Difference between revisions of "DIHYDRODIPICSYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-15006 == * common-name: ** n-acetyl-gamma-glutamyl-phosphate reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.38 ec-1.2.1.38]...")
(Created page with "Category:reaction == Reaction PHOSNACMURPENTATRANS-RXN == * common-name: ** udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecapreny...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15006 ==
+
== Reaction PHOSNACMURPENTATRANS-RXN ==
 
* common-name:
 
* common-name:
−
** n-acetyl-gamma-glutamyl-phosphate reductase
+
** udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase
 +
** phospho-n-acetylmuramoyl-pentapeptide-transferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.38 ec-1.2.1.38]
+
** [http://enzyme.expasy.org/EC/2.7.8.13 ec-2.7.8.13]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[LysW-L-glutamate-5-phosphate]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[LysW-L-glutamate-5-semialdehyde]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[C1]][c] '''+''' 1 [[CPD-9646]][c] '''=>''' 1 [[C5]][c] '''+''' 1 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_21320]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_01177]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21324]]
+
* Gene: [[E_subulatus_01176]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21323]]
+
* Gene: [[E_subulatus_19937]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_20194]]
+
* Gene: [[E_subulatus_06885]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21322]]
+
* Gene: [[E_subulatus_18806]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_21321]]
+
* Gene: [[E_subulatus_18805]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_06884]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19936]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_18807]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaea):
+
* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing):
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR119069
+
* METANETX-RXN : MNXR109725
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=52670 52670]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28387 28387]
−
{{#set: common-name=n-acetyl-gamma-glutamyl-phosphate reductase}}
+
* LIGAND-RXN:
−
{{#set: ec-number=ec-1.2.1.38}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05630 R05630]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q55986 Q55986]
 +
** [http://www.uniprot.org/uniprot/P45062 P45062]
 +
** [http://www.uniprot.org/uniprot/Q03521 Q03521]
 +
** [http://www.uniprot.org/uniprot/O25235 O25235]
 +
** [http://www.uniprot.org/uniprot/Q9JSZ3 Q9JSZ3]
 +
** [http://www.uniprot.org/uniprot/Q9PI72 Q9PI72]
 +
** [http://www.uniprot.org/uniprot/P37585 P37585]
 +
** [http://www.uniprot.org/uniprot/P0A6W3 P0A6W3]
 +
{{#set: common-name=phospho-n-acetylmuramoyl-pentapeptide-transferase|udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase}}
 +
{{#set: ec-number=ec-2.7.8.13}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=9}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 19:08, 17 March 2021

Reaction PHOSNACMURPENTATRANS-RXN

  • common-name:
    • udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase
    • phospho-n-acetylmuramoyl-pentapeptide-transferase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PEPTIDOGLYCANSYN-PWY, peptidoglycan biosynthesis I (meso-diaminopimelate containing):
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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