Difference between revisions of "RXN-8098"

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(Created page with "Category:reaction == Reaction AMINOCYL-TRNA-HYDROLASE-RXN == * common-name: ** aminoacyl-trna hydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29]...")
(Created page with "Category:reaction == Reaction RXN-3521 == * common-name: ** l-ascorbate peroxidase * direction: ** left-to-right * synonymous: ** l-ascorbic acid peroxidase ** ascorbic ac...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AMINOCYL-TRNA-HYDROLASE-RXN ==
+
== Reaction RXN-3521 ==
 
* common-name:
 
* common-name:
−
** aminoacyl-trna hydrolase
+
** l-ascorbate peroxidase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* synonymous:
 +
** l-ascorbic acid peroxidase
 +
** ascorbic acid peroxidase
 +
** l-ascorbic acid-specific peroxidase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N-Substituted-Aminoacyl-tRNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-Substituted-Amino-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNAs]][c]
+
* 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[CPD-318]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[E_subulatus_02642]]
+
* Gene: [[E_subulatus_04126]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02644]]
+
* Gene: [[E_subulatus_16650]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_04209]]
+
* Gene: [[E_subulatus_16649]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21089]]
+
* Gene: [[E_subulatus_17484]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_04210]]
+
* Gene: [[E_subulatus_08513]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02643]]
+
* Gene: [[E_subulatus_04124]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21090]]
+
* Gene: [[E_subulatus_04125]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21088]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_21087]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-2261]], ascorbate glutathione cycle:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115700
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR139712
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R09540 R09540]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30266 30266]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9JV42 Q9JV42]
+
** [http://www.uniprot.org/uniprot/P48534 P48534]
−
** [http://www.uniprot.org/uniprot/P44682 P44682]
+
** [http://www.uniprot.org/uniprot/Q7M287 Q7M287]
−
** [http://www.uniprot.org/uniprot/Q9PII7 Q9PII7]
+
** [http://www.uniprot.org/uniprot/O49159 O49159]
−
** [http://www.uniprot.org/uniprot/Q9CJI1 Q9CJI1]
+
** [http://www.uniprot.org/uniprot/Q7M3G0 Q7M3G0]
−
** [http://www.uniprot.org/uniprot/P0A7D1 P0A7D1]
+
** [http://www.uniprot.org/uniprot/Q05431 Q05431]
−
** [http://www.uniprot.org/uniprot/Q59989 Q59989]
+
** [http://www.uniprot.org/uniprot/Q43824 Q43824]
−
{{#set: common-name=aminoacyl-trna hydrolase}}
+
** [http://www.uniprot.org/uniprot/Q41772 Q41772]
−
{{#set: ec-number=ec-3.1.1.29}}
+
** [http://www.uniprot.org/uniprot/Q41371 Q41371]
 +
** [http://www.uniprot.org/uniprot/Q42661 Q42661]
 +
** [http://www.uniprot.org/uniprot/Q42564 Q42564]
 +
** [http://www.uniprot.org/uniprot/O46921 O46921]
 +
** [http://www.uniprot.org/uniprot/P93404 P93404]
 +
** [http://www.uniprot.org/uniprot/Q9FE01 Q9FE01]
 +
** [http://www.uniprot.org/uniprot/O65634 O65634]
 +
** [http://www.uniprot.org/uniprot/Q39843 Q39843]
 +
** [http://www.uniprot.org/uniprot/O49122 O49122]
 +
** [http://www.uniprot.org/uniprot/O49822 O49822]
 +
** [http://www.uniprot.org/uniprot/Q42459 Q42459]
 +
** [http://www.uniprot.org/uniprot/Q39780 Q39780]
 +
** [http://www.uniprot.org/uniprot/Q96399 Q96399]
 +
** [http://www.uniprot.org/uniprot/O81333 O81333]
 +
** [http://www.uniprot.org/uniprot/O81603 O81603]
 +
** [http://www.uniprot.org/uniprot/O81604 O81604]
 +
** [http://www.uniprot.org/uniprot/Q42909 Q42909]
 +
** [http://www.uniprot.org/uniprot/Q9STM9 Q9STM9]
 +
</div>
 +
{{#set: common-name=l-ascorbate peroxidase}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=9}}
+
{{#set: synonymous=l-ascorbic acid-specific peroxidase|ascorbic acid peroxidase|l-ascorbic acid peroxidase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=7}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:06, 17 March 2021

Reaction RXN-3521

  • common-name:
    • l-ascorbate peroxidase
  • direction:
    • left-to-right
  • synonymous:
    • l-ascorbic acid peroxidase
    • ascorbic acid peroxidase
    • l-ascorbic acid-specific peroxidase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2261, ascorbate glutathione cycle:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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