Difference between revisions of "RXN-8098"
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(Created page with "Category:reaction == Reaction RXN-11923 == * direction: ** left-to-right == Reaction formula == * 1 DsrC-disulfide-form[c] '''+''' 1 HS[c] '''=>''' 1 DsrC-persul...") |
(Created page with "Category:reaction == Reaction DIAMINOPIMDECARB-RXN == * common-name: ** diaminopimelate decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.20 ec-4.1.1.20] *...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction DIAMINOPIMDECARB-RXN == |
| + | * common-name: | ||
| + | ** diaminopimelate decarboxylase | ||
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.1.1.20 ec-4.1.1.20] | ||
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[LYS]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| + | * Gene: [[E_subulatus_04926]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | * Gene: [[E_subulatus_04924]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[E_subulatus_04927]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | * Gene: [[E_subulatus_04925]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| − | ** ''' | + | ** '''6''' reactions found over '''9''' reactions in the full pathway |
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a |
| + | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * DB : UNIPROT | ||
| + | * ID : Q55484 | ||
| + | {{#set: common-name=diaminopimelate decarboxylase}} | ||
| + | {{#set: ec-number=ec-4.1.1.20}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
| − | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Revision as of 18:03, 13 January 2021
Contents
Reaction DIAMINOPIMDECARB-RXN
- common-name:
- diaminopimelate decarboxylase
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 MESO-DIAMINOPIMELATE[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 LYS[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_04926
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_04924
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_04927
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_04925
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- 6 reactions found over 9 reactions in the full pathway
- 6 reactions found over 9 reactions in the full pathway
- 6 reactions found over 7 reactions in the full pathway
- 6 reactions found over 7 reactions in the full pathway
- 6 reactions found over 9 reactions in the full pathway
- 6 reactions found over 9 reactions in the full pathway
- 7 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links
- DB : UNIPROT
- ID : Q55484
