Difference between revisions of "RXN-8761"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN66-483 == * common-name: ** 2-methyl branched fatty acid-coa ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] * dir...")
 
(Created page with "Category:reaction == Reaction 2OXOGLUTDECARB-RXN == * common-name: ** 2-oxoglutarate decarboxylase ** oxoglutarate dehydrogenase (succinyl-transferring) * ec-number: ** [h...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN66-483 ==
+
== Reaction 2OXOGLUTDECARB-RXN ==
 
* common-name:
 
* common-name:
−
** 2-methyl branched fatty acid-coa ligase
+
** 2-oxoglutarate decarboxylase
 +
** oxoglutarate dehydrogenase (succinyl-transferring)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.2.4.2 ec-1.2.4.2]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* synonymous:
 +
** oxoglutarate decarboxylase
 +
** 2-oxoglutarate decarboxylation
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-Me-Branched-234-Sat-FA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[2-Me-Branched-234-Sat-Fatty-Acyl-CoA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_21822]]
−
* Gene: [[E_subulatus_10153]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10154]]
+
* Gene: [[E_subulatus_23122]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_25484]]
+
* Gene: [[E_subulatus_23120]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_25483]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_25485]]
+
* Gene: [[E_subulatus_23121]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_13210]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_25482]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_21799]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_13209]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=2-methyl branched fatty acid-coa ligase}}
+
* DB : UNIPROT
−
{{#set: ec-number=ec-6.2.1.3}}
+
* ID : P23129
 +
{{#set: common-name=2-oxoglutarate decarboxylase|oxoglutarate dehydrogenase (succinyl-transferring)}}
 +
{{#set: ec-number=ec-1.2.4.2}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=9}}
+
{{#set: synonymous=oxoglutarate decarboxylase|2-oxoglutarate decarboxylation}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 18:02, 13 January 2021

Reaction 2OXOGLUTDECARB-RXN

  • common-name:
    • 2-oxoglutarate decarboxylase
    • oxoglutarate dehydrogenase (succinyl-transferring)
  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • oxoglutarate decarboxylase
    • 2-oxoglutarate decarboxylation

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

    • 10 reactions found over 11 reactions in the full pathway
    • 10 reactions found over 11 reactions in the full pathway
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • DB : UNIPROT
  • ID : P23129






Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=RXN-8761&oldid=19846"