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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction RXN0-722 == | + | == Reaction RXN-2881 == |
| − | * common-name:
| |
| − | ** 2'-deoxyuridine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidoreductase
| |
| − | ** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
| |
| − | * ec-number:
| |
| − | ** [http://enzyme.expasy.org/EC/1.17.4.1 ec-1.17.4.1]
| |
| | * direction: | | * direction: |
| | ** left-to-right | | ** left-to-right |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[Reduced-NrdH-Proteins]][c] '''+''' 1 [[UDP]][c] '''=>''' 1 [[DUDP]][c] '''+''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[WATER]][c] | + | * 1 [[FORMALDEHYDE]][c] '''+''' 1 [[THF-GLU-N]][c] '''=>''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * Gene: [[E_subulatus_16361]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_20464]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_18208]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_17312]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_17309]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_16358]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_07744]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_16359]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_15977]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_11791]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | * Gene: [[E_subulatus_17310]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_20465]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_15745]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_15746]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_25205]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_20463]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_16362]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_16360]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_16363]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_25204]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_17311]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[E_subulatus_07745]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | </div>
| |
| | == Pathway(s) == | | == Pathway(s) == |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | + | * [[PWY-1622]], formaldehyde assimilation I (serine pathway): |
| − | ** '''12''' reactions found over '''13''' reactions in the full pathway | + | ** '''6''' reactions found over '''13''' reactions in the full pathway |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | + | * category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation |
| | == External links == | | == External links == |
| − | {{#set: common-name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor|2'-deoxyuridine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidoreductase}}
| + | * METANETX-RXN : MNXR121639 |
| − | {{#set: ec-number=ec-1.17.4.1}}
| + | * LIGAND-RXN: |
| | + | ** [http://www.genome.jp/dbget-bin/www_bget?R09093 R09093] |
| | {{#set: direction=left-to-right}} | | {{#set: direction=left-to-right}} |
| − | {{#set: nb gene associated=22}} | + | {{#set: nb gene associated=0}} |
| | {{#set: nb pathway associated=1}} | | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=curation}} |
| − | {{#set: reconstruction comment=n.a}} | + | {{#set: reconstruction comment=annotation}} |
| − | {{#set: reconstruction source=ectocarpus_subulatus}} | + | {{#set: reconstruction source=esub_adding_annot_form}} |
