Difference between revisions of "RXNARA-8002"

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(Created page with "Category:reaction == Reaction DCTP-PYROPHOSPHATASE-RXN == * common-name: ** dctp pyrophosphohydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.9 ec-3.6.1.9] ** [...")
(Created page with "Category:reaction == Reaction RXN-13449 == * common-name: ** short-chain acyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8.1 ec-1.3.8.1] * directio...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DCTP-PYROPHOSPHATASE-RXN ==
+
== Reaction RXN-13449 ==
 
* common-name:
 
* common-name:
−
** dctp pyrophosphohydrolase
+
** short-chain acyl-coa dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.9 ec-3.6.1.9]
+
** [http://enzyme.expasy.org/EC/1.3.8.1 ec-1.3.8.1]
−
** [http://enzyme.expasy.org/EC/3.6.1.12 ec-3.6.1.12]
 
−
** [http://enzyme.expasy.org/EC/3.6.1.65 ec-3.6.1.65]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DCTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DCMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Short-Chain-234-Saturated-acyl-CoAs]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[Short-Chain-Trans-23-Dehydroacyl-CoA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_25109]]
−
* Gene: [[E_subulatus_16055]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_01318]]
+
* Gene: [[E_subulatus_25108]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_16056]]
+
* Gene: [[E_subulatus_25110]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02580]]
+
* Gene: [[E_subulatus_21544]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_16054]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16057]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16985]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7206]], pyrimidine deoxyribonucleotides dephosphorylation:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR97203
+
* METANETX-RXN : MNXR118089
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22637 22637]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=47197 47197]
−
* LIGAND-RXN:
+
{{#set: common-name=short-chain acyl-coa dehydrogenase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01668 R01668]
+
{{#set: ec-number=ec-1.3.8.1}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P39262 P39262]
 
−
{{#set: common-name=dctp pyrophosphohydrolase}}
 
−
{{#set: ec-number=ec-3.6.1.65|ec-3.6.1.12|ec-3.6.1.9}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=7}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:04, 17 March 2021

Reaction RXN-13449

  • common-name:
    • short-chain acyl-coa dehydrogenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR118089
  • RHEA:





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