Difference between revisions of "GLYCOPHOSPHORYL-RXN"

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(Created page with "Category:reaction == Reaction RXN0-6491 == * common-name: ** dihydroorotate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.5.2 ec-1.3.5.2] * direction: **...")
(Created page with "Category:reaction == Reaction CYTIDEAM2-RXN == * common-name: ** cytidine deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.5 ec-3.5.4.5] * direction: ** left-t...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-6491 ==
+
== Reaction CYTIDEAM2-RXN ==
 
* common-name:
 
* common-name:
−
** dihydroorotate dehydrogenase
+
** cytidine deaminase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.5.2 ec-1.3.5.2]
+
** [http://enzyme.expasy.org/EC/3.5.4.5 ec-3.5.4.5]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[OROTATE]][c] '''+''' 1 [[Ubiquinols]][c]
+
* 1 [[CYTIDINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[URIDINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_06326]]
+
* Gene: [[E_subulatus_01214]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_06327]]
+
* Gene: [[E_subulatus_01215]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7193]], pyrimidine ribonucleosides salvage I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1295]], pyrimidine ribonucleosides degradation:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6556]], pyrimidine ribonucleosides salvage II:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR123304
+
* METANETX-RXN : MNXR97039
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28690 28690]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069]
−
{{#set: common-name=dihydroorotate dehydrogenase}}
+
* LIGAND-RXN:
−
{{#set: ec-number=ec-1.3.5.2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01878 R01878]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P47718 P47718]
 +
** [http://www.uniprot.org/uniprot/P0ABF6 P0ABF6]
 +
** [http://www.uniprot.org/uniprot/P47298 P47298]
 +
** [http://www.uniprot.org/uniprot/Q9CFM8 Q9CFM8]
 +
** [http://www.uniprot.org/uniprot/P32320 P32320]
 +
** [http://www.uniprot.org/uniprot/P75051 P75051]
 +
** [http://www.uniprot.org/uniprot/Q9SU87 Q9SU87]
 +
** [http://www.uniprot.org/uniprot/Q9SU86 Q9SU86]
 +
** [http://www.uniprot.org/uniprot/O65571 O65571]
 +
** [http://www.uniprot.org/uniprot/Q9S847 Q9S847]
 +
** [http://www.uniprot.org/uniprot/Q9S7L8 Q9S7L8]
 +
** [http://www.uniprot.org/uniprot/Q9S7S2 Q9S7S2]
 +
** [http://www.uniprot.org/uniprot/O65896 O65896]
 +
{{#set: common-name=cytidine deaminase}}
 +
{{#set: ec-number=ec-3.5.4.5}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:07, 17 March 2021

Reaction CYTIDEAM2-RXN

  • common-name:
    • cytidine deaminase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7193, pyrimidine ribonucleosides salvage I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1295, pyrimidine ribonucleosides degradation:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6556, pyrimidine ribonucleosides salvage II:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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