Difference between revisions of "HOMOCYSMETB12-RXN"

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(Created page with "Category:reaction == Reaction LYSINE--TRNA-LIGASE-RXN == * common-name: ** lysine—trna ligase ** lysine-trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1....")
(Created page with "Category:reaction == Reaction GLUCONATE-5-DEHYDROGENASE-RXN == * common-name: ** 5-keto-d-gluconate 5-reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.69 ec-1....")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction LYSINE--TRNA-LIGASE-RXN ==
+
== Reaction GLUCONATE-5-DEHYDROGENASE-RXN ==
 
* common-name:
 
* common-name:
** lysine—trna ligase
+
** 5-keto-d-gluconate 5-reductase
** lysine-trna ligase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.1.1.6 ec-6.1.1.6]
+
** [http://enzyme.expasy.org/EC/1.1.1.69 ec-1.1.1.69]
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[LYS-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-LYS-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[GLUCONATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''<=>''' 1 [[5-DEHYDROGLUCONATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_17329]]
* Gene: [[E_subulatus_18715]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[E_subulatus_15900]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_18716]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_16816]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_18713]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_18712]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_18714]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[IDNCAT-PWY]], L-idonate degradation:
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* DB : UNIPROT
+
* METANETX-RXN : MNXR115916
* ID : P56126
+
* RHEA:
{{#set: common-name=lysine-trna ligase|lysine&mdash;trna ligase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23938 23938]
{{#set: ec-number=ec-6.1.1.6}}
+
* LIGAND-RXN:
{{#set: direction=left-to-right}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01740 R01740]
{{#set: nb gene associated=7}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P50199 P50199]
 +
{{#set: common-name=5-keto-d-gluconate 5-reductase}}
 +
{{#set: ec-number=ec-1.1.1.69}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 15:14, 15 March 2021

Reaction GLUCONATE-5-DEHYDROGENASE-RXN

  • common-name:
    • 5-keto-d-gluconate 5-reductase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • IDNCAT-PWY, L-idonate degradation:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links