Difference between revisions of "RXN-1106"

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(Created page with "Category:reaction == Reaction PROPIONYL-COA-CARBOXY-RXN == * common-name: ** propionyl-coa carboxylase * ec-number: ** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3] * d...")
(Created page with "Category:reaction == Reaction RXN-14116 == * common-name: ** l-glutamate γ-semialdehyde dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.88 ec-1.2.1....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PROPIONYL-COA-CARBOXY-RXN ==
+
== Reaction RXN-14116 ==
 
* common-name:
 
* common-name:
−
** propionyl-coa carboxylase
+
** l-glutamate γ-semialdehyde dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3]
+
** [http://enzyme.expasy.org/EC/1.2.1.88 ec-1.2.1.88]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_00116]]
−
* Gene: [[E_subulatus_21387]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21385]]
+
* Gene: [[E_subulatus_00119]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21382]]
+
* Gene: [[E_subulatus_00117]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21383]]
+
* Gene: [[E_subulatus_00121]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21386]]
+
* Gene: [[E_subulatus_00118]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_22033]]
+
* Gene: [[E_subulatus_00120]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_22034]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_21384]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PROPIONMET-PWY]], propanoyl CoA degradation I:
+
* [[PROUT-PWY]], L-proline degradation I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6853]], ethene biosynthesis II (microbes):
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway):
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 
−
** '''8''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle:
 
−
** '''12''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 
−
** '''9''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR103100
+
* METANETX-RXN : MNXR103352
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00245 R00245]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23723 23723]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30236 30236]
−
* LIGAND-RXN:
+
{{#set: common-name=l-glutamate &gamma;-semialdehyde dehydrogenase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859]
+
{{#set: ec-number=ec-1.2.1.88}}
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0]
+
{{#set: nb gene associated=6}}
−
** [http://www.uniprot.org/uniprot/P07633 P07633]
+
{{#set: nb pathway associated=3}}
−
** [http://www.uniprot.org/uniprot/P05165 P05165]
 
−
** [http://www.uniprot.org/uniprot/Q06101 Q06101]
 
−
** [http://www.uniprot.org/uniprot/Q20676 Q20676]
 
−
** [http://www.uniprot.org/uniprot/O24789 O24789]
 
−
{{#set: common-name=propionyl-coa carboxylase}}
 
−
{{#set: ec-number=ec-6.4.1.3}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=8}}
 
−
{{#set: nb pathway associated=5}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:08, 17 March 2021

Reaction RXN-14116

  • common-name:
    • l-glutamate γ-semialdehyde dehydrogenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PROUT-PWY, L-proline degradation I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6853, ethene biosynthesis II (microbes):
    • 2 reactions found over 5 reactions in the full pathway
  • ARGASEDEG-PWY, L-arginine degradation I (arginase pathway):
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR103352
  • LIGAND-RXN:
  • RHEA:





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