Difference between revisions of "RXN-9553"

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(Created page with "Category:reaction == Reaction RXN-10060 == * common-name: ** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph) * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1...")
 
(Created page with "Category:reaction == Reaction MALSYN-RXN == * common-name: ** malate synthase a * ec-number: ** [http://enzyme.expasy.org/EC/2.3.3.9 ec-2.3.3.9] * direction: ** left-to-ri...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10060 ==
+
== Reaction MALSYN-RXN ==
 
* common-name:
 
* common-name:
−
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
+
** malate synthase a
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/2.3.3.9 ec-2.3.3.9]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxycerotoyl-ACPs]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[GLYOX]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MAL]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_15265]]
+
* Gene: [[E_subulatus_18977]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_15266]]
+
* Gene: [[E_subulatus_07731]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_07730]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** '''8''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** '''8''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** '''43''' reactions found over '''182''' reactions in the full pathway
+
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7854]]:
 +
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 +
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
+
* DB : PIR
−
{{#set: ec-number=ec-1.1.1.100}}
+
* ID : S51788
 +
{{#set: common-name=malate synthase a}}
 +
{{#set: ec-number=ec-2.3.3.9}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=8}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 18:06, 13 January 2021

Reaction MALSYN-RXN

  • common-name:
    • malate synthase a
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

    • 2 reactions found over 8 reactions in the full pathway
    • 2 reactions found over 8 reactions in the full pathway
    • 10 reactions found over 12 reactions in the full pathway
    • 10 reactions found over 12 reactions in the full pathway
    • 10 reactions found over 11 reactions in the full pathway
    • 10 reactions found over 11 reactions in the full pathway
    • 1 reactions found over 7 reactions in the full pathway
    • 1 reactions found over 7 reactions in the full pathway
    • 4 reactions found over 6 reactions in the full pathway
    • 4 reactions found over 6 reactions in the full pathway
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7854:
    • 2 reactions found over n.a reactions in the full pathway
    • 2 reactions found over n.a reactions in the full pathway
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • DB : PIR
  • ID : S51788





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