Difference between revisions of "POLYNUCLEOTIDE-5-PHOSPHATASE-RXN"

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(Created page with "Category:reaction == Reaction GUANYL-KIN-RXN == * common-name: ** guanylate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.8 ec-2.7.4.8] * direction: ** reversi...")
(Created page with "Category:reaction == Reaction RXN66-221 == * common-name: ** dopa decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.28 ec-4.1.1.28] * direction: ** left-to-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GUANYL-KIN-RXN ==
+
== Reaction RXN66-221 ==
 
* common-name:
 
* common-name:
−
** guanylate kinase
+
** dopa decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.4.8 ec-2.7.4.8]
+
** [http://enzyme.expasy.org/EC/4.1.1.28 ec-4.1.1.28]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GMP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GDP]][c]
+
* 1 [[L-DIHYDROXY-PHENYLALANINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DOPAMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_20804]]
+
* Gene: [[E_subulatus_01359]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_17421]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis:
+
* [[PWY-5403]], betaxanthin biosynthesis (via dopamine):
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5426]], betaxanthin biosynthesis:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-301]], catecholamine biosynthesis:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3581]], (S)-reticuline biosynthesis I:
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR100144
+
* METANETX-RXN : MNXR107302
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12273 12273]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02080 R02080]
−
* UNIPROT:
+
{{#set: common-name=dopa decarboxylase}}
−
** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8]
+
{{#set: ec-number=ec-4.1.1.28}}
−
** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P44310 P44310]
+
{{#set: nb pathway associated=4}}
−
** [http://www.uniprot.org/uniprot/P15454 P15454]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P60546 P60546]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P31006 P31006]
 
−
** [http://www.uniprot.org/uniprot/P46195 P46195]
 
−
** [http://www.uniprot.org/uniprot/Q16774 Q16774]
 
−
** [http://www.uniprot.org/uniprot/P72648 P72648]
 
−
** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9]
 
−
** [http://www.uniprot.org/uniprot/Q9M681 Q9M681]
 
−
{{#set: common-name=guanylate kinase}}
 
−
{{#set: ec-number=ec-2.7.4.8}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:07, 17 March 2021

Reaction RXN66-221

  • common-name:
    • dopa decarboxylase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5403, betaxanthin biosynthesis (via dopamine):
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5426, betaxanthin biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY66-301, catecholamine biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-3581, (S)-reticuline biosynthesis I:
    • 3 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107302
  • RHEA:
  • LIGAND-RXN:





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