Difference between revisions of "RXN-11474"

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(Created page with "Category:reaction == Reaction PHOSNACMURPENTATRANS-RXN == * common-name: ** udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecapreny...")
 
(Created page with "Category:reaction == Reaction SPONTPRO-RXN == * direction: ** reversible == Reaction formula == * 1 L-DELTA1-PYRROLINE_5-CARBOXYLATE[c] '''+''' 1 PROTON[c] '''+'''...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PHOSNACMURPENTATRANS-RXN ==
+
== Reaction SPONTPRO-RXN ==
−
* common-name:
 
−
** udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase
 
−
** phospho-n-acetylmuramoyl-pentapeptide-transferase
 
−
* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.7.8.13 ec-2.7.8.13]
 
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[C1]][c] '''+''' 1 [[CPD-9646]][c] '''=>''' 1 [[C5]][c] '''+''' 1 [[UMP]][c]
+
* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
== Pathway(s)  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[E_subulatus_01177]]
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* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
−
** Category: [[annotation]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* Gene: [[E_subulatus_01176]]
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
** Category: [[annotation]]
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
** '''1''' reactions found over '''10''' reactions in the full pathway
−
* Gene: [[E_subulatus_19937]]
+
** '''1''' reactions found over '''10''' reactions in the full pathway
−
** Category: [[annotation]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* Gene: [[E_subulatus_06885]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** Category: [[annotation]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* Gene: [[E_subulatus_18806]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** Category: [[annotation]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* Gene: [[E_subulatus_18805]]
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
** Category: [[annotation]]
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* Gene: [[E_subulatus_06884]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** Category: [[annotation]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_19936]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_18807]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
</div>
 
</div>
−
== Pathway(s)  ==
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* DB : RHEA
−
* ID : P37585
+
* ID : 28234
−
{{#set: common-name=phospho-n-acetylmuramoyl-pentapeptide-transferase|udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase}}
+
{{#set: direction=reversible}}
−
{{#set: ec-number=ec-2.7.8.13}}
+
{{#set: nb gene associated=0}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=10}}
−
{{#set: nb gene associated=9}}
+
{{#set: reconstruction category=manual}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=esub_adding_annot_form}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=ectocarpus_subulatus}}
 

Revision as of 18:06, 13 January 2021

Reaction SPONTPRO-RXN

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • 1 L-DELTA1-PYRROLINE_5-CARBOXYLATE[c] + 1 PROTON[c] + 1 WATER[c] <=> 1 L-GLUTAMATE_GAMMA-SEMIALDEHYDE[c]
    • 4 reactions found over 4 reactions in the full pathway
    • 4 reactions found over 4 reactions in the full pathway
    • 4 reactions found over 6 reactions in the full pathway
    • 4 reactions found over 6 reactions in the full pathway
    • 1 reactions found over 10 reactions in the full pathway
    • 1 reactions found over 10 reactions in the full pathway
    • 2 reactions found over 5 reactions in the full pathway
    • 2 reactions found over 5 reactions in the full pathway
    • 6 reactions found over 7 reactions in the full pathway
    • 6 reactions found over 7 reactions in the full pathway
    • 4 reactions found over 4 reactions in the full pathway
    • 4 reactions found over 4 reactions in the full pathway
    • 8 reactions found over 8 reactions in the full pathway
    • 8 reactions found over 8 reactions in the full pathway
    • 3 reactions found over 9 reactions in the full pathway
    • 3 reactions found over 9 reactions in the full pathway
    • 5 reactions found over 5 reactions in the full pathway
    • 5 reactions found over 5 reactions in the full pathway
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • DB : RHEA
  • ID : 28234




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