Difference between revisions of "HOMOCYSMETB12-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction GLUCONATE-5-DEHYDROGENASE-RXN == * common-name: ** 5-keto-d-gluconate 5-reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.69 ec-1....")
(Created page with "Category:reaction == Reaction HOMOCYSMETB12-RXN == * common-name: ** methionine synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13] * direction: **...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUCONATE-5-DEHYDROGENASE-RXN ==
+
== Reaction HOMOCYSMETB12-RXN ==
 
* common-name:
 
* common-name:
−
** 5-keto-d-gluconate 5-reductase
+
** methionine synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.69 ec-1.1.1.69]
+
** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLUCONATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''<=>''' 1 [[5-DEHYDROGLUCONATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[HOMO-CYS]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[THF-GLU-N]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_17329]]
+
* Gene: [[E_subulatus_08517]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_03439]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[IDNCAT-PWY]], L-idonate degradation:
+
* [[PWY-2201]], folate transformations I:
 +
** '''12''' reactions found over '''10''' reactions in the full pathway
 +
* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[1CMET2-PWY]], folate transformations III (E. coli):
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7977]], L-methionine biosynthesis IV:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II (plants):
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[HSERMETANA-PWY]], L-methionine biosynthesis III:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115916
+
* METANETX-RXN : MNXR115965
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23938 23938]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11173 11173]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01740 R01740]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P50199 P50199]
+
** [http://www.uniprot.org/uniprot/Q57195 Q57195]
−
{{#set: common-name=5-keto-d-gluconate 5-reductase}}
+
** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6]
−
{{#set: ec-number=ec-1.1.1.69}}
+
** [http://www.uniprot.org/uniprot/O33259 O33259]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/Q55786 Q55786]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/Q09582 Q09582]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4]
 +
** [http://www.uniprot.org/uniprot/P13009 P13009]
 +
{{#set: common-name=methionine synthase}}
 +
{{#set: ec-number=ec-2.1.1.13}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=7}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:37, 17 March 2021

Reaction HOMOCYSMETB12-RXN

  • common-name:
    • methionine synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2201, folate transformations I:
    • 12 reactions found over 10 reactions in the full pathway
  • ADENOSYLHOMOCYSCAT-PWY, L-methionine salvage from L-homocysteine:
    • 1 reactions found over 3 reactions in the full pathway
  • 1CMET2-PWY, folate transformations III (E. coli):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7977, L-methionine biosynthesis IV:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3841, folate transformations II (plants):
    • 10 reactions found over 11 reactions in the full pathway
  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
    • 5 reactions found over 5 reactions in the full pathway
  • HSERMETANA-PWY, L-methionine biosynthesis III:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=HOMOCYSMETB12-RXN&oldid=50522"