Difference between revisions of "RXN-4021"

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(Created page with "Category:reaction == Reaction R08184 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-10279[c] '''+''' 1.0 WATER[c] '''=>''' 1.0 CO-A[c] '''+'...")
(Created page with "Category:reaction == Reaction 2.8.1.6-RXN == * common-name: ** biotin synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1.6 ec-2.8.1.6] * direction: ** left-to-rig...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction R08184 ==
+
== Reaction 2.8.1.6-RXN ==
 +
* common-name:
 +
** biotin synthase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.8.1.6 ec-2.8.1.6]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[CPD-10279]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[CO-A]][c] '''+''' 1.0 [[DOCOSANOATE]][c]
+
* 1 [[DETHIOBIOTIN]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 1 [[BIOTIN]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_02357]]
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** Category: [[annotation]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[kegg_reactions_to_add]]; tool: [[curation]]; comment: reaction from kegg for the production of docosanoate
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR115224
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22061 22061]
 +
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7]
 +
** [http://www.uniprot.org/uniprot/Q9PLZ3 Q9PLZ3]
 +
** [http://www.uniprot.org/uniprot/P53557 P53557]
 +
** [http://www.uniprot.org/uniprot/O67104 O67104]
 +
** [http://www.uniprot.org/uniprot/P44987 P44987]
 +
** [http://www.uniprot.org/uniprot/Q58692 Q58692]
 +
** [http://www.uniprot.org/uniprot/P0A506 P0A506]
 +
** [http://www.uniprot.org/uniprot/Q9Z6L5 Q9Z6L5]
 +
** [http://www.uniprot.org/uniprot/Q9JUE3 Q9JUE3]
 +
** [http://www.uniprot.org/uniprot/P46396 P46396]
 +
** [http://www.uniprot.org/uniprot/Q47862 Q47862]
 +
** [http://www.uniprot.org/uniprot/P19206 P19206]
 +
** [http://www.uniprot.org/uniprot/P32451 P32451]
 +
** [http://www.uniprot.org/uniprot/P54967 P54967]
 +
** [http://www.uniprot.org/uniprot/P46715 P46715]
 +
** [http://www.uniprot.org/uniprot/P73538 P73538]
 +
** [http://www.uniprot.org/uniprot/P12996 P12996]
 +
** [http://www.uniprot.org/uniprot/O59778 O59778]
 +
</div>
 +
{{#set: common-name=biotin synthase}}
 +
{{#set: ec-number=ec-2.8.1.6}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=reaction from kegg for the production of docosanoate}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=kegg_reactions_to_add}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:20, 15 March 2021

Reaction 2.8.1.6-RXN

  • common-name:
    • biotin synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=RXN-4021&oldid=31000"