Difference between revisions of "O-SUCCHOMOSERLYASE-RXN"

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(Created page with "Category:reaction == Reaction SPONTPRO-RXN == * direction: ** reversible == Reaction formula == * 1 L-DELTA1-PYRROLINE_5-CARBOXYLATE[c] '''+''' 1 PROTON[c] '''+'''...")
 
(Created page with "Category:reaction == Reaction RXN0-1461 == * common-name: ** coproporphyrinogen iii oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.3.3 ec-1.3.3.3] * direction: *...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SPONTPRO-RXN ==
+
== Reaction RXN0-1461 ==
 +
* common-name:
 +
** coproporphyrinogen iii oxidase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.3.3.3 ec-1.3.3.3]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
+
* 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_00323]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_00322]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_07854]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
+
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : RHEA
+
* DB : UNIPROT
−
* ID : 28234
+
* ID : O25824
−
{{#set: direction=reversible}}
+
{{#set: common-name=coproporphyrinogen iii oxidase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-1.3.3.3}}
−
{{#set: nb pathway associated=10}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb gene associated=3}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 18:06, 13 January 2021

Reaction RXN0-1461

  • common-name:
    • coproporphyrinogen iii oxidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

    • 5 reactions found over 9 reactions in the full pathway
    • 5 reactions found over 9 reactions in the full pathway
    • 5 reactions found over 4 reactions in the full pathway
    • 5 reactions found over 4 reactions in the full pathway
    • 4 reactions found over 4 reactions in the full pathway
    • 4 reactions found over 4 reactions in the full pathway
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • DB : UNIPROT
  • ID : O25824





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