Difference between revisions of "GLYOHMETRANS-RXN"

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(Created page with "Category:reaction == Reaction RXN-13403 == * common-name: ** uroporphyrinogen-iii c-methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.107 ec-2.1.1.107]...")
(Created page with "Category:reaction == Reaction METHYLMALONYL-COA-MUT-RXN == * common-name: ** methylmalonyl-coa mutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.99.2 ec-5.4.99.2] *...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13403 ==
+
== Reaction METHYLMALONYL-COA-MUT-RXN ==
 
* common-name:
 
* common-name:
−
** uroporphyrinogen-iii c-methyltransferase
+
** methylmalonyl-coa mutase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.107 ec-2.1.1.107]
+
** [http://enzyme.expasy.org/EC/5.4.99.2 ec-5.4.99.2]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] '''=>''' 2 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIHYDROSIROHYDROCHLORIN]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[METHYL-MALONYL-COA]][c] '''<=>''' 1 [[SUC-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_20205]]
+
* Gene: [[E_subulatus_15374]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PROPIONMET-PWY]], propanoyl CoA degradation I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[P108-PWY]], pyruvate fermentation to propanoate I:
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY0-43]], conversion of succinate to propanoate:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6728]], methylaspartate cycle:
 +
** '''12''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 +
** '''6''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 +
** '''9''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7854]], crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered):
 +
** '''2''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : RHEA
+
* METANETX-RXN : MNXR101661
−
* ID : 32459
+
* RHEA:
−
{{#set: common-name=uroporphyrinogen-iii c-methyltransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22891 22891]
−
{{#set: ec-number=ec-2.1.1.107}}
+
* LIGAND-RXN:
−
{{#set: direction=left-to-right}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00833 R00833]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q05064 Q05064]
 +
** [http://www.uniprot.org/uniprot/P22033 P22033]
 +
** [http://www.uniprot.org/uniprot/Q05065 Q05065]
 +
** [http://www.uniprot.org/uniprot/O74009 O74009]
 +
** [http://www.uniprot.org/uniprot/Q9YBB0 Q9YBB0]
 +
** [http://www.uniprot.org/uniprot/Q9V0E8 Q9V0E8]
 +
** [http://www.uniprot.org/uniprot/Q9RV41 Q9RV41]
 +
** [http://www.uniprot.org/uniprot/O28068 O28068]
 +
** [http://www.uniprot.org/uniprot/Q59676 Q59676]
 +
** [http://www.uniprot.org/uniprot/Q59677 Q59677]
 +
** [http://www.uniprot.org/uniprot/P11652 P11652]
 +
** [http://www.uniprot.org/uniprot/P11653 P11653]
 +
** [http://www.uniprot.org/uniprot/P16332 P16332]
 +
{{#set: common-name=methylmalonyl-coa mutase}}
 +
{{#set: ec-number=ec-5.4.99.2}}
 +
{{#set: direction=reversible}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=8}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:21, 15 March 2021

Reaction METHYLMALONYL-COA-MUT-RXN

  • common-name:
    • methylmalonyl-coa mutase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PROPIONMET-PWY, propanoyl CoA degradation I:
    • 3 reactions found over 3 reactions in the full pathway
  • P108-PWY, pyruvate fermentation to propanoate I:
    • 4 reactions found over 7 reactions in the full pathway
  • PWY0-43, conversion of succinate to propanoate:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial):
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-6728, methylaspartate cycle:
    • 12 reactions found over 19 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle:
    • 6 reactions found over 13 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
    • 9 reactions found over 18 reactions in the full pathway
  • PWY-7854, crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered):
    • 2 reactions found over 14 reactions in the full pathway

Reconstruction information

External links





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