Difference between revisions of "RXN-16628"
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(Created page with "Category:reaction == Reaction IGPSYN-RXN == * common-name: ** indole-3-glycerol-phosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.48 ec-4.1.1.48] * dir...") |
(Created page with "Category:reaction == Reaction IGPSYN-RXN == * common-name: ** indole-3-glycerol-phosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.48 ec-4.1.1.48] * dir...") |
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Line 28: | Line 28: | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * | + | * [[TRPSYN-PWY]], L-tryptophan biosynthesis: |
** '''6''' reactions found over '''6''' reactions in the full pathway | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
Line 34: | Line 34: | ||
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | * | + | * METANETX-RXN : MNXR100814 |
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23477 23477] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03508 R03508] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P42393 P42393] | ||
+ | ** [http://www.uniprot.org/uniprot/P20577 P20577] | ||
+ | ** [http://www.uniprot.org/uniprot/P18304 P18304] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06121 Q06121] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9V1G3 Q9V1G3] | ||
+ | ** [http://www.uniprot.org/uniprot/P20578 P20578] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PI11 Q9PI11] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58328 Q58328] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JSN4 Q9JSN4] | ||
+ | ** [http://www.uniprot.org/uniprot/P03964 P03964] | ||
+ | ** [http://www.uniprot.org/uniprot/P00910 P00910] | ||
+ | ** [http://www.uniprot.org/uniprot/P00909 P00909] | ||
+ | ** [http://www.uniprot.org/uniprot/P00911 P00911] | ||
+ | ** [http://www.uniprot.org/uniprot/P17217 P17217] | ||
+ | ** [http://www.uniprot.org/uniprot/P20409 P20409] | ||
+ | ** [http://www.uniprot.org/uniprot/P00937 P00937] | ||
+ | ** [http://www.uniprot.org/uniprot/P00908 P00908] | ||
+ | ** [http://www.uniprot.org/uniprot/P05328 P05328] | ||
+ | ** [http://www.uniprot.org/uniprot/P06531 P06531] | ||
+ | ** [http://www.uniprot.org/uniprot/P18483 P18483] | ||
+ | ** [http://www.uniprot.org/uniprot/P25170 P25170] | ||
+ | ** [http://www.uniprot.org/uniprot/P26938 P26938] | ||
+ | ** [http://www.uniprot.org/uniprot/P24773 P24773] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01999 Q01999] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9YGB5 Q9YGB5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9S591 Q9S591] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X7C7 Q9X7C7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q92370 Q92370] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZFA7 Q9ZFA7] | ||
+ | ** [http://www.uniprot.org/uniprot/P94327 P94327] | ||
+ | </div> | ||
{{#set: common-name=indole-3-glycerol-phosphate synthase}} | {{#set: common-name=indole-3-glycerol-phosphate synthase}} | ||
{{#set: ec-number=ec-4.1.1.48}} | {{#set: ec-number=ec-4.1.1.48}} | ||
Line 42: | Line 78: | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Revision as of 15:21, 15 March 2021
Contents
Reaction IGPSYN-RXN
- common-name:
- indole-3-glycerol-phosphate synthase
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 INDOLE-3-GLYCEROL-P[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_22809
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_22810
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_21178
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_18124
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_18125
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- TRPSYN-PWY, L-tryptophan biosynthesis:
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
External links