Difference between revisions of "RXN-16559"

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(Created page with "Category:reaction == Reaction RXN-9520 == * common-name: ** (3r)-3-hydroxyhexanoyl-[acyl-carrier protein] dehydratase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86...")
(Created page with "Category:reaction == Reaction GCVMULTI-RXN == * direction: ** reversible == Reaction formula == * 1 GLY[c] '''+''' 1 NAD[c] '''+''' 1 THF-GLU-N[c] '''<=>''' 1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9520 ==
+
== Reaction GCVMULTI-RXN ==
* common-name:
 
** (3r)-3-hydroxyhexanoyl-[acyl-carrier protein] dehydratase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[R-3-hydroxyhexanoyl-ACPs]][c] '''=>''' 1 [[Hex-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[GLY]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_15038]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_18602]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_15037]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-3841]], folate transformations II (plants):
** '''30''' reactions found over '''31''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
** '''30''' reactions found over '''31''' reactions in the full pathway
+
* [[PWY-181]], photorespiration:
** '''30''' reactions found over '''31''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I:
 +
** '''12''' reactions found over '''10''' reactions in the full pathway
 +
* [[1CMET2-PWY]], folate transformations III (E. coli):
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
{{#set: common-name=(3r)-3-hydroxyhexanoyl-[acyl-carrier protein] dehydratase}}
+
* METANETX-RXN : MNXR115907
{{#set: ec-number=ec-2.3.1.86|ec-2.3.1.85|ec-4.2.1.59}}
+
* RHEA:
{{#set: direction=left-to-right}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27761 27761]
{{#set: nb gene associated=3}}
+
* LIGAND-RXN:
{{#set: nb pathway associated=2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01221 R01221]
{{#set: reconstruction category=annotation}}
+
{{#set: direction=reversible}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction comment=n.a}}
+
{{#set: nb pathway associated=4}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Revision as of 15:20, 15 March 2021

Reaction GCVMULTI-RXN

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3841, folate transformations II (plants):
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-181, photorespiration:
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-2201, folate transformations I:
    • 12 reactions found over 10 reactions in the full pathway
  • 1CMET2-PWY, folate transformations III (E. coli):
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115907
  • RHEA:
  • LIGAND-RXN: