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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction DADPKIN-RXN == | + | == Reaction RXN-16082 == |
| − | * common-name:
| |
| − | ** dadp kinase
| |
| − | ** nucleoside diphosphate kinase
| |
| − | * ec-number:
| |
| − | ** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
| |
| | * direction: | | * direction: |
| | ** left-to-right | | ** left-to-right |
| | + | * ec_number: |
| | + | ** ec-2.3.1 |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[ATP]][c] '''+''' 1 [[DADP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DATP]][c] | + | * 1 [[CPD-14426]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17332]][c] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * Gene: [[E_subulatus_11037]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11039]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_19892]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_25805]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11363]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03750]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[E_subulatus_24493]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_15295]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11361]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13578]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03752]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13577]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_19894]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03631]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_23205]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11362]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03563]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17017]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17018]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13580]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13579]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_19893]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17015]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03751]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11038]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17016]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03562]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | </div>
| |
| | == Pathway(s) == | | == Pathway(s) == |
| − | * [[PWY-7224]], purine deoxyribonucleosides salvage: | + | * [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): |
| − | ** '''4''' reactions found over '''6''' reactions in the full pathway
| + | ** '''14''' reactions found over '''14''' reactions in the full pathway |
| − | * [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis:
| |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II:
| |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway | |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | + | * category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation |
| − | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
| |
| | == External links == | | == External links == |
| − | * METANETX-RXN : MNXR101940 | + | * METANETX-RXN : MNXR119830 |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27675 27675]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01137 R01137]
| |
| − | {{#set: common-name=nucleoside diphosphate kinase|dadp kinase}}
| |
| − | {{#set: ec-number=ec-2.7.4.6}}
| |
| | {{#set: direction=left-to-right}} | | {{#set: direction=left-to-right}} |
| − | {{#set: nb gene associated=27}} | + | {{#set: ec_number=ec-2.3.1}} |
| − | {{#set: nb pathway associated=3}} | + | {{#set: nb gene associated=0}} |
| − | {{#set: reconstruction category=annotation|orthology}} | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: reconstruction comment=n.a}} | + | {{#set: reconstruction tool=curation}} |
| − | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} | + | {{#set: reconstruction comment=annotation}} |
| | + | {{#set: reconstruction source=esub_adding_annot_form}} |
