Difference between revisions of "RXN-9663"

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(Created page with "Category:reaction == Reaction RXN0-5260 == * common_name: ** sn-glycerol 3-phosphate:ubiquinone oxidoreductase * direction: ** left-to-right * ec_number: ** ec-1.1.5.3 ==...")
(Created page with "Category:reaction == Reaction RXN-9951 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * common-name: ** isocitrate dehydrogenas...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-5260 ==
+
== Reaction RXN-9951 ==
−
* common_name:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** sn-glycerol 3-phosphate:ubiquinone oxidoreductase
+
* common-name:
 +
** isocitrate dehydrogenase (nadp+)
 +
** nadp-dependent isocitrate dehydrogenase
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* ec_number:
+
* synonymous:
−
** ec-1.1.5.3
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** dual-cofactor-specific isocitrate dehydrogenase
 +
** idp2
 +
** idp
 +
** nadp+-linked isocitrate dehydrogenase
 +
** nadp-dependent isocitric dehydrogenase
 +
** idh (ambiguous)
 +
** nadp+-idh
 +
** isocitrate (nadp) dehydrogenase
 +
** isocitrate dehydrogenase (nadp-dependent)
 +
** idp3
 +
** nadp isocitric dehydrogenase
 +
** nadp+-icdh
 +
** oxalsuccinic decarboxylase
 +
** nadp-linked isocitrate dehydrogenase
 +
** nadp-specific isocitrate dehydrogenase
 +
** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 +
** oxalosuccinate decarboxylase
 +
** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 +
** idp1
 +
</div>
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLYCEROL-3P]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[Ubiquinols]][c]
+
* 1 [[NADP]][c] '''+''' 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_13345]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1561]], glycerol-3-phosphate to cytochrome bo oxidase electron transfer:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6952]], glycerophosphodiester degradation:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-1584]], nitrate reduction X (dissimilatory, periplasmic):
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-4261]], glycerol degradation I:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6118]], glycerol-3-phosphate shuttle:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR123236
+
* METANETX-RXN : MNXR123084
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28756 28756]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25591 25591]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08657 R08657]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01899 R01899]
−
{{#set: common_name=sn-glycerol 3-phosphate:ubiquinone oxidoreductase}}
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{{#set: common-name=isocitrate dehydrogenase (nadp+)|nadp-dependent isocitrate dehydrogenase}}
−
{{#set: direction=left-to-right}}
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{{#set: direction=reversible}}
−
{{#set: ec_number=ec-1.1.5.3}}
+
{{#set: synonymous=dual-cofactor-specific isocitrate dehydrogenase|nadp-specific isocitrate dehydrogenase|nadp-dependent isocitric dehydrogenase|isocitrate dehydrogenase (nadp-dependent)|nadp isocitric dehydrogenase|idp1|nadp-linked isocitrate dehydrogenase|nadp+-idh|idp2|nadp+-icdh|isocitrate (nadp) dehydrogenase|idp|nadp+-linked isocitrate dehydrogenase|oxalsuccinic decarboxylase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|oxalosuccinate decarboxylase|idp3|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|idh (ambiguous)}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:05, 17 March 2021

Reaction RXN-9951

  • common-name:
    • isocitrate dehydrogenase (nadp+)
    • nadp-dependent isocitrate dehydrogenase
  • direction:
    • reversible
  • synonymous:
    • dual-cofactor-specific isocitrate dehydrogenase
    • idp2
    • idp
    • nadp+-linked isocitrate dehydrogenase
    • nadp-dependent isocitric dehydrogenase
    • idh (ambiguous)
    • nadp+-idh
    • isocitrate (nadp) dehydrogenase
    • isocitrate dehydrogenase (nadp-dependent)
    • idp3
    • nadp isocitric dehydrogenase
    • nadp+-icdh
    • oxalsuccinic decarboxylase
    • nadp-linked isocitrate dehydrogenase
    • nadp-specific isocitrate dehydrogenase
    • triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
    • oxalosuccinate decarboxylase
    • isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
    • idp1

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123084
  • RHEA:
  • LIGAND-RXN:





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