Difference between revisions of "RXN-14389"

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(Created page with "Category:reaction == Reaction ACYLCOADEHYDROG-RXN == * common-name: ** acyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8] * direction: **...")
 
(Created page with "Category:reaction == Reaction RXN-12198 == * common-name: ** cdp phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.6 ec-3.6.1.6] * direction: ** left-to-right...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ACYLCOADEHYDROG-RXN ==
+
== Reaction RXN-12198 ==
 
* common-name:
 
* common-name:
−
** acyl-coa dehydrogenase
+
** cdp phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8]
+
** [http://enzyme.expasy.org/EC/3.6.1.6 ec-3.6.1.6]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
 
−
** general acyl coa dehydrogenase
 
−
** medium-chain acyl-coenzyme a dehydrogenase
 
−
** fatty-acyl-coa dehydrogenase
 
−
** long-chain acyl-coa dehydrogenase
 
−
** long-chain acyl coenzyme a dehydrogenase
 
−
** acyl coenzyme a dehydrogenase
 
−
** fatty acyl coenzyme a dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
+
* 1 [[CDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[E_subulatus_25108]]
+
* Gene: [[E_subulatus_06847]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_25109]]
+
* Gene: [[E_subulatus_11023]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_12413]]
+
* Gene: [[E_subulatus_19874]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_17420]]
+
* Gene: [[E_subulatus_03480]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_25110]]
+
* Gene: [[E_subulatus_03479]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21544]]
+
* Gene: [[E_subulatus_19873]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_23466]]
+
* Gene: [[E_subulatus_19487]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_11080]]
+
* Gene: [[E_subulatus_19872]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19875]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* DB : LIGAND-RXN
−
* ID : P08503
+
* ID : R00514
−
{{#set: common-name=acyl-coa dehydrogenase}}
+
{{#set: common-name=cdp phosphatase}}
−
{{#set: ec-number=ec-1.3.8}}
+
{{#set: ec-number=ec-3.6.1.6}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=medium-chain acyl-coenzyme a dehydrogenase|long-chain acyl-coa dehydrogenase|fatty acyl coenzyme a dehydrogenase|general acyl coa dehydrogenase|fatty-acyl-coa dehydrogenase|long-chain acyl coenzyme a dehydrogenase|acyl coenzyme a dehydrogenase}}
+
{{#set: nb gene associated=9}}
−
{{#set: nb gene associated=8}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 18:01, 13 January 2021

Reaction RXN-12198

  • common-name:
    • cdp phosphatase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • DB : LIGAND-RXN
  • ID : R00514





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