Difference between revisions of "CYSTEINE--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-9535 == * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase ** β-ketomeristoyl-[acp] synthase * ec-number: ** [http://enzyme...")
 
(Created page with "Category:reaction == Reaction NADPH-DEHYDROGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.6.99.1 ec-1.6.99.1] * direction: ** reversible == Reaction formula...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-9535 ==
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== Reaction NADPH-DEHYDROGENASE-RXN ==
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* common-name:
 
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** 3-oxoacyl-[acyl-carrier-protein] synthase
 
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** β-ketomeristoyl-[acp] synthase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
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** [http://enzyme.expasy.org/EC/1.6.99.1 ec-1.6.99.1]
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** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
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** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
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** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* synonymous:
 
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** β-ketoacyl-acp synthase i
 
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** β-ketoacyl-acyl carrier protein synthetase
 
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** β-ketoacyl acyl carrier protein synthase
 
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** 3-oxoacyl-[acyl-carrier-protein] synthase
 
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** condensing enzyme
 
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** β-ketoacyl-[acyl carrier protein] synthase
 
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** acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating)
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[Dodecanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* 1 [[Acceptor]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[E_subulatus_04794]]
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* Gene: [[E_subulatus_22265]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[E_subulatus_15038]]
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* Gene: [[E_subulatus_02690]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[E_subulatus_13006]]
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* Gene: [[E_subulatus_04793]]
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_15037]]
 
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** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_08948]]
 
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** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_13004]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[E_subulatus_22266]]
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* Gene: [[E_subulatus_04795]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[E_subulatus_13005]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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** '''30''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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{{#set: common-name=&beta;-ketomeristoyl-[acp] synthase|3-oxoacyl-[acyl-carrier-protein] synthase}}
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* DB : RHEA
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{{#set: ec-number=ec-2.3.1.179|ec-2.3.1.86|ec-2.3.1.85|ec-2.3.1.41}}
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* ID : 13149
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{{#set: direction=left-to-right}}
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{{#set: ec-number=ec-1.6.99.1}}
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{{#set: synonymous=&beta;-ketoacyl-acyl carrier protein synthetase|&beta;-ketoacyl acyl carrier protein synthase|3-oxoacyl-[acyl-carrier-protein] synthase|&beta;-ketoacyl-acp synthase i|condensing enzyme|&beta;-ketoacyl-[acyl carrier protein] synthase|acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating)}}
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{{#set: direction=reversible}}
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{{#set: nb gene associated=8}}
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{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
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{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 18:04, 13 January 2021

Reaction NADPH-DEHYDROGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • DB : RHEA
  • ID : 13149





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