Difference between revisions of "3.6.3.6-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction MALATE-DEH-RXN == * common-name: ** malate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.37 ec-1.1.1.37] * direction: ** r...")
 
(Created page with "Category:reaction == Reaction RXN-15006 == * common-name: ** n-acetyl-gamma-glutamyl-phosphate reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.38 ec-1.2.1.38]...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction MALATE-DEH-RXN ==
+
== Reaction RXN-15006 ==
 
* common-name:
 
* common-name:
−
** malate dehydrogenase
+
** n-acetyl-gamma-glutamyl-phosphate reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.37 ec-1.1.1.37]
+
** [http://enzyme.expasy.org/EC/1.2.1.38 ec-1.2.1.38]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* synonymous:
 
−
** malate dehydrogenation
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[LysW-L-glutamate-5-phosphate]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[LysW-L-glutamate-5-semialdehyde]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_21320]]
−
* Gene: [[E_subulatus_23250]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_23249]]
+
* Gene: [[E_subulatus_21324]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_23247]]
+
* Gene: [[E_subulatus_21323]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21352]]
+
* Gene: [[E_subulatus_20194]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_25574]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_21322]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_23246]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_23248]]
+
* Gene: [[E_subulatus_21321]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
** '''5''' reactions found over '''12''' reactions in the full pathway
 
−
** '''5''' reactions found over '''12''' reactions in the full pathway
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
** '''8''' reactions found over '''10''' reactions in the full pathway
 
−
** '''8''' reactions found over '''10''' reactions in the full pathway
 
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
** '''10''' reactions found over '''16''' reactions in the full pathway
 
−
** '''10''' reactions found over '''16''' reactions in the full pathway
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
** '''12''' reactions found over '''18''' reactions in the full pathway
 
−
** '''12''' reactions found over '''18''' reactions in the full pathway
 
−
** '''6''' reactions found over '''4''' reactions in the full pathway
 
−
** '''6''' reactions found over '''4''' reactions in the full pathway
 
−
** '''13''' reactions found over '''13''' reactions in the full pathway
 
−
** '''13''' reactions found over '''13''' reactions in the full pathway
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : PIR
+
{{#set: common-name=n-acetyl-gamma-glutamyl-phosphate reductase}}
−
* ID : T51311
+
{{#set: ec-number=ec-1.2.1.38}}
−
{{#set: common-name=malate dehydrogenase}}
+
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.1.1.37}}
+
{{#set: nb gene associated=6}}
−
{{#set: direction=reversible}}
+
{{#set: nb pathway associated=1}}
−
{{#set: synonymous=malate dehydrogenation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb gene associated=7}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: nb pathway associated=20}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 18:06, 13 January 2021

Reaction RXN-15006

  • common-name:
    • n-acetyl-gamma-glutamyl-phosphate reductase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=3.6.3.6-RXN&oldid=20820"