Difference between revisions of "ORNDECARBOX-RXN"

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(Created page with "Category:reaction == Reaction UGD-RXN == * common-name: ** udp-glucose 6-dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.22 ec-1.1.1.22] * direction: ** l...")
(Created page with "Category:reaction == Reaction CYTIKIN-RXN == * direction: ** left-to-right * ec_number: ** ec-2.7.1.aw == Reaction formula == * 1 ATP[c] '''+''' 1 CYTIDINE[c] '''=...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction UGD-RXN ==
+
== Reaction CYTIKIN-RXN ==
* common-name:
 
** udp-glucose 6-dehydrogenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.1.22 ec-1.1.1.22]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-2.7.1.aw
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-12575]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[UDP-GLUCURONATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CYTIDINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_03749]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[PWY-7193]], pyrimidine ribonucleosides salvage I:
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-7820]]:
+
* [[PWY-5532]], nucleoside and nucleotide degradation (archaea):
** '''2''' reactions found over '''n.a''' reactions in the full pathway
+
** '''1''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* DB : RHEA
+
* METANETX-RXN : MNXR97041
* ID : 23596
+
* RHEA:
{{#set: common-name=udp-glucose 6-dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24675 24675]
{{#set: ec-number=ec-1.1.1.22}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00513 R00513]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=1}}
+
{{#set: ec_number=ec-2.7.1.aw}}
 +
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=annotation}}
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=esub_adding_annot_form}}

Revision as of 15:16, 15 March 2021

Reaction CYTIKIN-RXN

  • direction:
    • left-to-right
  • ec_number:
    • ec-2.7.1.aw

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7193, pyrimidine ribonucleosides salvage I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5532, nucleoside and nucleotide degradation (archaea):
    • 1 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR97041
  • RHEA:
  • LIGAND-RXN: