Difference between revisions of "RXN1F-93"

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(Created page with "Category:reaction == Reaction ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN == * common-name: ** aspartate-semialdehyde dehydrogenase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction RXN-9520 == * common-name: ** (3r)-3-hydroxyhexanoyl-[acyl-carrier protein] dehydratase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN ==
+
== Reaction RXN-9520 ==
 
* common-name:
 
* common-name:
−
** aspartate-semialdehyde dehydrogenase
+
** (3r)-3-hydroxyhexanoyl-[acyl-carrier protein] dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.11 ec-1.2.1.11]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[L-BETA-ASPARTYL-P]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[R-3-hydroxyhexanoyl-ACPs]][c] '''=>''' 1 [[Hex-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_21320]]
+
* Gene: [[E_subulatus_15038]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_18602]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_21324]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21322]]
+
* Gene: [[E_subulatus_15037]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21321]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_21323]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5971]], palmitate biosynthesis (type II fatty acid synthase):
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
** '''30''' reactions found over '''31''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''30''' reactions found over '''31''' reactions in the full pathway
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7977]]:
 
−
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 
−
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR122848
−
* ID : P26511
+
{{#set: common-name=(3r)-3-hydroxyhexanoyl-[acyl-carrier protein] dehydratase}}
−
{{#set: common-name=aspartate-semialdehyde dehydrogenase}}
+
{{#set: ec-number=ec-4.2.1.59|ec-2.3.1.85|ec-2.3.1.86}}
−
{{#set: ec-number=ec-1.2.1.11}}
+
{{#set: direction=left-to-right}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=11}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:19, 15 March 2021

Reaction RXN-9520

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis (type II fatty acid synthase):
    • 30 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 30 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122848

Property "Common-name" (as page type) with input value "(3r)-3-hydroxyhexanoyl-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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