Difference between revisions of "RXN-9000"

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(Created page with "Category:reaction == Reaction SAICARSYN-RXN == * common-name: ** phosphoribosylaminoimidazolesuccinocarboxamide synthase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.2...")
 
(Created page with "Category:reaction == Reaction KETOACYLCOATHIOL-RXN == * common-name: ** 3-ketoacyl-coa thiolase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16] * direct...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SAICARSYN-RXN ==
+
== Reaction KETOACYLCOATHIOL-RXN ==
 
* common-name:
 
* common-name:
−
** phosphoribosylaminoimidazolesuccinocarboxamide synthase
+
** 3-ketoacyl-coa thiolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.2.6 ec-6.3.2.6]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* synonymous:
 +
** beta-ketothiolase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_01454]]
+
* Gene: [[E_subulatus_19621]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_01456]]
+
* Gene: [[E_subulatus_19620]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_01455]]
+
* Gene: [[E_subulatus_06624]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19622]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* DB : UNIPROT
 
* DB : UNIPROT
−
* ID : Q9R7D5
+
* ID : Q42918
−
{{#set: common-name=phosphoribosylaminoimidazolesuccinocarboxamide synthase}}
+
{{#set: common-name=3-ketoacyl-coa thiolase}}
−
{{#set: ec-number=ec-6.3.2.6}}
+
{{#set: ec-number=ec-2.3.1.16}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=3}}
+
{{#set: synonymous=beta-ketothiolase}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 18:06, 13 January 2021

Reaction KETOACYLCOATHIOL-RXN

  • common-name:
    • 3-ketoacyl-coa thiolase
  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • beta-ketothiolase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

    • 5 reactions found over 5 reactions in the full pathway
    • 5 reactions found over 5 reactions in the full pathway
    • 5 reactions found over 7 reactions in the full pathway
    • 5 reactions found over 7 reactions in the full pathway
    • 3 reactions found over 5 reactions in the full pathway
    • 3 reactions found over 5 reactions in the full pathway
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • DB : UNIPROT
  • ID : Q42918






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