" name="xyloglucan XLXG oligosaccharide &amp;beta;-galactosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18607) or (E_subulatus_14852) or (E_subulatus_00876) or (E_subulatus_07881) or (E_subulatus_00877) or (E_subulatus_14853)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6807</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13377_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13375_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__galactopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12400" name="xyloglucan XLLG oligosaccharide &amp;beta;-galactosidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18607) or (E_subulatus_14852) or (E_subulatus_00876) or (E_subulatus_07881) or (E_subulatus_00877) or (E_subulatus_14853)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6807</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13378_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13375_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__galactopyranose_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12440" name="L-ascorbate peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16649) or (E_subulatus_04126) or (E_subulatus_17484) or (E_subulatus_04124) or (E_subulatus_16650) or (E_subulatus_08513) or (E_subulatus_04125)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6959 , PWY-6961 , PWY-6960</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DEHYDRO__45__ASCORBATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12445" name="riboflavin reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22949) or (E_subulatus_03230) or (E_subulatus_21943)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RIBOFLAVIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__316_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12460" name="RXN-12460" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1433_3a) or (EsuBft1256_7a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY490-4</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Charged__45__ASN__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ASN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ASN__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12473" name="RXN-12473" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6823</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Carboxyadenylated__45__MPT__45__synthases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__Cysteine__45__Desulfurase__45__persulfide_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Thiocarboxylated__45__MPT__45__synthases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cysteine__45__Desulfurase__45__L__45__cysteine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12484" name="RXN-12484" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04997) or (E_subulatus_03981) or (E_subulatus_03982) or (E_subulatus_03980) or (E_subulatus_04999) or (E_subulatus_16044) or (E_subulatus_02174) or (E_subulatus_16048) or (E_subulatus_16049) or (E_subulatus_23526) or (E_subulatus_16047) or (E_subulatus_02173) or (E_subulatus_04998) or (E_subulatus_16046) or (E_subulatus_16045) or (E_subulatus_02175) or (E_subulatus_02945)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETOH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12490" name="(S)-3-hydroxydecanoyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7094</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2244_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2123_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12507" name="RXN-12507" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1203_2a) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ORTHOLOGY and MANUAL</p>
            <p>SUBSYSTEM: PWY-7654</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2171_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10284_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12508" name="2-(&amp;alpha;-hydroxyethyl)-TPP:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine acetyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02152) or (E_subulatus_02150) or (E_subulatus_02149) or (E_subulatus_14278) or (E_subulatus_02151)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__lipoate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__ALPHA__45__HYDROXYETHYL__45__THPP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THIAMINE__45__PYROPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__acetylDHlipoyl_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12518" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07245) or (E_subulatus_07244) or (E_subulatus_07246) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6837</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__5__45__enoyl__45__CoA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_trans__45__2__45__cis__45__5__45__dienoyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12521" name="2,4-dienoyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01876) or (E_subulatus_12766)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6837</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TETRADEHYDROACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Trans__45__3__45__enoyl__45__CoAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12539" name="RXN-12539" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6854</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__479_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12377_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETHYLENE__45__CMPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7671_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12540" name="RXN-12540" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6854 , DETOX1-PWY-1</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FE__43__2_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FE__43__3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12377_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12541" name="RXN-12541" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6854</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_FE__43__2_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FE__43__3_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_SUPER__45__OXIDE_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12560" name="(3R)-3-hydroxypentanoyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21115)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7948</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13533_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13534_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12561" name="3-oxopantanoyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23204) or (E_subulatus_15294) or (E_subulatus_15293)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7948</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13534_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROPIONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12565" name="3-oxohexanoyl-CoA thiolase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_23204) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6863</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BUTYRYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_K__45__HEXANOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12567" name="3-hydroxyhexanoyl-CoA dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_13807) or (E_subulatus_13805) or (E_subulatus_04056) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6863</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OH__45__HEXANOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD0__45__2121_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12570" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6863</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_K__45__HEXANOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OH__45__HEXANOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12575" name="all-trans retinyl-ester hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25832) or (E_subulatus_19092) or (E_subulatus_18257) or (E_subulatus_18262) or (E_subulatus_03117) or (E_subulatus_14865) or (E_subulatus_21870) or (E_subulatus_19094) or (E_subulatus_04105) or (E_subulatus_00063) or (E_subulatus_15207) or (E_subulatus_16013) or (E_subulatus_12303) or (E_subulatus_12304) or (E_subulatus_18259) or (E_subulatus_03119) or (E_subulatus_18261) or (E_subulatus_25092) or (E_subulatus_19095) or (E_subulatus_00064) or (E_subulatus_15388) or (E_subulatus_14143) or (E_subulatus_04561) or (E_subulatus_25438) or (E_subulatus_15338) or (E_subulatus_21869) or (E_subulatus_03121) or (E_subulatus_15387) or (E_subulatus_02795) or (E_subulatus_18263) or (E_subulatus_06890) or (E_subulatus_02797) or (E_subulatus_24432) or (E_subulatus_08500) or (E_subulatus_18256) or (E_subulatus_19093) or (E_subulatus_15339) or (E_subulatus_06891) or (E_subulatus_25439) or (E_subulatus_02796) or (E_subulatus_14668) or (E_subulatus_03118) or (E_subulatus_25833) or (E_subulatus_14705) or (E_subulatus_16015) or (E_subulatus_24429) or (E_subulatus_10229) or (E_subulatus_24431) or (E_subulatus_12305) or (E_subulatus_04562) or (E_subulatus_18255) or (E_subulatus_09863) or (E_subulatus_24430) or (E_subulatus_05151) or (E_subulatus_19091) or (E_subulatus_04563) or (E_subulatus_14145) or (E_subulatus_15337) or (E_subulatus_00065) or (E_subulatus_18258) or (E_subulatus_05150) or (E_subulatus_06892) or (E_subulatus_16014) or (E_subulatus_14144) or (E_subulatus_03122) or (E_subulatus_15859) or (E_subulatus_21634) or (E_subulatus_18260) or (E_subulatus_03120) or (E_subulatus_25091) or (E_subulatus_21230)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6857</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_All__45__trans__45__Retinyl__45__Esters_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13524_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12581" name="all-trans-retinol dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21402)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6872</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CRPB__45__all__45__trans__45__Retinol_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CRPB__45__all__45__trans__45__Retinal_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12583" name="pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14278) or (E_subulatus_02149) or (E_subulatus_02152) or (E_subulatus_02150) or (E_subulatus_02151)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THIAMINE__45__PYROPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__ALPHA__45__HYDROXYETHYL__45__THPP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12585" name="all-trans-retinal dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16044) or (E_subulatus_16048) or (E_subulatus_16049) or (E_subulatus_16047) or (E_subulatus_16045) or (E_subulatus_16046)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6872</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CRPB__45__all__45__trans__45__Retinal_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cellular__45__Retinol__45__Binding__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RETINOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12587" name="S-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00241) or (E_subulatus_07898) or (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__Cysteine__45__Desulfurase__45__persulfide_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Unsulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Cysteine__45__Desulfurase__45__L__45__cysteine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Sulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12588" name="cysteine desulfurase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00241) or (E_subulatus_07898) or (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Unsulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Sulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12610" name="thiamine-phosphate diphosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05009) or (E_subulatus_23517) or (E_subulatus_05007) or (E_subulatus_05008)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6893 , PWY-6907</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13576_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMINO__45__HYDROXYMETHYL__45__METHYLPYRIMIDINE__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THIAMINE__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12611" name="thiamin phosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23517) or (E_subulatus_05009) or (E_subulatus_05007) or (E_subulatus_05008)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6894</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMINO__45__HYDROXYMETHYL__45__METHYLPYRIMIDINE__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THIAMINE__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12615" name="xanthine oxidase (superoxide-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00870) or (E_subulatus_07435) or (E_subulatus_07434) or (E_subulatus_07436) or (E_subulatus_09063) or (E_subulatus_09064)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_RH__45__Group_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Alcohols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_SUPER__45__OXIDE_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12623" name="RXN-12623" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft117_11a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6902</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Chitodextrins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CHITOBIOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12624" name="RXN-12624" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft117_11a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6902</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Chitodextrins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13227_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12647" name="RXN-12647" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Oxidized__45__Plastocyanins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Plastocyanin__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12669" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07244) or (E_subulatus_07245) or (E_subulatus_07246) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6920</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__196_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2108_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12693" name="3-beta-hydroxy-delta5-steroid dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01313) or (E_subulatus_11841)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6946</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CHOLESTEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13684_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12705" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6946 , PWY-6945</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13694_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13695_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12710" name="3-oxoacyl CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6946 , PWY-6948 , PWY-6945</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13699_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13700_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12720" name="selenate adenylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22148) or (E_subulatus_05200) or (E_subulatus_22149)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6932</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SELENATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13713_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12726" name="selenocysteine synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06191) or (E_subulatus_00981) or (E_subulatus_06192) or (E_subulatus_06194) or (E_subulatus_06193) or (E_subulatus_06195) or (E_subulatus_06197) or (E_subulatus_06196)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6936</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYLSERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__678_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__SELENOCYSTEINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12729" name="&amp;beta; L-selenocystathionase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22240)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6936</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13717_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SELENOHOMOCYSTEINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12730" name="5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19864)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6936</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SELENOHOMOCYSTEINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1302_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SELENOMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1301_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12747" name="5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA 5-dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01313) or (E_subulatus_11841)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6944</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13755_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13754_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12750" name="3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6944</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13757_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13758_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12753" name="RXN-12753" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6938</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__653_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12754" name="RXN-12754" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6938</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2472_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12789" name="3-beta-hydroxy-delta5-steroid dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01313) or (E_subulatus_11841)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6948</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__4143_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13793_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12861" name="RXN-12861" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6959 , PWY-6961</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13907_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__334_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12862" name="RXN-12862" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6959 , PWY-6961</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__DEHYDRO__45__ASCORBATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13907_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12869" name="RXN-12869" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6960</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__DEHYDRO__45__ASCORBATE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13914_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12870" name="RXN-12870" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6959</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__334_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13913_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12871" name="RXN-12871" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6959</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13913_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13912_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12872" name="RXN-12872" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6960</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13914_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__13910_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12876" name="RXN-12876" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cytochromes__45__C__45__Oxidized_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Cytochromes__45__C__45__Reduced_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_L__45__DEHYDRO__45__ASCORBATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12878" name="glutamate dehydrogenase (ferredoxin)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13550)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Oxidized__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12959" name="RXN-12959" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: TRIGLSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__PHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__12978" name="acyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5Z8Z11Z14Z17Z__45__EICOSAPENTAENOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14018_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13008" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__OXO__45__EICOSAPENTAENOYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__HYDROXY__45__DOCOSAPENTAENOYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1302" name="RXN-1302" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10541)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-481</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__1__45__PHENYLETHANOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHENYL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13061" name="L-DOPA oxidase (membrane-bound)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04816) or (E_subulatus_07983) or (E_subulatus_00885) or (E_subulatus_03621) or (E_subulatus_20787) or (E_subulatus_08208) or (E_subulatus_04818) or (E_subulatus_10375) or (E_subulatus_10196) or (E_subulatus_10195) or (E_subulatus_18153) or (E_subulatus_11644) or (E_subulatus_00884) or (E_subulatus_07399) or (E_subulatus_15328) or (E_subulatus_09951) or (E_subulatus_13795) or (E_subulatus_09948) or (E_subulatus_02578) or (E_subulatus_08206) or (E_subulatus_15819) or (E_subulatus_03619) or (E_subulatus_16728) or (E_subulatus_09950) or (E_subulatus_02228) or (E_subulatus_13421) or (E_subulatus_07400) or (E_subulatus_13422) or (E_subulatus_15381) or (E_subulatus_03620) or (E_subulatus_17576) or (E_subulatus_18484) or (E_subulatus_09947) or (E_subulatus_04817) or (E_subulatus_08210) or (E_subulatus_15820) or (E_subulatus_02227) or (E_subulatus_00478) or (E_subulatus_02579) or (E_subulatus_08207) or (E_subulatus_07984) or (E_subulatus_18154) or (E_subulatus_15380) or (E_subulatus_09949) or (E_subulatus_17575) or (E_subulatus_23779) or (E_subulatus_18759) or (E_subulatus_08209) or (E_subulatus_10289)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5399</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__DIHYDROXY__45__PHENYLALANINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DOPAQUINONE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13158" name="3-isopropylmalate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17009) or (E_subulatus_02601) or (E_subulatus_17221) or (E_subulatus_02602) or (E_subulatus_24609) or (E_subulatus_13130) or (E_subulatus_13131)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__D__45__THREO__45__HYDROXY__45__3__45__CARBOXY__45__ISOCAPROATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2K__45__4CH3__45__PENTANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13161" name="persulfide dioxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17203) or (E_subulatus_10327) or (E_subulatus_14503) or (E_subulatus_10328) or (E_subulatus_17202) or (E_subulatus_10329)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__11281_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13162" name="squalene synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00110) or (E_subulatus_00109)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5670</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FARNESYL__45__PP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SQUALENE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13163" name="(2S)-2-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21073) or (E_subulatus_16031) or (E_subulatus_16030) or (E_subulatus_03963) or (E_subulatus_16032) or (E_subulatus_16033) or (E_subulatus_21072)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__D__45__THREO__45__HYDROXY__45__3__45__CARBOXY__45__ISOCAPROATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__CARBOXY__45__3__45__HYDROXY__45__ISOCAPROATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13185" name="RXN-13185" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13384)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__133_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__130_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DEHYDRO__45__ASCORBATE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13186" name="RXN-13186" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02374) or (E_subulatus_06818) or (E_subulatus_24734) or (E_subulatus_02372) or (E_subulatus_02371) or (E_subulatus_02373) or (E_subulatus_14637)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8900_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Protein__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_FORMALDEHYDE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13202" name="ammonia-dependent carbamoyl-phosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11887) or (E_subulatus_11884) or (E_subulatus_22040) or (E_subulatus_22039) or (E_subulatus_11886) or (E_subulatus_11885) or (E_subulatus_11888)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4984</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBAMOYL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1321" name="RXN-1321" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13785) or (E_subulatus_05195) or (E_subulatus_07286) or (E_subulatus_13783) or (E_subulatus_08993)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5410 , PWY-735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LINOLENIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__725_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13279" name="RXN-13279" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21115)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__3__45__HYDROXYACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__KETOACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13290" name="15-tetracosenoate&amp;mdash;CoA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14268_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14269_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13295" name="RXN-13295" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>SUBSYSTEM: PWY-7036</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__9965_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10283_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13299" name="RXN-13299" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7036</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10283_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14276_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13303" name="RXN-13303" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>SUBSYSTEM: PWY-7036</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14276_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14281_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13307" name="RXN-13307" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>SUBSYSTEM: PWY-7036</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14281_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10279_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13313" name="RXN-13313" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10800)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPDQT__45__520_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__2183_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13323" name="15-cis-phytoene synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18355)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GERANYLGERANYL__45__PP_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12321_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13334" name="phosphatidylinositol phospholipase C" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18898) or (E_subulatus_18897)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1108_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INOSITOL__45__1__45__4__45__BISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13395" name="arachidonate 5-lipoxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05196) or (E_subulatus_05195)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-392</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ARACHIDONIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8892_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13398" name="chlorophyllide a oxygenase [overall]" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14078) or (E_subulatus_12890) or (E_subulatus_20083) or (E_subulatus_16615) or (E_subulatus_12888) or (E_subulatus_16614) or (E_subulatus_06698) or (E_subulatus_03342) or (E_subulatus_16061) or (E_subulatus_14079) or (E_subulatus_12889) or (E_subulatus_15638) or (E_subulatus_15639) or (E_subulatus_03343) or (E_subulatus_07455) or (E_subulatus_07456)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7014_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13403" name="uroporphyrinogen-III C-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20205)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_UROPORPHYRINOGEN__45__III_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_DIHYDROSIROHYDROCHLORIN_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13406" name="RXN-13406" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_BETAINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="3" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13414" name="RXN-13414" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07266) or (E_subulatus_07267)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5905</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SPERMIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14378_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13415" name="RXN-13415" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07266) or (E_subulatus_07267)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5905</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Deoxyhypusine__45__Synthase__45__Lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14378_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_N__45__4__45__aminobutylidene__45__enzyme__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__313_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13416" name="RXN-13416" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07266) or (E_subulatus_07267)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5905</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__4__45__aminobutylidene__45__enzyme__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_EIF5A__45__LYSINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_N__45__4__45__aminobutylidene__45__eIF5A__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Deoxyhypusine__45__Synthase__45__Lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13417" name="RXN-13417" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07266) or (E_subulatus_07267)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5905</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__4__45__aminobutylidene__45__eIF5A__45__lysine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9973_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13431" name="RXN-13431" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7050</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="9" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="13" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="21" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="10" constant="false"/>
          <speciesReference species="M_5Z8Z11Z14Z17Z__45__EICOSAPENTAENOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="9" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="8" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="13" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13435" name="RXN-13435" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14407_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__8120_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13442" name="RXN-13442" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7053 , PWY-7727 , PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14018_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14423_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13443" name="RXN-13443" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7053 , PWY-7727 , PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14423_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14424_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13444" name="RXN-13444" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7053 , PWY-7727 , PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14424_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14425_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13445" name="RXN-13445" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7053 , PWY-7727 , PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14425_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14426_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13449" name="short-chain acyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_21544) or (E_subulatus_25109) or (E_subulatus_25110)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Short__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Short__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13451" name="very-long-chain acyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_21544) or (E_subulatus_23466) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Very__45__long__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Very__45__Long__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13519" name="RXN-13519" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="4" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_e" stoichiometry="4" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13607" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17772) or (E_subulatus_23387) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14601_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14602_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13608" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_23388) or (E_subulatus_17772)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14601_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14604_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13614" name="decanoate--CoA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7094</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__3617_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10267_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13615" name="decanoyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_23466) or (E_subulatus_21544) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7094</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10267_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_T2__45__DECENOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13616" name="trans-&amp;Delta;2-decenoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13807) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7094</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_T2__45__DECENOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2244_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13617" name="acetyl-CoA C-octanoyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_23204) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7094</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2123_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__196_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13673" name="glutathione-4-hydroxy-2-nonenal S-transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13975) or (E_subulatus_04261) or (E_subulatus_12836) or (E_subulatus_04259) or (E_subulatus_12834) or (E_subulatus_04260) or (E_subulatus_04262) or (E_subulatus_05002) or (E_subulatus_03320) or (E_subulatus_12835)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7112</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10806_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14704_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13684" name="RXN-13684" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18185) or (E_subulatus_07947) or (E_subulatus_18183) or (E_subulatus_00324) or (E_subulatus_18182) or (E_subulatus_18184)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Mercapturates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_S__45__Substituted__45__L__45__Cysteines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13685" name="NADPH-adrenodoxin reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18122)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Oxidized__45__adrenal__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__adrenal__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13697" name="aspartate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02206) or (E_subulatus_16058)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7115 , PWY-7117</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ASPARTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXALACETIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13698" name="alanine transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16384) or (E_subulatus_16382) or (E_subulatus_16050) or (E_subulatus_20106) or (E_subulatus_06213) or (E_subulatus_16385) or (E_subulatus_16383)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7115 , PWY-7117</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13709" name="4-methylsterol monooxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="6" constant="false"/>
          <speciesReference species="M_4__45__METHYL__45__824__45__CHOLESTADIENOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="5" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="3" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4702_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="4" constant="false"/>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="6" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13722" name="RXN-13722" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft399_5a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HOMO__45__CIT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HOMO__45__I__45__CIT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13724" name="RXN-13724" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00109)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6105</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__465_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SQUALENE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13729" name="phytosphingosine 1-phosphate aldolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02592) or (E_subulatus_02591) or (E_subulatus_02593) or (E_subulatus_02589) or (E_subulatus_02588) or (E_subulatus_13281) or (E_subulatus_13282) or (E_subulatus_13280) or (E_subulatus_02590)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7119</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHTYOSPHINGOSINE__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14766_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHORYL__45__ETHANOLAMINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1381" name="RXN-1381" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: TRIGLSYN-PWY , PWY-5667</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Long__45__Chain__45__Acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACYL__45__SN__45__GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__13908" name="4-alpha-hydroxytetrahydrobiopterin dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08470) or (E_subulatus_08471) or (E_subulatus_08469) or (E_subulatus_09706)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7158</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14931_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_10__45__FORMYL__45__DIHYDROFOLATE__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14003" name="RXN-14003" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06847)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_IDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_IMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14014" name="RXN-14014" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5097 , DAPLYSINESYN-PWY , PWY-2941 , PWY-2942</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14443_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DELTA1__45__PIPERIDEINE__45__2__45__6__45__DICARBOXYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14023" name="glycolaldehyde reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03981) or (E_subulatus_04997) or (E_subulatus_02174) or (E_subulatus_03982) or (E_subulatus_03980) or (E_subulatus_16044) or (E_subulatus_04999) or (E_subulatus_16048) or (E_subulatus_16049) or (E_subulatus_23526) or (E_subulatus_16047) or (E_subulatus_02173) or (E_subulatus_16045) or (E_subulatus_16046) or (E_subulatus_04998) or (E_subulatus_02175) or (E_subulatus_02945)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7178</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLYCOLALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14025" name="5&apos;-nucleotidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13217) or (E_subulatus_17313) or (E_subulatus_02463) or (E_subulatus_02465) or (E_subulatus_17477) or (E_subulatus_10902) or (E_subulatus_10901) or (E_subulatus_17314) or (E_subulatus_02464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7821 , PWY-7185</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_URIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14026" name="5&apos;-nucleotidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13217) or (E_subulatus_17313) or (E_subulatus_02463) or (E_subulatus_02465) or (E_subulatus_17477) or (E_subulatus_10902) or (E_subulatus_10901) or (E_subulatus_17314) or (E_subulatus_02464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7185</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CYTIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1404" name="RXN-1404" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21609)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWYQT-4476 , PWY-581 , PWY-5026</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_INDOLEYL__45__CPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_INDOLE_ACETATE_AUXIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14047" name="aconitase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20171)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CIT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THREO__45__DS__45__ISO__45__CITRATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14048" name="cystathionine &amp;gamma;-lyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_22565) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: HOMOCYSDEGR-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__CYSTATHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15056_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14049" name="RXN-14049" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_22565) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HOMO__45__SER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15056_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14056" name="RXN-14056" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12177_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CH3__45__MALONATE__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14073" name="glycerophosphodiester phosphodiesterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19386) or (E_subulatus_19387) or (E_subulatus_19384) or (E_subulatus_19385) or (E_subulatus_19388)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLYCEROPHOSPHOGLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14074" name="AMP kinase (GTP)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14022) or (E_subulatus_14023)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14107" name="RXN-14107" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft715_13a) or (EsuBft1022_8a) or (EsuBft223_10a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Menaquinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Oxidized_e" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Reduced_e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Menaquinones_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14116" name="L-glutamate &amp;gamma;-semialdehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00121) or (E_subulatus_00118) or (E_subulatus_00120) or (E_subulatus_00119) or (E_subulatus_00117) or (E_subulatus_00116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ARGASEDEG-PWY , PROUT-PWY , PWY-6853</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__GLUTAMATE_GAMMA__45__SEMIALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14117" name="pyruvate kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05006) or (E_subulatus_22306) or (E_subulatus_07963) or (E_subulatus_05005)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14120" name="nucleoside diphosphate kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_03750) or (E_subulatus_23205) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_19893) or (E_subulatus_03631) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_IDP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ITP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14131" name="myristoyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_23466) or (E_subulatus_21544) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7654</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TETRADECANOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15568_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14136" name="glycerophosphodiester phosphodiesterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19386) or (E_subulatus_19387) or (E_subulatus_19384) or (E_subulatus_19388) or (E_subulatus_19385)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2030_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14139" name="UTP pyrophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_16057) or (E_subulatus_16985) or (E_subulatus_10507) or (E_subulatus_02580) or (E_subulatus_01318) or (E_subulatus_16056)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7821</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14140" name="RXN-14140" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_16057) or (E_subulatus_16985) or (E_subulatus_02580) or (E_subulatus_10507) or (E_subulatus_01318) or (E_subulatus_16056)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14147" name="RXN-14147" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16058)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__479_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14160" name="glycerophosphorylethanolamine phosphodiesterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19386) or (E_subulatus_19387) or (E_subulatus_19384) or (E_subulatus_19388) or (E_subulatus_19385)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7409</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__GLYCEROPHOSPHORYLETHANOL__45__AMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETHANOL__45__AMINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14177" name="RXN-14177" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13813) or (E_subulatus_24424) or (E_subulatus_10393) or (E_subulatus_11575) or (E_subulatus_01575) or (E_subulatus_09794) or (E_subulatus_07208) or (E_subulatus_07746) or (E_subulatus_02327) or (E_subulatus_07047) or (E_subulatus_11331) or (E_subulatus_17131) or (E_subulatus_01227)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15152_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15153_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14187" name="RXN-14187" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19487) or (E_subulatus_19875) or (E_subulatus_03479) or (E_subulatus_11023) or (E_subulatus_03480) or (E_subulatus_19872) or (E_subulatus_19873) or (E_subulatus_06847) or (E_subulatus_19874)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7210</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DCDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DCMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14189" name="catalase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08834) or (E_subulatus_13413) or (E_subulatus_13415) or (E_subulatus_13414) or (E_subulatus_08836) or (E_subulatus_08835) or (E_subulatus_08833)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METOH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FORMALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14192" name="pyruvate kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05006) or (E_subulatus_22306) or (E_subulatus_07963) or (E_subulatus_05005)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DATP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14196" name="carbamate kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11887) or (E_subulatus_11884) or (E_subulatus_22040) or (E_subulatus_22039) or (E_subulatus_11886) or (E_subulatus_11885) or (E_subulatus_11888)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7693 , PWY0-41 , CITRULLINE-DEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CARBAMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBAMOYL__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14207" name="pyruvate kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05006) or (E_subulatus_22306) or (E_subulatus_07963) or (E_subulatus_05005)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHO__45__ENOL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DGDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DGTP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14209" name="RXN-14209" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23526)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_4__45__AMINO__45__BUTYRALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_4__45__AMINO__45__BUTYRATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14223" name="ribokinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21284)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__DEOXYRIBOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DEOXY__45__RIBOSE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14224" name="RXN-14224" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_00192) or (E_subulatus_18015) or (E_subulatus_03414) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15163_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__661_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14225" name="RXN-14225" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_00192) or (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__GLUCURONOLACTONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__GLUCARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14227" name="5&apos;-nucleotidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13217) or (E_subulatus_17313) or (E_subulatus_02463) or (E_subulatus_02465) or (E_subulatus_17477) or (E_subulatus_10902) or (E_subulatus_10901) or (E_subulatus_17314) or (E_subulatus_02464)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NICOTINATE_NUCLEOTIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__8259_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14228" name="nucleoside diphosphate kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11361) or (E_subulatus_03750) or (E_subulatus_23205) or (E_subulatus_11037) or (E_subulatus_15295) or (E_subulatus_11038) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_17017) or (E_subulatus_19892) or (E_subulatus_03562) or (E_subulatus_03751) or (E_subulatus_11039) or (E_subulatus_19893) or (E_subulatus_03631) or (E_subulatus_03752) or (E_subulatus_25805) or (E_subulatus_13577) or (E_subulatus_13578) or (E_subulatus_17015) or (E_subulatus_13580) or (E_subulatus_11363) or (E_subulatus_03563) or (E_subulatus_11362) or (E_subulatus_24493) or (E_subulatus_17018) or (E_subulatus_17016)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2231_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DITP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14229" name="RXN-14229" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_21544) or (E_subulatus_23466) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__196_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2108_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14240" name="baicalein peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02016) or (E_subulatus_01446) or (E_subulatus_25320) or (E_subulatus_16649) or (E_subulatus_08105) or (E_subulatus_00420) or (E_subulatus_08107) or (E_subulatus_16650) or (E_subulatus_20015) or (E_subulatus_18334) or (E_subulatus_21986) or (E_subulatus_13034) or (E_subulatus_10790) or (E_subulatus_08798) or (E_subulatus_04125) or (E_subulatus_08800) or (E_subulatus_05686) or (E_subulatus_04126) or (E_subulatus_05281) or (E_subulatus_08456) or (E_subulatus_22471) or (E_subulatus_08513) or (E_subulatus_20011) or (E_subulatus_21987) or (E_subulatus_10127) or (E_subulatus_20014) or (E_subulatus_08106) or (E_subulatus_13035) or (E_subulatus_05687) or (E_subulatus_23617) or (E_subulatus_17484) or (E_subulatus_20013) or (E_subulatus_08455) or (E_subulatus_07826) or (E_subulatus_15057) or (E_subulatus_20012) or (E_subulatus_01447) or (E_subulatus_21225) or (E_subulatus_03379) or (E_subulatus_08799) or (E_subulatus_23616) or (E_subulatus_02015) or (E_subulatus_04124) or (E_subulatus_13544) or (E_subulatus_13036) or (E_subulatus_25319) or (E_subulatus_11753) or (E_subulatus_02233) or (E_subulatus_00421) or (E_subulatus_13545) or (E_subulatus_05280)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7214</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12724_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__15172_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14262" name="lauroyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_23466) or (E_subulatus_21544) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LAUROYLCOA__45__CPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7222_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14264" name="RXN-14264" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft935_7a) or (EsuBft186_16a) or (EsuBft444_7a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ISOVALERYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__METHYL__45__CROTONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FADH2_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14266" name="3-hydroxyisovaleryl-CoA hydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13807) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__HYDROXY__45__ISOVALERYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__1083_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14268" name="lauroyl-CoA acetyl-CoA acyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_23204) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7654</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10284_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_LAUROYLCOA__45__CPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14270" name="5-amino-4-imidazolecarboxamide phosphoribosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11708) or (E_subulatus_11704) or (E_subulatus_11706) or (E_subulatus_11705) or (E_subulatus_11709) or (E_subulatus_11707)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__3762_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRPP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AICAR_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14271" name="(S)-3-hydroxypalmitoyl-CoA oxidoreductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_02116) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7656 , PWY-7654</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2232_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__OXOPALMITOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14272" name="(E)-hexadec-2-enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_04057) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19620) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7654 , PWY-7656</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD0__45__2117_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2232_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14273" name="trans-tetradec-2-enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7654</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15568_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2171_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14274" name="decanoyl-CoA C-acyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_23204) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD0__45__2105_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10267_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14277" name="hexanoyl-CoA C-acyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_23204) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2106_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HEXANOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14278" name="hexanoyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_23466) or (E_subulatus_21544) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HEXANOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2121_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14280" name="perillyl aldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_00192) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-8029</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1084_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12443_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14284" name="maltodextrin phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALTOPENTAOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MALTOTETRAOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14285" name="maltodextrin phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALTOHEXAOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MALTOPENTAOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14286" name="maltodextrin phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD0__45__1133_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MALTOHEXAOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14290" name="RXN-14290" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12377_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__13851_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14325" name="RXN-14325" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22802) or (E_subulatus_22870)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14326" name="diphthine synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10765) or (E_subulatus_10768) or (E_subulatus_10764) or (E_subulatus_10770) or (E_subulatus_10767) or (E_subulatus_10769) or (E_subulatus_10763) or (E_subulatus_10766)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6482</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_2__45__3__45__CARBOXY__45__3__45__AMINOPROPYL__45__L__45__HISTIDINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_DIPHTINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14353" name="SHG &amp;alpha;-glucan phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7238</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Soluble__45__Heteroglycans_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Soluble__45__Heteroglycans_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14361" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_17772) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD0__45__934_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15237_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14381" name="RXN-14381" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Persulfurated__45__L__45__cysteine__45__desulfurases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__form__45__FeS__45__Cluster__45__Scaffold__45__Proteins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_S__45__CD__45__Apo__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14382" name="cysteine :[Thil sulfur-protein cysteine] sulfurtransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07898) or (E_subulatus_00241) or (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6892</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__Cysteine__45__Desulfurase__45__persulfide_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Sulfur__45__Carrier__45__Proteins__45__ThiI_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Cysteine__45__Desulfurase__45__L__45__cysteine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Sulfurylated__45__ThiI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14384" name="RXN-14384" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft102_23a) or (EsuBft610_6a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__CD__45__Apo__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CD__45__S__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14385" name="L-cysteine desulfurase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00241) or (E_subulatus_07898) or (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CD__45__S__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__CD__45__S__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14386" name="RXN-14386" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft610_6a) or (EsuBft102_23a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__CD__45__S__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CD__45__2S__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14387" name="RXN-14387" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CD__45__2S__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FE__43__3_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CD__45__SP__45__2Fe2S__45__Complex_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14388" name="RXN-14388" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CD__45__SP__45__2Fe2S__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FeS__45__Cluster__45__Co__45__Chaperones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Co__45__chaperone__45__SP__45__2Fe2S__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__Cysteine__45__Desulfurases_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14389" name="RXN-14389" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Co__45__chaperone__45__SP__45__2Fe2S__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FeS__45__Cluster__45__Chaperones__45__ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Chap__45__ATP__45__Co__45__chaperone__45__SP__45__2Fe2S__45__Complex_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14390" name="RXN-14390" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Chap__45__ATP__45__Co__45__chaperone__45__SP__45__2Fe2S__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Apo__45__FeS__45__cluster__45__proteins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FeS__45__Cluster__45__Co__45__Chaperones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Chap__45__ADP__45__apo__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2Fe__45__2S__45__proteins_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14391" name="RXN-14391" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Chap__45__ADP__45__apo__45__SP__45__Complex_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FeS__45__Cluster__45__Chaperones__45__ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__form__45__FeS__45__Cluster__45__Scaffold__45__Proteins_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14393" name="3-hydroxyacyl-CoA dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__1163_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15244_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14394" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15244_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7221_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14396" name="RXN-14396" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HYDROXYMETHYLBILANE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__11444_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14409" name="RXN-14409" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15590_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__galactopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14451" name="RXN-14451" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__9612_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15301_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14467" name="RXN-14467" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20406)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7275</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15322_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15326_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14500" name="RXN-14500" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-3861</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15373_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__mannopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14501" name="RXN-14501" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15373_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12601_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14503" name="RXN-14503" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15377_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__Xylopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14515" name="RXN-14515" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6531 , PWY-4101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15382_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BETA__45__D__45__FRUCTOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14554" name="RXN-14554" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16292)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PALMITYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROT__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_S__45__palmitoyl__45__L__45__cysteine__45__in__45__proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14576" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07245) or (E_subulatus_07244) or (E_subulatus_07246) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7291</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15436_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__1162_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14693" name="RXN-14693" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY3DJ-35471 , PWY-5525 , PWY-7247</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__Glucopyranuronate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15530_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14715" name="2-trans,4-trans-tetradecadienoyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01876) or (E_subulatus_12766)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7307</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15566_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15567_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14771" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07245) or (E_subulatus_07244) or (E_subulatus_07246) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7337</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15637_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15666_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14774" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7337</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15667_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15668_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14775" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07244) or (E_subulatus_07246) or (E_subulatus_07245) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7337</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15668_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15654_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14776" name="2,4-dienoyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01876) or (E_subulatus_12766)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7337</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15654_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15655_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14785" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07244) or (E_subulatus_07245) or (E_subulatus_11079) or (E_subulatus_07246)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7338</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15651_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15675_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14788" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7338</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15676_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15677_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14789" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07244) or (E_subulatus_07246) or (E_subulatus_07245) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7338</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15677_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15661_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14790" name="2,4-dienoyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01876) or (E_subulatus_12766)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7338</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15661_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15655_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14793" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7339</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15678_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15663_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14796" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07244) or (E_subulatus_11079) or (E_subulatus_07245) or (E_subulatus_07246)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7340</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15684_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15685_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14799" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7340</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15687_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15688_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14803" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7340</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15691_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15692_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14808" name="RXN-14808" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15699_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__arabinopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14809" name="RXN-14809" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7295 , PWY-5517</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__arabinofuranose_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__arabinopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14811" name="RXN-14811" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15616_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9569_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14812" name="RXN-14812" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15709_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FRUCTOSE__45__6P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14813" name="RXN-14813" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15619_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__Fucopyranoses_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14903" name="proline dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06840) or (E_subulatus_06839)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6922 , PROUT-PWY , PWY-5737 , CITRULBIO-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ETR__45__Quinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRO_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETR__45__Quinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DELTA1__45__PYRROLINE_5__45__CARBOXYLATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14906" name="protein serine/threonine/tyrosine kinase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10408) or (E_subulatus_18635) or (E_subulatus_25115) or (E_subulatus_00026) or (E_subulatus_05897) or (E_subulatus_01751) or (E_subulatus_01749) or (E_subulatus_00028) or (E_subulatus_25118) or (E_subulatus_05571) or (E_subulatus_07438) or (E_subulatus_24275) or (E_subulatus_00268) or (E_subulatus_13141) or (E_subulatus_03220) or (E_subulatus_12768) or (E_subulatus_14261) or (E_subulatus_05893) or (E_subulatus_06209) or (E_subulatus_13138) or (E_subulatus_13140) or (E_subulatus_22679) or (E_subulatus_21727) or (E_subulatus_13739) or (E_subulatus_22677) or (E_subulatus_21728) or (E_subulatus_05896) or (E_subulatus_07437) or (E_subulatus_01750) or (E_subulatus_00027) or (E_subulatus_05894) or (E_subulatus_13139) or (E_subulatus_25117) or (E_subulatus_05895) or (E_subulatus_03219) or (E_subulatus_25116) or (E_subulatus_14697) or (E_subulatus_05898) or (E_subulatus_08563) or (E_subulatus_06208) or (E_subulatus_22678) or (E_subulatus_12769) or (E_subulatus_00025) or (E_subulatus_14190)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Proteins__45__L__45__Threonines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__Phosphothreonines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14950" name="lipoyl synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14026) or (E_subulatus_14025) or (E_subulatus_01352)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7382</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Sulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Reduced__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Octanoylated__45__Gcv__45__H_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTEIN__45__LIPOYLLYSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CH33ADO_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Unsulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Oxidized__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14957" name="lipoyl synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14026) or (E_subulatus_14025) or (E_subulatus_01352)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7382</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_a__45__pyruvate__45__dehydrogenase__45__E2__45__protein__45__Nsup_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Sulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MET_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CH33ADO_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Unsulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Oxidized__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__lipoate_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14959" name="lipoyl synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14026) or (E_subulatus_14025) or (E_subulatus_01352)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7382</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_a__45__2__45__oxoglutarate__45__dehydrogenase__45__E2__45__protei_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Sulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Reduced__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Oxo__45__glutarate__45__dehydrogenase__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CH33ADO_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Unsulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Oxidized__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14971" name="succinate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24290) or (E_subulatus_07072) or (E_subulatus_24292) or (E_subulatus_24289) or (E_subulatus_24294) or (E_subulatus_20203) or (E_subulatus_24287) or (E_subulatus_24286) or (E_subulatus_07071) or (E_subulatus_24295) or (E_subulatus_24288) or (E_subulatus_24296) or (E_subulatus_24291) or (E_subulatus_24293)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P105-PWY , PWY-6969 , PWY-5690 , PWY-7254 , PWY-6728 , PWY-561 , TCA</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ETR__45__Quinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETR__45__Quinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14972" name="RXN-14972" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__hexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__Oxo__45__octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14973" name="RXN-14973" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__Oxo__45__octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14981" name="(3R)-naringenin 3-dioxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15024) or (E_subulatus_19163) or (E_subulatus_15023)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14042_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15886_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14986" name="3-ethylmalate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17009) or (E_subulatus_02601) or (E_subulatus_17221) or (E_subulatus_02602) or (E_subulatus_24609) or (E_subulatus_13130) or (E_subulatus_13131)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7396</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1130_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__3618_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__14997" name="RXN-14997" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15318_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15895_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15005" name="[LysW]-L-glutamate 5-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19234)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7400</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LysW__45__L__45__glutamate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_LysW__45__L__45__glutamate__45__5__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15006" name="N-acetyl-gamma-glutamyl-phosphate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21322) or (E_subulatus_21324) or (E_subulatus_21321) or (E_subulatus_21320) or (E_subulatus_21323) or (E_subulatus_20194)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7400</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LysW__45__L__45__glutamate__45__5__45__phosphate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_LysW__45__L__45__glutamate__45__5__45__semialdehyde_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15007" name="[LysW]-L-glutamate 5-semialdehyde transaminase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20725)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7400</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LysW__45__L__45__ornithine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_LysW__45__L__45__glutamate__45__5__45__semialdehyde_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1501_METACYC18__46__5" name="RXN-1501_METACYC18.5" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (Ec-21_005150) or (Ec-04_004650)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHATIDYLCHOLINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__Lysophosphatidylcholines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LINOLENIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15035" name="lyso-phosphatidylethanolaminelipase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13048) or (E_subulatus_13047) or (E_subulatus_13046)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7409</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8355_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OLEATE__45__CPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__GLYCEROPHOSPHORYLETHANOL__45__AMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15036" name="acyl-CoA:lyso-phosphatidylethanolamine acyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7409</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8355_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8291_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15043" name="RXN-15043" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7411 , PWY-7417</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__LYSOPHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__8268_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15044" name="RXN-15044" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7411</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15924_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15045" name="RXN-15045" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7411</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__1__45__LYSOPHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15046" name="RXN-15046" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7411</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15924_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__1__45__LYSOPHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15065" name="phospholipase A2" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02033) or (E_subulatus_08800) or (E_subulatus_08799) or (E_subulatus_08798)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7416</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__2__45__DIPALMITOYLPHOSPHATIDYLCHOLINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PALMITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__8343_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15066" name="acyl-CoA:lyso-phosphatidylcholine acyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7416</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PALMITYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__8343_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__2__45__DIPALMITOYLPHOSPHATIDYLCHOLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15067" name="phospholipase A2" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08800) or (E_subulatus_02033) or (E_subulatus_08799) or (E_subulatus_08798)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7409</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8291_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8355_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OLEATE__45__CPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15068" name="phospholipase A2" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02033) or (E_subulatus_08799) or (E_subulatus_08800) or (E_subulatus_08798)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7417</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8268_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OLEATE__45__CPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__LYSOPHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15117" name="RXN-15117" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02079) or (E_subulatus_23605) or (E_subulatus_22076) or (E_subulatus_10700) or (E_subulatus_05693) or (E_subulatus_11622) or (E_subulatus_18370) or (E_subulatus_24765) or (E_subulatus_00664) or (E_subulatus_11507) or (E_subulatus_14458) or (E_subulatus_19647)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-7817</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__Glucosyl__45__12__45__diacyl__45__glycerols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_diacyl__45__3__45__O__45__glucl__45__1__45__6__45__gluc__45__sn__45__glycerol_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15121" name="RXN-15121" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5437 , HOMOCYSDEGR-PWY , ILEUSYN-PWY , PWY-5826 , PWY-701</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15056_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__16013_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15122" name="RXN-15122" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24341)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5826 , PWY-5437 , ILEUSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THR_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15056_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15123" name="RXN-15123" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5437 , HOMOCYSDEGR-PWY , PWY-5826 , ILEUSYN-PWY , PWY-701</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16013_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__OXOBUTANOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15124" name="RXN-15124" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: LCYSDEG-PWY , PWY-3661 , PWY0-1535 , SERDEG-PWY , PWY-5497 , TRYPDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__AMINOACRYLATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__16015_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15125" name="RXN-15125" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05630) or (E_subulatus_05629) or (E_subulatus_08899)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3661 , SERDEG-PWY , PWY-5497</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__AMINOACRYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15127" name="RXN-15127" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: LCYSDEG-PWY , PWY-3661 , PWY0-1535 , SERDEG-PWY , PWY-5497 , TRYPDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16015_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15128" name="RXN-15128" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft610_6a) or (EsuBft739_6a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYSTINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__AMINOACRYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THIOCYSTEINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15129" name="RXN-15129" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_22565) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: LCYSDEG-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__AMINOACRYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15130" name="cystathionine &amp;gamma;-lyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_22565) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-801</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__CYSTATHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__OXOBUTANOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15131" name="L-cystathione &amp;beta;-lyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22240)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-702 , HOMOSER-METSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__CYSTATHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__AMINOACRYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15137" name="RXN-15137" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22240)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13717_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__AMINOACRYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SELENOHOMOCYSTEINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15139" name="RXN-15139" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12377_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ADENINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2461_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15261" name="dihydropterin deaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06189) or (E_subulatus_05923)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7442</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__1718_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16458_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15268" name="RXN-15268" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft797_19a) or (EsuBft184_14a) or (EsuBft465_9a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BETA__45__D__45__GALACTOSYL__45__ETCETERA__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GUANOSINE_DIPHOSPHATE_FUCOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__16475_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15271" name="RXN-15271" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7434</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CMP__45__N__45__ACETYL__45__NEURAMINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_B__45__Gal__45__14__45__NacGlc__45__R_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16483_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15276" name="&amp;beta;-N-acetylglucosaminylglycopeptide &amp;beta;-1,4-galactosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19465) or (E_subulatus_19464) or (E_subulatus_01584)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7434 , PWY-7837</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14553_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__BETA__45__D__45__GLUCOSAMINYL__45__13__45__ETCETERA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_i__45__Antigens_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15277" name="RXN-15277" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7434</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__N__45__ACETYL__45__D__45__GLUCOSAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_i__45__Antigens_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16494_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15278" name="&amp;beta;-N-acetylglucosaminylglycopeptide &amp;beta;-1,4-galactosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19465) or (E_subulatus_19464) or (E_subulatus_01584)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7434 , PWY-7837</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14553_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16494_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_I__45__antigens_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15288" name="luteolin-7-O-diglucuronide peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01446) or (E_subulatus_02016) or (E_subulatus_16649) or (E_subulatus_25320) or (E_subulatus_08105) or (E_subulatus_00420) or (E_subulatus_08107) or (E_subulatus_16650) or (E_subulatus_20015) or (E_subulatus_18334) or (E_subulatus_21986) or (E_subulatus_13034) or (E_subulatus_10790) or (E_subulatus_08798) or (E_subulatus_04125) or (E_subulatus_08800) or (E_subulatus_05686) or (E_subulatus_04126) or (E_subulatus_05281) or (E_subulatus_08456) or (E_subulatus_22471) or (E_subulatus_08513) or (E_subulatus_20011) or (E_subulatus_21987) or (E_subulatus_10127) or (E_subulatus_20014) or (E_subulatus_08106) or (E_subulatus_13035) or (E_subulatus_05687) or (E_subulatus_23617) or (E_subulatus_17484) or (E_subulatus_20013) or (E_subulatus_08455) or (E_subulatus_07826) or (E_subulatus_15057) or (E_subulatus_20012) or (E_subulatus_01447) or (E_subulatus_21225) or (E_subulatus_03379) or (E_subulatus_08799) or (E_subulatus_23616) or (E_subulatus_02015) or (E_subulatus_04124) or (E_subulatus_13544) or (E_subulatus_13036) or (E_subulatus_25319) or (E_subulatus_02233) or (E_subulatus_00421) or (E_subulatus_11753) or (E_subulatus_13545) or (E_subulatus_05280)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7445</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LUTEOLIN__45__7__45__O__45__BETA__45__D__45__DIGLUCURONIDE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_a__45__radical__45__of__45__luteolin__45__7__45__iOi__45__diglucuronid_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15345" name="RXN-15345" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15318_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__16551_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15346" name="RXN-15346" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__16551_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__15895_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15348" name="RXN-15348" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5285</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXIDIZED__45__GLUTATHIONE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11281_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15378" name="RXN-15378" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24290) or (E_subulatus_07072) or (E_subulatus_24292) or (E_subulatus_24289) or (E_subulatus_24294) or (E_subulatus_20203) or (E_subulatus_24287) or (E_subulatus_24286) or (E_subulatus_07071) or (E_subulatus_24295) or (E_subulatus_24288) or (E_subulatus_24296) or (E_subulatus_24291) or (E_subulatus_24293)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__9612_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15301_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15451" name="RXN-15451" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PLASTOQUINONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="4" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Plastoquinols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15468" name="RXN-15468" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Oxidized__45__ferredoxins_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Reduced__45__ferredoxins_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15509" name="RXN-15509" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01110) or (E_subulatus_11809) or (E_subulatus_14260) or (E_subulatus_11810)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__Histidines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_23__45__DIPHOSPHOGLYCERATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Protein__45__pi__45__phospho__45__L__45__histidines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16758_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15510" name="RXN-15510" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01110) or (E_subulatus_11809) or (E_subulatus_14260) or (E_subulatus_11810)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__PG_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__pi__45__phospho__45__L__45__histidines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_23__45__DIPHOSPHOGLYCERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__Histidines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15511" name="RXN-15511" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01110) or (E_subulatus_11809) or (E_subulatus_14260) or (E_subulatus_11810)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6405</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__Histidines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_23__45__DIPHOSPHOGLYCERATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Protein__45__pi__45__phospho__45__L__45__histidines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_G3P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15512" name="RXN-15512" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01110) or (E_subulatus_11809) or (E_subulatus_14260) or (E_subulatus_11810)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__pi__45__phospho__45__L__45__histidines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16758_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Protein__45__Histidines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_23__45__DIPHOSPHOGLYCERATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15513" name="phosphoglycerate mutase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01110) or (E_subulatus_11809) or (E_subulatus_14260) or (E_subulatus_11810)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P122-PWY , PWY-5484 , ANAGLYCOLYSIS-PWY , GLYCOLYSIS , PWY-1622 , PWY66-399 , PWY-8004</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__PG_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_G3P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15581" name="D-serine ammonia-lyase (pyruvate-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05630) or (E_subulatus_08899) or (E_subulatus_05629)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1535</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__SERINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__AMINOACRYLATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15587" name="indoxyl sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_08626) or (E_subulatus_06138) or (E_subulatus_00494) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INDOXYL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16817_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15588" name="4-methylphenol sulfotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_00494) or (E_subulatus_08626) or (E_subulatus_06138) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__108_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16819_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15589" name="RXN-15589" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00904) or (E_subulatus_08627) or (E_subulatus_00654) or (E_subulatus_08626) or (E_subulatus_00494) or (E_subulatus_06138) or (E_subulatus_06137) or (E_subulatus_17846) or (E_subulatus_00905) or (E_subulatus_17845)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14115_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16825_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15635" name="RXN-15635" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19833)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6654</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYLENETETRAHYDROMETHANOPTERIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETO__45__ISOVALERATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_THMPT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__DEHYDROPANTOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15651" name="RXN-15651" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETO__45__GLUTARAMATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__16876_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15680" name="3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine glutathione S-transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13975) or (E_subulatus_12836) or (E_subulatus_04261) or (E_subulatus_04259) or (E_subulatus_12834) or (E_subulatus_04260) or (E_subulatus_04262) or (E_subulatus_05002) or (E_subulatus_03320) or (E_subulatus_12835)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7533</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17045_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17046_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15684" name="FAD-dependent 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine dithiol oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09364) or (E_subulatus_02059) or (E_subulatus_18020) or (E_subulatus_02058) or (E_subulatus_12423) or (E_subulatus_09363) or (E_subulatus_09362) or (E_subulatus_02057)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7533</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17049_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17050_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15733" name="2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05199) or (E_subulatus_05198)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6148</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16953_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__16954_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15815" name="RXN-15815" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cytochromes__45__C__45__Oxidized_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Cytochromes__45__C__45__Reduced_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15816" name="RXN-15816" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft715_13a) or (EsuBft223_10a) or (EsuBft1022_8a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cytochromes__45__C__45__Oxidized_e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ETR__45__Quinols_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETR__45__Quinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Reduced_e" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15829" name="RXN-15829" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft223_10a) or (EsuBft715_13a) or (EsuBft1022_8a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6692</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="4" constant="false"/>
          <speciesReference species="M_Reduced__45__CycA1__45__cytochromes_e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_e" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__CycA1__45__cytochromes_e" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15830" name="cytochrome-c oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19062) or (E_subulatus_02280) or (E_subulatus_01151) or (E_subulatus_01159) or (E_subulatus_20511) or (E_subulatus_00014) or (E_subulatus_02281) or (E_subulatus_20512) or (E_subulatus_17194) or (E_subulatus_02279) or (E_subulatus_03225) or (E_subulatus_20497) or (E_subulatus_17195)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6692</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cytochromes__45__C__45__Reduced_e" stoichiometry="4" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="8" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_e" stoichiometry="4" constant="false"/>
          <speciesReference species="M_Cytochromes__45__C__45__Oxidized_e" stoichiometry="4" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15831" name="RXN-15831" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Oxidized__45__CycA1__45__cytochromes_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Reduced__45__CycA1__45__cytochromes_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15881" name="cysteine desulfurase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00241) or (E_subulatus_07898) or (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__Cysteine__45__Desulfurases_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Persulfurated__45__L__45__cysteine__45__desulfurases_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15889" name="holo-[acyl-carrier-protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01014) or (E_subulatus_12579) or (E_subulatus_01013) or (E_subulatus_17853) or (E_subulatus_12578) or (E_subulatus_12580) or (E_subulatus_12581) or (E_subulatus_12582)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: ENTBACSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Apo__45__EntF_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Holo__45__EntF_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__15910" name="RXN-15910" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft441_11a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-842</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALTOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16016" name="RXN-16016" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7583</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="22" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="9" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="14" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="10" constant="false"/>
          <speciesReference species="M_ARACHIDONIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="9" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="8" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="14" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16027" name="RXN-16027" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16126) or (E_subulatus_16123) or (E_subulatus_16121) or (E_subulatus_16124) or (E_subulatus_16122) or (E_subulatus_16125) or (E_subulatus_10095) or (E_subulatus_09249)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17272_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14553_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__2187_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1603" name="RXN-1603" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: LIPAS-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__409_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__504_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16030" name="RXN-16030" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16185) or (E_subulatus_16189) or (E_subulatus_23912) or (E_subulatus_16187) or (E_subulatus_16186) or (E_subulatus_16184) or (E_subulatus_17376) or (E_subulatus_06616) or (E_subulatus_23911) or (E_subulatus_16188) or (E_subulatus_16190) or (E_subulatus_06615)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17273_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17271_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16041" name="RXN-16041" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6958</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17278_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14392_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16042" name="RXN-16042" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6958</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14394_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17281_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16043" name="lysophospholipid &amp;gamma;-linolenoyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5353</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Gamma__45__linolenoyl__45__groups_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GAMMA__45__LINOLENOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16044" name="RXN-16044" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5353</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14407_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17283_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16045" name="lysophospholipid linoleoyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5995</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Linoleoyl__45__groups_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16082" name="RXN-16082" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14426_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17332_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16094" name="RXN-16094" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7601 , PWY-6598 , PWY-7725</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__18_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17346_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16095" name="RXN-16095" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7601 , PWY-6598 , PWY-7725</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17346_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17347_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16096" name="RXN-16096" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7725 , PWY-6598 , PWY-7601</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17347_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17348_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16097" name="RXN-16097" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7725 , PWY-6598 , PWY-7601</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17348_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12646_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__161" name="RXN-161" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6583 , PWY-7396 , PWY-6883</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BUTANOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BUTANAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16103" name="RXN-16103" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7727 , PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17312_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17355_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16112" name="RXN-16112" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7728 , PWY-7726</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17324_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17367_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16121" name="RXN-16121" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16185) or (E_subulatus_16189) or (E_subulatus_23912) or (E_subulatus_16187) or (E_subulatus_16184) or (E_subulatus_06616) or (E_subulatus_17376) or (E_subulatus_16186) or (E_subulatus_23911) or (E_subulatus_16188) or (E_subulatus_16190) or (E_subulatus_06615)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6453</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17373_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17375_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16129" name="RXN-16129" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17332_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17382_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16130" name="RXN-16130" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17382_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17383_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16131" name="RXN-16131" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17383_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17331_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16132" name="RXN-16132" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17331_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__17385_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16133" name="3-hydroxyacyl-CoA dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__3__45__HYDROXYACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__KETOACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16134" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07244) or (E_subulatus_11079) or (E_subulatus_07245) or (E_subulatus_07246)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17385_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17386_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16135" name="(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_04057) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17386_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17387_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16136" name="RXN-16136" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17387_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17388_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16137" name="RXN-16137" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7606</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17388_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17312_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16138" name="phospholipase A2" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08800) or (E_subulatus_02033) or (E_subulatus_08799) or (E_subulatus_08798)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-395 , PWY66-397</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17355_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10244_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16139" name="phospholipase A2" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02033) or (E_subulatus_08800) or (E_subulatus_08799) or (E_subulatus_08798)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-394</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17282_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5Z8Z11Z14Z17Z__45__EICOSAPENTAENOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16150" name="lysophospholipid densipoloyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6433</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15365_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17397_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16151" name="RXN-16151" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6433</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15364_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17396_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16152" name="lysophospholipid lesqueroloyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6433</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15366_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17400_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16154" name="RXN-16154" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6433</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17401_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17402_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16157" name="lysophospholipid auricoloyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6433</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15367_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17399_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16158" name="lysophospholipid (11Z)-icosenoyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6433</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__15363_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17404_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16165" name="methionine-tRNA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21925) or (E_subulatus_21928) or (E_subulatus_23075) or (E_subulatus_21926) or (E_subulatus_23077) or (E_subulatus_21927) or (E_subulatus_16674) or (E_subulatus_23078) or (E_subulatus_23079) or (E_subulatus_23076)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRNA-CHARGING-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Initiation__45__tRNAmet_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__methionyl__45__tRNAfmet_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1623" name="RXN-1623" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: TRIGLSYN-PWY , PWY-5667</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Long__45__Chain__45__Acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACYL__45__SN__45__GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__PHOSPHATIDATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16261" name="phosphatidylinositol phospholipase C" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18898) or (E_subulatus_18897)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__1__45__phosphatidyl__45__inositols_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__MYO__45__INOSITOL__45__1__45__MONOPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16322" name="nitronate monooxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10258)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__321_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Unspecified__45__Degradation__45__Products_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONATE__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NITRITE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16380" name="RXN-16380" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5989</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_STEARIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_STEAROYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16389" name="16-hydroxypalmitoyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6733 , PWY-321 , PWY-1121</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_16__45__HYDROXYPALMITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17621_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16393" name="RXN-16393" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DODECANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_LAUROYLCOA__45__CPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16395" name="RXN-16395" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7723</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Long__45__Chain__45__Acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Long__45__Chain__45__Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16401" name="RXN-16401" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6733</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17640_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17641_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16402" name="RXN-16402" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6733</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_18__45__HYDROXYOLEATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17370_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1641" name="RXN-1641" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7416 , TRIGLSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHATIDYLCHOLINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__Lysophosphatidylcholines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Triacylglycerols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16415" name="very-long-chain fatty-acyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Very__45__long__45__chain__45__fatty__45__acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_VERY__45__LONG__45__CHAIN__45__FATTY__45__ACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16418" name="RXN-16418" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1121</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OCTADEC__45__9__45__ENE__45__118__45__DIOIC__45__ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17624_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16425" name="RXN-16425" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07582)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Phosphoacetylglucosamine__45__Mutase__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__6__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Phosphoacetylglucosamine__45__Mutase_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__16__45__BIS__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16426" name="RXN-16426" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07582)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__16__45__BIS__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Phosphoacetylglucosamine__45__Mutase_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Phosphoacetylglucosamine__45__Mutase__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ACETYL__45__D__45__GLUCOSAMINE__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16540" name="RXN-16540" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_21544) or (E_subulatus_23466) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7656 , PWY-7654</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PALMITYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__2117_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16557" name="RXN-16557" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25108) or (E_subulatus_17420) or (E_subulatus_23466) or (E_subulatus_21544) or (E_subulatus_25110) or (E_subulatus_25109)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7656</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__16001_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17813_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16558" name="RXN-16558" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_04057) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19620) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7656</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17813_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17814_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16559" name="RXN-16559" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7656</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17814_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17815_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16561" name="RXN-16561" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7656</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17815_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17464_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16574" name="RXN-16574" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: SULFUROX-PWY , PWY-5285</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17866_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16592" name="RXN-16592" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__5164_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__5164_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16593" name="RXN-16593" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__166_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__166_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16594" name="RXN-16594" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__171_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__171_e" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16602" name="dolichyl phosphate mannosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18188) or (E_subulatus_18187) or (E_subulatus_19866)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7661</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17858_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17894_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16615" name="(5Z)-3-oxo-tetradec-5-enoyl-[acyl-carrier-protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3Z__45__dodec__45__3__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5Z__45__3__45__oxo__45__tetradec__45__5__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16616" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5Z__45__3__45__oxo__45__tetradec__45__5__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3R__45__5Z__45__3__45__hydroxy__45__tetradec__45__5__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16619" name="(3R,5Z)-3-hydroxy-tetradeca-5-enoyl-[acp] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3R__45__5Z__45__3__45__hydroxy__45__tetradec__45__5__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2E__45__5Z__45__tetradeca__45__2__45__5__45__dienoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16620" name="(2E,5Z)-tetradeca-2,5-dienoyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2E__45__5Z__45__tetradeca__45__2__45__5__45__dienoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5Z__45__tetradec__45__5__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16621" name="(7Z)-3-oxo-hexadec-7-enoyl-[acp] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5Z__45__tetradec__45__5__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_7Z__45__3__45__oxo__45__hexadec__45__7__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16622" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_7Z__45__3__45__oxo__45__hexadec__45__7__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3R__45__7Z__45__3__45__hydroxy__45__hexadec__45__7__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16623" name="(3R,7Z)-3-hydroxy-hexadec-7-enoyl-[acp] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3R__45__7Z__45__3__45__hydroxy__45__hexadec__45__7__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2E__45__7Z__45__hexadeca__45__2__45__7__45__dienoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16624" name="(2E,7Z)-hexadeca-2,7-dienoyl-[acp]" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2E__45__7Z__45__hexadeca__45__2__45__7__45__dienoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_7Z__45__hexadec__45__7__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16625" name="(9Z)-3-oxo-octadec-9-enoyl-[acp] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_7Z__45__hexadec__45__7__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_9Z__45__3__45__oxo__45__octadec__45__9__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16626" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_9Z__45__3__45__oxo__45__octadec__45__9__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3R__45__9Z__45__3__45__hydroxy__45__octadec__45__9__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16627" name="(3R,9Z)-3-hydroxy-octadec-9-enoyl-[acp] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3R__45__9Z__45__3__45__hydroxy__45__octadec__45__9__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2E__45__9Z__45__octadeca__45__2__45__9__45__dienoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16628" name="(2E,9Z)-octadeca-2,9-dienoyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7664</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2E__45__9Z__45__octadeca__45__2__45__9__45__dienoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oleoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16629" name="(11Z)-3-oxo-icos-11-enoyl-[acp] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7663</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oleoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_11Z__45__3__45__oxo__45__icos__45__11__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16630" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7663</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_11Z__45__3__45__oxo__45__icos__45__11__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3R__45__11Z__45__3__45__hydroxy__45__icos__45__11__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16631" name="(3R,11Z)-3-hydroxy-icos-11-enoyl-[acp] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7663</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3R__45__11Z__45__3__45__hydroxy__45__icos__45__11__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2E__45__11Z__45__icosa__45__2__45__11__45__dienoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16632" name="(2E,11Z)-icosa-2,11-dienoyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7663</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2E__45__11Z__45__icosa__45__2__45__11__45__dienoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_11Z__45__icos__45__11__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16634" name="galactolipid galactosyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01840) or (E_subulatus_10302) or (E_subulatus_18292) or (E_subulatus_17738) or (E_subulatus_14739) or (E_subulatus_09153) or (E_subulatus_01839) or (E_subulatus_14738) or (E_subulatus_18293) or (E_subulatus_09152)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10363_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__Galactosyl__45__12__45__diacyl__45__glycerols_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10364_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16635" name="galactolipid galactosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01840) or (E_subulatus_10302) or (E_subulatus_18292) or (E_subulatus_17738) or (E_subulatus_14739) or (E_subulatus_09153) or (E_subulatus_01839) or (E_subulatus_14738) or (E_subulatus_18293) or (E_subulatus_09152)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-401</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__Galactosyl__45__12__45__diacyl__45__glycerols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10364_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Tetragalactosyldiacylglycerol_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16637" name="aminoacyl-tRNA hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21087) or (E_subulatus_02644) or (E_subulatus_21090) or (E_subulatus_04210) or (E_subulatus_02642) or (E_subulatus_02643) or (E_subulatus_04209) or (E_subulatus_21088) or (E_subulatus_21089)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6308</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Charged__45__CYS__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYS__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16653" name="decanal dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_18015) or (E_subulatus_03415) or (E_subulatus_00192) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__8490_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__3617_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16654" name="dodecanal dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_03414) or (E_subulatus_00192) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__7880_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_DODECANOATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16655" name="hexadecanal dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_00192) or (E_subulatus_03414) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PALMITALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PALMITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16656" name="(2E)-hexadecenal dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_00192) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY3DJ-11470</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__292_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9768_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16759" name="holo-[acyl-carrier-protein] synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01014) or (E_subulatus_12579) or (E_subulatus_01013) or (E_subulatus_17853) or (E_subulatus_12578) or (E_subulatus_12580) or (E_subulatus_12581) or (E_subulatus_12582)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LYS2__45__peptidyl__45__carrier__45__protein_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Holo__45__LYS2__45__peptidyl__45__carrier__45__protein_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16765" name="RXN-16765" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18085_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16909" name="hydrogen carbonate phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11887) or (E_subulatus_11884) or (E_subulatus_22040) or (E_subulatus_22039) or (E_subulatus_11886) or (E_subulatus_11885) or (E_subulatus_11888)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7693</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18238_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16910" name="carboxyphosphate aminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11887) or (E_subulatus_11884) or (E_subulatus_22040) or (E_subulatus_22039) or (E_subulatus_11886) or (E_subulatus_11885) or (E_subulatus_11888)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7693</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__18238_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBAMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16975" name="RXN-16975" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09669) or (E_subulatus_09668)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ERGOSTEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__11602_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16997" name="RXN-16997" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09988) or (E_subulatus_07640) or (E_subulatus_07582) or (E_subulatus_07641) or (E_subulatus_20820) or (E_subulatus_19055) or (E_subulatus_07638) or (E_subulatus_14108) or (E_subulatus_20819) or (E_subulatus_20343) or (E_subulatus_20821) or (E_subulatus_18333) or (E_subulatus_07639) or (E_subulatus_20822) or (E_subulatus_20823) or (E_subulatus_20342) or (E_subulatus_14109) or (E_subulatus_17206) or (E_subulatus_07642) or (E_subulatus_20824)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Phosphorylated__45__phosphoglucomutase_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ALPHA__45__GLUCOSE__45__16__45__BISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Phosphoglucomutase_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__16998" name="RXN-16998" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09988) or (E_subulatus_07640) or (E_subulatus_07582) or (E_subulatus_07641) or (E_subulatus_20820) or (E_subulatus_19055) or (E_subulatus_07638) or (E_subulatus_14108) or (E_subulatus_20819) or (E_subulatus_20343) or (E_subulatus_20821) or (E_subulatus_18333) or (E_subulatus_07639) or (E_subulatus_20822) or (E_subulatus_20823) or (E_subulatus_20342) or (E_subulatus_14109) or (E_subulatus_17206) or (E_subulatus_07642) or (E_subulatus_20824)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ALPHA__45__GLUCOSE__45__16__45__BISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Phosphoglucomutase_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__glucopyranose__45__6__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Phosphorylated__45__phosphoglucomutase_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__171" name="RXN-171" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-102</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__134_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__482_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17105" name="RXN-17105" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>SUBSYSTEM: PWY-7725</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__12646_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14407_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17107" name="long-chain acyl-protein thioester reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12178) or (E_subulatus_12411) or (E_subulatus_12412) or (E_subulatus_12410)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7723</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LuxE__45__long__45__chain__45__fatty__45__acyl__45__L__45__cysteine_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Long__45__Chain__45__Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Acyl__45__protein__45__synthetase_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17109" name="RXN-17109" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7726</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__17329_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__18489_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17113" name="acyl-CoA oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07244) or (E_subulatus_07245) or (E_subulatus_07246) or (E_subulatus_11079)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7726</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__18491_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18492_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17114" name="(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19621) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7726</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__18492_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18493_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17115" name="RXN-17115" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7726</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__18493_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__18494_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17116" name="RXN-17116" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7726</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__18494_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__17365_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17130" name="L-amino-acid oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17393) or (E_subulatus_17392)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHENYL__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17155" name="RXN-17155" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft810_12a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7735</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__18550_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_QXC__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17203" name="galactosylceramide sulfotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07829) or (E_subulatus_24119) or (E_subulatus_04081) or (E_subulatus_07830) or (E_subulatus_14819) or (E_subulatus_19052) or (E_subulatus_00904) or (E_subulatus_19053) or (E_subulatus_02794) or (E_subulatus_04083) or (E_subulatus_01999) or (E_subulatus_04086) or (E_subulatus_04088) or (E_subulatus_16624) or (E_subulatus_07602) or (E_subulatus_07828) or (E_subulatus_25735) or (E_subulatus_19919) or (E_subulatus_04085) or (E_subulatus_04087) or (E_subulatus_24118) or (E_subulatus_04084) or (E_subulatus_06073) or (E_subulatus_05887) or (E_subulatus_16625) or (E_subulatus_04089) or (E_subulatus_01998) or (E_subulatus_04080) or (E_subulatus_00905) or (E_subulatus_05888) or (E_subulatus_04082)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__Alkyl__45__2__45__acyl__45__3D__45__galactosyl__45__sn__45__glycerol_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Seminolipids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17352" name="peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01446) or (E_subulatus_02016) or (E_subulatus_25320) or (E_subulatus_16649) or (E_subulatus_08105) or (E_subulatus_00420) or (E_subulatus_16650) or (E_subulatus_08107) or (E_subulatus_20015) or (E_subulatus_18334) or (E_subulatus_21986) or (E_subulatus_13034) or (E_subulatus_10790) or (E_subulatus_08798) or (E_subulatus_04125) or (E_subulatus_08800) or (E_subulatus_05686) or (E_subulatus_04126) or (E_subulatus_05281) or (E_subulatus_22471) or (E_subulatus_08456) or (E_subulatus_08513) or (E_subulatus_20011) or (E_subulatus_21987) or (E_subulatus_10127) or (E_subulatus_20014) or (E_subulatus_08106) or (E_subulatus_13035) or (E_subulatus_05687) or (E_subulatus_23617) or (E_subulatus_17484) or (E_subulatus_20013) or (E_subulatus_08455) or (E_subulatus_07826) or (E_subulatus_20012) or (E_subulatus_15057) or (E_subulatus_01447) or (E_subulatus_21225) or (E_subulatus_03379) or (E_subulatus_08799) or (E_subulatus_23616) or (E_subulatus_02015) or (E_subulatus_04124) or (E_subulatus_13544) or (E_subulatus_13036) or (E_subulatus_25319) or (E_subulatus_11753) or (E_subulatus_00421) or (E_subulatus_02233) or (E_subulatus_13545) or (E_subulatus_05280)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6824 , PWY-5469 , PWY-5466</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CONIFERYL__45__ALCOHOL_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18761_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17472" name="RXN-17472" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02357)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Sulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DETHIOBIOTIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Unsulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5662_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CH33ADO_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__2Fe__45__2S__45__Ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17473" name="RXN-17473" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02357)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5662_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BIOTIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CH33ADO_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17475" name="RXN-17475" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_13807) or (E_subulatus_13805) or (E_subulatus_04056) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_04057) or (E_subulatus_19620) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cis__45__2__45__enoyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_D__45__3__45__HYDROXYACYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17573" name="RXN-17573" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14925) or (E_subulatus_14923) or (E_subulatus_14924) or (E_subulatus_18294) or (E_subulatus_18225) or (E_subulatus_01843) or (E_subulatus_14926)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CAAX__45__proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FARNESYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Farnesylated__45__CAAX__45__proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17589" name="1,2-epoxy-2-methylpropane hydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14205)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7778</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19010_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19013_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17617" name="RXN-17617" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14205)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_12__45__EPOXYPROPANE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DL__45__12__45__Propanediol_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17622" name="RXN-17622" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft339_3a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_12__45__EPOXYPROPANE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DL__45__12__45__Propanediol_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17631" name="RXN-17631" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYL__45__GLYOXAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Protein__45__Lysine__45__Aminocarbinol_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17679" name="RXN-17679" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15024) or (E_subulatus_19163) or (E_subulatus_15023)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2R__45__3R__45__Dihydroflavonols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Flavonols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17688" name="RXN-17688" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7053</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__17282_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14018_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17730" name="2-acyl-1-alkyl-sn-glycerol 3-phosphate phosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16185) or (E_subulatus_16189) or (E_subulatus_23912) or (E_subulatus_16187) or (E_subulatus_16184) or (E_subulatus_06616) or (E_subulatus_17376) or (E_subulatus_16186) or (E_subulatus_23911) or (E_subulatus_16188) or (E_subulatus_16190) or (E_subulatus_06615)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7782</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__Alkyl__45__2__45__acyl__45__glycerol__45__3__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__Alkyl__45__2__45__acyl__45__glycerol_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17735" name="plasmenylethanolamine 2-acylhydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02033) or (E_subulatus_08800) or (E_subulatus_08799) or (E_subulatus_08798)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7783</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Alkyl__45__enyl__45__acyl__45__gly__45__P__45__EtOH__45__amines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_1__45__Alkenylglycerophosphoethanolamines_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17736" name="phosphatidylcholine 2-acylhydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02033) or (E_subulatus_08800) or (E_subulatus_08799) or (E_subulatus_08798)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7783</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PLASMENYLCHOLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__563_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17753" name="RXN-17753" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CARBAMOYL__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__69_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17758" name="RXN-17758" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_BETAINE_ALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CHOLINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17776" name="enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_04057) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19172_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19171_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17777" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19171_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19169_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17778" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19169_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19144_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17780" name="enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13807) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_19350) or (E_subulatus_19620) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19170_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19168_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17781" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19168_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19167_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17782" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19167_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15436_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17785" name="enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19163_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19159_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17786" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19159_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19160_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17787" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19160_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10269_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17789" name="enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13807) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_19620) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19162_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19155_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17790" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19155_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19158_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17791" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19158_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19147_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17793" name="enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13807) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_04057) or (E_subulatus_19620) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19161_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19154_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17794" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19154_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19157_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17795" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19157_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19148_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17797" name="enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_04057) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19150_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19151_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17798" name="3-hydroxyacyl-CoA dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19151_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19153_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__17799" name="3-ketoacyl-CoA thiolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06624) or (E_subulatus_19620) or (E_subulatus_19621) or (E_subulatus_19622)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__19153_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14925_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1826" name="1,4-a-D-glucan:phosphate a-D-glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Long__45__linear__45__glucans_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Long__45__linear__45__glucans_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__1884" name="RXN-1884" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02184) or (E_subulatus_21929) or (E_subulatus_19528) or (E_subulatus_17427) or (E_subulatus_01587)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-882</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__Galactopyranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__330_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2001" name="RXN-2001" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21143)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6457</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__674_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CINNAMOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2006" name="RXN-2006" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23204)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6458 , PWY-481 , P281-PWY , PWY-6443</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__514_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BENZOYLCOA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__21829" name="RXN-21829" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuFWS13301_2 and EsuFWS8841_2)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYCLOARTENOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="6" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="5" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__23708_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="6" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="4" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__21830" name="RXN-21830" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (CAB1107767.1 and CACKRE030002836.1)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-8191</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__23708_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__23709_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__21831" name="RXN-21831" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-8191</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__23709_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__12850_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__22" name="canavaninosuccinate lyase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05554)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CANAVANINOSUCCINATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CANAVANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__22198" name="RXN-22198" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuFWS166_11)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-8238</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__24185_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__22095_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__22206" name="RXN-22206" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuFWS91_14)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-8238</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__24184_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__24185_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2221" name="3-methylthiopropyl glucosinolate S-oxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08772)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1187</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__METHYLTHIOPROPYL__45__GLUCOSINOLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__METHYLSULFINYLPROPYL__45__GLUCOSINOLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2425" name="2,3-dehydroadipyl-CoA hydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13805) or (E_subulatus_02116) or (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13807) or (E_subulatus_13806) or (E_subulatus_04057) or (E_subulatus_20645) or (E_subulatus_19621) or (E_subulatus_19350) or (E_subulatus_19620) or (E_subulatus_19622) or (E_subulatus_20644)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1361 , PWY0-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__HYDROXYADIPYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_TRANS__45__23__45__DEHYDROADIPYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2541" name="RXN-2541" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1250_2a) or (E_subulatus_02597)</p>
            <p>CATEGORIES: ORTHOLOGY and MANUAL</p>
            <p>SUBSYSTEM: PWY-1422</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HOMOGENTISATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHYTYL__45__PYROPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MPBQ_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2542" name="2-methyl-6-phytyl-1,4-benzoquinone methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21246)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1422</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MPBQ_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DMPBQ_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2543" name="RXN-2543" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-1422</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DMPBQ_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GAMA__45__TOCOPHEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2561" name="RXN-2561" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-1422</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MPBQ_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DELTA__45__TOCOPHEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2562" name="RXN-2562" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25654) or (EsuBft981_2a)</p>
            <p>CATEGORIES: ORTHOLOGY and MANUAL</p>
            <p>SUBSYSTEM: PWY-1422</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DELTA__45__TOCOPHEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BETA__45__TOCOPHEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2881" name="RXN-2881" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-1622</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2902" name="malonate semialdehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25404)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: P562-PWY , BETA-ALA-DEGRADATION-I-PWY , PWY-1781 , PWY-7574</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONATE__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2961" name="RXN-2961" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-1801</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__HYDROXYMETHYLGLUTATHIONE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__2962" name="S-(hydroxymethyl)glutathione dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20114) or (E_subulatus_20113) or (E_subulatus_20115) or (E_subulatus_20116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1801</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__HYDROXYMETHYLGLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__548_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__3142" name="RXN-3142" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17252)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY1F-FLAVSYN</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_P__45__COUMAROYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="4" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__3041_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="4" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__3221" name="chalcone isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12873) or (E_subulatus_16597)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6325 , PWY-2002</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__3041_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__3061_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__3341" name="RXN-3341" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: RUMP-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__2961_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RIBULOSE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__34" name="arginase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03337)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-31</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CANAVANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__CANALINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UREA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__3443" name="NAD+-dependent glyceraldehyde-3-phosphate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_00192) or (E_subulatus_18015) or (E_subulatus_03414) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2221</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_G3P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__3521" name="L-ascorbate peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16649) or (E_subulatus_04126) or (E_subulatus_17484) or (E_subulatus_04124) or (E_subulatus_16650) or (E_subulatus_08513) or (E_subulatus_04125)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__318_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__3523" name="RXN-3523" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6370 , PWY-2261</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__318_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DEHYDRO__45__ASCORBATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__3661" name="RXN-3661" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882) or (E_subulatus_15408) or (E_subulatus_00193)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5640</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BENZENE__45__NO2_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CATECHOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NITRITE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__37" name="4-acetamidobutanal dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_00192) or (E_subulatus_03414) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-0</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__30_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__35_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__3701" name="geranylgeranyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03064) or (E_subulatus_15138) or (E_subulatus_03061) or (E_subulatus_17281) or (E_subulatus_03063) or (E_subulatus_03062)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GERANYLGERANYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CAAL__45__proteins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Geranylgeranylated__45__CAAL__45__proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4021" name="sterol methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18134) or (E_subulatus_18116)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2541 , PWY-7155</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYCLOARTENOL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__696_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4142" name="fatty aldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_18015) or (E_subulatus_03415) or (E_subulatus_00192) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2724 , PWY-2501</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Fatty__45__Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4144" name="4&amp;alpha;-methyl-5&amp;alpha;-ergosta-8,14,24(28)-trien-3&amp;beta;-ol &amp;Delta;14 reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03325)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2541</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ALPHA__45__METHYL__45__5__45__ALPHA__45__ERGOSTA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4081_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4161" name="cholestenol delta-isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02274)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2541</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__4081_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4101_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4209" name="RXN-4209" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23561)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2541</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__4125_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4126_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4225" name="RXN-4225" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2582</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__707_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__3943_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4231" name="RXN-4231" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2582</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__698_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__3945_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4303" name="RXN-4303" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15099)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2681</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__4211_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4201_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4305" name="RXN-4305" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15099)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2681</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__4211_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4203_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4726" name="RXN-4726" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03526)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2902</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__332_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__4617_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4733" name="RXN-4733" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03526)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2881</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__4441_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__4618_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4821" name="RXN-4821" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-2942</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DELTA1__45__PIPERIDEINE__45__2__45__6__45__DICARBOXYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__ALPHA__45__AMINO__45__EPSILON__45__KETO__45__PIMELATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__4941" name="RXN-4941" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6369</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1107_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIPHOSPHO__45__1D__45__MYO__45__INOSITOL__45__TETRAKISPHOSPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5061" name="RXN-5061" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: CODH-PWY , PWY-2201</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__METHYL__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5109" name="(E)-beta-ocimene synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01092) or (E_subulatus_24029) or (E_subulatus_01091) or (E_subulatus_01093)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3041</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GERANYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4889_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5110" name="myrcene synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01092) or (E_subulatus_24029) or (E_subulatus_01091) or (E_subulatus_01093)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7410 , PWY-3041 , PWY-5423</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GERANYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4888_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5181" name="L-2-aminoadipate N-acetyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24809)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__468_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N2__45__ACETYL__45__ALPHA__45__AMIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__527" name="quercetin synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15024) or (E_subulatus_19163) or (E_subulatus_15023) or (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6787 , PWY-5390 , PWY-3101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__474_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__520_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5285" name="3,8-divinyl-protochlorophyllide oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02690)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: CHLOROPHYLL-SYN</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIVINYL__45__PROTOCHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Light_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIVINYLCHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5462" name="GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24765)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ALPHA__45__D__45__MANNOSYLCHITOBIO_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5161_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5463" name="RXN-5463" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5161_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__5162_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5464" name="RXN-5464" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__5162_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP__45__MANNOSE_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GDP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__5164_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5466" name="RXN-5466" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__5164_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__171_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5165_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5467" name="RXN-5467" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__5165_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__171_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5166_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5468" name="RXN-5468" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__5166_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__171_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__5167_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5469" name="RXN-5469" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__5167_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__171_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5168_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5470" name="RXN-5470" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__166_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5168_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__5169_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5471" name="RXN-5471" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__166_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5169_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__5170_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5472" name="dolichyl-P-Glc:Glc2Man9GlcNAc2-PP-dolichol &amp;alpha;-1,2-glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14458)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__5170_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__166_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DOLICHOLP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__18076_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5482" name="UDP-L-rhamnose synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18893) or (E_subulatus_02254) or (E_subulatus_18894)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP__45__L__45__RHAMNOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5581" name="RXN-5581" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23526)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3162</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_INDOLE_ACETALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INDOLE_ACETATE_AUXIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5641" name="RXN-5641" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-3385 , PWY4FS-6 , PWY-7782</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETHANOL__45__AMINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5642" name="phosphomethylethanolamine N-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03930) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3385 , PWY4FS-4 , PWY4FS-2</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__406_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5441_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5647" name="phosphocholine phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16971)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3385</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHORYL__45__CHOLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CHOLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5721" name="RXN-5721" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5653</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__AMINO__45__3__45__3__45__OXOPROP__45__2__45__ENYL__45__BUT__45__2__45__ENEDI_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_QUINOLINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5821" name="RXN-5821" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19482)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6802 , PWY-7431</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TYRAMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDRPHENYLAC__45__CPD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5822" name="acid phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24710) or (E_subulatus_01143) or (E_subulatus_24579) or (E_subulatus_04656) or (E_subulatus_08878) or (E_subulatus_20190) or (E_subulatus_09245) or (E_subulatus_24578) or (E_subulatus_18108) or (E_subulatus_20191) or (E_subulatus_23099) or (E_subulatus_09244) or (E_subulatus_01144) or (E_subulatus_01145) or (E_subulatus_21678) or (E_subulatus_22769) or (E_subulatus_24580) or (E_subulatus_03152) or (E_subulatus_09246) or (E_subulatus_18109)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: NADPHOS-DEPHOS-PWY , NAD-BIOSYNTHESIS-II , PWY-5083</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5841" name="5&apos;-nucleotidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13217) or (E_subulatus_17313) or (E_subulatus_02463) or (E_subulatus_02465) or (E_subulatus_17477) or (E_subulatus_10902) or (E_subulatus_10901) or (E_subulatus_17314) or (E_subulatus_02464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: NAD-BIOSYNTHESIS-II , PWY-5381</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NICOTINAMIDE_NUCLEOTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NICOTINAMIDE_RIBOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5861" name="L-tyrosinase monooxygenase (membrane-bound)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04816) or (E_subulatus_07983) or (E_subulatus_00885) or (E_subulatus_03621) or (E_subulatus_20787) or (E_subulatus_10375) or (E_subulatus_04818) or (E_subulatus_08208) or (E_subulatus_10196) or (E_subulatus_10195) or (E_subulatus_18153) or (E_subulatus_11644) or (E_subulatus_00884) or (E_subulatus_07399) or (E_subulatus_09951) or (E_subulatus_15328) or (E_subulatus_09948) or (E_subulatus_13795) or (E_subulatus_02578) or (E_subulatus_08206) or (E_subulatus_15819) or (E_subulatus_03619) or (E_subulatus_16728) or (E_subulatus_09950) or (E_subulatus_02228) or (E_subulatus_13421) or (E_subulatus_07400) or (E_subulatus_13422) or (E_subulatus_15381) or (E_subulatus_03620) or (E_subulatus_17576) or (E_subulatus_18484) or (E_subulatus_09947) or (E_subulatus_04817) or (E_subulatus_08210) or (E_subulatus_15820) or (E_subulatus_02227) or (E_subulatus_00478) or (E_subulatus_02579) or (E_subulatus_08207) or (E_subulatus_07984) or (E_subulatus_18154) or (E_subulatus_15380) or (E_subulatus_23779) or (E_subulatus_17575) or (E_subulatus_09949) or (E_subulatus_18759) or (E_subulatus_08209) or (E_subulatus_10289)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5399 , PWY-6133 , PWY-6955 , PWY-3581</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TYR_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__DIHYDROXY__45__PHENYLALANINE_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5901" name="acetoacetyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21115)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5741 , PWY1-3 , PWY-5676 , PWY-7216</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETOACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__650_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__5962" name="zeinoxanthin epsilon hydroxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09125) or (E_subulatus_09124)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5947</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5661_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__119_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__600" name="RXN-600" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14571) or (E_subulatus_03281) or (E_subulatus_08480)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY1F-823</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__474_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__590_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6002" name="RXN-6002" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft807_9a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-3641</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__16618_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_MAL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__602" name="RXN-602" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__590_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__19726_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6081" name="RXN-6081" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6389 , PWY-5938</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__ACETO__45__LACTATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACETYL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6201" name="2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07118)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7849 , PWY-5691 , PWY-7394</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__5821_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_S__45__ALLANTOIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6268" name="RXN-6268" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY1F-353 , PWY-7494</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BETAINE__45__ALDEHYDE__45__HYDRATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BETAINE_ALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6381" name="diamine oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11639) or (E_subulatus_19483) or (E_subulatus_14646) or (E_subulatus_19482) or (E_subulatus_13120) or (E_subulatus_14645) or (E_subulatus_11640) or (E_subulatus_14644)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-3981</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__313_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__6082_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6382" name="RXN-6382" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23526)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-3981 , PWY-5760</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__6082_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_B__45__ALANINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6383" name="3-hydroxypropionyl-CoA dehydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13805) or (E_subulatus_02116) or (E_subulatus_13806) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5744 , PWY-5789 , PWY-5743 , PWY-3941 , PWY-7574</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__HYDROXY__45__PROPIONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACRYLYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6423" name="RXN-6423" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6440 , PWY-2</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_4__45__AMINO__45__BUTYRALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__6124_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__646" name="RXN-646" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22319)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6993 , PWY-722 , PWY-5033 , PWY-7128</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALEAMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MALEATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6550" name="RXN-6550" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-102</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__137_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__6224_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6601" name="obsolete gamma-glutamyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06213) or (E_subulatus_10761)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4041</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Amino__45__Acids__45__20_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__L__45__GLUTAMYL__45__L__45__AMINO__45__ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYS__45__GLY_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6622" name="RXN-6622" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07550)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-4041 , PWY-7559</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS__45__GLY_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__6723" name="2-phytyl-1,4-naphthoquinone methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03930) or (E_subulatus_03931) or (E_subulatus_03932) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY18C3-22 , PWY-4203</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__110_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__6442_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__701" name="RXN-701" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PAPS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__5__45__ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__707" name="sterol delta7 reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05479) or (E_subulatus_05481) or (E_subulatus_05480)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2541</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__700_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__706_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7101" name="RXN-7101" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY0-1264</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BCCP__45__biotin__45__monomers_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BCCP__45__dimers_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__711" name="RXN-711" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21740)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-699 , PWY-2582</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__698_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__709_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__715" name="RXN-715" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-699</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__713_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__714_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7163" name="inositol pentakisphosphate 2-kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08588)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6554 , PWY-6372 , PWY-4661 , PWY-6361 , PWY-6369 , PWY-6362</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__1107_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MI__45__HEXAKISPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7253" name="inositol monophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22024) or (E_subulatus_14942) or (E_subulatus_18485) or (E_subulatus_01396) or (E_subulatus_22023) or (E_subulatus_01398) or (E_subulatus_22025) or (E_subulatus_19762) or (E_subulatus_01397) or (E_subulatus_14670) or (E_subulatus_22022) or (E_subulatus_04574)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4702</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__6746_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7569" name="demethylphylloquinol methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03930) or (E_subulatus_03931) or (E_subulatus_03932) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5027</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12830_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12831_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7571" name="histidine-pyruvate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20406)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5031</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HIS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_IMIDAZOLE__45__PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7605" name="RXN-7605" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6153 , PWY-6154 , METHIONINE-DEG1-PWY , PWY-6151 , PWY-5041</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Demethylated__45__methyl__45__acceptors_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Methylated__45__methyl__45__acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7607" name="5&apos;-nucleotidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13217) or (E_subulatus_17313) or (E_subulatus_02463) or (E_subulatus_02465) or (E_subulatus_17477) or (E_subulatus_10902) or (E_subulatus_10901) or (E_subulatus_17314) or (E_subulatus_02464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6596</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_IMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_INOSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7609" name="5&apos;-nucleotidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13217) or (E_subulatus_17313) or (E_subulatus_02463) or (E_subulatus_02465) or (E_subulatus_17477) or (E_subulatus_10902) or (E_subulatus_10901) or (E_subulatus_17314) or (E_subulatus_02464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6607 , PWY-6606 , PWY-6608</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GUANOSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7644" name="D-sorbitol 2-dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13923) or (E_subulatus_13920) or (E_subulatus_13922) or (E_subulatus_13921)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SORBITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15382_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7645" name="RXN-7645" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09952) or (E_subulatus_24492) or (E_subulatus_23341)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5059</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_CINNAMOYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__6993_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="4" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="3" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7647" name="chalcone isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12873) or (E_subulatus_16597)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5059</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__6993_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__6991_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7648" name="RXN-7648" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5059</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__6991_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__6992_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7663" name="chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18436)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5064</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GERANYLGERANYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7005_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7673" name="chlorophyllide b:geranyl-geranyl diphosphate geranyl-geranyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18436)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__7014_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_GERANYLGERANYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7013_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7674" name="chlorophyllide-b:phytyl-diphosphate phytyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18436)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5068</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__7014_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PHYTYL__45__PYROPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CHLOROPHYLL__45__B_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7676" name="chlorophyllide-a monooxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14078) or (E_subulatus_12890) or (E_subulatus_20083) or (E_subulatus_16615) or (E_subulatus_16614) or (E_subulatus_12888) or (E_subulatus_06698) or (E_subulatus_03342) or (E_subulatus_16061) or (E_subulatus_14079) or (E_subulatus_12889) or (E_subulatus_15638) or (E_subulatus_15639) or (E_subulatus_03343) or (E_subulatus_07455) or (E_subulatus_07456)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5068</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7015_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7677" name="71-hydroxychlorophyllide a monooxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14078) or (E_subulatus_12890) or (E_subulatus_20083) or (E_subulatus_16615) or (E_subulatus_12888) or (E_subulatus_16614) or (E_subulatus_06698) or (E_subulatus_03342) or (E_subulatus_16061) or (E_subulatus_14079) or (E_subulatus_12889) or (E_subulatus_15638) or (E_subulatus_15639) or (E_subulatus_03343) or (E_subulatus_07455) or (E_subulatus_07456)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5068</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7015_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__19759_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7682" name="hypoxanthine hydroxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00870) or (E_subulatus_07434) or (E_subulatus_07435) or (E_subulatus_07436) or (E_subulatus_09063) or (E_subulatus_09064)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6596 , SALVADEHYPOX-PWY , P164-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HYPOXANTHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_XANTHINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7697" name="RXN-7697" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5080</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Very__45__long__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Very__45__Long__45__Chain__45__oxoacyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7698" name="acetoacetyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21115)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5080</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Very__45__Long__45__Chain__45__oxoacyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Very__45__Long__45__Chain__45__3__45__Hydroxyacyl__45__CoAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7711" name="RXN-7711" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5080</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Very__45__Long__45__Chain__45__Trans__45__23__45__Dehydroacyl__45__CoA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Very__45__long__45__Chain__45__234__45__Saturated__45__acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7716" name="dihydrolipoate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04353) or (E_subulatus_04354) or (E_subulatus_01830) or (E_subulatus_01831)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5084</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxo__45__glutarate__45__dehydrogenase__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxo__45__glutarate__45__dehydrogenase__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7719" name="dihydrolipoamide dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04354) or (E_subulatus_14800) or (E_subulatus_04353) or (E_subulatus_01830) or (E_subulatus_01831)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5046</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BCAA__45__dehydrogenase__45__lipoyl_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__773" name="RXN-773" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-699 , PWY-2582</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__710_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__712_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7737" name="L,L-diaminopimelate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16325)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5097</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LL__45__DIAMINOPIMELATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DELTA1__45__PIPERIDEINE__45__2__45__6__45__DICARBOXYLATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7745" name="RXN-7745" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24609)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__7066_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__OXOBUTANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7775" name="RXN-7775" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY1F-823 , PWY-6787</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__6994_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__474_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7784" name="RXN-7784" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14571) or (E_subulatus_03281) or (E_subulatus_08480)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5152</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__7087_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7088_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7792" name="RXN-7792" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5129</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13612_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Long__45__Chain__45__Acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD3DJ__45__82_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7800" name="RXN-7800" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6871 , LEUSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7100_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2K__45__4CH3__45__PENTANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7828" name="RXN-7828" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03526) or (E_subulatus_03377)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5268 , PWY-5139</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PELARGONIDIN__45__3__45__GLUCOSIDE__45__CMPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7137_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7835" name="2,4-dienoyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01876) or (E_subulatus_12766)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5138</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__trans__45__4__45__cis__45__dienoyl__45__CoAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Trans__45__3__45__enoyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7904" name="acyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6803 , PWY-5143 , PWY-6873 , PWY-5885 , PWY-7033</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Long__45__Chain__45__Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Long__45__Chain__45__Acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7908" name="4-alpha-hydroxytetrahydrobiopterin dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08470) or (E_subulatus_08471) or (E_subulatus_08469) or (E_subulatus_09706)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PHENYLALANINE-DEG1-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__5881_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14202_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7911" name="2,4-dienoyl-CoA reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01876) or (E_subulatus_12766)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TETRADEHYDROACYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_TRANS__45__D2__45__ENOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7913" name="dCMP kinase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19892) or (E_subulatus_13577) or (E_subulatus_19893) or (E_subulatus_03631) or (E_subulatus_13578) or (E_subulatus_19894) or (E_subulatus_13579) or (E_subulatus_13580)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7197</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DCMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DCDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7919" name="RXN-7919" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22822) or (E_subulatus_06892) or (E_subulatus_02795) or (E_subulatus_06890) or (E_subulatus_02797) or (E_subulatus_06891) or (E_subulatus_05989) or (E_subulatus_02796)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__hydroxyacyl__45__glutathiones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__Hydroxy__45__carboxylates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7922" name="RXN-7922" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5152</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__7214_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7087_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7948" name="phosphoryl-ethanolamine phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16971)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHORYL__45__ETHANOLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETHANOL__45__AMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7967" name="shikimate 3-dehydrogenase (NADP+)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21777)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_QUINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DEHYDROQUINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7968" name="shikimate 3-dehydrogenase (NADP+)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21777)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6163</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SHIKIMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__DEHYDRO__45__SHIKIMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7984" name="violaxanthin de-epoxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13384)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5945</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__133_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__DEHYDRO__45__ASCORBATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__131_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__7985" name="violaxanthin de-epoxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13384)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5945</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__131_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ASCORBATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__130_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DEHYDRO__45__ASCORBATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8001" name="histidinol dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12595)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HISTIDINOL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HIS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8028" name="RXN-8028" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04592)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5175</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__115_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7414_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8032" name="3-ketopimelyl-CoA thiolase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24809)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: CENTBENZCOA-PWY , PWY-7401 , P321-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__OXOPIMELOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTARYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8036" name="RXN-8036" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00876) or (E_subulatus_14035)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5176</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__7417_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7418_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8038" name="RXN-8038" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882) or (E_subulatus_04592) or (E_subulatus_15408) or (E_subulatus_00193)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NEUROSPORENE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7419_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8040" name="RXN-8040" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882) or (E_subulatus_04592) or (E_subulatus_15408) or (E_subulatus_00193)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NEUROSPORENE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7422_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8096" name="methanol-specific methylcobalamin:coenzyme M methyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03930) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: CO2FORM-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYL__45__MTAC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CoM_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Me__45__CoM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MTAC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8098" name="monomethylamine methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03930) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5247</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MtmC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHYLAMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Methylated__45__MtmC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8099" name="methylamine-specific methylcobalamin:coenzyme M methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03930) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5247</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Methylated__45__MtmC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CoM_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MtmC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Me__45__CoM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8100" name="dimethylamine methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03930) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5248</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MtbC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIMETHYLAMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Methylated__45__MtbC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_METHYLAMINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8101" name="methylamine-specific methylcobalamin:coenzyme M methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03930) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5248</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Methylated__45__MtbC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CoM_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Me__45__CoM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MtbC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8102" name="trimethylamine methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03930) or (E_subulatus_03931) or (E_subulatus_03932) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TRIMETHYLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MttC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Methylated__45__MttC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIMETHYLAMINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8103" name="methylamine-specific methylcobalamin:coenzyme M methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03930) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5250</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Methylated__45__MttC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CoM_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MttC__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Me__45__CoM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8172" name="RXN-8172" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5311 , PWY66-425 , PWY-5283</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETO__45__6__45__AMINO__45__CAPROATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DELTA1__45__PIPERIDEINE__45__2__45__CARBOXYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8228" name="delphinidin 3-O-glucoside 5-O-glucosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03526) or (E_subulatus_03377)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5307</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7117_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7139_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8243" name="RXN-8243" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5311</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETO__45__6__45__AMINO__45__CAPROATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__AMINOPENTANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8244" name="N-methylputrescine oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11639) or (E_subulatus_19483) or (E_subulatus_14646) or (E_subulatus_19482) or (E_subulatus_13120) or (E_subulatus_14645) or (E_subulatus_11640) or (E_subulatus_14644)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5315</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__394_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7993_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8246" name="RXN-8246" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5315</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__7993_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7994_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8315" name="RXN-8315" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SO3_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HSO3_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8340" name="RXN-8340" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6823</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRECURSOR__45__Z_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8342" name="molybdopterin synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02069) or (E_subulatus_02068)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6823</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PRECURSOR__45__Z_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Thiocarboxylated__45__MPT__45__synthases_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_MPT__45__Synthase__45__small__45__subunits_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__4_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="4" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8344" name="molybdopterin adenylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12282) or (E_subulatus_12281) or (E_subulatus_12280) or (E_subulatus_12279)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6823</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__4_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8122_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8348" name="molybdopterin molybdotransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12282) or (E_subulatus_12281) or (E_subulatus_12280) or (E_subulatus_12279)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6823</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8122_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8123_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8349_PLANTCYC" name="RXN-8349_PLANTCYC" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12653_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8121_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8443" name="RXN-8443" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01957) or (E_subulatus_06811) or (E_subulatus_19175) or (E_subulatus_10994) or (E_subulatus_11910) or (E_subulatus_22852) or (E_subulatus_10661) or (E_subulatus_06208) or (E_subulatus_02557) or (E_subulatus_23698) or (E_subulatus_11569) or (E_subulatus_24919) or (E_subulatus_15840) or (E_subulatus_16953) or (E_subulatus_10643) or (E_subulatus_05489) or (E_subulatus_08694) or (E_subulatus_04605) or (E_subulatus_24834) or (E_subulatus_24824) or (E_subulatus_06047) or (E_subulatus_23331) or (E_subulatus_15610) or (E_subulatus_15793) or (E_subulatus_09262) or (E_subulatus_23771) or (E_subulatus_25167) or (E_subulatus_16976) or (E_subulatus_07242) or (E_subulatus_18358) or (E_subulatus_23921)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5381</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8259_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NICOTINATE_NUCLEOTIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8450" name="RXN-8450" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15024) or (E_subulatus_19163) or (E_subulatus_15023) or (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5391 , PWY-3101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__7087_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MYRICETIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8483" name="RXN-8483" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5399 , PWY-6481</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DOPAQUINONE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8652_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8497" name="RXN-8497" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13785) or (E_subulatus_05195) or (E_subulatus_07286) or (E_subulatus_13783) or (E_subulatus_08993)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6917 , PWY-5408 , PWY-5406 , PWY-5407</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LINOLENIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8678_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8629" name="H-Gcv-protein-(dihydrolipoyl)lysine:NAD+ oxidoreductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04353) or (E_subulatus_01830) or (E_subulatus_04354) or (E_subulatus_01831)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLYCLEAV-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROLIPOYL__45__GCVH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTEIN__45__LIPOYLLYSINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8631" name="fructose-bisphosphate aldolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15857) or (E_subulatus_09283) or (E_subulatus_09282) or (E_subulatus_04830) or (E_subulatus_09284) or (E_subulatus_09281) or (E_subulatus_15858) or (E_subulatus_20714) or (E_subulatus_09285)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-373</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FRU1P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCERALD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8635" name="peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02016) or (E_subulatus_01446) or (E_subulatus_16649) or (E_subulatus_25320) or (E_subulatus_08105) or (E_subulatus_00420) or (E_subulatus_16650) or (E_subulatus_08107) or (E_subulatus_20015) or (E_subulatus_18334) or (E_subulatus_21986) or (E_subulatus_13034) or (E_subulatus_10790) or (E_subulatus_08798) or (E_subulatus_04125) or (E_subulatus_08800) or (E_subulatus_05686) or (E_subulatus_04126) or (E_subulatus_05281) or (E_subulatus_22471) or (E_subulatus_08456) or (E_subulatus_08513) or (E_subulatus_20011) or (E_subulatus_21987) or (E_subulatus_10127) or (E_subulatus_20014) or (E_subulatus_08106) or (E_subulatus_13035) or (E_subulatus_05687) or (E_subulatus_23617) or (E_subulatus_08455) or (E_subulatus_20013) or (E_subulatus_17484) or (E_subulatus_07826) or (E_subulatus_20012) or (E_subulatus_15057) or (E_subulatus_01447) or (E_subulatus_21225) or (E_subulatus_03379) or (E_subulatus_08799) or (E_subulatus_23616) or (E_subulatus_02015) or (E_subulatus_04124) or (E_subulatus_13544) or (E_subulatus_13036) or (E_subulatus_25319) or (E_subulatus_02233) or (E_subulatus_00421) or (E_subulatus_11753) or (E_subulatus_13545) or (E_subulatus_05280)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5461</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8653_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8890_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8641" name="RXN-8641" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: MGLDLCTANA-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__358_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__8891_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8642" name="NADP-dependent isocitrate dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13345)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXALO__45__SUCCINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8647" name="(6E,8Z,11Z,14Z)-(5S)-5-hydroperoxyicosa-6,8,11,14-tetraenoate dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_05196) or (E_subulatus_05195)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-375</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_6E8Z11Z14Z__45__5S__45__5__45__HYDROPEROXYCOSA__45__6_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8892_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8660" name="[histone-H3]-lysine-36 demethylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02374) or (E_subulatus_06818) or (E_subulatus_24734) or (E_subulatus_02372) or (E_subulatus_02371) or (E_subulatus_02373) or (E_subulatus_14637)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8900_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__8901_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8661" name="[histone-H3]-lysine-36 demethylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02374) or (E_subulatus_06818) or (E_subulatus_24734) or (E_subulatus_02372) or (E_subulatus_02371) or (E_subulatus_02373) or (E_subulatus_14637)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8901_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FORMALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__lysine_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8667" name="hydroperoxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02016) or (E_subulatus_05686) or (E_subulatus_05687) or (E_subulatus_02015) or (E_subulatus_00420) or (E_subulatus_07826) or (E_subulatus_08834) or (E_subulatus_11753) or (E_subulatus_00421) or (E_subulatus_08836) or (E_subulatus_08835) or (E_subulatus_10790) or (E_subulatus_08833)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Donor__45__H2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Acceptor_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8668" name="protein-methionine-S-oxide reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12833) or (E_subulatus_21042) or (E_subulatus_17019) or (E_subulatus_17022) or (E_subulatus_19733) or (E_subulatus_08565) or (E_subulatus_19734) or (E_subulatus_08564) or (E_subulatus_08566) or (E_subulatus_07115) or (E_subulatus_17021) or (E_subulatus_17020) or (E_subulatus_24342) or (E_subulatus_17023) or (E_subulatus_21041)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Protein__45__L__45__methionine__45__S__45__S__45__oxides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Protein__45__L__45__methionine_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8675" name="S-adenosyl-L-methionine:precorrin-1 C-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20205)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5194 , PWY-7377 , PWY-7376 , PWY-5196</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9038_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIHYDROSIROHYDROCHLORIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8730" name="RXN-8730" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6364 , PWY-6362</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__506_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INOSITOL__45__1__45__3__45__4__45__TRIPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8761" name="cobalt-precorrin-3 C17-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03930) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7377</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9040_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9041_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8764" name="cobalt-precorrin-5B C1-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03930) or (E_subulatus_03931) or (E_subulatus_03932) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7377</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9047_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9043_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8766" name="cobalt-precorrin-6B methylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03930) or (E_subulatus_03932) or (E_subulatus_03931) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7377</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9044_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9048_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8767" name="cobalt-precorrin-7 C15-methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03930) or (E_subulatus_03931) or (E_subulatus_03932) or (E_subulatus_03929)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7377</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9048_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9045_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8772" name="RXN-8772" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5515</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__ARABITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__arabinopyranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8773" name="RXN-8773" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5516</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_XYLITOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__Xylopyranose_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8899" name="RXN-8899" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5707 , PWY-6539 , PWY-5708 , PWY-5706 , PWY-7614</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__AMINOACRYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8975" name="phospho-N-acetylmuramoyl-pentapeptide-transferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19936) or (E_subulatus_06884) or (E_subulatus_18807) or (E_subulatus_19937) or (E_subulatus_18805) or (E_subulatus_01177) or (E_subulatus_06885) or (E_subulatus_01176) or (E_subulatus_18806)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5265 , PWY-6471</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_C3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9646_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_C4_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8988" name="itaconyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02430) or (E_subulatus_12371) or (E_subulatus_02431) or (E_subulatus_00867)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5749</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ITACONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__1137_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8991" name="3-isopropylmalate dehydratase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21073) or (E_subulatus_16031) or (E_subulatus_16030) or (E_subulatus_03963) or (E_subulatus_16032) or (E_subulatus_16033) or (E_subulatus_21072)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6871 , LEUSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__D__45__THREO__45__HYDROXY__45__3__45__CARBOXY__45__ISOCAPROATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9451_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__8999" name="RXN-8999" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00738)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5785</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FARNESYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DELTA3__45__ISOPENTENYL__45__PP_c" stoichiometry="8" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_UNDECAPRENYL__45__DIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="8" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9000" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_23388) or (E_subulatus_17772)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5756</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9459_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9460_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9003" name="para-hydroxybenzoate:hexaprenyl-diphosphate hexaprenyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00014) or (E_subulatus_01543) or (E_subulatus_24160) or (E_subulatus_05634) or (E_subulatus_12511) or (E_subulatus_12512) or (E_subulatus_19962) or (E_subulatus_09512) or (E_subulatus_12510) or (E_subulatus_08023)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY3O-19 , PWY-7235</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ALL__45__TRANS__45__HEXAPRENYL__45__DIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_4__45__hydroxybenzoate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__HEXAPRENYL__45__4__45__HYDROXYBENZOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9015" name="N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18411) or (E_subulatus_05915) or (E_subulatus_17393) or (E_subulatus_17392) or (E_subulatus_12936) or (E_subulatus_18405) or (E_subulatus_18629) or (E_subulatus_03592) or (E_subulatus_20664)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6117 , PWY-5760 , PWY-6441</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SPERMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SPERMIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__6082_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__902" name="RXN-902" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft55_6a) or (EsuBft327_5a) or (EsuBft605_9a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-81</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_E__45__PHENYLITACONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBOXYMETHYL__45__HYDROXYPHENYLPROPCOA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9025" name="maltodextrin phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5941 , GLYCOCAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__1027_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__905" name="RXN-905" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1203_2a) or (EsuBft1484_6a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-81</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CARBOXYMETHYL__45__HYDROXYPHENYLPROPCOA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_BENZOYLSUCCINYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9157" name="hypoglycin A gamma-glutamyl transpeptidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06213) or (E_subulatus_10761)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5826</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__9699_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLUTATHIONE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9700_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CYS__45__GLY_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9222" name="RXN-9222" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12511) or (E_subulatus_12512) or (E_subulatus_19962) or (E_subulatus_09512) or (E_subulatus_08023) or (E_subulatus_12510)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5873 , PWY-5855</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ALL__45__TRANS__45__HEPTAPRENYL__45__DIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_4__45__hydroxybenzoate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9852_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9230" name="4-hydroxybenzoate decaprenyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12511) or (E_subulatus_12512) or (E_subulatus_19962) or (E_subulatus_09512) or (E_subulatus_08023) or (E_subulatus_12510)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5872 , PWY-5857</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__9610_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_4__45__hydroxybenzoate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9864_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__924" name="RXN-924" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9384" name="RXN-9384" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00014) or (E_subulatus_01543) or (E_subulatus_24160) or (E_subulatus_05634)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_O__45__SUCCINYL__45__L__45__HOMOSERINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9386" name="RXN-9386" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5921</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLN__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__glutamyl__45__tRNAGln_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9514" name="acetoacetyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15266) or (E_subulatus_15037) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971 , PWY-7388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Acetoacetyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Beta__45__3__45__hydroxybutyryl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9515" name="crotonyl-[acyl-carrier protein] reductase (NADP)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-7388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Crotonyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Butanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9516" name="3-oxo-hexanoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13005) or (E_subulatus_08948) or (E_subulatus_13006) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971 , PWY-7388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Butanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__hexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9518" name="3-hydroxyhexanoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15037) or (E_subulatus_15038) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__hexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R__45__3__45__hydroxyhexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9520" name="(3R)-3-hydroxyhexanoyl-[acyl-carrier protein] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxyhexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Hex__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9521" name="trans hex-2-enoyl-[acp] reductase (NADPH, B-specific)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Hex__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Hexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9523" name="3-oxo-octanoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13005) or (E_subulatus_08948) or (E_subulatus_13006) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Hexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__Oxo__45__octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9524" name="3-oxo-octanoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15037) or (E_subulatus_15038) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__Oxo__45__octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__Hydroxy__45__octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9526" name="trans oct-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__Octenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9527" name="3-oxo-decanoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13005) or (E_subulatus_08948) or (E_subulatus_13006) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__decanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9528" name="3-oxo-decanoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15265) or (E_subulatus_15038) or (E_subulatus_15266) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__decanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Beta__45__hydroxydecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9530" name="trans-&amp;Delta;2-decenoyl-[acp]reductase (NADPH, B-specific)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Trans__45__D2__45__decenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Decanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9531" name="3-oxo-dodecanoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13005) or (E_subulatus_08948) or (E_subulatus_13006) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Decanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__dodecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9532" name="3-oxo-dodecanoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15265) or (E_subulatus_15038) or (E_subulatus_15266) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__dodecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R__45__3__45__hydroxydodecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9533" name="(3R)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-7664 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxydodecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Dodec__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9534" name="trans dodec-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Dodec__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Dodecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9535" name="3-oxoacyl-[acyl-carrier-protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13005) or (E_subulatus_08948) or (E_subulatus_13006) or (E_subulatus_15038) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Dodecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__myristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9536" name="3-oxo-meristoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__myristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R__45__3__45__hydroxymyristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9537" name="(3R)-3-hydroxymyristoyl-[acyl-carrier protein] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxymyristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Tetradec__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9538" name="trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Tetradec__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Myristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9539" name="3-oxo-palmitoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13005) or (E_subulatus_08948) or (E_subulatus_13006) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Myristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__palmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9540" name="3-oxo-palmitoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__palmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_R__45__3__45__Hydroxypalmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9542" name="trans hexadecenoyl-[acp] reductase (NADPH, B-specific)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__Hexadecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Palmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9544" name="RXN-9544" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5972</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10260_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10261_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9546" name="RXN-9546" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5972</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10262_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_STEAROYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9548" name="RXN-9548" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5989</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Stearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_STEARIC_ACID_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9549" name="RXN-9549" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7746 , PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Palmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PALMITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9550" name="RXN-9550" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6282 , PWY-5366</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Palmitoleoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9245_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9552" name="3-oxo-petroslinoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5367</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__petroselinoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_R__45__3__45__hydroxypetroselinoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9553" name="RXN-9553" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5367</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxypetroselinoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Petrosel__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9555" name="RXN-9555" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-5973</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Cis__45__vaccenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__9247_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9556" name="3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5973</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__cis__45__vaccenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R__45__3__45__hydroxy__45__cis__45__vaccenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9557" name="3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5973</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxy__45__cis__45__vaccenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__vaccen__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9558" name="cis-vaccen-2-enoyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5973</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_cis__45__vaccen__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cis__45__vaccenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9597" name="primary amine oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11639) or (E_subulatus_19483) or (E_subulatus_14646) or (E_subulatus_19482) or (E_subulatus_13120) or (E_subulatus_14645) or (E_subulatus_11640) or (E_subulatus_14644)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Primary__45__Amines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Aldehydes_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9599" name="amine oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11639) or (E_subulatus_19483) or (E_subulatus_14646) or (E_subulatus_19482) or (E_subulatus_13120) or (E_subulatus_14645) or (E_subulatus_11640) or (E_subulatus_14644)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Diamines_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Monoamines_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9600" name="histaminase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11639) or (E_subulatus_19483) or (E_subulatus_19482) or (E_subulatus_14646) or (E_subulatus_13120) or (E_subulatus_14645) or (E_subulatus_11640) or (E_subulatus_14644)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6181</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HISTAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_IMIDAZOLE_ACETALDEHYDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9601" name="RXN-9601" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6001</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9615" name="RXN-9615" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft866_4a) or (EsuBft826_2a) or (EsuBft108_19a) or (EsuBft47_24a) or (EsuBft1655_7a) or (EsuBft1205_4a) or (EsuBft797_9a) or (EsuBft108_17a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_AMMONIUM_e" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9623" name="palmitate-CoA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_07473) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5972 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PALMITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PALMITYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9624" name="RXN-9624" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6733 , PWY-5972 , PWY3O-355</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_STEAROYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_STEARIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9627" name="RXN-9627" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6733</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LAUROYLCOA__45__CPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DODECANOATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9629" name="RXN-9629" reversible="false" fast="false">
        <listOfReactants>
          <speciesReference species="M_CPD__45__9965_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ARACHIDIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9632" name="3-oxo-stearoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5989</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Palmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__stearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9633" name="3-oxo-stearoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5989 , PWY3O-355</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__stearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R__45__3__45__hydroxystearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9634" name="3-hydroxystearoyl-[acyl-carrier protein] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5989 , PWY3O-355</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxystearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Octadec__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9635" name="trans-octadec-2-enoyl-[acyl-carrier-protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5989</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Octadec__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Stearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9644" name="acyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5147 , PWY-6001</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OLEATE__45__CPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9648" name="3-oxo-hexanoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_15038) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Butanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__hexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9650" name="3-oxo-octanoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_15038) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Hexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__Oxo__45__octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9651" name="3-oxoacyl-[acyl-carrier-protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_15038) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__decanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9652" name="3-oxo-dodecanoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_15038) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Decanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__dodecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9653" name="3-oxo-meristoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_15038) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Dodecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__myristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9654" name="3-oxo-palmitoyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_15038) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Myristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__palmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9655" name="3-hydroxydecanoyl-[acp] dehydrase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602) or (E_subulatus_15038) or (E_subulatus_15037)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-862 , PWY-5994 , PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Beta__45__hydroxydecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Trans__45__D2__45__decenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9657" name="crotonyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Crotonyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Butanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9658" name="trans hex-2-enoyl-[acp]-reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Hex__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Hexanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9659" name="trans oct-2-enoyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__Octenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9660" name="trans-&amp;Delta;2-decenoyl-[acp]-reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Trans__45__D2__45__decenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Decanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9661" name="trans dodec-2-enoyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Dodec__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Dodecanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9662" name="trans tetradec-2-enoyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Tetradec__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Myristoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9663" name="trans hexadecenoyl-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5971</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__Hexadecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Palmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9666" name="RXN-9666" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6733 , PWY-321 , PWY-5996 , PWY-1121</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OLEATE__45__CPD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9670" name="lysophospholipid oleoyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19306)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5995 , PWY-6433 , PWY-5368</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glycerolipids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Oleoyl__45__lipid_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9673" name="acyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6000</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_LINOLEIC_ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__969" name="glycolate oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23903) or (E_subulatus_19876) or (E_subulatus_23904) or (E_subulatus_23906) or (E_subulatus_19878) or (E_subulatus_06725) or (E_subulatus_23908) or (E_subulatus_05316) or (E_subulatus_23907) or (E_subulatus_19877) or (E_subulatus_23905) or (E_subulatus_06724)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-181</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GLYCOLLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYOX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9721" name="galactolipid galactosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01840) or (E_subulatus_10302) or (E_subulatus_18292) or (E_subulatus_17738) or (E_subulatus_14739) or (E_subulatus_09153) or (E_subulatus_01839) or (E_subulatus_14738) or (E_subulatus_18293) or (E_subulatus_09152)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-401</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__Galactosyl__45__12__45__diacyl__45__glycerols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10363_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10364_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIACYLGLYCEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9725" name="RXN-9725" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14571) or (E_subulatus_03281) or (E_subulatus_08480)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6035</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__591_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__7630_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9758" name="dimethylsulfoniopropionate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_18015) or (E_subulatus_00192) or (E_subulatus_03415) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6055 , PWY-6054</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__10472_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SS__45__DIMETHYL__45__BETA__45__PROPIOTHETIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9779" name="RXN-9779" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6367 , PWY-6368</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHOSPHATIDYL__45__MYO__45__INOSITOL__45__45__45__BISPHOSPHA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__PHOSPHATIDYL__45__1D__45__MYO__45__INOSITOL__45__5__45__PHOSPHA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9787" name="cysteine:[ThiI sulfur-carrier protein]-L-cysteine sulfurtransferase desulfurase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07898) or (E_subulatus_00241) or (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Sulfur__45__Carrier__45__Proteins__45__ThiI_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Sulfurylated__45__ThiI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__982" name="cytoplasmic arsenate reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02689) or (E_subulatus_02688)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4202 , PWY-4621</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ARSENATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Red__45__Glutaredoxins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__763_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__Glutaredoxins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9839" name="mannuronan C-5 epimerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15656) or (E_subulatus_00803) or (E_subulatus_08272) or (E_subulatus_03986) or (E_subulatus_03552) or (E_subulatus_01625) or (E_subulatus_19882) or (E_subulatus_00417) or (E_subulatus_23093) or (E_subulatus_00589) or (E_subulatus_03555) or (E_subulatus_00060) or (E_subulatus_05930) or (E_subulatus_19879) or (E_subulatus_09025) or (E_subulatus_17049) or (E_subulatus_00588) or (E_subulatus_02080) or (E_subulatus_05929) or (E_subulatus_10233) or (E_subulatus_17177) or (E_subulatus_20165) or (E_subulatus_08273) or (E_subulatus_05926) or (E_subulatus_06902) or (E_subulatus_05924) or (E_subulatus_10237) or (E_subulatus_00591) or (E_subulatus_00587) or (E_subulatus_08660) or (E_subulatus_00874) or (E_subulatus_01629) or (E_subulatus_10234) or (E_subulatus_23100) or (E_subulatus_03553) or (E_subulatus_15654) or (E_subulatus_00590) or (E_subulatus_07356) or (E_subulatus_25052) or (E_subulatus_16473) or (E_subulatus_14004) or (E_subulatus_01626) or (E_subulatus_19881) or (E_subulatus_00592) or (E_subulatus_06531) or (E_subulatus_02081) or (E_subulatus_25053) or (E_subulatus_09023) or (E_subulatus_10235) or (E_subulatus_05925) or (E_subulatus_06534) or (E_subulatus_09024) or (E_subulatus_15655) or (E_subulatus_09879) or (E_subulatus_06320) or (E_subulatus_03554) or (E_subulatus_03987) or (E_subulatus_11969) or (E_subulatus_03556) or (E_subulatus_25051) or (E_subulatus_15653) or (E_subulatus_19880) or (E_subulatus_15195) or (E_subulatus_15382) or (E_subulatus_25054) or (E_subulatus_19819) or (E_subulatus_03988) or (E_subulatus_05928) or (E_subulatus_16154) or (E_subulatus_01627) or (E_subulatus_23091) or (E_subulatus_06533) or (E_subulatus_20421) or (E_subulatus_14005) or (E_subulatus_10236) or (E_subulatus_08171) or (E_subulatus_00061) or (E_subulatus_01628) or (E_subulatus_23092) or (E_subulatus_23742) or (E_subulatus_06370) or (E_subulatus_05927) or (E_subulatus_13239) or (E_subulatus_23094) or (E_subulatus_17050) or (E_subulatus_17544) or (E_subulatus_00807) or (E_subulatus_13817) or (E_subulatus_06532) or (E_subulatus_00804)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6082 , PWY-6073</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Poly__45__beta__45__D__45__Mannuronate_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ALGINATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9896" name="RXN-9896" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15873)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-6100</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__HYDROXY__45__N6N6N6__45__TRIMETHYL__45__L__45__LYSINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_4__45__TRIMETHYLAMMONIOBUTANAL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLY_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9940" name="N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18411) or (E_subulatus_05915) or (E_subulatus_17393) or (E_subulatus_17392) or (E_subulatus_12936) or (E_subulatus_18405) or (E_subulatus_18629) or (E_subulatus_03592) or (E_subulatus_20664)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6117</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_N1__45__ACETYLSPERMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SPERMIDINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10687_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9951" name="isocitrate dehydrogenase (NADP+)" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13345)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THREO__45__DS__45__ISO__45__CITRATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OXALO__45__SUCCINATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9952" name="6-phosphogluconate dehydrogenase, decarboxylating" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09945) or (E_subulatus_05762) or (E_subulatus_02177) or (E_subulatus_02178) or (E_subulatus_20831)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: OXIDATIVEPENT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__2961_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_RIBULOSE__45__5P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN__45__9958" name="malonate-semialdehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25404)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6373</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONATE__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1132" name="lipoate acetyltransferase N6-(dihydrolipoyl)lysine:NAD+ oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04353) or (E_subulatus_01830) or (E_subulatus_04354) or (E_subulatus_01831)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PYRUVDEHYD-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__dihydrolipoate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__lipoate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1133" name="lipoate acetyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21822) or (E_subulatus_21824) or (E_subulatus_21823) or (E_subulatus_18266) or (E_subulatus_19867)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PYRUVDEHYD-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__acetylDHlipoyl_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__dihydrolipoate_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1134" name="pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02152) or (E_subulatus_02150) or (E_subulatus_02149) or (E_subulatus_14278) or (E_subulatus_02151)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PYRUVDEHYD-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__lipoate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pyruvate__45__dehydrogenase__45__acetylDHlipoyl_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1147" name="dihydrolipoyllysine-residue succinyltransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18721) or (E_subulatus_16476) or (E_subulatus_17006) or (E_subulatus_16478) or (E_subulatus_16477) or (E_subulatus_04912) or (E_subulatus_16988) or (E_subulatus_16987)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5084 , PWY66-398</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SUC__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxo__45__glutarate__45__dehydrogenase__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxo__45__glutarate__45__dehydro__45__suc__45__DH__45__lipoyl_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1321" name="queuine tRNA-ribosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18752)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6700</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_7__45__AMINOMETHYL__45__7__45__DEAZAGUANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Guanine34__45__in__45__tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GUANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_tRNA__45__with__45__7__45__aminomethyl__45__7__45__deazaguanine_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1441" name="ADP-ribose pyrophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09770) or (E_subulatus_01494) or (E_subulatus_01493) or (E_subulatus_05076) or (E_subulatus_18590) or (E_subulatus_18628) or (E_subulatus_01497) or (E_subulatus_19225) or (E_subulatus_09771) or (E_subulatus_01496) or (E_subulatus_09769) or (E_subulatus_01495) or (E_subulatus_01498)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADENOSINE_DIPHOSPHATE_RIBOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15317_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1461" name="coproporphyrinogen III oxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00322) or (E_subulatus_07854) or (E_subulatus_00323)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1415 , PWY-7159 , CHLOROPHYLL-SYN , HEME-BIOSYNTHESIS-II</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_COPROPORPHYRINOGEN_III_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTOPORPHYRINOGEN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1483" name="ferroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06381) or (E_subulatus_06380) or (E_subulatus_06379) or (E_subulatus_06382)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="4" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FE__43__2_c" stoichiometry="4" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_FE__43__3_c" stoichiometry="4" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1602" name="RXN0-1602" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10507)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DITP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DIMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__1603" name="RXN0-1603" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10507)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_XTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_XANTHOSINE__45__5__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2044" name="3-hydroxyadipyl-CoA dehydrogenase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04640) or (E_subulatus_02116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-1361 , PWY0-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__HYDROXYADIPYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__KETO__45__ADIPYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2141" name="3-oxoacyl-[acyl-carrier-protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-862 , PWY-7858</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cis__45__delta__45__3__45__decenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_b__45__Keto__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2142" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-862 , PWY-7858</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_b__45__Keto__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_b__45__Hydroxy__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2144" name="3-hydroxy cis &amp;Delta;5-dodecenoyl-[acp] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-862 , PWY-7858</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_b__45__Hydroxy__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Trans__45__D3__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2145" name="cis-&amp;Delta;5-dodecenoyl-[acp]:NAD+ oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-862 , PWY-7858</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Trans__45__D3__45__cis__45__D5__45__dodecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Cis__45__Delta5__45__dodecenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2161" name="L-serine:tRNASec ligase (AMP-forming)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18290) or (E_subulatus_17805) or (E_subulatus_18289)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-901 , PWY-6281</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_tRNA__45__Sec_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__seryl__45__SEC__45__tRNAs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2301" name="RXN0-2301" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: LEU-DEG2-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ETF__45__Oxidized_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ISOVALERYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__METHYL__45__CROTONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ETF__45__Reduced_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2381" name="indoleglycerol phosphate aldolase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00782) or (E_subulatus_10240) or (E_subulatus_00781) or (E_subulatus_00779) or (E_subulatus_00780) or (E_subulatus_10241) or (E_subulatus_10239) or (E_subulatus_18297)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6949 , TRPSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_INDOLE__45__3__45__GLYCEROL__45__P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GAP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INDOLE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2382" name="tryptophan synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00782) or (E_subulatus_10240) or (E_subulatus_00781) or (E_subulatus_00779) or (E_subulatus_00780) or (E_subulatus_10241) or (E_subulatus_10239) or (E_subulatus_18297)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: TRPSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_INDOLE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_TRP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2601" name="DNA glycosylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21315) or (E_subulatus_21312) or (E_subulatus_21316) or (E_subulatus_21313) or (E_subulatus_21314) or (E_subulatus_21317)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Damaged__45__DNA__45__Pyrimidine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DNA__45__containing__45__a__45__Apyrimidinic__45__Sites_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__267" name="thioredoxin peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09375) or (E_subulatus_09374) or (E_subulatus_09376) or (E_subulatus_13588) or (E_subulatus_05511) or (E_subulatus_05512) or (E_subulatus_05513) or (E_subulatus_13587)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__276" name="RXN0-276" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20113)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__HYDROXYMETHYLGLUTATHIONE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__548_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__2921" name="tetrahydrofolylpolyglutamate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09050) or (E_subulatus_24089) or (E_subulatus_09048) or (E_subulatus_24088) or (E_subulatus_09049) or (E_subulatus_24090) or (E_subulatus_24087)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-2161</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLT_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_METHYLENE__45__THF__45__GLU__45__N_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__302" name="2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04681)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7560 , NONMEVIPP-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__PHOSPHO__45__4__45__CYTIDINE__45__5__45__DIPHOSPHO__45__2__45__C__45__MET_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2C__45__METH__45__D__45__ERYTHRITOL__45__CYCLODIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__308" name="L-cysteine:[protein cysteine] sulfurtransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00241) or (E_subulatus_07898) or (E_subulatus_20728) or (E_subulatus_20727) or (E_subulatus_20729) or (E_subulatus_20726)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7904 , PWY-7889 , PWY-6823 , PWY0-1021 , PWY-7891 , PWY-7888 , PWY-6891 , PWY-7892 , PWY-6892</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cysteine__45__Desulfurase__45__L__45__cysteine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__Cysteine__45__Desulfurase__45__persulfide_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__3542" name="RXN0-3542" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06847)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_THIAMINE__45__PYROPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_THIAMINE__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__383" name="RXN0-383" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_16985) or (E_subulatus_16057) or (E_subulatus_02580) or (E_subulatus_01318) or (E_subulatus_16056)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__384" name="pyrophosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_16057) or (E_subulatus_16985) or (E_subulatus_02580) or (E_subulatus_01318) or (E_subulatus_16056)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DAMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__385" name="RXN0-385" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_16985) or (E_subulatus_10507) or (E_subulatus_02580) or (E_subulatus_16057) or (E_subulatus_01318) or (E_subulatus_16056)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DGTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DGMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__3962" name="RXN0-3962" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7268 , PWY-5768</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__4401" name="NADH pyrophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16985)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NMNH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5038" name="3&apos;,5&apos;-cyclic-AMP phosphodiesterase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09252) or (E_subulatus_09254) or (E_subulatus_09250) or (E_subulatus_22962) or (E_subulatus_09253) or (E_subulatus_22961) or (E_subulatus_09251)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CAMP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5055" name="RXN0-5055" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft748_6a) or (EsuBft162_4a) or (EsuBft218_9a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY0-1264</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Carboxybiotin__45__BCCP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BCCP__45__dimers_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5073" name="RXN0-5073" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06847)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ITP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_IDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5101" name="N-ethylmaleimide reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24053)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_N__45__ETHYLMALEIMIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD0__45__903_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5107" name="dTTP pyrophosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_16985) or (E_subulatus_16057) or (E_subulatus_02580) or (E_subulatus_01318) or (E_subulatus_16056)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_TMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5114" name="phosphoserine phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19169) or (E_subulatus_19170)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: SERSYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__P__45__SERINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5131" name="RXN0-5131" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1337_7a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_IS30__45__Insertion__45__Sequences_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_IS30__45__with__45__Integrated__45__Transposon_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5180" name="RXN0-5180" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17550) or (E_subulatus_05634) or (E_subulatus_00738) or (E_subulatus_00014) or (E_subulatus_01543) or (E_subulatus_24160)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5815</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FARNESYL__45__PP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DELTA3__45__ISOPENTENYL__45__PP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__1028_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5182" name="maltodextrin phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: GLYCOCAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALTOTETRAOSE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALTOTRIOSE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5184" name="maltodextrin phosphorylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00047)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_1__45__4__45__alpha__45__D__45__Glucan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_1__45__4__45__alpha__45__D__45__Glucan_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLC__45__1__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5217" name="RXN0-5217" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10709)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY0-1303</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CADAVERINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINAMINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD0__45__1065_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_5__45__METHYLTHIOADENOSINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5222" name="RXN0-5222" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY0-1471 , CYANCAT-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CARBAMATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5224" name="carbonic anhydrase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13623) or (E_subulatus_15067) or (E_subulatus_25291) or (E_subulatus_21159) or (E_subulatus_21157) or (E_subulatus_21158) or (E_subulatus_25289) or (E_subulatus_24440) or (E_subulatus_13621) or (E_subulatus_24441) or (E_subulatus_13622) or (E_subulatus_15917) or (E_subulatus_25290) or (E_subulatus_15068)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYQT-4429 , CYANCAT-PWY , PWY-5744 , PWY-7115 , PWY-5789 , PWY-241 , PWY-5743 , PWY-6142 , PWY-7117</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5244" name="RXN0-5244" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5245" name="RXN0-5245" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5248" name="RXN0-5248" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5254" name="RXN0-5254" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Menaquinones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Menaquinols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5257" name="RXN0-5257" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5259" name="RXN0-5259" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ETR__45__Quinones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETR__45__Quinols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5260" name="RXN0-5260" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-6118 , PWY-4261 , PWY0-1584 , PWY-6952 , PWY0-1561</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GLYCEROL__45__3P_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIHYDROXY__45__ACETONE__45__PHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5265" name="RXN0-5265" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="4" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="4" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5293" name="succinate-semialdehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_03414)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6536</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUCC__45__S__45__ALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5330" name="NADH dehydrogenase (ubiquinone)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_04901) or (E_subulatus_24041) or (E_subulatus_03077) or (E_subulatus_03082) or (E_subulatus_24043) or (E_subulatus_20230) or (E_subulatus_03083) or (E_subulatus_22862) or (E_subulatus_04899) or (E_subulatus_19174) or (E_subulatus_09984) or (E_subulatus_04902) or (E_subulatus_03079) or (E_subulatus_22859) or (E_subulatus_09985) or (E_subulatus_22858) or (E_subulatus_22860) or (E_subulatus_17880) or (E_subulatus_01687) or (E_subulatus_13132) or (E_subulatus_04900) or (E_subulatus_17879) or (E_subulatus_24042) or (E_subulatus_11126) or (E_subulatus_03078) or (E_subulatus_22864) or (E_subulatus_04903) or (E_subulatus_11127) or (E_subulatus_04904) or (E_subulatus_22861) or (E_subulatus_22863) or (E_subulatus_22857) or (E_subulatus_17878) or (E_subulatus_21002) or (E_subulatus_24044)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7269 , PWY0-1568 , PWY-7279 , PWY0-1567 , PWY0-1573</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5359" name="diguanylate cyclase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12416)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_C__45__DI__45__GMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5393" name="enoyl-CoA hydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20646) or (E_subulatus_19349) or (E_subulatus_20648) or (E_subulatus_20647) or (E_subulatus_04056) or (E_subulatus_13805) or (E_subulatus_13806) or (E_subulatus_19621) or (E_subulatus_20645) or (E_subulatus_04057) or (E_subulatus_19620) or (E_subulatus_20644) or (E_subulatus_19350) or (E_subulatus_19622) or (E_subulatus_13807)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1337</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__1162_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD0__45__1163_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5398" name="pseudouridine-5&apos;-phosphate glycosidase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22423) or (E_subulatus_22422)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6019</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_URACIL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__15317_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PSEUDOURIDINE__45__5__45__P_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5408" name="inositol-phosphate phosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22024) or (E_subulatus_14942) or (E_subulatus_18485) or (E_subulatus_19762) or (E_subulatus_22023) or (E_subulatus_22025) or (E_subulatus_01398) or (E_subulatus_01396) or (E_subulatus_01397) or (E_subulatus_14670) or (E_subulatus_22022) or (E_subulatus_04574)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-4702</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_D__45__MYO__45__INOSITOL__45__1__45__MONOPHOSPHATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MYO__45__INOSITOL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5462" name="GTPase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_07754) or (E_subulatus_06476) or (E_subulatus_01794) or (E_subulatus_14955) or (E_subulatus_22833) or (E_subulatus_20419) or (E_subulatus_14248) or (E_subulatus_01714) or (E_subulatus_12646) or (E_subulatus_13555) or (E_subulatus_14957) or (E_subulatus_14533) or (E_subulatus_19429) or (E_subulatus_12649) or (E_subulatus_24658) or (E_subulatus_13554) or (E_subulatus_21364) or (E_subulatus_11663) or (E_subulatus_13969) or (E_subulatus_12213) or (E_subulatus_12211) or (E_subulatus_12748) or (E_subulatus_13188) or (E_subulatus_19691) or (E_subulatus_21475) or (E_subulatus_01713) or (E_subulatus_10392) or (E_subulatus_14956) or (E_subulatus_05373) or (E_subulatus_12647) or (E_subulatus_07733) or (E_subulatus_20416) or (E_subulatus_19730) or (E_subulatus_13487) or (E_subulatus_22834) or (E_subulatus_14154) or (E_subulatus_00278) or (E_subulatus_19428) or (E_subulatus_24659) or (E_subulatus_07752) or (E_subulatus_21360) or (E_subulatus_15589) or (E_subulatus_21359) or (E_subulatus_06184) or (E_subulatus_00231) or (E_subulatus_13968) or (E_subulatus_12209) or (E_subulatus_12749) or (E_subulatus_07262) or (E_subulatus_09220) or (E_subulatus_22538) or (E_subulatus_03327) or (E_subulatus_08550) or (E_subulatus_00805) or (E_subulatus_10006) or (E_subulatus_02379) or (E_subulatus_03328) or (E_subulatus_20418) or (E_subulatus_23400) or (E_subulatus_24662) or (E_subulatus_21474) or (E_subulatus_19692) or (E_subulatus_21550) or (E_subulatus_24661) or (E_subulatus_12214) or (E_subulatus_24656) or (E_subulatus_20417) or (E_subulatus_14330) or (E_subulatus_06847) or (E_subulatus_00228) or (E_subulatus_07732) or (E_subulatus_12210) or (E_subulatus_11850) or (E_subulatus_20791) or (E_subulatus_09223) or (E_subulatus_07028) or (E_subulatus_00279) or (E_subulatus_21743) or (E_subulatus_00229) or (E_subulatus_24660) or (E_subulatus_01252) or (E_subulatus_12141) or (E_subulatus_12645) or (E_subulatus_22300) or (E_subulatus_12212) or (E_subulatus_20415) or (E_subulatus_15855) or (E_subulatus_02378) or (E_subulatus_00706) or (E_subulatus_05372) or (E_subulatus_17245) or (E_subulatus_05487) or (E_subulatus_19729) or (E_subulatus_23399) or (E_subulatus_24986) or (E_subulatus_21549) or (E_subulatus_01715) or (E_subulatus_15021) or (E_subulatus_19613) or (E_subulatus_01136) or (E_subulatus_21362) or (E_subulatus_17264) or (E_subulatus_06904) or (E_subulatus_06183) or (E_subulatus_05486) or (E_subulatus_21564) or (E_subulatus_16684) or (E_subulatus_00232) or (E_subulatus_09224) or (E_subulatus_09222) or (E_subulatus_24655) or (E_subulatus_00806) or (E_subulatus_07027) or (E_subulatus_16983) or (E_subulatus_24657) or (E_subulatus_21363) or (E_subulatus_12648) or (E_subulatus_07753) or (E_subulatus_21581) or (E_subulatus_16063) or (E_subulatus_00230) or (E_subulatus_12208) or (E_subulatus_21361) or (E_subulatus_05916) or (E_subulatus_20963) or (E_subulatus_06905) or (E_subulatus_09221) or (E_subulatus_17265)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5468" name="peroxiredoxin" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08800) or (E_subulatus_08799) or (E_subulatus_18794) or (E_subulatus_21611) or (E_subulatus_18793) or (E_subulatus_18334) or (E_subulatus_20829) or (E_subulatus_08798) or (E_subulatus_17339)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Red__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Cys2__45__Peroxiredoxin__45__Disulfide_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ox__45__Thioredoxin_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__Cys2__45__Peroxiredoxins_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__5515" name="CTP:2,3,4-saturated L-phosphatidate cytidylyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25089)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__3__45__4__45__Saturated__45__L__45__Phosphatidates_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CDP__45__2__45__3__45__4__45__Saturated__45__Diacylglycerols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6359" name="thiosulfate sulfurtransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24020) or (E_subulatus_24021) or (E_subulatus_02631) or (E_subulatus_24019) or (E_subulatus_24022) or (E_subulatus_24025) or (E_subulatus_11975) or (E_subulatus_24023) or (E_subulatus_11976) or (E_subulatus_24024) or (E_subulatus_11738)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Sulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HCN_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Unsulfurated__45__Sulfur__45__Acceptors_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HSCN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6377" name="nitrite reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_22766) or (E_subulatus_22767)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-723 , PWY-5675</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_NITRITE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="5" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMMONIUM_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6382" name="inosine triphosphate pyrophosphatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16055) or (E_subulatus_16054) or (E_subulatus_16057) or (E_subulatus_10507) or (E_subulatus_02580) or (E_subulatus_16985) or (E_subulatus_01318) or (E_subulatus_16056)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ITP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_IMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6480" name="ribonuclease P" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00218) or (E_subulatus_00219)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1479</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD0__45__2354_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_tRNA__45__fragment_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_tRNAs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6490" name="RXN0-6490" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OROTATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DI__45__H__45__OROTATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6491" name="dihydroorotate dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06327) or (E_subulatus_06326)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DI__45__H__45__OROTATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OROTATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6515" name="16S rRNA m2G966 methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25436)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_16S__45__rRNA__45__guanine__45__966_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_16S__45__rRNA__45__N2__45__methylguanine966_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6554" name="dihydroorotate dehydrogenase (MQ)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06327) or (E_subulatus_06326)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DI__45__H__45__OROTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Menaquinones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OROTATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Menaquinols_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6725" name="phospholipase A2" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08800) or (E_subulatus_02033) or (E_subulatus_08799) or (E_subulatus_08798)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__1__45__PHOSPHATIDYL__45__ETHANOLAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__LYSOPHOSPHATIDYLETHANOLAMINES_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__6948" name="acetyl-CoA:L-glutamate N-acetyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15123)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MET_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACETYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD0__45__2015_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__7005" name="RXN0-7005" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_L__45__DELTA1__45__PYRROLINE_5__45__CARBOXYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_E__45___c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PRO_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__7008" name="proline dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06840) or (E_subulatus_06839)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1544</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PRO_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DELTA1__45__PYRROLINE_5__45__CARBOXYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__7080" name="RXN0-7080" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12377_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CTP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__HYDROXY__45__CTP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__7192" name="biotin-[acetyl-CoA-carboxylase] ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16341) or (E_subulatus_03808) or (E_subulatus_03807)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_BIOTIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BIO__45__5__45__AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__722" name="2&apos;-deoxyuridine 5&apos;-diphosphate:oxidized NrdH glutaredoxin-like protein oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16363) or (E_subulatus_20463) or (E_subulatus_16359) or (E_subulatus_17310) or (E_subulatus_20465) or (E_subulatus_17311) or (E_subulatus_16362) or (E_subulatus_15746) or (E_subulatus_15977) or (E_subulatus_17312) or (E_subulatus_17309) or (E_subulatus_25205) or (E_subulatus_16358) or (E_subulatus_07744) or (E_subulatus_15745) or (E_subulatus_07745) or (E_subulatus_25204) or (E_subulatus_11791) or (E_subulatus_18208) or (E_subulatus_16360) or (E_subulatus_16361) or (E_subulatus_20464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-166</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__NrdH__45__Proteins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DUDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__NrdH__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__7230" name="choline dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16598) or (E_subulatus_13482)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ETR__45__Quinones_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CHOLINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ETR__45__Quinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_BETAINE_ALDEHYDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__7238" name="cis-vaccenoyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__9247_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_e" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__18346_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__7239" name="oleoyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OLEATE__45__CPD_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_OLEOYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__7248" name="palmitoleoyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__9245_e" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10269_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__747" name="2&apos;-deoxyadenosine 5&apos;-diphosphate:oxidized NrdH glutaredoxin-like protein oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16363) or (E_subulatus_20463) or (E_subulatus_16359) or (E_subulatus_17310) or (E_subulatus_20465) or (E_subulatus_17311) or (E_subulatus_16362) or (E_subulatus_15746) or (E_subulatus_15977) or (E_subulatus_17312) or (E_subulatus_17309) or (E_subulatus_25205) or (E_subulatus_16358) or (E_subulatus_07744) or (E_subulatus_15745) or (E_subulatus_07745) or (E_subulatus_25204) or (E_subulatus_11791) or (E_subulatus_18208) or (E_subulatus_16360) or (E_subulatus_16361) or (E_subulatus_20464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7220</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__NrdH__45__Proteins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__NrdH__45__Proteins_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__748" name="2&apos;-deoxyguanosine 5&apos;-diphosphate:oxidized NrdH glutaredoxin-like protein oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16363) or (E_subulatus_20463) or (E_subulatus_16359) or (E_subulatus_17310) or (E_subulatus_20465) or (E_subulatus_17311) or (E_subulatus_16362) or (E_subulatus_15746) or (E_subulatus_15977) or (E_subulatus_17312) or (E_subulatus_17309) or (E_subulatus_25205) or (E_subulatus_16358) or (E_subulatus_07744) or (E_subulatus_15745) or (E_subulatus_07745) or (E_subulatus_25204) or (E_subulatus_11791) or (E_subulatus_18208) or (E_subulatus_16360) or (E_subulatus_16361) or (E_subulatus_20464)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7222</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Reduced__45__NrdH__45__Proteins_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Oxidized__45__NrdH__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DGDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__882" name="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16043) or (E_subulatus_11846)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7560</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Reduced__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_2C__45__METH__45__D__45__ERYTHRITOL__45__CYCLODIPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Oxidized__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HYDROXY__45__METHYL__45__BUTENYL__45__DIP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__884" name="dimethylallyl-diphosphate:NAD(P)+ oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_11846)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7560 , NONMEVIPP-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Reduced__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_HYDROXY__45__METHYL__45__BUTENYL__45__DIP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4211_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Oxidized__45__ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__901" name="xanthine:NAD+ oxidoreductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00870) or (E_subulatus_07434) or (E_subulatus_07435) or (E_subulatus_07436) or (E_subulatus_09063) or (E_subulatus_09064)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6596 , PWY-5695 , PWY-6607 , PWY-5497 , P164-PWY , PWY-6608 , PWY-6606 , SALVADEHYPOX-PWY , PWY-6999 , PWY-6538</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_XANTHINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_URATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__947" name="octanoyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08614) or (E_subulatus_16076)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-501</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Octanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Lipoyl__45__Protein__45__L__45__Lysine_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Octanoylated__45__domains_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN0__45__949" name="lipoyl synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_14026) or (E_subulatus_14025) or (E_subulatus_01352)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY0-1275 , PWY-6987 , PWY0-501</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="6" constant="false"/>
          <speciesReference species="M_Reduced__45__ferredoxins_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Octanoylated__45__domains_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Fe4S4__45__Cluster__45__Protein_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Dihydro__45__Lipoyl__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CH33ADO_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_MET_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_CPD__45__7046_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_Iron__45__Sulfur__45__Cluster__45__Scaffold__45__Proteins_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FE__43__2_c" stoichiometry="4" constant="false"/>
          <speciesReference species="M_Oxidized__45__ferredoxins_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__10" name="protochlorophyllide oxidoreductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02690)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Light_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MONO__45__VINYL__45__PROTOCHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__144" name="RXN1F-144" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft49_23a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_GERANYLGERANYL__45__PP_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PHYTOENE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__147" name="RXN1F-147" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882) or (E_subulatus_04592) or (E_subulatus_15408) or (E_subulatus_00193)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5946</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__114_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__115_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__148" name="RXN1F-148" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882) or (E_subulatus_04592) or (E_subulatus_15408) or (E_subulatus_00193)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5947</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__115_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__118_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__150" name="RXN1F-150" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882) or (E_subulatus_04592) or (E_subulatus_15408) or (E_subulatus_00193)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-7939 , PWY-7938 , PWY-5943 , PWY-7591</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__114_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__126_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__151" name="RXN1F-151" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882) or (E_subulatus_04592) or (E_subulatus_15408) or (E_subulatus_00193)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-7938 , PWY-5943</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__126_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__129_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__160" name="ent-7&amp;alpha;-hydroxykaur-16-en-19-oate monooxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5034 , PWY-5047</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__136_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__138_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__161" name="GA12-aldehyde monooxygenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10882)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5034 , PWY-5047</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Red__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__138_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__95_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ox__45__NADPH__45__Hemoprotein__45__Reductases_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__162" name="RXN1F-162" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5070</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__95_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__97_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__163" name="RXN1F-163" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5070</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__97_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__120_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__165" name="RXN1F-165" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5070</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1F__45__134_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__137_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__167" name="RXN1F-167" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5035</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__695_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__10332_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__168" name="RXN1F-168" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5035</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__10332_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__96_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__20" name="magnesium chelatase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_19900) or (E_subulatus_03924) or (E_subulatus_02121) or (E_subulatus_19901) or (E_subulatus_14033) or (E_subulatus_02120)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-7159 , CHLOROPHYLL-SYN , PWY-5531</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTOPORPHYRIN_IX_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MG__43__2_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MG__45__PROTOPORPHYRIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__461" name="RXN1F-461" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03526)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-5348 , PWY-7168 , PWY-5320 , PWY-7143</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__90_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__453_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__462" name="RXN1F-462" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03526)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-7172 , PWY-7129 , PWY-5321 , PWY-7137 , PWY-7173 , PWY-5390</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__12575_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__520_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1F__45__437_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__66" name="chlorophyll synthetase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18436)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5068 , PWY-7764 , PWY-5086</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHYTYL__45__PYROPHOSPHATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CHLOROPHYLL__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__72" name="3,8-divinyl protochlorophyllide a 8-vinyl reductase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12327)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MONO__45__VINYL__45__PROTOCHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_DIVINYL__45__PROTOCHLOROPHYLLIDE__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1F__45__93" name="dihydrokaempferol synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15024) or (E_subulatus_19163) or (E_subulatus_15023) or (E_subulatus_20753)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6787 , PWY-3101</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_DIHYDROKAEMPFEROL__45__CMPD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1F__45__90_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__1053" name="RXN1G-1053" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__delta19__45__3__45__oxo__45__C38__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__delta19__45__3__45__hydroxyC38__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__1084" name="RXN1G-1084" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft501_10a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_cis__45__delta19__45__3__45__hydroxyC38__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_trans__45__D2__45__cis__45__D19__45__C38__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__1435" name="6-O-mycolyl-trehalose-6-phosphate phosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18282) or (E_subulatus_14614) or (E_subulatus_24029) or (E_subulatus_04268) or (E_subulatus_04266) or (E_subulatus_24030) or (E_subulatus_13705) or (E_subulatus_04269) or (E_subulatus_01532) or (E_subulatus_04271) or (E_subulatus_04265) or (E_subulatus_18724) or (E_subulatus_04267) or (E_subulatus_01533) or (E_subulatus_13706) or (E_subulatus_01093) or (E_subulatus_24031) or (E_subulatus_01092) or (E_subulatus_02684) or (E_subulatus_00737) or (E_subulatus_09427) or (E_subulatus_04461) or (E_subulatus_20733) or (E_subulatus_01091) or (E_subulatus_04270)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1G__45__768_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1G__45__1344_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__1436" name="6-O-cis-methoxy-mycolyl-trehalose-6-phosphate phosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01091) or (E_subulatus_18282) or (E_subulatus_14614) or (E_subulatus_24029) or (E_subulatus_04266) or (E_subulatus_04268) or (E_subulatus_24030) or (E_subulatus_13705) or (E_subulatus_04269) or (E_subulatus_01532) or (E_subulatus_04265) or (E_subulatus_04271) or (E_subulatus_18724) or (E_subulatus_04267) or (E_subulatus_01533) or (E_subulatus_13706) or (E_subulatus_01093) or (E_subulatus_24031) or (E_subulatus_01092) or (E_subulatus_02684) or (E_subulatus_09427) or (E_subulatus_04461) or (E_subulatus_20733) or (E_subulatus_00737) or (E_subulatus_04270)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1G__45__771_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1G__45__1345_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__1437" name="6-O-trans-methoxy-mycolyl-trehalose-6-phosphate phosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18282) or (E_subulatus_14614) or (E_subulatus_24029) or (E_subulatus_04266) or (E_subulatus_04268) or (E_subulatus_20733) or (E_subulatus_24030) or (E_subulatus_13705) or (E_subulatus_04269) or (E_subulatus_01532) or (E_subulatus_04271) or (E_subulatus_04265) or (E_subulatus_18724) or (E_subulatus_01533) or (E_subulatus_13706) or (E_subulatus_01093) or (E_subulatus_24031) or (E_subulatus_01092) or (E_subulatus_02684) or (E_subulatus_00737) or (E_subulatus_09427) or (E_subulatus_04461) or (E_subulatus_04267) or (E_subulatus_01091) or (E_subulatus_04270)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1G__45__772_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1G__45__1346_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__1438" name="6-O-cis-keto-mycolyl-trehalose-6-phosphate phosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18282) or (E_subulatus_14614) or (E_subulatus_24029) or (E_subulatus_04266) or (E_subulatus_04268) or (E_subulatus_20733) or (E_subulatus_24030) or (E_subulatus_13705) or (E_subulatus_04269) or (E_subulatus_01532) or (E_subulatus_04271) or (E_subulatus_04265) or (E_subulatus_18724) or (E_subulatus_01533) or (E_subulatus_13706) or (E_subulatus_01093) or (E_subulatus_24031) or (E_subulatus_01092) or (E_subulatus_02684) or (E_subulatus_00737) or (E_subulatus_09427) or (E_subulatus_04461) or (E_subulatus_04267) or (E_subulatus_01091) or (E_subulatus_04270)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1G__45__773_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1G__45__1353_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__1439" name="6-O-trans-keto-mycolyl-trehalose-6-phosphate phosphohydrolase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01091) or (E_subulatus_18282) or (E_subulatus_14614) or (E_subulatus_24029) or (E_subulatus_04268) or (E_subulatus_04266) or (E_subulatus_24030) or (E_subulatus_13705) or (E_subulatus_04269) or (E_subulatus_01532) or (E_subulatus_04265) or (E_subulatus_04271) or (E_subulatus_18724) or (E_subulatus_04267) or (E_subulatus_01533) or (E_subulatus_13706) or (E_subulatus_01093) or (E_subulatus_24031) or (E_subulatus_01092) or (E_subulatus_02684) or (E_subulatus_09427) or (E_subulatus_04461) or (E_subulatus_20733) or (E_subulatus_00737) or (E_subulatus_04270)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD1G__45__774_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1G__45__1354_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__157" name="3-oxo-behenoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__behenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R__45__3__45__hydroxybehenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__163" name="RXN1G-163" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__delta11__45__3__45__oxo__45__melissoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__delta11__45__3__45__hydroxymelissoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__220" name="RXN1G-220" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft501_10a)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_cis__45__cis__45__D17__45__35__45__3__45__hydroxyC54__45__2__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_trans__45__D2__45__cis__45__cis__45__D17__45__35__45__C54__45__3__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__240" name="RXN1G-240" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__delta9__45__3__45__oxo__45__montanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__delta9__45__3__45__hydroxymontanoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__2527" name="cis,cis-&amp;Delta;19-37-C56:2-[acp] methyltransferase-hydroxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__cis__45__D19__45__37__45__C56__45__2__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__D19__45__37__45__OH__45__38__45__Me__45__C57__45__1__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__2544" name="cis-cyclopropane-&amp;Delta;19-37-hydroxy-38-methyl-C57:1-[acp] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_cis__45__D19__45__37__45__MOH__45__38__45__Me__45__C57__45__1__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__19__45__CP__45__37__45__Mex__45__38__45__Me__45__C59__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__260" name="RXN1G-260" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__delta13__45__3__45__oxo__45__lacceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__delta13__45__3__45__hydroxylacceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__287" name="RXN1G-287" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__delta21__45__3__45__oxo__45__C40__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__delta21__45__3__45__hydroxyC40__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__320" name="3-hydroxyarchidoyl-[acp] dehydrase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxyarachidoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_trans__45__delta2__45__arachidoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__3232" name="cis-&amp;Delta;19-37-hydroxy-38-methyl-C57:1-[acp] methylase/isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__D19__45__37__45__OH__45__38__45__Me__45__C57__45__1__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_trans__45__D18__45__37__45__OH__45__38__45__Me__45__C58__45__1__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__3256" name="trans-&amp;Delta;18-37-hydroxy-38-methyl-C58:1-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_trans__45__D18__45__37__45__MOH__45__38__45__Me__45__C58__45__1__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_trans__45__18__45__CP__45__37__45__Mex__45__38__45__Me__45__C60__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__349" name="3-oxoacyl-[acyl-carrier-protein] reductase (NADPH)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__arachidoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_R__45__3__45__hydroxyarachidoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__358" name="RXN1G-358" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__delta15__45__3__45__oxo__45__gheddoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__delta15__45__3__45__hydroxygheddoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__3613" name="cis,cis-&amp;Delta;21,39-C58:2-[acp] methyltransferase-hydroxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__cis__45__D21__45__39__45__C58__45__2__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__D21__45__39__45__OH__45__40__45__Me__45__C59__45__1__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__363" name="(R)-3-hydroxybehenoyl-[acp] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxybehenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_trans__45__delta2__45__behenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__364" name="RXN1G-364" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__delta7__45__3__45__oxo__45__cerotoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__delta7__45__3__45__hydroxycerotoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__3641" name="cis-&amp;Delta;21-39-hydroxy-40-methyl-C59:1-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_cis__45__D21__45__39__45__oxo__45__40__45__Me__45__C59__45__1__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__21__45__CP__45__39__45__keto__45__40__45__Me__45__C60__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__3667" name="trans-&amp;Delta;20-39-hydroxy-40-methyl-C60:1-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_trans__45__D20__45__39__45__oxo__45__40__45__Me__45__C60__45__1__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_trans__45__20__45__CP__45__22__45__Me__45__39__45__keto__45__40__45__Me__45__C61__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__368" name="3-oxo-arachidoyl-[acp] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Stearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__arachidoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__395" name="trans-eicos-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_trans__45__delta2__45__arachidoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Arachidoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__3993" name="C52-&amp;alpha;-meroacyl-[acp] synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_cis__45__cis__45__19__45__31__45__dicyclopropyl__45__C52__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1G__45__124_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__4140" name="cis-methoxy-C59-meroacyl-[acp] synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_cis__45__19__45__CP__45__37__45__Mex__45__38__45__Me__45__C59__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1G__45__204_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__4355" name="cerotoyl-CoA carboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_21382) or (E_subulatus_21383) or (E_subulatus_21385) or (E_subulatus_22034) or (E_subulatus_21386) or (E_subulatus_21387) or (E_subulatus_21384) or (E_subulatus_22033)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD1G__45__277_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HCO3_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD1G__45__332_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__445" name="3-oxo-behenoyl-[acp] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Arachidoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__behenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__45" name="cis,cis-&amp;Delta;19,31-C50:2-[acp] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_cis__45__cis__45__D19__45__31__45__C50__45__2__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__cis__45__19__45__31__45__dicyclopropyl__45__C52__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__460" name="3-oxoacyl-[acp] synthase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__9965_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__oxo__45__behenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__469" name="3-oxobehenoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__behenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R__45__3__45__hydroxybehenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__488" name="trans-docos-2-enoyl-[acyl-carrier protein] reductase (NADPH, B-specific)" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16467) or (E_subulatus_16469) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_trans__45__delta2__45__behenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Behenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__499" name="3-oxo-lignoceroyl-[acyl-carrier protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_MALONYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Behenoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__lignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__508" name="3-oxo-lignoceroyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15266) or (E_subulatus_15265)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_3__45__oxo__45__lignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R__45__3__45__hydroxylignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__517" name="3-hydroxylignoceroyl-[acyl-carrier protein] dehydratase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18602)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R__45__3__45__hydroxylignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_trans__45__delta2__45__lignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__526" name="trans-tetracos-2-enoyl-[acyl-carrier protein] reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18097) or (E_subulatus_16469) or (E_subulatus_16467) or (E_subulatus_16466) or (E_subulatus_16468) or (E_subulatus_24601)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_trans__45__delta2__45__lignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Lignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__72" name="RXN1G-72" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_cis__45__delta5__45__3__45__oxo__45__lignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__delta5__45__3__45__hydroxylignoceroyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1G__45__881" name="RXN1G-881" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWYG-321</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_cis__45__delta17__45__3__45__oxo__45__C36__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_cis__45__delta17__45__3__45__hydroxyC36__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN1K__45__87" name="RXN1K-87" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01642)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__787_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__786_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3DJ__45__11230" name="RXN3DJ-11230" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02588)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY3DJ-11470</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD3DJ__45__11366_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__292_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PHOSPHORYL__45__ETHANOLAMINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3DJ__45__118" name="RXN3DJ-118" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY3DJ-12</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__13612_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Long__45__Chain__45__Acyl__45__CoAs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD3DJ__45__82_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3DJ__45__170" name="5-hydroxy-L-tryptophan decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01359)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6030</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__HYDROXY__45__TRYPTOPHAN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SEROTONIN_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3O__45__178" name="SAM:C-24 sterol methyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_18134) or (E_subulatus_18116)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-6075</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_S__45__ADENOSYLMETHIONINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ZYMOSTEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ADENOSYL__45__HOMO__45__CYS_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_FECOSTEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3O__45__1803" name="3-oxoacyl-[acyl-carrier-protein] synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_13006) or (E_subulatus_13005) or (E_subulatus_22265) or (E_subulatus_13004) or (E_subulatus_22266) or (E_subulatus_08948)</p>
            <p>CATEGORIES: ORTHOLOGY and ANNOTATION</p>
            <p>SUBSYSTEM: PWY3O-355</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Palmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_MALONYL__45__ACP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__oxo__45__stearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3O__45__1983" name="RXN3O-1983" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-3081 , LYSINE-AMINOAD-PWY , P241-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_HOMO__45__CIT_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_HOMO__45__CIS__45__ACONITATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3O__45__218" name="RXN3O-218" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23561)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
            <p>SUBSYSTEM: PWY-2541 , PWY-6075</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_FERROCYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_EPISTEROL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__700_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_FERRICYTOCHROME__45__B5_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3O__45__328" name="4-hydroxysphinganine N-acyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_24462)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: SPHINGOLIPID-SYN-PWY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHYTOSPINGOSINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_VERY__45__LONG__45__CHAIN__45__FATTY__45__ACYL__45__COA_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Phytoceramides_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3O__45__4157" name="L-tyrosine:pyruvate aminotransferase" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_20406)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY3O-4108</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_TYR_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRUVATE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_P__45__HYDROXY__45__PHENYLPYRUVATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__ALPHA__45__ALANINE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3O__45__5293" name="RXN3O-5293" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY3O-355</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Octadec__45__2__45__enoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Stearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3O__45__5304" name="RXN3O-5304" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY3O-355</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Stearoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_STEAROYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN3O__45__9780" name="RXN3O-9780" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY-7746 , PWY-5994</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Palmitoyl__45__ACPs_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PALMITYL__45__COA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ACP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN490__45__3641" name="RXN490-3641" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_15475)</p>
            <p>CATEGORIES: ORTHOLOGY</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PRO_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_2__45__KETOGLUTARATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_OXYGEN__45__MOLECULE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_4__45__HYDROXY__45__L__45__PROLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_SUC_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__1" name="ethanol peroxidase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_08834) or (E_subulatus_13413) or (E_subulatus_13415) or (E_subulatus_13414) or (E_subulatus_08836) or (E_subulatus_08835) or (E_subulatus_08833)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-162</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ETOH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_HYDROGEN__45__PEROXIDE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_WATER_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ACETALD_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__162" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_17772) or (E_subulatus_23387) or (E_subulatus_23388)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-221</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__2750_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__2752_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__168" name="glucuronosyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_23387) or (E_subulatus_23388) or (E_subulatus_17772)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-221</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_UDP__45__GLUCURONATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__2742_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__2747_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_UDP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__221" name="dopa decarboxylase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_01359)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY-5426 , PWY66-301 , PWY-5403 , PWY-3581</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DIHYDROXY__45__PHENYLALANINE_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_DOPAMINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__25" name="cholestenol delta-isomerase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_02274)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-3</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__8621_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4186_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__281" name="squalene synthase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_00110) or (E_subulatus_00109)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__465_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_SQUALENE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__3" name="acetaldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03414) or (E_subulatus_00192) or (E_subulatus_18015) or (E_subulatus_03415) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-162 , PWY66-21 , PWY-7387 , PWY66-161</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_ACETALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
          <speciesReference species="M_ACET_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__318" name="RXN66-318" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft275_5)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY66-341 , PWY-6074</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__4702_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__4581_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CARBON__45__DIOXIDE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__319" name="zymosterol 3-dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY66-341 , PWY-6074</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__4581_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ZYMOSTEROL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__320" name="RXN66-320" reversible="true" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuFWS87_17)</p>
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY66-341 , PWY66-4</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_5__45__ALPHA__45__CHOLESTA__45__724__45__DIEN__45__3__45__BETA__45__OL_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_ZYMOSTEROL_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__336" name="obsolete gamma-glutamyltransferase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_06213) or (E_subulatus_10761)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-375</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Amino__45__Acids__45__20_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_LEUKOTRIENE__45__C4_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_5__45__L__45__GLUTAMYL__45__L__45__AMINO__45__ACID_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD66__45__21_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__469" name="3-methyl-branched fatty acyl-CoA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-387</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_3__45__Methyl__45__Saturated__45__Fatty__45__Acids_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_3__45__Methyl__45__Saturated__45__Fatty__45__Acyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__472" name="fatty aldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_03414) or (E_subulatus_00192) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-387</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__Me__45__Branched__45__234__45__Sat__45__FALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__Me__45__Branched__45__234__45__Sat__45__FA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__474" name="RXN66-474" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY66-388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_R2OH__45__Straight__45__Chain__45__234__45__Sat__45__FA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_R2__45__2OH__45__Straight__45__Chain__45__234__45__Sat__45__FA__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__476" name="fatty aldehyde dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_03414) or (E_subulatus_00192) or (E_subulatus_18015) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Odd__45__Straight__45__Chain__45__234__45__Sat__45__FALD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Odd__45__Straight__45__Chain__45__234__45__Sat__45__FA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__477" name="straight chain fatty acyl-CoA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-388</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_Odd__45__Straight__45__Chain__45__234__45__Sat__45__FA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Odd__45__Saturated__45__Fatty__45__Acyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__478" name="RXN66-478" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY66-389</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PHYTOL_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__14926_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__479" name="phytenal dehydrogenase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_03415) or (E_subulatus_18015) or (E_subulatus_03414) or (E_subulatus_00192) or (E_subulatus_20913) or (E_subulatus_00191) or (E_subulatus_02234) or (E_subulatus_14940) or (E_subulatus_14941) or (E_subulatus_23526) or (E_subulatus_25404) or (E_subulatus_20914) or (E_subulatus_20912)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-389</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14926_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14927_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__480" name="phytenoyl-CoA synthetase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-389</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14927_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14928_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__482" name="2-enoyl thioester reductase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_12766) or (E_subulatus_14382) or (E_subulatus_14381) or (E_subulatus_14383) or (E_subulatus_13413) or (E_subulatus_13415) or (E_subulatus_13414)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-389</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_CPD__45__14928_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NADPH_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_NADP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CPD__45__206_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__483" name="2-methyl branched fatty acid-CoA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_10153) or (E_subulatus_25484) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
            <p>SUBSYSTEM: PWY66-387</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_2__45__Me__45__Branched__45__234__45__Sat__45__FA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_2__45__Me__45__Branched__45__234__45__Sat__45__Fatty__45__Acyl__45__CoA_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__484" name="pristanoyl-CoA ligase" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_25484) or (E_subulatus_10153) or (E_subulatus_13209) or (E_subulatus_13210) or (E_subulatus_25485) or (E_subulatus_10154) or (E_subulatus_25482) or (E_subulatus_21799) or (E_subulatus_25483)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PRISTANATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_CO__45__A_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_ATP_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_CPD__45__14675_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PPI_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_AMP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__526" name="RXN66-526" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
            <p>SUBSYSTEM: PWY66-399</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_D__45__glucopyranose__45__6__45__phosphate_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_WATER_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Pi_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Glucopyranose_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__542" name="RXN66-542" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (EsuBft1784_2a)</p>
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PRO_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_Ubiquinones_c" stoichiometry="1" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_Ubiquinols_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_L__45__DELTA1__45__PYRROLINE_5__45__CARBOXYLATE_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__546" name="RXN66-546" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>GENE_ASSOCIATION: (E_subulatus_09568) or (E_subulatus_07520)</p>
            <p>CATEGORIES: ANNOTATION</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_NADH__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PYRROLINE__45__HYDROXY__45__CARBOXYLATE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_PROTON_c" stoichiometry="2" constant="false"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="M_4__45__HYDROXY__45__L__45__PROLINE_c" stoichiometry="1" constant="false"/>
          <speciesReference species="M_NAD__45__P__45__OR__45__NOP_c" stoichiometry="1" constant="false"/>
        </listOfProducts>
      </reaction>
      <reaction id="R_RXN66__45__548" name="RXN66-548" reversible="false" fast="false">
        <notes>
          <body xmlns="http://www.w3.org/1999/xhtml">
            <p>CATEGORIES: MANUAL</p>
          </body>
        </notes>
        <listOfReactants>
          <speciesReference species="M_PROTON_c" stoichiometry="3" constant="f