Difference between revisions of "PANTOTHENATE-KIN-RXN"

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(Created page with "Category:reaction == Reaction RXN490-3641 == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57] * direction: ** left-to-right * synonymous: ** prolyl h...")
(Created page with "Category:reaction == Reaction RXN-16137 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16] * direction: ** left-to-right == Reaction formula == * 1 CO...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN490-3641 ==
+
== Reaction RXN-16137 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
 
−
** prolyl hydroxylase
 
−
** proline hydroxylase
 
−
** prolyl 4-hydroxylase
 
−
** protocollagen hydroxylase
 
−
** proline,2-oxoglutarate 4-dioxygenase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-17388]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-17312]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_15475]]
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* Gene: [[E_subulatus_06624]]
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** Category: [[orthology]]
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** Category: [[annotation]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19620]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19621]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19622]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals):
 +
** '''14''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR103186
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=51509 51509]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07937 R07937]
−
{{#set: ec-number=ec-1.14.11.57}}
+
* METANETX-RXN : MNXR111520
 +
{{#set: ec-number=ec-2.3.1.16}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=prolyl hydroxylase|proline hydroxylase|prolyl 4-hydroxylase|protocollagen hydroxylase|proline,2-oxoglutarate 4-dioxygenase}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:05, 17 March 2021

Reaction RXN-16137

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals):
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR111520





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