Difference between revisions of "RXN-3443"

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(Created page with "Category:reaction == Reaction RXN-12263 == * common-name: ** presqualene diphosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.103 ec-2.5.1.103] * direct...")
(Created page with "Category:reaction == Reaction AMINEPHEN-RXN == * common-name: ** primary amine oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.3.21 ec-1.4.3.21] * direction: ** l...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12263 ==
+
== Reaction AMINEPHEN-RXN ==
 
* common-name:
 
* common-name:
−
** presqualene diphosphate synthase
+
** primary amine oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.103 ec-2.5.1.103]
+
** [http://enzyme.expasy.org/EC/1.4.3.21 ec-1.4.3.21]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD-465]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PHENYLETHYLAMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PHENYLACETALDEHYDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_00110]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_14646]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_14645]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19483]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_14644]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_00109]]
+
* Gene: [[E_subulatus_11639]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19482]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_11640]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_13120]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5875]], staphyloxanthin biosynthesis:
+
* [[2PHENDEG-PWY]], phenylethylamine degradation I:
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6767]], 4,4'-diapolycopenedioate biosynthesis:
+
* [[PWY-5751]], phenylethanol biosynthesis:
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6105]], botryococcenes and methylated squalene biosynthesis:
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7072]], hopanoid biosynthesis (bacteria):
 
−
** '''1''' reactions found over '''14''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* RHEA:
−
* METANETX-RXN : MNXR103264
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25266 25266]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00702 R00702]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02613 R02613]
−
* UNIPROT:
+
{{#set: common-name=primary amine oxidase}}
−
** [http://www.uniprot.org/uniprot/O69445 O69445]
+
{{#set: ec-number=ec-1.4.3.21}}
−
** [http://www.uniprot.org/uniprot/P36596 P36596]
 
−
** [http://www.uniprot.org/uniprot/O65688 O65688]
 
−
** [http://www.uniprot.org/uniprot/O23118 O23118]
 
−
** [http://www.uniprot.org/uniprot/O22107 O22107]
 
−
** [http://www.uniprot.org/uniprot/Q40472 Q40472]
 
−
** [http://www.uniprot.org/uniprot/O22106 O22106]
 
−
** [http://www.uniprot.org/uniprot/P53800 P53800]
 
−
** [http://www.uniprot.org/uniprot/P53799 P53799]
 
−
** [http://www.uniprot.org/uniprot/P53798 P53798]
 
−
** [http://www.uniprot.org/uniprot/P29704 P29704]
 
−
** [http://www.uniprot.org/uniprot/Q04903 Q04903]
 
−
** [http://www.uniprot.org/uniprot/Q42761 Q42761]
 
−
** [http://www.uniprot.org/uniprot/Q42760 Q42760]
 
−
** [http://www.uniprot.org/uniprot/P37268 P37268]
 
−
** [http://www.uniprot.org/uniprot/Q02769 Q02769]
 
−
</div>
 
−
{{#set: common-name=presqualene diphosphate synthase}}
 
−
{{#set: ec-number=ec-2.5.1.103}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
 
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 19:08, 17 March 2021

Reaction AMINEPHEN-RXN

  • common-name:
    • primary amine oxidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • 2PHENDEG-PWY, phenylethylamine degradation I:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5751, phenylethanol biosynthesis:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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