Difference between revisions of "RXN-12507"

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(Created page with "Category:reaction == Reaction PYRROLINECARBDEHYDROG-RXN == * common-name: ** 1-pyrroline-5-carboxylate dehydrogenase * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:reaction == Reaction RXN-12570 == * common-name: ** 3-hydroxyacyl-coa dehydrogenase ** 3-hydroxyhexanoyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.o...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PYRROLINECARBDEHYDROG-RXN ==
+
== Reaction RXN-12570 ==
 
* common-name:
 
* common-name:
−
** 1-pyrroline-5-carboxylate dehydrogenase
+
** 3-hydroxyacyl-coa dehydrogenase
 +
** 3-hydroxyhexanoyl-coa dehydrogenase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[K-HEXANOYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[OH-HEXANOYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_00118]]
+
* Gene: [[E_subulatus_04640]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_00121]]
+
* Gene: [[E_subulatus_02116]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00117]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_00120]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_00116]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_00119]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered):
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR102301
+
* METANETX-RXN : MNXR100543
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16418 16418]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31144 31144]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00707 R00707]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04748 R04748]
−
* UNIPROT:
+
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase|3-hydroxyhexanoyl-coa dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
+
{{#set: ec-number=ec-1.1.1.35}}
−
** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
 
−
** [http://www.uniprot.org/uniprot/P09546 P09546]
 
−
** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
 
−
** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
 
−
** [http://www.uniprot.org/uniprot/O24897 O24897]
 
−
** [http://www.uniprot.org/uniprot/Q59426 Q59426]
 
−
** [http://www.uniprot.org/uniprot/P07275 P07275]
 
−
** [http://www.uniprot.org/uniprot/P10503 P10503]
 
−
** [http://www.uniprot.org/uniprot/P74275 P74275]
 
−
** [http://www.uniprot.org/uniprot/O74766 O74766]
 
−
** [http://www.uniprot.org/uniprot/P95629 P95629]
 
−
{{#set: common-name=1-pyrroline-5-carboxylate dehydrogenase}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 19:04, 17 March 2021

Reaction RXN-12570

  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase
    • 3-hydroxyhexanoyl-coa dehydrogenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6863, pyruvate fermentation to hexanol (engineered):
    • 6 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100543
  • RHEA:
  • LIGAND-RXN:





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