Difference between revisions of "RXN-12978"

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(Created page with "Category:reaction == Reaction RXN-5466 == * direction: ** left-to-right * ec_number: ** ec-2.4.1.258 == Reaction formula == * 1 CPD-171[c] '''+''' 1 CPD-5164[c] ''...")
(Created page with "Category:reaction == Reaction PMPOXI-RXN == * common-name: ** pyridoxamine 5'-phosphate oxidase ** pyridoxamine-phosphate oxidase * ec-number: ** [http://enzyme.expasy.org...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-5466 ==
+
== Reaction PMPOXI-RXN ==
 +
* common-name:
 +
** pyridoxamine 5'-phosphate oxidase
 +
** pyridoxamine-phosphate oxidase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.4.3.5 ec-1.4.3.5]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec_number:
 
−
** ec-2.4.1.258
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-171]][c] '''+''' 1 [[CPD-5164]][c] '''=>''' 1 [[CPD-5165]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_16935]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19533]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_09204]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_10527]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_22030]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19532]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19164]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_10528]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
+
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I:
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants):
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR121811
+
* METANETX-RXN : MNXR103355
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15818 15818]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06258 R06258]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277]
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29530 29530]
+
** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7]
 +
** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1]
 +
** [http://www.uniprot.org/uniprot/P44909 P44909]
 +
** [http://www.uniprot.org/uniprot/P38075 P38075]
 +
** [http://www.uniprot.org/uniprot/P74211 P74211]
 +
{{#set: common-name=pyridoxamine-phosphate oxidase|pyridoxamine 5'-phosphate oxidase}}
 +
{{#set: ec-number=ec-1.4.3.5}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec_number=ec-2.4.1.258}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
 

Revision as of 19:05, 17 March 2021

Reaction PMPOXI-RXN

  • common-name:
    • pyridoxamine 5'-phosphate oxidase
    • pyridoxamine-phosphate oxidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants):
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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