Difference between revisions of "AMP-DEPHOSPHORYLATION-RXN"
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(Created page with "Category:reaction == Reaction RXN-6381 == * common-name: ** diamine oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.3.22 ec-1.4.3.22] * direction: ** left-to-righ...") |
(Created page with "Category:reaction == Reaction AMP-DEPHOSPHORYLATION-RXN == * common-name: ** 5'-nucleotidase ** amp phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction AMP-DEPHOSPHORYLATION-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** 5'-nucleotidase |
+ | ** amp phosphatase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1 | + | ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_13217]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_17314]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[E_subulatus_10902]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_17477]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_17313]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_10901]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | + | * Gene: [[E_subulatus_02465]] | |
− | |||
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_02463]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_02464]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
</div> | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * | + | * [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: |
− | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
− | * | + | * METANETX-RXN : MNXR102037 |
− | * | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29376 29376] |
− | {{#set: ec-number=ec-1 | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00183 R00183] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P06196 P06196] | ||
+ | ** [http://www.uniprot.org/uniprot/P21588 P21588] | ||
+ | ** [http://www.uniprot.org/uniprot/O34313 O34313] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44] | ||
+ | ** [http://www.uniprot.org/uniprot/O29385 O29385] | ||
+ | ** [http://www.uniprot.org/uniprot/P44569 P44569] | ||
+ | ** [http://www.uniprot.org/uniprot/O83142 O83142] | ||
+ | ** [http://www.uniprot.org/uniprot/P49902 P49902] | ||
+ | ** [http://www.uniprot.org/uniprot/P22848 P22848] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05927 Q05927] | ||
+ | ** [http://www.uniprot.org/uniprot/P21589 P21589] | ||
+ | ** [http://www.uniprot.org/uniprot/P29240 P29240] | ||
+ | ** [http://www.uniprot.org/uniprot/P07024 P07024] | ||
+ | {{#set: common-name=5'-nucleotidase|amp phosphatase}} | ||
+ | {{#set: ec-number=ec-3.1.3.5}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=9}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=ectocarpus_subulatus}} |
Latest revision as of 19:38, 17 March 2021
Contents
Reaction AMP-DEPHOSPHORYLATION-RXN
- common-name:
- 5'-nucleotidase
- amp phosphatase
- ec-number:
- direction:
- left-to-right
Reaction formula
Gene(s) associated with this reaction
- Gene: E_subulatus_13217
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_17314
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_10902
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_17477
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_17313
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_10901
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_02465
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_02463
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_02464
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- SALVADEHYPOX-PWY, adenosine nucleotides degradation II:
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR102037
- RHEA:
- LIGAND-RXN:
- UNIPROT: