Difference between revisions of "GTP-CYCLOHYDRO-I-RXN"

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(Created page with "Category:reaction == Reaction RXN-10947 == * common-name: ** phosphatidylinositol-3,4-bisphosphate 3-phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.67 ec-3...")
(Created page with "Category:reaction == Reaction PYRIDOXKIN-RXN == * common-name: ** pyridoxal kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2.7.1.35] * direction: ** left-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10947 ==
+
== Reaction PYRIDOXKIN-RXN ==
 
* common-name:
 
* common-name:
−
** phosphatidylinositol-3,4-bisphosphate 3-phosphatase
+
** pyridoxal kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.67 ec-3.1.3.67]
+
** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2.7.1.35]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1108]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[PYRIDOXAL]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_15371]]
+
* Gene: [[E_subulatus_04123]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II:
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants):
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : LIGAND-RXN
+
* METANETX-RXN : MNXR103361
−
* ID : R06875
+
* RHEA:
−
{{#set: common-name=phosphatidylinositol-3,4-bisphosphate 3-phosphatase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10225 10225]
−
{{#set: ec-number=ec-3.1.3.67}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00174 R00174]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q7M2L1 Q7M2L1]
 +
** [http://www.uniprot.org/uniprot/P44690 P44690]
 +
** [http://www.uniprot.org/uniprot/P77150 P77150]
 +
{{#set: common-name=pyridoxal kinase}}
 +
{{#set: ec-number=ec-2.7.1.35}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 15:19, 15 March 2021

Reaction PYRIDOXKIN-RXN

  • common-name:
    • pyridoxal kinase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II:
    • 6 reactions found over 10 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants):
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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