Difference between revisions of "RXN0-2044"

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(Created page with "Category:reaction == Reaction FORMATETHFLIG-RXN == * common-name: ** formate:tetrahydropteroylpolyglutamate ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.3 ec-...")
(Created page with "Category:reaction == Reaction RXN0-2044 == * common-name: ** 3-hydroxyadipyl-coa dehydrogenase ** 3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction FORMATETHFLIG-RXN ==
+
== Reaction RXN0-2044 ==
 
* common-name:
 
* common-name:
** formate:tetrahydropteroylpolyglutamate ligase
+
** 3-hydroxyadipyl-coa dehydrogenase
 +
** 3-hydroxyacyl-coa dehydrogenase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.3.4.3 ec-6.3.4.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[3-HYDROXYADIPYL-COA]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-KETO-ADIPYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_18694]]
+
* Gene: [[E_subulatus_04640]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[E_subulatus_18693]]
+
* Gene: [[E_subulatus_02116]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-1361]], benzoyl-CoA degradation I (aerobic):
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY0-321]], phenylacetate degradation I (aerobic):
** '''12''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
** '''12''' reactions found over '''12''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* DB : UNIPROT
+
* METANETX-RXN : MNXR100555
* ID : P21164
+
* RHEA:
{{#set: common-name=formate:tetrahydropteroylpolyglutamate ligase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34854 34854]
{{#set: ec-number=ec-6.3.4.3}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06941 R06941]
 +
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase|3-hydroxyadipyl-coa dehydrogenase}}
 +
{{#set: ec-number=ec-1.1.1.35}}
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN0-2044

  • common-name:
    • 3-hydroxyadipyl-coa dehydrogenase
    • 3-hydroxyacyl-coa dehydrogenase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-1361, benzoyl-CoA degradation I (aerobic):
    • 2 reactions found over 7 reactions in the full pathway
  • PWY0-321, phenylacetate degradation I (aerobic):
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100555
  • RHEA:
  • LIGAND-RXN: