Difference between revisions of "RXN-11486"
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(Created page with "Category:reaction == Reaction RXN-14192 == * common-name: ** pyruvate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.40 ec-2.7.1.40] * direction: ** left-to-rig...") |
(Created page with "Category:reaction == Reaction RXN-11486 == * common-name: ** geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase * ec-number: ** [http://enzyme.expasy.org...") |
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| (One intermediate revision by one other user not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN- | + | == Reaction RXN-11486 == |
* common-name: | * common-name: | ||
| − | ** | + | ** geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.5.1.85 ec-2.5.1.85] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
| − | * | + | * 5 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-21340]][c] '''+''' 5 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[E_subulatus_01544]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[E_subulatus_24160]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * Gene: [[ | + | * Gene: [[E_subulatus_01545]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[E_subulatus_01543]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[E_subulatus_01546]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6520]], nonaprenyl diphosphate biosynthesis II: | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * METANETX-RXN : | + | * METANETX-RXN : MNXR112686 |
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27595 27595] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R09251 R09251] |
| − | {{#set: common-name= | + | {{#set: common-name=geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase}} |
| − | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-2.5.1.85}} |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=5}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=ectocarpus_subulatus}} | {{#set: reconstruction source=ectocarpus_subulatus}} | ||
Latest revision as of 19:38, 17 March 2021
Contents
Reaction RXN-11486
- common-name:
- geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase
- ec-number:
- direction:
- left-to-right
Reaction formula
- 5 DELTA3-ISOPENTENYL-PP[c] + 1 GERANYLGERANYL-PP[c] => 1 CPD-21340[c] + 5 PPI[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_01544
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_24160
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_01545
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_01543
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_01546
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6520, nonaprenyl diphosphate biosynthesis II:
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links
