Difference between revisions of "RXN-11486"

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(Created page with "Category:reaction == Reaction RXN-14809 == * direction: ** reversible == Reaction formula == * 1 L-arabinofuranose[c] '''<=>''' 1 L-arabinopyranose[c] == Gene(s) a...")
(Created page with "Category:reaction == Reaction RXN-11486 == * common-name: ** geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase * ec-number: ** [http://enzyme.expasy.org...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14809 ==
+
== Reaction RXN-11486 ==
 +
* common-name:
 +
** geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.85 ec-2.5.1.85]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-arabinofuranose]][c] '''<=>''' 1 [[L-arabinopyranose]][c]
+
* 5 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-21340]][c] '''+''' 5 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_01544]]
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** Category: [[annotation]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[E_subulatus_24160]]
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** Category: [[annotation]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[E_subulatus_01545]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_01543]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_01546]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* 1 [[L-arabinofuranose]][c] '''<=>''' 1 [[L-arabinopyranose]][c]
+
* [[PWY-6520]], nonaprenyl diphosphate biosynthesis II:
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** '''1''' reactions found over '''6''' reactions in the full pathway
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** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
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{{#set: direction=reversible}}
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* METANETX-RXN : MNXR112686
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{{#set: nb gene associated=0}}
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* RHEA:
−
{{#set: nb pathway associated=2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27595 27595]
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{{#set: reconstruction category=manual}}
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* LIGAND-RXN:
−
{{#set: reconstruction tool=curation}}
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** [http://www.genome.jp/dbget-bin/www_bget?R09251 R09251]
−
{{#set: reconstruction comment=annotation}}
+
{{#set: common-name=geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
{{#set: ec-number=ec-2.5.1.85}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=5}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-11486

  • common-name:
    • geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6520, nonaprenyl diphosphate biosynthesis II:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR112686
  • RHEA:
  • LIGAND-RXN:





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