Difference between revisions of "RXN-17622"

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(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN == * common-name: ** isoleucine transaminase * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6...")
(Created page with "Category:reaction == Reaction RXN-14796 == * common-name: ** acyl-coa oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6] * direction: ** left-to-righ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN ==
+
== Reaction RXN-14796 ==
 
* common-name:
 
* common-name:
−
** isoleucine transaminase
+
** acyl-coa oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[ILE]][c] '''<=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[CPD-15684]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-15685]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_07244]]
−
* Gene: [[E_subulatus_14594]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_07245]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_14595]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00115]]
+
* Gene: [[E_subulatus_11079]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_14596]]
+
* Gene: [[E_subulatus_07246]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_14599]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_14600]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_12552]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5104]], L-isoleucine biosynthesis IV:
+
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast):
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5108]], L-isoleucine biosynthesis V:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5101]], L-isoleucine biosynthesis II:
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5103]], L-isoleucine biosynthesis III:
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine):
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ILEUDEG-PWY]], L-isoleucine degradation I:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5078]], L-isoleucine degradation II:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR96228
+
* METANETX-RXN : MNXR118934
−
* RHEA:
+
{{#set: common-name=acyl-coa oxidase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24804 24804]
+
{{#set: ec-number=ec-1.3.3.6}}
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199]
+
{{#set: nb gene associated=4}}
−
* UNIPROT:
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P38891 P38891]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P47176 P47176]
 
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
 
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
 
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
 
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 
−
{{#set: common-name=isoleucine transaminase}}
 
−
{{#set: ec-number=ec-2.6.1.42}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=7}}
 
−
{{#set: nb pathway associated=7}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:06, 17 March 2021

Reaction RXN-14796

  • common-name:
    • acyl-coa oxidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast):
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR118934





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