Difference between revisions of "Transport biomass"

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(Created page with "Category:reaction == Reaction NUCLEOSIDE-PHOSPHATE-KINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.4 ec-2.7.4.4] * direction: ** left-to-right == Reaction...")
(Created page with "Category:reaction == Reaction RXN-1501_METACYC18.5 == * direction: ** left-to-right == Reaction formula == * 1.0 PHOSPHATIDYLCHOLINE[c] '''+''' 1.0 WATER[c] '''=>'...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction NUCLEOSIDE-PHOSPHATE-KINASE-RXN ==
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== Reaction RXN-1501_METACYC18.5 ==
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.7.4.4 ec-2.7.4.4]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[Nucleoside-Monophosphates]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Nucleoside-Diphosphates]][c]
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* 1.0 [[PHOSPHATIDYLCHOLINE]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[2-Lysophosphatidylcholines]][c] '''+''' 1.0 [[LINOLENIC_ACID]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_14023]]
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* Gene: [[Ec-04_004650]]
** Category: [[annotation]]
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** Category: [[manual]]
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[cyc_reactions_to_add]], Tool: [[unknown-tool]], Assignment: n.a, Comment: reaction from metacyc 18.5 to produce linolenic_acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic_acid compound class only
* Gene: [[E_subulatus_14022]]
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* Gene: [[Ec-21_005150]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[cyc_reactions_to_add]], Tool: [[unknown-tool]], Assignment: n.a, Comment: reaction from metacyc 18.5 to produce linolenic_acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic_acid compound class only
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[cyc_reactions_to_add]]; tool: [[curation]]; comment: reaction from metacyc 18.5 to produce linolenic_acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic_acid compound class only
 
== External links  ==
 
== External links  ==
* DB : LIGAND-RXN
 
* ID : R00334
 
{{#set: ec-number=ec-2.7.4.4}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=reaction from metacyc 18.5 to produce linolenic_acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic_acid compound class only}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=cyc_reactions_to_add}}

Revision as of 15:19, 15 March 2021

Reaction RXN-1501_METACYC18.5

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

  • Gene: Ec-04_004650
    • Category: manual
      • Source: cyc_reactions_to_add, Tool: unknown-tool, Assignment: n.a, Comment: reaction from metacyc 18.5 to produce linolenic_acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic_acid compound class only
  • Gene: Ec-21_005150
    • Category: manual
      • Source: cyc_reactions_to_add, Tool: unknown-tool, Assignment: n.a, Comment: reaction from metacyc 18.5 to produce linolenic_acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic_acid compound class only

Pathway(s)

Reconstruction information

  • category: manual; source: cyc_reactions_to_add; tool: curation; comment: reaction from metacyc 18.5 to produce linolenic_acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic_acid compound class only

External links