Difference between revisions of "TransportSeed-Light"
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(Created page with "Category:reaction == Reaction GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN == * common-name: ** galactosylceramide sulfotransferase * ec-number: ** [http://enzyme.expasy.org/EC...") |
(Created page with "Category:reaction == Reaction RXN-2541 == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.115 ec-2.5.1.115] * direction: ** left-to-right == Reaction formula == * 1 H...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN-2541 == |
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* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.5.1.115 ec-2.5.1.115] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[HOMOGENTISATE]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[MPBQ]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[EsuBft1250_2a]] | |
− | + | ** Category: [[manual]] | |
− | + | *** Source: [[esub_adding_annot_form]], Tool: [[unknown-tool]], Assignment: n.a, Comment: annotation | |
− | + | * Gene: [[E_subulatus_02597]] | |
− | + | ** Category: [[orthology]] | |
− | + | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
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− | * Gene: [[ | ||
− | ** Category: [[ | ||
− | *** Source: [[ | ||
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− | * Gene: [[ | ||
− | ** Category: [[ | ||
− | *** Source: [[ | ||
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== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-1422]], vitamin E biosynthesis (tocopherols): | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a |
+ | * category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | * METANETX-RXN : MNXR100629 |
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37976 37976] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07500 R07500] |
− | + | {{#set: ec-number=ec-2.5.1.115}} | |
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− | {{#set: ec-number=ec-2. | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=manual|orthology}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pantograph|curation}} |
− | {{#set: reconstruction comment=n.a}} | + | {{#set: reconstruction comment=annotation|n.a}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|esub_adding_annot_form}} |
Revision as of 19:08, 17 March 2021
Contents
Reaction RXN-2541
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 HOMOGENTISATE[c] + 1 PHYTYL-PYROPHOSPHATE[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 MPBQ[c] + 1 PPI[c]
Gene(s) associated with this reaction
- Gene: EsuBft1250_2a
- Category: manual
- Source: esub_adding_annot_form, Tool: unknown-tool, Assignment: n.a, Comment: annotation
- Category: manual
- Gene: E_subulatus_02597
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-1422, vitamin E biosynthesis (tocopherols):
- 7 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
- category: manual; source: esub_adding_annot_form; tool: curation; comment: annotation
External links