Difference between revisions of "RXN-1106"
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(Created page with "Category:reaction == Reaction RXN-10060 == * common-name: ** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph) * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1...") |
(Created page with "Category:reaction == Reaction PROPIONYL-COA-CARBOXY-RXN == * common-name: ** propionyl-coa carboxylase * ec-number: ** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3] * d...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction PROPIONYL-COA-CARBOXY-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** propionyl-coa carboxylase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3] |
* direction: | * direction: | ||
− | ** | + | ** reversible |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[E_subulatus_21387]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_21385]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
+ | * Gene: [[E_subulatus_21382]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_21383]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_21386]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_22033]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_22034]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_21384]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * | + | * [[PROPIONMET-PWY]], propanoyl CoA degradation I: |
− | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
− | ** ''' | + | * [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): |
− | ** ''' | + | ** '''8''' reactions found over '''10''' reactions in the full pathway |
+ | * [[PWY-6728]], methylaspartate cycle: | ||
+ | ** '''12''' reactions found over '''19''' reactions in the full pathway | ||
+ | * [[PWY-5743]], 3-hydroxypropanoate cycle: | ||
+ | ** '''6''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: | ||
+ | ** '''9''' reactions found over '''18''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: common-name= | + | * METANETX-RXN : MNXR103100 |
− | {{#set: ec-number=ec- | + | * RHEA: |
− | {{#set: direction= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23723 23723] |
− | {{#set: nb gene associated= | + | * LIGAND-RXN: |
− | {{#set: nb pathway associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0] | ||
+ | ** [http://www.uniprot.org/uniprot/P07633 P07633] | ||
+ | ** [http://www.uniprot.org/uniprot/P05165 P05165] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06101 Q06101] | ||
+ | ** [http://www.uniprot.org/uniprot/Q20676 Q20676] | ||
+ | ** [http://www.uniprot.org/uniprot/O24789 O24789] | ||
+ | {{#set: common-name=propionyl-coa carboxylase}} | ||
+ | {{#set: ec-number=ec-6.4.1.3}} | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: nb gene associated=8}} | ||
+ | {{#set: nb pathway associated=5}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=ectocarpus_subulatus}} | {{#set: reconstruction source=ectocarpus_subulatus}} |
Revision as of 15:21, 15 March 2021
Contents
Reaction PROPIONYL-COA-CARBOXY-RXN
- common-name:
- propionyl-coa carboxylase
- ec-number:
- direction:
- reversible
Reaction formula
- 1 ATP[c] + 1 HCO3[c] + 1 PROPIONYL-COA[c] <=> 1 ADP[c] + 1 D-METHYL-MALONYL-COA[c] + 1 PROTON[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_21387
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_21385
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_21382
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_21383
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_21386
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_22033
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_22034
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_21384
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PROPIONMET-PWY, propanoyl CoA degradation I:
- 3 reactions found over 3 reactions in the full pathway
- PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial):
- 8 reactions found over 10 reactions in the full pathway
- PWY-6728, methylaspartate cycle:
- 12 reactions found over 19 reactions in the full pathway
- PWY-5743, 3-hydroxypropanoate cycle:
- 6 reactions found over 13 reactions in the full pathway
- PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
- 9 reactions found over 18 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR103100
- RHEA:
- LIGAND-RXN:
- UNIPROT: