Difference between revisions of "KETOACYLCOATHIOL-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction GLYCINE--TRNA-LIGASE-RXN == * common-name: ** glycine-trna ligase ** glycine—trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6...")
(Created page with "Category:reaction == Reaction RXN-1106 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.44 ec-1.2.1.44] * direction: ** left-to-right == Reaction formula == * 1 FER...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction GLYCINE--TRNA-LIGASE-RXN ==
+
== Reaction RXN-1106 ==
* common-name:
 
** glycine-trna ligase
 
** glycine—trna ligase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.1.1.14 ec-6.1.1.14]
+
** [http://enzyme.expasy.org/EC/1.2.1.44 ec-1.2.1.44]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[GLY-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLY-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[FERULOYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CONIFERYL-ALDEHYDE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_03226]]
+
* Gene: [[E_subulatus_03281]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[E_subulatus_15126]]
+
* Gene: [[E_subulatus_14571]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_08480]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-361]], phenylpropanoid biosynthesis:
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-6027]], capsiconiate biosynthesis:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* DB : UNIPROT
+
* METANETX-RXN : MNXR107366
* ID : Q9JW67
+
* LIGAND-RXN:
{{#set: common-name=glycine—trna ligase|glycine-trna ligase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02193 R02193]
{{#set: ec-number=ec-6.1.1.14}}
+
{{#set: ec-number=ec-1.2.1.44}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Revision as of 15:21, 15 March 2021

Reaction RXN-1106

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-361, phenylpropanoid biosynthesis:
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-6027, capsiconiate biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107366
  • LIGAND-RXN: