Difference between revisions of "BIOTINLIG-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RIBULP3EPIM-RXN == * common-name: ** ribulose-phosphate 3-epimerase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3.1 ec-5.1.3.1] * direct...") |
(Created page with "Category:reaction == Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN == * common-name: ** diphosphomevalonate decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1....") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** diphosphomevalonate decarboxylase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.1.1.33 ec-4.1.1.33] |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[CPD-641]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_21847]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_21846]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_21845]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | + | * Gene: [[E_subulatus_21848]] | |
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | |||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
− | *** Source: [[ | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | ** ''' | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
− | ** ''' | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
− | ** ''' | + | ** '''7''' reactions found over '''7''' reactions in the full pathway |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * DB : | + | * DB : UNIPROT |
− | * ID : | + | * ID : Q9U294 |
− | {{#set: common-name= | + | {{#set: common-name=diphosphomevalonate decarboxylase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-4.1.1.33}} |
− | {{#set: direction= | + | {{#set: direction=left-to-right}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Revision as of 18:05, 13 January 2021
Contents
Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN
- common-name:
- diphosphomevalonate decarboxylase
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 ATP[c] + 1 CPD-641[c] => 1 ADP[c] + 1 CARBON-DIOXIDE[c] + 1 DELTA3-ISOPENTENYL-PP[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_21847
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_21846
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_21845
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_21848
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- 7 reactions found over 8 reactions in the full pathway
- 7 reactions found over 8 reactions in the full pathway
- 7 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
External links
- DB : UNIPROT
- ID : Q9U294