Difference between revisions of "3.6.3.41-RXN"

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(Created page with "Category:reaction == Reaction ExchangeSeed-FERROCYTOCHROME-B5 == * direction: ** reversible == Reaction formula == * 1.0 FERROCYTOCHROME-B5[C-BOUNDARY] '''<=>''' 1.0 [...")
(Created page with "Category:reaction == Reaction PNKIN-RXN == * common-name: ** pyridoxine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2.7.1.35] * direction: ** left-to-r...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ExchangeSeed-FERROCYTOCHROME-B5 ==
+
== Reaction PNKIN-RXN ==
 +
* common-name:
 +
** pyridoxine kinase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2.7.1.35]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[FERROCYTOCHROME-B5]][C-BOUNDARY] '''<=>''' 1.0 [[FERROCYTOCHROME-B5]][e]
+
* 1 [[ATP]][c] '''+''' 1 [[PYRIDOXINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXINE-5P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_04123]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II:
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants):
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR103362
−
{{#set: nb gene associated=0}}
+
* RHEA:
−
{{#set: nb pathway associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25109 25109]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction tool=curation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01909 R01909]
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: common-name=pyridoxine kinase}}
−
{{#set: reconstruction source=import_from_medium}}
+
{{#set: ec-number=ec-2.7.1.35}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 19:06, 17 March 2021

Reaction PNKIN-RXN

  • common-name:
    • pyridoxine kinase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II:
    • 6 reactions found over 10 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants):
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR103362
  • RHEA:
  • LIGAND-RXN:





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