Difference between revisions of "FORMATETHFLIG-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 4-COUMARATE--COA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.12 ec-6.2.1.12] * direction: ** left-to-right == Reaction f...")
(Created page with "Category:reaction == Reaction FORMATETHFLIG-RXN == * common-name: ** formate:tetrahydropteroylpolyglutamate ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.3 ec-...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 4-COUMARATE--COA-LIGASE-RXN ==
+
== Reaction FORMATETHFLIG-RXN ==
 +
* common-name:
 +
** formate:tetrahydropteroylpolyglutamate ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.12 ec-6.2.1.12]
+
** [http://enzyme.expasy.org/EC/6.3.4.3 ec-6.3.4.3]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[COUMARATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_21143]]
+
* Gene: [[E_subulatus_18694]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_18693]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-2161]], folate polyglutamylation:
−
* [[PWY-5048]], rosmarinic acid biosynthesis I:
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
 
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7897]], flavonoid di-C-glucosylation:
+
* [[PWY-2201]], folate transformations I:
−
** '''3''' reactions found over '''15''' reactions in the full pathway
+
** '''12''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-8002]], 4-coumarate degradation (aerobic):
+
* [[PWY-3841]], folate transformations II (plants):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7046]], 4-coumarate degradation (anaerobic):
+
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6982]], umbelliferone biosynthesis:
+
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7398]], coumarins biosynthesis (engineered):
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-6320]], phaselate biosynthesis:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-361]], phenylpropanoid biosynthesis:
 
−
** '''6''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-7397]], naringenin biosynthesis (engineered):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6435]], 4-hydroxybenzoate biosynthesis III (plants):
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5135]], xanthohumol biosynthesis:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered):
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR115886
−
* METANETX-RXN : MNXR94998
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19642 19642]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20224 20224]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01616 R01616]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00943 R00943]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P31684 P31684]
+
** [http://www.uniprot.org/uniprot/P09440 P09440]
−
** [http://www.uniprot.org/uniprot/P31685 P31685]
+
** [http://www.uniprot.org/uniprot/P13419 P13419]
−
** [http://www.uniprot.org/uniprot/Q9SWH8 Q9SWH8]
+
** [http://www.uniprot.org/uniprot/P07245 P07245]
−
** [http://www.uniprot.org/uniprot/Q9SWH7 Q9SWH7]
+
** [http://www.uniprot.org/uniprot/P11586 P11586]
−
** [http://www.uniprot.org/uniprot/P17814 P17814]
+
** [http://www.uniprot.org/uniprot/P21164 P21164]
−
** [http://www.uniprot.org/uniprot/P31687 P31687]
+
** [http://www.uniprot.org/uniprot/P28723 P28723]
−
** [http://www.uniprot.org/uniprot/Q8S5C2 Q8S5C2]
+
** [http://www.uniprot.org/uniprot/Q9JVY8 Q9JVY8]
−
** [http://www.uniprot.org/uniprot/P14912 P14912]
+
** [http://www.uniprot.org/uniprot/Q9CH07 Q9CH07]
−
** [http://www.uniprot.org/uniprot/P14913 P14913]
+
** [http://www.uniprot.org/uniprot/Q07064 Q07064]
−
** [http://www.uniprot.org/uniprot/P31686 P31686]
+
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
−
** [http://www.uniprot.org/uniprot/Q42524 Q42524]
+
{{#set: common-name=formate:tetrahydropteroylpolyglutamate ligase}}
−
** [http://www.uniprot.org/uniprot/Q42943 Q42943]
+
{{#set: ec-number=ec-6.3.4.3}}
−
** [http://www.uniprot.org/uniprot/Q42982 Q42982]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P93360 P93360]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/P93361 P93361]
+
{{#set: nb pathway associated=5}}
−
** [http://www.uniprot.org/uniprot/O24146 O24146]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/O48868 O48868]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/O48869 O48869]
 
−
** [http://www.uniprot.org/uniprot/O81139 O81139]
 
−
** [http://www.uniprot.org/uniprot/O81140 O81140]
 
−
** [http://www.uniprot.org/uniprot/P41636 P41636]
 
−
</div>
 
−
{{#set: ec-number=ec-6.2.1.12}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=13}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction FORMATETHFLIG-RXN

  • common-name:
    • formate:tetrahydropteroylpolyglutamate ligase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2161, folate polyglutamylation:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-2201, folate transformations I:
    • 12 reactions found over 10 reactions in the full pathway
  • PWY-3841, folate transformations II (plants):
    • 10 reactions found over 11 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=FORMATETHFLIG-RXN&oldid=50736"