Difference between revisions of "ATP-CITRATE-PRO-S--LYASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction PREPHENATEDEHYDROG-RXN == * common-name: ** prephenate dehydrogenase (nad+) * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.12 ec-1.3.1.12...")
(Created page with "Category:reaction == Reaction ATP-CITRATE-PRO-S--LYASE-RXN == * common-name: ** atp-citrate synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.3.8 ec-2.3.3.8] * dir...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PREPHENATEDEHYDROG-RXN ==
+
== Reaction ATP-CITRATE-PRO-S--LYASE-RXN ==
 
* common-name:
 
* common-name:
−
** prephenate dehydrogenase (nad+)
+
** atp-citrate synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.12 ec-1.3.1.12]
+
** [http://enzyme.expasy.org/EC/2.3.3.8 ec-2.3.3.8]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[PREPHENATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CIT]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_13405]]
+
* Gene: [[E_subulatus_12371]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_07858]]
+
* Gene: [[E_subulatus_17383]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_07857]]
+
* Gene: [[E_subulatus_17381]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_13406]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_17382]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_08604]]
+
* Gene: [[E_subulatus_00867]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TYRSYN]], L-tyrosine biosynthesis I:
+
* [[P23-PWY]], reductive TCA cycle I:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''9''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-7303]], 3-dimethylallyl-4-hydroxybenzoate biosynthesis:
+
* [[PWY-5172]], acetyl-CoA biosynthesis from citrate:
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR103121
+
* METANETX-RXN : MNXR95268
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13870 13870]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21162 21162]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01728 R01728]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00352 R00352]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9CET9 Q9CET9]
+
** [http://www.uniprot.org/uniprot/P16638 P16638]
−
** [http://www.uniprot.org/uniprot/Q9PIZ7 Q9PIZ7]
+
{{#set: common-name=atp-citrate synthase}}
−
** [http://www.uniprot.org/uniprot/P43902 P43902]
+
{{#set: ec-number=ec-2.3.3.8}}
−
** [http://www.uniprot.org/uniprot/P07023 P07023]
 
−
** [http://www.uniprot.org/uniprot/Q04983 Q04983]
 
−
** [http://www.uniprot.org/uniprot/Q02287 Q02287]
 
−
** [http://www.uniprot.org/uniprot/P43901 P43901]
 
−
{{#set: common-name=prephenate dehydrogenase (nad+)}}
 
−
{{#set: ec-number=ec-1.3.1.12}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=5}}
 
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction ATP-CITRATE-PRO-S--LYASE-RXN

  • common-name:
    • atp-citrate synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P23-PWY, reductive TCA cycle I:
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-5172, acetyl-CoA biosynthesis from citrate:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=ATP-CITRATE-PRO-S--LYASE-RXN&oldid=50849"