Difference between revisions of "RXN-7569"

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(Created page with "Category:reaction == Reaction RXN-7676 == * common-name: ** chlorophyllide-a monooxygenase ** chlorophyllide a oxygenase [overall] * direction: ** left-to-right * synonymo...")
(Created page with "Category:reaction == Reaction GUANYLCYC-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.6.1.2 ec-4.6.1.2] * direction: ** left-to-right == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7676 ==
+
== Reaction GUANYLCYC-RXN ==
−
* common-name:
+
* ec-number:
−
** chlorophyllide-a monooxygenase
+
** [http://enzyme.expasy.org/EC/4.6.1.2 ec-4.6.1.2]
−
** chlorophyllide a oxygenase [overall]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
 
−
** chlorophyllide a oxygenase
 
−
** chlorophyll-b synthase
 
−
** cao
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-7015]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[GTP]][c] '''=>''' 1 [[CGMP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[E_subulatus_16615]]
+
* Gene: [[E_subulatus_08935]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_14079]]
+
* Gene: [[E_subulatus_03275]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_03343]]
+
* Gene: [[E_subulatus_08936]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_15639]]
+
* Gene: [[E_subulatus_17731]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_16614]]
+
* Gene: [[E_subulatus_08937]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_03342]]
+
* Gene: [[E_subulatus_17732]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_07455]]
+
* Gene: [[E_subulatus_15892]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_14078]]
+
* Gene: [[E_subulatus_19745]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_06698]]
+
* Gene: [[E_subulatus_03276]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_12888]]
+
* Gene: [[E_subulatus_05951]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_16061]]
+
* Gene: [[E_subulatus_17726]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_12890]]
+
* Gene: [[E_subulatus_03277]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_20083]]
+
* Gene: [[E_subulatus_08934]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_15638]]
+
* Gene: [[E_subulatus_17728]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_12889]]
+
* Gene: [[E_subulatus_17729]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_07456]]
+
* Gene: [[E_subulatus_17730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19743]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13162]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19744]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_14467]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_17727]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15893]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : RHEA
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* ID : 22676
+
* METANETX-RXN : MNXR100463
−
{{#set: common-name=chlorophyllide-a monooxygenase|chlorophyllide a oxygenase [overall]}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13665 13665]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00434 R00434]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P51840 P51840]
 +
** [http://www.uniprot.org/uniprot/Q24051 Q24051]
 +
** [http://www.uniprot.org/uniprot/P51842 P51842]
 +
** [http://www.uniprot.org/uniprot/P51839 P51839]
 +
** [http://www.uniprot.org/uniprot/P51841 P51841]
 +
** [http://www.uniprot.org/uniprot/O02740 O02740]
 +
** [http://www.uniprot.org/uniprot/Q02846 Q02846]
 +
** [http://www.uniprot.org/uniprot/Q07093 Q07093]
 +
** [http://www.uniprot.org/uniprot/P16068 P16068]
 +
** [http://www.uniprot.org/uniprot/P19687 P19687]
 +
** [http://www.uniprot.org/uniprot/P16066 P16066]
 +
** [http://www.uniprot.org/uniprot/P20594 P20594]
 +
** [http://www.uniprot.org/uniprot/P25092 P25092]
 +
** [http://www.uniprot.org/uniprot/P18293 P18293]
 +
** [http://www.uniprot.org/uniprot/P19686 P19686]
 +
** [http://www.uniprot.org/uniprot/P20595 P20595]
 +
** [http://www.uniprot.org/uniprot/P22717 P22717]
 +
** [http://www.uniprot.org/uniprot/P16067 P16067]
 +
** [http://www.uniprot.org/uniprot/P18910 P18910]
 +
** [http://www.uniprot.org/uniprot/P16065 P16065]
 +
** [http://www.uniprot.org/uniprot/P11528 P11528]
 +
** [http://www.uniprot.org/uniprot/Q7M058 Q7M058]
 +
** [http://www.uniprot.org/uniprot/Q02153 Q02153]
 +
** [http://www.uniprot.org/uniprot/Q02108 Q02108]
 +
** [http://www.uniprot.org/uniprot/Q9TS82 Q9TS82]
 +
** [http://www.uniprot.org/uniprot/P55203 P55203]
 +
** [http://www.uniprot.org/uniprot/Q09435 Q09435]
 +
** [http://www.uniprot.org/uniprot/P55205 P55205]
 +
** [http://www.uniprot.org/uniprot/O57480 O57480]
 +
</div>
 +
{{#set: ec-number=ec-4.6.1.2}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=chlorophyllide a oxygenase|chlorophyll-b synthase|cao}}
+
{{#set: nb gene associated=22}}
−
{{#set: nb gene associated=16}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:17, 15 March 2021

Reaction GUANYLCYC-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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