Difference between revisions of "PHYTANATE--COA-LIGASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction GLUTAMIN-RXN == * common-name: ** glutaminase ** asparagine synthase (glutamine-hydrolyzing) ** imidazoleglycerol-phosphate synthase * ec-num...")
(Created page with "Category:reaction == Reaction KETOLACTOSE-RXN == * common-name: ** 3-ketolactose hydrolase ** beta-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMIN-RXN ==
+
== Reaction KETOLACTOSE-RXN ==
 
* common-name:
 
* common-name:
−
** glutaminase
+
** 3-ketolactose hydrolase
−
** asparagine synthase (glutamine-hydrolyzing)
+
** beta-galactosidase
−
** imidazoleglycerol-phosphate synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.38 ec-3.5.1.38]
+
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
−
** [http://enzyme.expasy.org/EC/3.5.1.2 ec-3.5.1.2]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[3-KETOLACTOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1242]][c] '''+''' 1 [[Glucopyranose]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_00877]]
−
* Gene: [[E_subulatus_22039]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_15542]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_18250]]
+
* Gene: [[E_subulatus_18607]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_11888]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_09215]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_02875]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_18595]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_06838]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_02876]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_06834]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02877]]
+
* Gene: [[E_subulatus_14852]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_13550]]
+
* Gene: [[E_subulatus_14853]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_09532]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_22802]]
+
* Gene: [[E_subulatus_07881]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_00581]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_11886]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_11884]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_09531]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_06835]]
+
* Gene: [[E_subulatus_00876]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_09214]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_06837]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_22040]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_15541]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00580]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_09216]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_06836]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_22870]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_12825]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_02874]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_11885]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_11887]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[LACTOSEUTIL-PWY]], lactose degradation II:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : LIGAND-RXN
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* ID : R00256
+
* METANETX-RXN : MNXR105374
−
{{#set: common-name=imidazoleglycerol-phosphate synthase|glutaminase|asparagine synthase (glutamine-hydrolyzing)}}
+
* RHEA:
−
{{#set: ec-number=ec-3.5.1.2|ec-3.5.1.38}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33788 33788]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04783 R04783]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P06219 P06219]
 +
** [http://www.uniprot.org/uniprot/P11175 P11175]
 +
** [http://www.uniprot.org/uniprot/P19668 P19668]
 +
** [http://www.uniprot.org/uniprot/P20043 P20043]
 +
** [http://www.uniprot.org/uniprot/P16278 P16278]
 +
** [http://www.uniprot.org/uniprot/P23780 P23780]
 +
** [http://www.uniprot.org/uniprot/P24131 P24131]
 +
** [http://www.uniprot.org/uniprot/Q02603 Q02603]
 +
** [http://www.uniprot.org/uniprot/Q53790 Q53790]
 +
** [http://www.uniprot.org/uniprot/P23989 P23989]
 +
** [http://www.uniprot.org/uniprot/P48982 P48982]
 +
** [http://www.uniprot.org/uniprot/Q9UYG5 Q9UYG5]
 +
** [http://www.uniprot.org/uniprot/Q02604 Q02604]
 +
** [http://www.uniprot.org/uniprot/P0AC73 P0AC73]
 +
** [http://www.uniprot.org/uniprot/O58247 O58247]
 +
** [http://www.uniprot.org/uniprot/Q9UYH2 Q9UYH2]
 +
** [http://www.uniprot.org/uniprot/P00722 P00722]
 +
** [http://www.uniprot.org/uniprot/P06864 P06864]
 +
** [http://www.uniprot.org/uniprot/Q47170 Q47170]
 +
** [http://www.uniprot.org/uniprot/Q59140 Q59140]
 +
** [http://www.uniprot.org/uniprot/P00723 P00723]
 +
** [http://www.uniprot.org/uniprot/P94248 P94248]
 +
** [http://www.uniprot.org/uniprot/O31341 O31341]
 +
** [http://www.uniprot.org/uniprot/P22498 P22498]
 +
** [http://www.uniprot.org/uniprot/Q02401 Q02401]
 +
** [http://www.uniprot.org/uniprot/P26257 P26257]
 +
** [http://www.uniprot.org/uniprot/Q59422 Q59422]
 +
** [http://www.uniprot.org/uniprot/P30812 P30812]
 +
** [http://www.uniprot.org/uniprot/Q12660 Q12660]
 +
** [http://www.uniprot.org/uniprot/P45582 P45582]
 +
** [http://www.uniprot.org/uniprot/P49676 P49676]
 +
** [http://www.uniprot.org/uniprot/Q9SCV3 Q9SCV3]
 +
** [http://www.uniprot.org/uniprot/Q9SZI5 Q9SZI5]
 +
** [http://www.uniprot.org/uniprot/O81100 O81100]
 +
** [http://www.uniprot.org/uniprot/Q42150 Q42150]
 +
** [http://www.uniprot.org/uniprot/P48980 P48980]
 +
** [http://www.uniprot.org/uniprot/P48981 P48981]
 +
** [http://www.uniprot.org/uniprot/O86616 O86616]
 +
** [http://www.uniprot.org/uniprot/P70753 P70753]
 +
** [http://www.uniprot.org/uniprot/P29853 P29853]
 +
** [http://www.uniprot.org/uniprot/P94804 P94804]
 +
</div>
 +
{{#set: common-name=3-ketolactose hydrolase|beta-galactosidase}}
 +
{{#set: ec-number=ec-3.2.1.23}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=31}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:14, 15 March 2021

Reaction KETOLACTOSE-RXN

  • common-name:
    • 3-ketolactose hydrolase
    • beta-galactosidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • LACTOSEUTIL-PWY, lactose degradation II:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=PHYTANATE--COA-LIGASE-RXN&oldid=29647"