Difference between revisions of "6.2.1.34-RXN"

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(Created page with "Category:reaction == Reaction RXN-9651 == * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase ** 3-oxo-decanoyl-[acyl-carrier protein] synthase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction 6.2.1.34-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.34 ec-6.2.1.34] * direction: ** left-to-right == Reaction formula == * 1 [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-9651 ==
+
== Reaction 6.2.1.34-RXN ==
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* common-name:
 
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** 3-oxoacyl-[acyl-carrier-protein] synthase
 
−
** 3-oxo-decanoyl-[acyl-carrier protein] synthase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/6.2.1.34 ec-6.2.1.34]
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** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
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** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[MALONYL-COA]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-decanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[FERULIC-ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[E_subulatus_21143]]
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* Gene: [[E_subulatus_13004]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_13006]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_08948]]
 
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** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_15038]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_22266]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_15037]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_22265]]
 
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** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_13005]]
 
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** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* [[PWY-1121]], suberin monomers biosynthesis:
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** '''30''' reactions found over '''31''' reactions in the full pathway
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** '''7''' reactions found over '''20''' reactions in the full pathway
 +
* [[PWY-6343]], ferulate degradation:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=3-oxo-decanoyl-[acyl-carrier protein] synthase|3-oxoacyl-[acyl-carrier-protein] synthase}}
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* METANETX-RXN : MNXR99582
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{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.86|ec-2.3.1.85}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36252 36252]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02194 R02194]
 +
{{#set: ec-number=ec-6.2.1.34}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=8}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:38, 17 March 2021

Reaction 6.2.1.34-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-1121, suberin monomers biosynthesis:
    • 7 reactions found over 20 reactions in the full pathway
  • PWY-6343, ferulate degradation:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR99582
  • RHEA:
  • LIGAND-RXN:





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