Difference between revisions of "RXN-14023"

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(Created page with "Category:reaction == Reaction 4.2.1.61-RXN == * common-name: ** (3r)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase * ec-number: ** [http://enzyme.expasy.org/EC/2.3...")
(Created page with "Category:reaction == Reaction RXN-12440 == * common-name: ** l-ascorbate peroxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.11.1.11 ec-1.11.1.11] * direction: ** le...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 4.2.1.61-RXN ==
+
== Reaction RXN-12440 ==
 
* common-name:
 
* common-name:
−
** (3r)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase
+
** l-ascorbate peroxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/1.11.1.11 ec-1.11.1.11]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
−
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
 
−
** β-hydroxypalmityl-acp dehydrase
 
−
** (3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
 
−
** β-hydroxypalmitoyl-acyl carrier protein dehydrase
 
−
** β-hydroxypalmitoyl thioester dehydratase
 
−
** (3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
 
−
** d-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[R-3-Hydroxypalmitoyl-ACPs]][c] '''=>''' 1 [[2-Hexadecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_18602]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_16649]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_15037]]
+
* Gene: [[E_subulatus_04124]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_15038]]
+
* Gene: [[E_subulatus_04125]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_04126]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16650]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_08513]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_17484]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic):
−
** '''30''' reactions found over '''31''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
** '''30''' reactions found over '''31''' reactions in the full pathway
+
* [[PWY-6959]], L-ascorbate degradation V:
−
** '''30''' reactions found over '''31''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6960]], L-ascorbate degradation III:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR140261
−
* ID : P07149
+
* RHEA:
−
{{#set: common-name=(3r)-3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22997 22997]
−
{{#set: ec-number=ec-2.3.1.86|ec-2.3.1.85|ec-4.2.1.59}}
+
{{#set: common-name=l-ascorbate peroxidase}}
 +
{{#set: ec-number=ec-1.11.1.11}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=&beta;-hydroxypalmitoyl-acyl carrier protein dehydrase|&beta;-hydroxypalmitoyl thioester dehydratase|&beta;-hydroxypalmityl-acp dehydrase|(3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase|d-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase|(3r)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)}}
+
{{#set: nb gene associated=7}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=2}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:21, 15 March 2021

Reaction RXN-12440

  • common-name:
    • l-ascorbate peroxidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6961, L-ascorbate degradation II (bacterial, aerobic):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6959, L-ascorbate degradation V:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6960, L-ascorbate degradation III:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR140261
  • RHEA:





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